Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89251.t1 | XP_003623199.1 | 97.5 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 2.20E-127 | 464.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89251.t1 | P32110 | 72.6 | 223 | 56 | 2 | 19 | 236 | 1 | 223 | 1.8e-85 | 317.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89251.t1 | G7L6H3 | 97.5 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 1.6e-127 | 464.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055144 | MS.gene89251 | 0.829851 | 4.09E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89251.t1 | MTR_7g065630 | 97.490 | 239 | 6 | 0 | 1 | 239 | 1 | 239 | 2.16e-173 | 476 |
| MS.gene89251.t1 | MTR_7g065680 | 83.710 | 221 | 36 | 0 | 19 | 239 | 1 | 221 | 4.00e-129 | 364 |
| MS.gene89251.t1 | MTR_7g065710 | 78.325 | 203 | 44 | 0 | 26 | 228 | 5 | 207 | 4.40e-118 | 336 |
| MS.gene89251.t1 | MTR_7g065700 | 80.000 | 210 | 42 | 0 | 19 | 228 | 1 | 210 | 1.25e-116 | 332 |
| MS.gene89251.t1 | MTR_7g065590 | 68.018 | 222 | 67 | 1 | 19 | 236 | 1 | 222 | 4.91e-110 | 316 |
| MS.gene89251.t1 | MTR_7g065230 | 71.560 | 218 | 61 | 1 | 19 | 236 | 1 | 217 | 6.08e-108 | 310 |
| MS.gene89251.t1 | MTR_7g065600 | 68.018 | 222 | 67 | 1 | 19 | 236 | 1 | 222 | 4.02e-106 | 306 |
| MS.gene89251.t1 | MTR_7g065660 | 66.667 | 225 | 71 | 1 | 19 | 239 | 1 | 225 | 1.60e-105 | 304 |
| MS.gene89251.t1 | MTR_7g065720 | 68.778 | 221 | 64 | 2 | 19 | 234 | 1 | 221 | 4.65e-104 | 300 |
| MS.gene89251.t1 | MTR_7g065290 | 67.123 | 219 | 68 | 1 | 19 | 233 | 1 | 219 | 1.82e-103 | 299 |
| MS.gene89251.t1 | MTR_7g065265 | 66.972 | 218 | 68 | 1 | 19 | 232 | 1 | 218 | 5.54e-100 | 290 |
| MS.gene89251.t1 | MTR_7g065740 | 62.832 | 226 | 79 | 2 | 19 | 239 | 1 | 226 | 2.71e-99 | 288 |
| MS.gene89251.t1 | MTR_7g065750 | 63.717 | 226 | 77 | 2 | 19 | 239 | 1 | 226 | 4.74e-97 | 283 |
| MS.gene89251.t1 | MTR_7g065270 | 63.761 | 218 | 75 | 1 | 19 | 232 | 1 | 218 | 1.29e-96 | 281 |
| MS.gene89251.t1 | MTR_7g065640 | 63.348 | 221 | 67 | 1 | 19 | 239 | 1 | 207 | 1.83e-95 | 278 |
| MS.gene89251.t1 | MTR_4g019790 | 60.000 | 225 | 86 | 1 | 19 | 239 | 1 | 225 | 9.40e-93 | 272 |
| MS.gene89251.t1 | MTR_7g065260 | 64.732 | 224 | 74 | 2 | 18 | 236 | 7 | 230 | 2.98e-92 | 271 |
| MS.gene89251.t1 | MTR_4g019780 | 60.731 | 219 | 80 | 3 | 18 | 231 | 1 | 218 | 5.70e-91 | 267 |
| MS.gene89251.t1 | MTR_6g080440 | 47.596 | 208 | 103 | 3 | 25 | 227 | 3 | 209 | 6.62e-62 | 193 |
| MS.gene89251.t1 | MTR_3g099757 | 47.748 | 222 | 110 | 3 | 22 | 238 | 2 | 222 | 7.24e-61 | 191 |
| MS.gene89251.t1 | MTR_8g087410 | 42.534 | 221 | 121 | 3 | 24 | 239 | 5 | 224 | 3.68e-57 | 181 |
| MS.gene89251.t1 | MTR_5g040430 | 40.541 | 222 | 120 | 4 | 19 | 229 | 1 | 221 | 3.29e-55 | 176 |
| MS.gene89251.t1 | MTR_8g087425 | 43.119 | 218 | 118 | 3 | 22 | 234 | 2 | 218 | 5.49e-55 | 176 |
| MS.gene89251.t1 | MTR_1g090070 | 42.534 | 221 | 120 | 2 | 25 | 238 | 9 | 229 | 5.85e-55 | 176 |
| MS.gene89251.t1 | MTR_1g090150 | 43.636 | 220 | 115 | 4 | 24 | 236 | 2 | 219 | 1.94e-54 | 174 |
| MS.gene89251.t1 | MTR_1g090060 | 40.271 | 221 | 120 | 4 | 25 | 236 | 3 | 220 | 1.08e-50 | 165 |
| MS.gene89251.t1 | MTR_1g115195 | 41.014 | 217 | 117 | 5 | 25 | 232 | 3 | 217 | 2.11e-48 | 159 |
| MS.gene89251.t1 | MTR_1g090100 | 40.278 | 216 | 121 | 3 | 26 | 234 | 3 | 217 | 2.62e-48 | 159 |
| MS.gene89251.t1 | MTR_4g059730 | 39.535 | 215 | 118 | 4 | 24 | 229 | 3 | 214 | 3.70e-48 | 158 |
| MS.gene89251.t1 | MTR_5g037380 | 40.444 | 225 | 122 | 4 | 22 | 234 | 2 | 226 | 5.05e-47 | 155 |
| MS.gene89251.t1 | MTR_2g070130 | 40.488 | 205 | 113 | 5 | 24 | 222 | 3 | 204 | 3.49e-45 | 150 |
| MS.gene89251.t1 | MTR_1g090090 | 39.713 | 209 | 118 | 3 | 25 | 226 | 3 | 210 | 9.91e-45 | 149 |
| MS.gene89251.t1 | MTR_2g070150 | 39.512 | 205 | 115 | 5 | 24 | 222 | 3 | 204 | 7.99e-44 | 147 |
| MS.gene89251.t1 | MTR_4g124130 | 45.789 | 190 | 93 | 6 | 23 | 205 | 2 | 188 | 2.06e-42 | 144 |
| MS.gene89251.t1 | MTR_2g070210 | 38.863 | 211 | 118 | 6 | 24 | 226 | 3 | 210 | 4.85e-42 | 142 |
| MS.gene89251.t1 | MTR_8g061950 | 39.545 | 220 | 121 | 5 | 22 | 229 | 2 | 221 | 5.56e-42 | 143 |
| MS.gene89251.t1 | MTR_3g467420 | 40.284 | 211 | 121 | 5 | 20 | 226 | 4 | 213 | 3.99e-41 | 140 |
| MS.gene89251.t1 | MTR_2g070140 | 37.949 | 195 | 112 | 5 | 38 | 226 | 1 | 192 | 5.73e-41 | 139 |
| MS.gene89251.t1 | MTR_8g056940 | 45.161 | 186 | 97 | 5 | 24 | 205 | 3 | 187 | 5.95e-41 | 140 |
| MS.gene89251.t1 | MTR_2g070120 | 37.931 | 203 | 121 | 4 | 24 | 222 | 3 | 204 | 1.09e-40 | 139 |
| MS.gene89251.t1 | MTR_2g070180 | 37.561 | 205 | 119 | 5 | 24 | 222 | 3 | 204 | 4.55e-40 | 137 |
| MS.gene89251.t1 | MTR_2g070200 | 38.462 | 208 | 123 | 5 | 24 | 226 | 3 | 210 | 5.71e-40 | 137 |
| MS.gene89251.t1 | MTR_2g070070 | 37.327 | 217 | 127 | 5 | 25 | 235 | 4 | 217 | 1.23e-38 | 134 |
| MS.gene89251.t1 | MTR_3g467430 | 37.441 | 211 | 123 | 5 | 22 | 226 | 6 | 213 | 3.16e-38 | 133 |
| MS.gene89251.t1 | MTR_2g070060 | 37.981 | 208 | 118 | 6 | 25 | 226 | 4 | 206 | 2.06e-37 | 130 |
| MS.gene89251.t1 | MTR_5g076900 | 39.130 | 207 | 121 | 5 | 24 | 226 | 5 | 210 | 3.06e-37 | 130 |
| MS.gene89251.t1 | MTR_0186s0030 | 47.826 | 138 | 70 | 2 | 24 | 160 | 3 | 139 | 2.74e-35 | 122 |
| MS.gene89251.t1 | MTR_2g070110 | 37.327 | 217 | 126 | 6 | 25 | 235 | 4 | 216 | 4.63e-35 | 124 |
| MS.gene89251.t1 | MTR_2g072120 | 40.580 | 69 | 39 | 2 | 69 | 136 | 2 | 69 | 1.71e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89251.t1 | AT2G29420 | 46.637 | 223 | 113 | 3 | 21 | 238 | 5 | 226 | 6.17e-68 | 209 |
| MS.gene89251.t1 | AT3G09270 | 49.321 | 221 | 104 | 5 | 23 | 236 | 4 | 223 | 1.13e-64 | 201 |
| MS.gene89251.t1 | AT2G29450 | 43.694 | 222 | 119 | 3 | 21 | 236 | 2 | 223 | 5.30e-58 | 184 |
| MS.gene89251.t1 | AT2G29490 | 44.889 | 225 | 115 | 5 | 19 | 236 | 1 | 223 | 2.73e-56 | 179 |
| MS.gene89251.t1 | AT2G29460 | 45.089 | 224 | 116 | 4 | 19 | 236 | 1 | 223 | 3.17e-56 | 179 |
| MS.gene89251.t1 | AT2G29480 | 45.089 | 224 | 113 | 5 | 19 | 233 | 1 | 223 | 2.68e-55 | 177 |
| MS.gene89251.t1 | AT2G29440 | 42.342 | 222 | 121 | 4 | 21 | 236 | 2 | 222 | 2.55e-52 | 169 |
| MS.gene89251.t1 | AT2G29470 | 43.056 | 216 | 115 | 5 | 19 | 227 | 1 | 215 | 7.49e-52 | 168 |
| MS.gene89251.t1 | AT1G59670 | 43.750 | 224 | 111 | 7 | 24 | 232 | 5 | 228 | 3.64e-49 | 161 |
| MS.gene89251.t1 | AT1G59700 | 44.348 | 230 | 113 | 7 | 24 | 238 | 5 | 234 | 4.21e-48 | 159 |
| MS.gene89251.t1 | AT1G10370 | 44.131 | 213 | 102 | 7 | 19 | 218 | 1 | 209 | 1.67e-47 | 157 |
| MS.gene89251.t1 | AT1G27130 | 41.441 | 222 | 118 | 6 | 21 | 230 | 2 | 223 | 5.36e-47 | 155 |
| MS.gene89251.t1 | AT1G69930 | 40.789 | 228 | 117 | 7 | 17 | 228 | 2 | 227 | 5.55e-46 | 153 |
| MS.gene89251.t1 | AT1G27140 | 38.326 | 227 | 123 | 5 | 21 | 232 | 2 | 226 | 3.09e-45 | 151 |
| MS.gene89251.t1 | AT1G78320 | 41.262 | 206 | 112 | 5 | 23 | 222 | 2 | 204 | 1.53e-44 | 149 |
| MS.gene89251.t1 | AT1G78340 | 49.677 | 155 | 75 | 3 | 24 | 176 | 3 | 156 | 2.52e-43 | 146 |
| MS.gene89251.t1 | AT1G17180 | 42.365 | 203 | 112 | 5 | 24 | 222 | 3 | 204 | 3.63e-43 | 145 |
| MS.gene89251.t1 | AT1G10360 | 40.670 | 209 | 111 | 6 | 22 | 218 | 2 | 209 | 3.73e-43 | 145 |
| MS.gene89251.t1 | AT1G78370 | 39.901 | 203 | 117 | 5 | 28 | 226 | 7 | 208 | 1.27e-41 | 141 |
| MS.gene89251.t1 | AT5G62480 | 37.719 | 228 | 126 | 6 | 23 | 235 | 6 | 232 | 4.52e-41 | 140 |
| MS.gene89251.t1 | AT1G78380 | 40.196 | 204 | 113 | 5 | 25 | 222 | 4 | 204 | 9.19e-41 | 139 |
| MS.gene89251.t1 | AT1G17170 | 38.073 | 218 | 125 | 5 | 24 | 235 | 3 | 216 | 1.40e-40 | 139 |
| MS.gene89251.t1 | AT1G53680 | 38.863 | 211 | 124 | 5 | 19 | 224 | 1 | 211 | 5.11e-39 | 135 |
| MS.gene89251.t1 | AT1G69920 | 36.967 | 211 | 121 | 5 | 21 | 219 | 30 | 240 | 1.21e-38 | 135 |
| MS.gene89251.t1 | AT1G17190 | 37.799 | 209 | 125 | 5 | 22 | 226 | 2 | 209 | 1.69e-37 | 131 |
| MS.gene89251.t1 | AT3G43800 | 38.350 | 206 | 118 | 7 | 22 | 219 | 2 | 206 | 2.52e-37 | 130 |
| MS.gene89251.t1 | AT1G78360 | 38.532 | 218 | 115 | 8 | 19 | 226 | 1 | 209 | 3.25e-37 | 130 |
| MS.gene89251.t1 | AT1G74590 | 33.636 | 220 | 135 | 4 | 19 | 228 | 1 | 219 | 1.06e-34 | 124 |
| MS.gene89251.t1 | AT1G78320 | 33.659 | 205 | 102 | 5 | 23 | 222 | 2 | 177 | 5.91e-28 | 105 |
| MS.gene89251.t1 | AT5G62480 | 29.956 | 227 | 119 | 6 | 23 | 235 | 6 | 206 | 2.50e-23 | 94.0 |
| MS.gene89251.t1 | AT5G62480 | 29.956 | 227 | 118 | 6 | 23 | 235 | 6 | 205 | 3.08e-23 | 94.0 |
| MS.gene89251.t1 | AT2G02380 | 27.143 | 210 | 138 | 7 | 23 | 220 | 9 | 215 | 1.02e-11 | 62.8 |
Find 46 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATACAATCCAGTTTAC+AGG | 0.242467 | 7.1:-36936938 | MS.gene89251:CDS |
| AAAGAGCTTTGGCTCGTTTC+TGG | 0.246122 | 7.1:-36936803 | MS.gene89251:CDS |
| GGCATAATTTCCTTGACTAT+TGG | 0.252367 | 7.1:+36936295 | None:intergenic |
| TCTGCTACTTCTTGGAATAA+AGG | 0.300241 | 7.1:+36936385 | None:intergenic |
| GAATTGAAGGGAAAATTCTT+TGG | 0.311076 | 7.1:-36936451 | MS.gene89251:CDS |
| TTACTCCATTTGTATAGCTT+TGG | 0.321457 | 7.1:+36936334 | None:intergenic |
| TTTCTCGCGTTCTTTCTTAT+CGG | 0.326801 | 7.1:+36936516 | None:intergenic |
| ACTGCAACTCTGCTACTTCT+TGG | 0.329911 | 7.1:+36936377 | None:intergenic |
| TAAGGATCGGAAGGCAAAAT+AGG | 0.356902 | 7.1:+36936828 | None:intergenic |
| TGAGGAAGAAGTGAAGCTTT+TGG | 0.359834 | 7.1:-36937069 | MS.gene89251:CDS |
| ACAGGAACCATCCTGTAAAC+TGG | 0.376294 | 7.1:+36936927 | None:intergenic |
| CTGCTACTTCTTGGAATAAA+GGG | 0.379143 | 7.1:+36936386 | None:intergenic |
| TTCTTTGGAGGAGAAGAGAT+TGG | 0.382580 | 7.1:-36936436 | MS.gene89251:CDS |
| TTCTCGCGTTCTTTCTTATC+GGG | 0.402746 | 7.1:+36936517 | None:intergenic |
| ATTTGAACTCTAATGACAAA+TGG | 0.412047 | 7.1:+36937032 | None:intergenic |
| CGATCCTTATCAAAGAGCTT+TGG | 0.417344 | 7.1:-36936814 | MS.gene89251:CDS |
| GGGTGTTGAATACAAATATT+CGG | 0.429695 | 7.1:-36936994 | MS.gene89251:CDS |
| TTTGAACTCTAATGACAAAT+GGG | 0.433615 | 7.1:+36937033 | None:intergenic |
| TTGCAACACTCTCTTGACTT+TGG | 0.436843 | 7.1:+36937115 | None:intergenic |
| AGCTAGCGACGAACTATTGA+AGG | 0.446209 | 7.1:-36936494 | MS.gene89251:CDS |
| CGAGCCAAAGCTCTTTGATA+AGG | 0.454417 | 7.1:+36936810 | None:intergenic |
| TCAAATTGCGCTGGAATTGA+AGG | 0.462937 | 7.1:-36937015 | MS.gene89251:CDS |
| ATTTCTTGAGAATGAATTGA+AGG | 0.482186 | 7.1:-36936464 | MS.gene89251:CDS |
| TTGAAGGGAAAATTCTTTGG+AGG | 0.490147 | 7.1:-36936448 | MS.gene89251:CDS |
| AAGAGAGTGTTGCAAGGCTA+TGG | 0.501914 | 7.1:-36937107 | MS.gene89251:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7.1:-36936860 | MS.gene89251:CDS |
| CAGAGTTGCAGTTGTTCACA+AGG | 0.505322 | 7.1:-36936366 | MS.gene89251:CDS |
| CATTAGAGTTCAAATTGCGC+TGG | 0.507403 | 7.1:-36937024 | MS.gene89251:CDS |
| AATTTCCAAAGCTATACAAA+TGG | 0.517213 | 7.1:-36936339 | MS.gene89251:CDS |
| TTTCTTGAGAATGAATTGAA+GGG | 0.518621 | 7.1:-36936463 | MS.gene89251:CDS |
| TAATTTCCTTGACTATTGGA+TGG | 0.528427 | 7.1:+36936299 | None:intergenic |
| TGGTGTGATGGCTGCATCTG+AGG | 0.543201 | 7.1:-36937087 | MS.gene89251:CDS |
| ATCAGTGTGTGGCTGCTGCA+TGG | 0.567781 | 7.1:-36936555 | MS.gene89251:intron |
| CAAATTGCGCTGGAATTGAA+GGG | 0.570885 | 7.1:-36937014 | MS.gene89251:CDS |
| CAAAGCTCTTTGATAAGGAT+CGG | 0.570944 | 7.1:+36936815 | None:intergenic |
| GTTGCAAGGCTATGGTGTGA+TGG | 0.586111 | 7.1:-36937099 | MS.gene89251:CDS |
| ATCACACGAGACTCCGAGAT+GGG | 0.589789 | 7.1:+36936885 | None:intergenic |
| GTCTAAGTTCATTGATGACA+AGG | 0.593305 | 7.1:-36936781 | MS.gene89251:intron |
| GCTCTTTGATAAGGATCGGA+AGG | 0.597711 | 7.1:+36936819 | None:intergenic |
| TGTGGCTGCTGCATGGATGT+CGG | 0.602873 | 7.1:-36936548 | MS.gene89251:CDS |
| AATCACACGAGACTCCGAGA+TGG | 0.605388 | 7.1:+36936884 | None:intergenic |
| TAACAACCATCCAATAGTCA+AGG | 0.609813 | 7.1:-36936305 | MS.gene89251:CDS |
| ATACAATCCAGTTTACAGGA+TGG | 0.639625 | 7.1:-36936934 | MS.gene89251:CDS |
| TCATAATGGAAATCCCATCT+CGG | 0.646463 | 7.1:-36936898 | MS.gene89251:CDS |
| AGAGTTGCAGTTGTTCACAA+GGG | 0.660025 | 7.1:-36936365 | MS.gene89251:CDS |
| AAAGTCAAGAGAGTGTTGCA+AGG | 0.691124 | 7.1:-36937113 | MS.gene89251:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTCGGAAGAAAAATT+GGG | - | chr7.1:36936381-36936400 | MS.gene89251:CDS | 20.0% |
| ! | AATTTCCAAAGCTATACAAA+TGG | - | chr7.1:36937023-36937042 | MS.gene89251:CDS | 25.0% |
| ! | ATTTCTTGAGAATGAATTGA+AGG | - | chr7.1:36936898-36936917 | MS.gene89251:CDS | 25.0% |
| ! | ATTTGAACTCTAATGACAAA+TGG | + | chr7.1:36936333-36936352 | None:intergenic | 25.0% |
| ! | CAAATATTCGGAAGAAAAAT+TGG | - | chr7.1:36936380-36936399 | MS.gene89251:CDS | 25.0% |
| ! | TTAAATACAATCCAGTTTAC+AGG | - | chr7.1:36936424-36936443 | MS.gene89251:CDS | 25.0% |
| ! | TTTCCATTATGAACAAAAAC+AGG | + | chr7.1:36936456-36936475 | None:intergenic | 25.0% |
| ! | TTTCTTGAGAATGAATTGAA+GGG | - | chr7.1:36936899-36936918 | MS.gene89251:CDS | 25.0% |
| ! | TTTGAACTCTAATGACAAAT+GGG | + | chr7.1:36936332-36936351 | None:intergenic | 25.0% |
| AAAGATGTCATAATAGACAC+TGG | + | chr7.1:36936714-36936733 | None:intergenic | 30.0% | |
| GAATTGAAGGGAAAATTCTT+TGG | - | chr7.1:36936911-36936930 | MS.gene89251:CDS | 30.0% | |
| TAATTTCCTTGACTATTGGA+TGG | + | chr7.1:36937066-36937085 | None:intergenic | 30.0% | |
| TTACTCCATTTGTATAGCTT+TGG | + | chr7.1:36937031-36937050 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | - | chr7.1:36936502-36936521 | MS.gene89251:CDS | 30.0% | |
| ! | GCAAATTGTTGATCTTTTGA+AGG | + | chr7.1:36937091-36937110 | None:intergenic | 30.0% |
| ! | TAATTTGTGAAATCAGTGTG+TGG | - | chr7.1:36936796-36936815 | MS.gene89251:CDS | 30.0% |
| !! | GGGTGTTGAATACAAATATT+CGG | - | chr7.1:36936368-36936387 | MS.gene89251:CDS | 30.0% |
| !!! | GTTCCTGTTTTTGTTCATAA+TGG | - | chr7.1:36936450-36936469 | MS.gene89251:CDS | 30.0% |
| ATACAATCCAGTTTACAGGA+TGG | - | chr7.1:36936428-36936447 | MS.gene89251:CDS | 35.0% | |
| CAAAGCTCTTTGATAAGGAT+CGG | + | chr7.1:36936550-36936569 | None:intergenic | 35.0% | |
| GGCATAATTTCCTTGACTAT+TGG | + | chr7.1:36937070-36937089 | None:intergenic | 35.0% | |
| TAACAACCATCCAATAGTCA+AGG | - | chr7.1:36937057-36937076 | MS.gene89251:CDS | 35.0% | |
| TTGAAGGGAAAATTCTTTGG+AGG | - | chr7.1:36936914-36936933 | MS.gene89251:CDS | 35.0% | |
| TTTCTCGCGTTCTTTCTTAT+CGG | + | chr7.1:36936849-36936868 | None:intergenic | 35.0% | |
| ! | CTGCTACTTCTTGGAATAAA+GGG | + | chr7.1:36936979-36936998 | None:intergenic | 35.0% |
| ! | GTCTAAGTTCATTGATGACA+AGG | - | chr7.1:36936581-36936600 | MS.gene89251:intron | 35.0% |
| ! | TCATAATGGAAATCCCATCT+CGG | - | chr7.1:36936464-36936483 | MS.gene89251:CDS | 35.0% |
| ! | TCTGCTACTTCTTGGAATAA+AGG | + | chr7.1:36936980-36936999 | None:intergenic | 35.0% |
| AGAGTTGCAGTTGTTCACAA+GGG | - | chr7.1:36936997-36937016 | MS.gene89251:CDS | 40.0% | |
| CAAATTGCGCTGGAATTGAA+GGG | - | chr7.1:36936348-36936367 | MS.gene89251:CDS | 40.0% | |
| CATTAGAGTTCAAATTGCGC+TGG | - | chr7.1:36936338-36936357 | MS.gene89251:CDS | 40.0% | |
| CGATCCTTATCAAAGAGCTT+TGG | - | chr7.1:36936548-36936567 | MS.gene89251:CDS | 40.0% | |
| TAAGGATCGGAAGGCAAAAT+AGG | + | chr7.1:36936537-36936556 | None:intergenic | 40.0% | |
| TCAAATTGCGCTGGAATTGA+AGG | - | chr7.1:36936347-36936366 | MS.gene89251:CDS | 40.0% | |
| TTCTCGCGTTCTTTCTTATC+GGG | + | chr7.1:36936848-36936867 | None:intergenic | 40.0% | |
| TTGCAACACTCTCTTGACTT+TGG | + | chr7.1:36936250-36936269 | None:intergenic | 40.0% | |
| ! | GAGGAAGAAGTGAAGCTTTT+GGG | - | chr7.1:36936294-36936313 | MS.gene89251:CDS | 40.0% |
| ! | TGAGGAAGAAGTGAAGCTTT+TGG | - | chr7.1:36936293-36936312 | MS.gene89251:CDS | 40.0% |
| ! | TTCTTTGGAGGAGAAGAGAT+TGG | - | chr7.1:36936926-36936945 | MS.gene89251:CDS | 40.0% |
| !! | AAAGTCAAGAGAGTGTTGCA+AGG | - | chr7.1:36936249-36936268 | MS.gene89251:CDS | 40.0% |
| ACAGGAACCATCCTGTAAAC+TGG | + | chr7.1:36936438-36936457 | None:intergenic | 45.0% | |
| AGCTAGCGACGAACTATTGA+AGG | - | chr7.1:36936868-36936887 | MS.gene89251:CDS | 45.0% | |
| CAGAGTTGCAGTTGTTCACA+AGG | - | chr7.1:36936996-36937015 | MS.gene89251:CDS | 45.0% | |
| CGAGCCAAAGCTCTTTGATA+AGG | + | chr7.1:36936555-36936574 | None:intergenic | 45.0% | |
| GCTCTTTGATAAGGATCGGA+AGG | + | chr7.1:36936546-36936565 | None:intergenic | 45.0% | |
| ! | AAAGAGCTTTGGCTCGTTTC+TGG | - | chr7.1:36936559-36936578 | MS.gene89251:intron | 45.0% |
| ! | ACTGCAACTCTGCTACTTCT+TGG | + | chr7.1:36936988-36937007 | None:intergenic | 45.0% |
| ! | CTTCAGATTGAAGGCATGTC+TGG | - | chr7.1:36936675-36936694 | MS.gene89251:intron | 45.0% |
| ! | GCATTGACGCTTCAGATTGA+AGG | - | chr7.1:36936666-36936685 | MS.gene89251:intron | 45.0% |
| !! | AAGAGAGTGTTGCAAGGCTA+TGG | - | chr7.1:36936255-36936274 | MS.gene89251:CDS | 45.0% |
| !!! | AGTGAAGCTTTTGGGTTCTG+TGG | - | chr7.1:36936302-36936321 | MS.gene89251:CDS | 45.0% |
| !!! | GTGAAGCTTTTGGGTTCTGT+GGG | - | chr7.1:36936303-36936322 | MS.gene89251:CDS | 45.0% |
| AATCACACGAGACTCCGAGA+TGG | + | chr7.1:36936481-36936500 | None:intergenic | 50.0% | |
| ATCACACGAGACTCCGAGAT+GGG | + | chr7.1:36936480-36936499 | None:intergenic | 50.0% | |
| GTTGCAAGGCTATGGTGTGA+TGG | - | chr7.1:36936263-36936282 | MS.gene89251:CDS | 50.0% | |
| ATCAGTGTGTGGCTGCTGCA+TGG | - | chr7.1:36936807-36936826 | MS.gene89251:CDS | 55.0% | |
| TGGTGTGATGGCTGCATCTG+AGG | - | chr7.1:36936275-36936294 | MS.gene89251:CDS | 55.0% | |
| TGTGGCTGCTGCATGGATGT+CGG | - | chr7.1:36936814-36936833 | MS.gene89251:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 36936228 | 36937156 | 36936228 | ID=MS.gene89251 |
| chr7.1 | mRNA | 36936228 | 36937156 | 36936228 | ID=MS.gene89251.t1;Parent=MS.gene89251 |
| chr7.1 | exon | 36936782 | 36937156 | 36936782 | ID=MS.gene89251.t1.exon1;Parent=MS.gene89251.t1 |
| chr7.1 | CDS | 36936782 | 36937156 | 36936782 | ID=cds.MS.gene89251.t1;Parent=MS.gene89251.t1 |
| chr7.1 | exon | 36936228 | 36936572 | 36936228 | ID=MS.gene89251.t1.exon2;Parent=MS.gene89251.t1 |
| chr7.1 | CDS | 36936228 | 36936572 | 36936228 | ID=cds.MS.gene89251.t1;Parent=MS.gene89251.t1 |
| Gene Sequence |
| Protein sequence |
