Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89330.t1 | XP_013448949.1 | 90.8 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 1.20E-236 | 828.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89330.t1 | Q9ATB4 | 55.8 | 471 | 198 | 4 | 18 | 483 | 18 | 483 | 3.7e-138 | 493.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89330.t1 | A0A072U0P5 | 90.8 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 8.6e-237 | 828.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene89330.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010619 | MS.gene89330 | PPI |
| MS.gene89330 | MS.gene68059 | PPI |
| MS.gene59465 | MS.gene89330 | PPI |
| MS.gene64762 | MS.gene89330 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89330.t1 | MTR_7g063290 | 90.554 | 487 | 46 | 0 | 1 | 487 | 1 | 487 | 0.0 | 875 |
| MS.gene89330.t1 | MTR_2g026310 | 71.881 | 537 | 80 | 8 | 18 | 487 | 19 | 551 | 0.0 | 749 |
| MS.gene89330.t1 | MTR_2g026380 | 70.276 | 508 | 117 | 6 | 1 | 487 | 1 | 495 | 0.0 | 694 |
| MS.gene89330.t1 | MTR_3g081360 | 47.656 | 512 | 217 | 8 | 17 | 483 | 4 | 509 | 1.22e-155 | 452 |
| MS.gene89330.t1 | MTR_3g082790 | 46.931 | 554 | 214 | 8 | 7 | 483 | 10 | 560 | 6.85e-153 | 447 |
| MS.gene89330.t1 | MTR_3g082790 | 47.490 | 518 | 194 | 6 | 41 | 483 | 6 | 520 | 8.35e-149 | 435 |
| MS.gene89330.t1 | MTR_3g081420 | 66.346 | 208 | 58 | 1 | 292 | 487 | 2 | 209 | 3.58e-88 | 269 |
| MS.gene89330.t1 | MTR_3g081380 | 61.728 | 162 | 60 | 1 | 18 | 177 | 16 | 177 | 2.05e-68 | 217 |
| MS.gene89330.t1 | MTR_7g062030 | 76.842 | 95 | 18 | 1 | 1 | 95 | 19 | 109 | 6.66e-38 | 135 |
| MS.gene89330.t1 | MTR_3g081390 | 62.222 | 90 | 34 | 0 | 89 | 178 | 36 | 125 | 1.60e-29 | 112 |
| MS.gene89330.t1 | MTR_3g081410 | 54.545 | 88 | 26 | 1 | 325 | 398 | 1 | 88 | 1.21e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89330.t1 | AT4G16420 | 56.751 | 474 | 192 | 6 | 18 | 485 | 18 | 484 | 0.0 | 527 |
| MS.gene89330.t1 | AT4G16420 | 56.224 | 482 | 179 | 7 | 18 | 485 | 18 | 481 | 0.0 | 527 |
| MS.gene89330.t1 | AT4G16420 | 56.639 | 482 | 181 | 8 | 18 | 485 | 18 | 485 | 0.0 | 527 |
| MS.gene89330.t1 | AT3G07740 | 44.084 | 524 | 236 | 8 | 19 | 485 | 22 | 545 | 4.48e-139 | 411 |
| MS.gene89330.t1 | AT3G07740 | 44.356 | 505 | 225 | 7 | 37 | 485 | 20 | 524 | 2.79e-138 | 409 |
| MS.gene89330.t1 | AT3G07740 | 43.503 | 531 | 236 | 9 | 19 | 485 | 22 | 552 | 1.72e-136 | 405 |
| MS.gene89330.t1 | AT3G07740 | 43.975 | 473 | 209 | 7 | 69 | 485 | 2 | 474 | 1.12e-124 | 372 |
Find 116 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTATAGGATCGTATTT+TGG | 0.104590 | 7.3:+42095035 | MS.gene89330:intron |
| AAATGTATGGCATGAATAAC+TGG | 0.272278 | 7.3:+42094534 | MS.gene89330:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7.3:-42096040 | None:intergenic |
| TTCTTCATCCGCGTTCCATT+CGG | 0.293414 | 7.3:-42094369 | None:intergenic |
| AAACGTCTGTGCTGCGAGTT+AGG | 0.293920 | 7.3:+42096218 | MS.gene89330:CDS |
| ACAGACTCCTCAAGAAATTA+TGG | 0.304851 | 7.3:+42095247 | MS.gene89330:intron |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7.3:-42095759 | None:intergenic |
| TTTGGAACCCCGCGATTGTT+TGG | 0.312150 | 7.3:-42095988 | None:intergenic |
| TCTTCATCCGCGTTCCATTC+GGG | 0.314483 | 7.3:-42094368 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7.3:+42095784 | MS.gene89330:CDS |
| AAGAAACGACGGCCCTTCTT+TGG | 0.315629 | 7.3:+42095291 | MS.gene89330:CDS |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7.3:+42096374 | MS.gene89330:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7.3:+42094631 | MS.gene89330:CDS |
| TGATACGTATCTATAATAAA+AGG | 0.333141 | 7.3:+42095446 | MS.gene89330:CDS |
| ACAAAAGCAATCATGCTTAC+AGG | 0.334147 | 7.3:+42094090 | MS.gene89330:CDS |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7.3:-42094035 | None:intergenic |
| TTGGAACCCCGCGATTGTTT+GGG | 0.353877 | 7.3:-42095987 | None:intergenic |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7.3:+42094607 | MS.gene89330:CDS |
| TACTGTAATATCGATATTAC+AGG | 0.392999 | 7.3:+42093984 | MS.gene89330:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7.3:+42096062 | MS.gene89330:CDS |
| TGAGCAATTACTCGCTGATA+TGG | 0.396386 | 7.3:+42095375 | MS.gene89330:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.397798 | 7.3:+42095901 | MS.gene89330:intron |
| ATACACCATGTCAACTTTCA+TGG | 0.399055 | 7.3:-42096348 | None:intergenic |
| GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 7.3:-42095656 | None:intergenic |
| TCCGCAGACATCAAGGCATT+TGG | 0.409190 | 7.3:-42096006 | None:intergenic |
| TGCAGGTGGAACTAACAAAA+AGG | 0.414771 | 7.3:+42095079 | MS.gene89330:CDS |
| AGTGGAGATAACTCAGAATC+TGG | 0.422645 | 7.3:+42093397 | MS.gene89330:CDS |
| TCCCTCTCATTTGCCCCGAA+TGG | 0.423686 | 7.3:+42094354 | MS.gene89330:CDS |
| TAGGACATGTCTCATGTTGT+TGG | 0.424875 | 7.3:+42094744 | MS.gene89330:intron |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7.3:+42096030 | MS.gene89330:CDS |
| CTGTCAGTGCAAATGATTGC+TGG | 0.439194 | 7.3:+42096278 | MS.gene89330:CDS |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7.3:+42094785 | MS.gene89330:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7.3:-42096039 | None:intergenic |
| TCCAATAGAGGCCGGGGAAA+AGG | 0.446039 | 7.3:+42095104 | MS.gene89330:CDS |
| CGACATATTGCCCTTTCCTC+GGG | 0.446815 | 7.3:-42095677 | None:intergenic |
| GGATTTAACACCCGAGGAAA+GGG | 0.448026 | 7.3:+42095667 | MS.gene89330:CDS |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7.3:+42095712 | MS.gene89330:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7.3:+42095941 | MS.gene89330:CDS |
| ACGACATATTGCCCTTTCCT+CGG | 0.453229 | 7.3:-42095678 | None:intergenic |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7.3:-42094013 | None:intergenic |
| AACTCAGAATCTGGAGCTGC+AGG | 0.455987 | 7.3:+42093406 | MS.gene89330:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7.3:+42094781 | MS.gene89330:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.474478 | 7.3:+42094594 | MS.gene89330:CDS |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7.3:+42093943 | MS.gene89330:CDS |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7.3:-42095957 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7.3:+42094780 | MS.gene89330:CDS |
| CCACTAGCTTCAACCAAAGA+AGG | 0.487227 | 7.3:-42095304 | None:intergenic |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7.3:-42096045 | None:intergenic |
| GAAGCATCTCATACCGGAAG+AGG | 0.499604 | 7.3:-42094644 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7.3:+42096367 | MS.gene89330:CDS |
| AAAGGCATCCAATAGAGGCC+GGG | 0.501091 | 7.3:+42095097 | MS.gene89330:CDS |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7.3:+42093994 | MS.gene89330:CDS |
| GCAGCATGTGTCTTGACTGA+GGG | 0.510463 | 7.3:-42095059 | None:intergenic |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7.3:-42095956 | None:intergenic |
| CCTTCTTTGGTTGAAGCTAG+TGG | 0.513297 | 7.3:+42095304 | MS.gene89330:CDS |
| AACGTCTGTGCTGCGAGTTA+GGG | 0.514367 | 7.3:+42096219 | MS.gene89330:CDS |
| CTAGTGGTTATAACCCGAAA+AGG | 0.518651 | 7.3:+42095320 | MS.gene89330:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.519198 | 7.3:+42096322 | MS.gene89330:CDS |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7.3:+42095942 | MS.gene89330:CDS |
| AGGATTTAACACCCGAGGAA+AGG | 0.525211 | 7.3:+42095666 | MS.gene89330:CDS |
| AAAAGGCATCCAATAGAGGC+CGG | 0.528852 | 7.3:+42095096 | MS.gene89330:CDS |
| CAACTTTCATGGTATCCAGC+TGG | 0.530057 | 7.3:-42096337 | None:intergenic |
| CTTCATCCGCGTTCCATTCG+GGG | 0.530387 | 7.3:-42094367 | None:intergenic |
| TTGTAGGGACTTGAAATGTA+TGG | 0.531054 | 7.3:+42094521 | MS.gene89330:intron |
| AACTGTGTATCTGAAGATGC+AGG | 0.531293 | 7.3:+42096250 | MS.gene89330:CDS |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7.3:+42093944 | MS.gene89330:CDS |
| ATGTGGTCCCAAACAATCGC+GGG | 0.535746 | 7.3:+42095980 | MS.gene89330:CDS |
| TCAGTCAAGACACATGCTGC+AGG | 0.536875 | 7.3:+42095062 | MS.gene89330:CDS |
| ATCACCCTGCCCTTTCCCCA+TGG | 0.538821 | 7.3:-42094790 | None:intergenic |
| CTTCAAAATCCGATGCTCAT+CGG | 0.540300 | 7.3:+42096309 | MS.gene89330:CDS |
| ATCTTCAGATACACAGTTGG+AGG | 0.541660 | 7.3:-42096245 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7.3:+42094773 | MS.gene89330:CDS |
| AGAAGGGCCGTCGTTTCTTG+AGG | 0.547054 | 7.3:-42095287 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7.3:+42095963 | MS.gene89330:CDS |
| CAAAAGCAATCATGCTTACA+GGG | 0.548051 | 7.3:+42094091 | MS.gene89330:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7.3:+42094774 | MS.gene89330:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7.3:+42094786 | MS.gene89330:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.554434 | 7.3:+42095324 | MS.gene89330:CDS |
| AGCAGAGTCCGCAGACATCA+AGG | 0.554768 | 7.3:-42096013 | None:intergenic |
| GGAAGAAATTCATACTTGAA+AGG | 0.555899 | 7.3:+42095615 | MS.gene89330:CDS |
| ATTTCCTCCATAATTTCTTG+AGG | 0.562256 | 7.3:-42095254 | None:intergenic |
| TGCAGCATGTGTCTTGACTG+AGG | 0.563434 | 7.3:-42095060 | None:intergenic |
| TTCCATTCGGGGCAAATGAG+AGG | 0.563943 | 7.3:-42094356 | None:intergenic |
| AAGGCATCCAATAGAGGCCG+GGG | 0.566680 | 7.3:+42095098 | MS.gene89330:CDS |
| CTGGAACATCCGATGAGCAT+CGG | 0.579223 | 7.3:-42096318 | None:intergenic |
| GTCAATGAAATGGATGCTGC+AGG | 0.580740 | 7.3:+42096072 | MS.gene89330:CDS |
| TCCATTCGGGGCAAATGAGA+GGG | 0.584062 | 7.3:-42094355 | None:intergenic |
| ATATGCAAATCCATTTGAGA+AGG | 0.591672 | 7.3:+42095646 | MS.gene89330:CDS |
| TGCATCTTCAGATACACAGT+TGG | 0.592535 | 7.3:-42096248 | None:intergenic |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7.3:+42093930 | MS.gene89330:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7.3:+42096368 | MS.gene89330:CDS |
| CACTAGCTTCAACCAAAGAA+GGG | 0.597471 | 7.3:-42095303 | None:intergenic |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7.3:+42096031 | MS.gene89330:CDS |
| CAATCATGCTTACAGGGTCA+TGG | 0.600463 | 7.3:+42094097 | MS.gene89330:CDS |
| GAAGAAGTTGCTGAGCATGT+TGG | 0.602780 | 7.3:+42094557 | MS.gene89330:CDS |
| GTCAAGACACATGCTGCAGG+TGG | 0.607552 | 7.3:+42095065 | MS.gene89330:CDS |
| AAGCATCTCATACCGGAAGA+GGG | 0.618355 | 7.3:-42094643 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7.3:-42094034 | None:intergenic |
| CATACCGGAAGAGGGAAGCA+TGG | 0.621701 | 7.3:-42094635 | None:intergenic |
| GGGCAGGGTGATGACAAGAA+AGG | 0.622437 | 7.3:+42094801 | MS.gene89330:CDS |
| TCCAAATGCCTTGATGTCTG+CGG | 0.623348 | 7.3:+42096005 | MS.gene89330:CDS |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7.3:-42094027 | None:intergenic |
| TGAGAAGGATTTAACACCCG+AGG | 0.635433 | 7.3:+42095661 | MS.gene89330:CDS |
| TATGTGGTCCCAAACAATCG+CGG | 0.657727 | 7.3:+42095979 | MS.gene89330:CDS |
| TCAAAATCCTCAAGAAACGA+CGG | 0.657728 | 7.3:+42095280 | MS.gene89330:CDS |
| GACTCCTCAAGAAATTATGG+AGG | 0.662832 | 7.3:+42095250 | MS.gene89330:intron |
| GGCTTGATGAAAGAGAGCGC+AGG | 0.663647 | 7.3:+42095594 | MS.gene89330:intron |
| CATTTGCCCCGAATGGAACG+CGG | 0.668045 | 7.3:+42094361 | MS.gene89330:CDS |
| AATGTATGGCATGAATAACT+GGG | 0.679265 | 7.3:+42094535 | MS.gene89330:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7.3:+42093929 | MS.gene89330:intron |
| TGTTGGAACAAAGAACAAAG+AGG | 0.696475 | 7.3:+42094574 | MS.gene89330:CDS |
| GGATACCATGAAAGTTGACA+TGG | 0.698778 | 7.3:+42096343 | MS.gene89330:CDS |
| TGTGGTCCCAAACAATCGCG+GGG | 0.704963 | 7.3:+42095981 | MS.gene89330:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7.3:+42094775 | MS.gene89330:CDS |
| TGTGTATCTGAAGATGCAGG+AGG | 0.724507 | 7.3:+42096253 | MS.gene89330:CDS |
| ATTTAACGACTCTGACACTG+CGG | 0.774659 | 7.3:+42095399 | MS.gene89330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGATAAATCATTATATT+TGG | + | chr7.3:42094442-42094461 | MS.gene89330:intron | 10.0% |
| !! | ATTTAAATTAAATTTCATTC+AGG | - | chr7.3:42092330-42092349 | None:intergenic | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | + | chr7.3:42093876-42093895 | MS.gene89330:intron | 10.0% |
| !! | TTCATTAAAATAAATGATTT+GGG | - | chr7.3:42092788-42092807 | None:intergenic | 10.0% |
| !! | TTTCATTAAAATAAATGATT+TGG | - | chr7.3:42092789-42092808 | None:intergenic | 10.0% |
| !!! | AATATCTTTTTATTGTAATT+AGG | + | chr7.3:42093288-42093307 | MS.gene89330:intron | 10.0% |
| !!! | TTATTTTAATGAAAATCATT+TGG | + | chr7.3:42092795-42092814 | MS.gene89330:intron | 10.0% |
| !!! | TTTATGTAACTAATTTTAAT+TGG | + | chr7.3:42092555-42092574 | MS.gene89330:intron | 10.0% |
| !!! | TTTTTTTTTTTTCTTTTTTG+AGG | + | chr7.3:42092420-42092439 | MS.gene89330:intron | 10.0% |
| !! | AAAATAAAATGTAGTGTTTA+TGG | - | chr7.3:42092707-42092726 | None:intergenic | 15.0% |
| !! | ACATAGTAAATTAAAAAATG+TGG | - | chr7.3:42093491-42093510 | None:intergenic | 15.0% |
| !! | ACATCAAAAGAAAAAAAAAA+TGG | - | chr7.3:42092047-42092066 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTT+AGG | - | chr7.3:42093858-42093877 | None:intergenic | 15.0% |
| !! | ATCTATCGTTTATATATTAT+AGG | + | chr7.3:42095023-42095042 | MS.gene89330:intron | 15.0% |
| !! | TAAATAGACAATTGAATTTA+GGG | - | chr7.3:42093857-42093876 | None:intergenic | 15.0% |
| !! | TTTGAATTGAAAAATATTGA+AGG | + | chr7.3:42095573-42095592 | MS.gene89330:intron | 15.0% |
| !!! | AAAATACCTTTTTTTTTAAG+AGG | - | chr7.3:42092659-42092678 | None:intergenic | 15.0% |
| !!! | AAAGGTGTAAATTTTATATT+TGG | + | chr7.3:42095122-42095141 | MS.gene89330:intron | 15.0% |
| !!! | ATATTATTTGTTGTTGTTTT+TGG | + | chr7.3:42092089-42092108 | MS.gene89330:intron | 15.0% |
| !!! | TATTATTTGTTGTTGTTTTT+GGG | + | chr7.3:42092090-42092109 | MS.gene89330:intron | 15.0% |
| !!! | TTTTCTACCAATAATTTTTT+TGG | + | chr7.3:42094498-42094517 | MS.gene89330:intron | 15.0% |
| !! | AACAACAAATAATATAACAG+GGG | - | chr7.3:42092084-42092103 | None:intergenic | 20.0% |
| !! | AATATTGTGTAATGTCAATT+GGG | - | chr7.3:42095156-42095175 | None:intergenic | 20.0% |
| !! | ACAACAACAAATAATATAAC+AGG | - | chr7.3:42092086-42092105 | None:intergenic | 20.0% |
| !! | ACCAAAAACCAAATTAATTT+AGG | + | chr7.3:42092968-42092987 | MS.gene89330:intron | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | - | chr7.3:42092631-42092650 | None:intergenic | 20.0% |
| !! | CAACAACAAATAATATAACA+GGG | - | chr7.3:42092085-42092104 | None:intergenic | 20.0% |
| !! | CACATAAGTAAATTTACAAA+TGG | + | chr7.3:42092493-42092512 | MS.gene89330:intron | 20.0% |
| !! | TAATTTAAATGTGTAGTCAT+AGG | + | chr7.3:42092340-42092359 | MS.gene89330:intron | 20.0% |
| !! | TGATACGTATCTATAATAAA+AGG | + | chr7.3:42095446-42095465 | MS.gene89330:CDS | 20.0% |
| !!! | AATTACTCACAATTTTTCAA+AGG | + | chr7.3:42092588-42092607 | MS.gene89330:intron | 20.0% |
| !!! | ACAAGATACATTTTTCAATT+TGG | + | chr7.3:42093021-42093040 | MS.gene89330:intron | 20.0% |
| !!! | ACCTAAATTAATTTGGTTTT+TGG | - | chr7.3:42092972-42092991 | None:intergenic | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | + | chr7.3:42092563-42092582 | MS.gene89330:intron | 20.0% |
| !!! | ATACATTTTTCAATTTGGTT+AGG | + | chr7.3:42093026-42093045 | MS.gene89330:intron | 20.0% |
| !!! | ATATTATAGGATCGTATTTT+GGG | + | chr7.3:42095036-42095055 | MS.gene89330:intron | 20.0% |
| !!! | ATGTTTGAACATAATTTTCT+GGG | + | chr7.3:42093902-42093921 | MS.gene89330:intron | 20.0% |
| !!! | ATTTTTTATGAATTTGAGTG+TGG | - | chr7.3:42095515-42095534 | None:intergenic | 20.0% |
| !!! | CAATAATTTTTTTGGTTGTA+GGG | + | chr7.3:42094506-42094525 | MS.gene89330:intron | 20.0% |
| !!! | GAGTTTTATTATGTTTCAAA+AGG | - | chr7.3:42092184-42092203 | None:intergenic | 20.0% |
| !!! | GTTAATTTTATTTACTGTGT+AGG | + | chr7.3:42093350-42093369 | MS.gene89330:intron | 20.0% |
| !!! | TAAAATAAATGATTTGGGAT+TGG | - | chr7.3:42092783-42092802 | None:intergenic | 20.0% |
| !!! | TATATTATAGGATCGTATTT+TGG | + | chr7.3:42095035-42095054 | MS.gene89330:intron | 20.0% |
| !!! | TCATATTGGTCAATTTTTAT+AGG | - | chr7.3:42092617-42092636 | None:intergenic | 20.0% |
| !!! | TCTATCTCAGTTTTTTAATA+TGG | + | chr7.3:42094304-42094323 | MS.gene89330:intron | 20.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | - | chr7.3:42092544-42092563 | None:intergenic | 20.0% |
| !!! | TTTATTTTATAGTGATTCTG+TGG | - | chr7.3:42093136-42093155 | None:intergenic | 20.0% |
| ! | AAAATGTATCTTGTCTGATT+CGG | - | chr7.3:42093015-42093034 | None:intergenic | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | - | chr7.3:42092683-42092702 | None:intergenic | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | - | chr7.3:42095479-42095498 | None:intergenic | 25.0% |
| ! | AGGAAAACATTTGAAAGTAA+TGG | - | chr7.3:42094130-42094149 | None:intergenic | 25.0% |
| ! | ATAGAGCATGATAATTGAAA+AGG | - | chr7.3:42093434-42093453 | None:intergenic | 25.0% |
| ! | CAATATTGTGTAATGTCAAT+TGG | - | chr7.3:42095157-42095176 | None:intergenic | 25.0% |
| ! | CATTCTTTCAGATAGATTTA+GGG | + | chr7.3:42094942-42094961 | MS.gene89330:intron | 25.0% |
| ! | CCTACAACCAAAAAAATTAT+TGG | - | chr7.3:42094508-42094527 | None:intergenic | 25.0% |
| ! | GAAAACTTATTGTGTATGTT+TGG | + | chr7.3:42093796-42093815 | MS.gene89330:intron | 25.0% |
| ! | GAAACTAAAGAATGAAAATG+TGG | - | chr7.3:42093611-42093630 | None:intergenic | 25.0% |
| ! | TAAGTTTAACTAGACATCAA+AGG | - | chr7.3:42094150-42094169 | None:intergenic | 25.0% |
| ! | TACTGTAATATCGATATTAC+AGG | + | chr7.3:42093984-42094003 | MS.gene89330:CDS | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | + | chr7.3:42096368-42096387 | MS.gene89330:CDS | 25.0% |
| ! | TCATTCTTTCAGATAGATTT+AGG | + | chr7.3:42094941-42094960 | MS.gene89330:intron | 25.0% |
| ! | TGAACTCACCTAAATTAATT+TGG | - | chr7.3:42092979-42092998 | None:intergenic | 25.0% |
| ! | TGGATGACATTAAATTGTTA+TGG | + | chr7.3:42095816-42095835 | MS.gene89330:intron | 25.0% |
| !! | AAGAAAATGATAATGCACAT+TGG | - | chr7.3:42094998-42095017 | None:intergenic | 25.0% |
| !! | AATTGAATTTAGGGTTGTTA+GGG | - | chr7.3:42093848-42093867 | None:intergenic | 25.0% |
| !! | ACTTATGTGACTAATTTTCA+TGG | - | chr7.3:42092482-42092501 | None:intergenic | 25.0% |
| !! | ATACACAATAAGTTTTCGTT+TGG | - | chr7.3:42093793-42093812 | None:intergenic | 25.0% |
| !! | CTTATGTGACTAATTTTCAT+GGG | - | chr7.3:42092481-42092500 | None:intergenic | 25.0% |
| !! | GATGTTTGAACATAATTTTC+TGG | + | chr7.3:42093901-42093920 | MS.gene89330:intron | 25.0% |
| !! | GGTATTTTTCCATTCATTAT+TGG | + | chr7.3:42092671-42092690 | MS.gene89330:intron | 25.0% |
| !! | TGTTTGAACATAATTTTCTG+GGG | + | chr7.3:42093903-42093922 | MS.gene89330:intron | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | + | chr7.3:42096062-42096081 | MS.gene89330:CDS | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | + | chr7.3:42095471-42095490 | MS.gene89330:intron | 25.0% |
| !!! | ACCTTTTTTTTTAAGAGGAA+TGG | - | chr7.3:42092654-42092673 | None:intergenic | 25.0% |
| !!! | CCAATAATTTTTTTGGTTGT+AGG | + | chr7.3:42094505-42094524 | MS.gene89330:intron | 25.0% |
| !!! | GATATTTTTGACATTAGCAT+CGG | + | chr7.3:42092909-42092928 | MS.gene89330:intron | 25.0% |
| !!! | TAACATTTTGATCGATAGAA+AGG | + | chr7.3:42094168-42094187 | MS.gene89330:intron | 25.0% |
| !!! | TACACAATATTGATTCTTTG+AGG | + | chr7.3:42095165-42095184 | MS.gene89330:intron | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | - | chr7.3:42093578-42093597 | None:intergenic | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | - | chr7.3:42093574-42093593 | None:intergenic | 25.0% |
| AAAATGTGGCTATATGCAAT+TGG | - | chr7.3:42093597-42093616 | None:intergenic | 30.0% | |
| AAATGTATGGCATGAATAAC+TGG | + | chr7.3:42094534-42094553 | MS.gene89330:CDS | 30.0% | |
| AATGTATGGCATGAATAACT+GGG | + | chr7.3:42094535-42094554 | MS.gene89330:CDS | 30.0% | |
| ACTAGAGAGTAGATGATATT+AGG | + | chr7.3:42092242-42092261 | MS.gene89330:intron | 30.0% | |
| AGACAAATTATCCTGTCAAT+AGG | - | chr7.3:42094333-42094352 | None:intergenic | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | - | chr7.3:42093113-42093132 | None:intergenic | 30.0% | |
| ATATGCAAATCCATTTGAGA+AGG | + | chr7.3:42095646-42095665 | MS.gene89330:CDS | 30.0% | |
| ATTTCCTCCATAATTTCTTG+AGG | - | chr7.3:42095257-42095276 | None:intergenic | 30.0% | |
| CAACACATAAGTCAAAATCT+GGG | - | chr7.3:42094037-42094056 | None:intergenic | 30.0% | |
| CAATTATATCAACGACGATT+TGG | - | chr7.3:42094233-42094252 | None:intergenic | 30.0% | |
| CCATACAACTTAATGAGAAT+TGG | - | chr7.3:42092826-42092845 | None:intergenic | 30.0% | |
| CGAGTAATCATAGAAACATA+GGG | + | chr7.3:42093190-42093209 | MS.gene89330:intron | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | + | chr7.3:42095784-42095803 | MS.gene89330:CDS | 30.0% | |
| GACAAATTATCCTGTCAATA+GGG | - | chr7.3:42094332-42094351 | None:intergenic | 30.0% | |
| GCCATTCCTCTTAAAAAAAA+AGG | + | chr7.3:42092650-42092669 | MS.gene89330:intron | 30.0% | |
| GGAAGAAATTCATACTTGAA+AGG | + | chr7.3:42095615-42095634 | MS.gene89330:CDS | 30.0% | |
| GTATGATATGCTCATTAAGA+AGG | + | chr7.3:42096367-42096386 | MS.gene89330:CDS | 30.0% | |
| TAATTTAGGTGAGTTCAGTT+TGG | + | chr7.3:42092982-42093001 | MS.gene89330:intron | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | - | chr7.3:42094038-42094057 | None:intergenic | 30.0% | |
| TGAAAATAAGGAAGTTGACT+CGG | - | chr7.3:42092759-42092778 | None:intergenic | 30.0% | |
| TGATATAATTGCATTACCAC+TGG | + | chr7.3:42094242-42094261 | MS.gene89330:intron | 30.0% | |
| TGTAATGTCAATTGGGATTT+AGG | - | chr7.3:42095149-42095168 | None:intergenic | 30.0% | |
| TGTCAATGACAAAAGAACTA+TGG | - | chr7.3:42095230-42095249 | None:intergenic | 30.0% | |
| TTTATTTACTGTGTAGGTCA+AGG | + | chr7.3:42093356-42093375 | MS.gene89330:intron | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+TGG | - | chr7.3:42093249-42093268 | None:intergenic | 30.0% |
| ! | ATATCAAATTCCTGCCTTTT+CGG | - | chr7.3:42095337-42095356 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | + | chr7.3:42093328-42093347 | MS.gene89330:intron | 30.0% |
| ! | CAATTGAATTTAGGGTTGTT+AGG | - | chr7.3:42093849-42093868 | None:intergenic | 30.0% |
| ! | CCAATTCTCATTAAGTTGTA+TGG | + | chr7.3:42092823-42092842 | MS.gene89330:intron | 30.0% |
| ! | CCTATGTTTCTATGATTACT+CGG | - | chr7.3:42093192-42093211 | None:intergenic | 30.0% |
| ! | GCTAATCGTTCTTATTTACT+AGG | + | chr7.3:42094725-42094744 | MS.gene89330:intron | 30.0% |
| ! | GTGAAGTAAAAGTTAGTTTG+TGG | - | chr7.3:42092522-42092541 | None:intergenic | 30.0% |
| ! | TAAAATTTACACCTTTTCCC+CGG | - | chr7.3:42095118-42095137 | None:intergenic | 30.0% |
| ! | TCTCTGACATTTGTTAAACA+TGG | + | chr7.3:42095878-42095897 | MS.gene89330:intron | 30.0% |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | + | chr7.3:42094385-42094404 | MS.gene89330:CDS | 30.0% |
| ! | TTTGAGACCAAAATAACTGA+TGG | - | chr7.3:42092941-42092960 | None:intergenic | 30.0% |
| ! | TTTGGGATTGGATGAAAATA+AGG | - | chr7.3:42092771-42092790 | None:intergenic | 30.0% |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | + | chr7.3:42096175-42096194 | MS.gene89330:intron | 30.0% |
| AAAAAGAAGAATGCTGCAAG+TGG | + | chr7.3:42093379-42093398 | MS.gene89330:CDS | 35.0% | |
| AAATGTGTAGTCATAGGTGT+TGG | + | chr7.3:42092346-42092365 | MS.gene89330:intron | 35.0% | |
| ACAAAAGCAATCATGCTTAC+AGG | + | chr7.3:42094090-42094109 | MS.gene89330:CDS | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | + | chr7.3:42094607-42094626 | MS.gene89330:CDS | 35.0% | |
| ACAGACTCCTCAAGAAATTA+TGG | + | chr7.3:42095247-42095266 | MS.gene89330:intron | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | + | chr7.3:42095796-42095815 | MS.gene89330:intron | 35.0% | |
| AGATTCACAAGCATTTATGC+AGG | - | chr7.3:42094209-42094228 | None:intergenic | 35.0% | |
| AGTTCTGTGTTCAGAGATAA+TGG | - | chr7.3:42095762-42095781 | None:intergenic | 35.0% | |
| ATACACCATGTCAACTTTCA+TGG | - | chr7.3:42096351-42096370 | None:intergenic | 35.0% | |
| ATGATGATCCATCATGCAAA+AGG | + | chr7.3:42093238-42093257 | MS.gene89330:intron | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | + | chr7.3:42096374-42096393 | MS.gene89330:CDS | 35.0% | |
| CAAAAGCAATCATGCTTACA+GGG | + | chr7.3:42094091-42094110 | MS.gene89330:CDS | 35.0% | |
| CACTTTGACAATTTGTAGCT+TGG | + | chr7.3:42093711-42093730 | MS.gene89330:intron | 35.0% | |
| CCGAGTAATCATAGAAACAT+AGG | + | chr7.3:42093189-42093208 | MS.gene89330:intron | 35.0% | |
| GGTGTTAAATCCTTCTCAAA+TGG | - | chr7.3:42095659-42095678 | None:intergenic | 35.0% | |
| TAATATGGTTCCCTATTGAC+AGG | + | chr7.3:42094319-42094338 | MS.gene89330:intron | 35.0% | |
| TAGCTTGGAAATTATCGTCA+TGG | + | chr7.3:42093726-42093745 | MS.gene89330:intron | 35.0% | |
| TATCGTCATGGAATGAGTAT+CGG | + | chr7.3:42093738-42093757 | MS.gene89330:intron | 35.0% | |
| TCAAAATCCTCAAGAAACGA+CGG | + | chr7.3:42095280-42095299 | MS.gene89330:CDS | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | + | chr7.3:42093994-42094013 | MS.gene89330:CDS | 35.0% | |
| TCTGTGGATAAGTTTGACAA+AGG | - | chr7.3:42093120-42093139 | None:intergenic | 35.0% | |
| TGAACAATCCTTTGCTTACA+AGG | - | chr7.3:42092268-42092287 | None:intergenic | 35.0% | |
| TGGATGGAAATGAACAAGTT+TGG | - | chr7.3:42093558-42093577 | None:intergenic | 35.0% | |
| TGTTGGAACAAAGAACAAAG+AGG | + | chr7.3:42094574-42094593 | MS.gene89330:CDS | 35.0% | |
| TTGTAGGGACTTGAAATGTA+TGG | + | chr7.3:42094521-42094540 | MS.gene89330:intron | 35.0% | |
| ! | AGGCTACTTTGAATGATTGT+GGG | + | chr7.3:42092440-42092459 | MS.gene89330:intron | 35.0% |
| ! | ATATTAGGCCTTGTAAGCAA+AGG | + | chr7.3:42092257-42092276 | MS.gene89330:intron | 35.0% |
| ! | TATCAAATTCCTGCCTTTTC+GGG | - | chr7.3:42095336-42095355 | None:intergenic | 35.0% |
| ! | TCATTTGAAGCATCTCATAC+CGG | - | chr7.3:42094653-42094672 | None:intergenic | 35.0% |
| ! | TTTAAAGTCGATGCGACTAA+TGG | + | chr7.3:42094415-42094434 | MS.gene89330:intron | 35.0% |
| !! | AACAAAAAGGCATCCAATAG+AGG | + | chr7.3:42095092-42095111 | MS.gene89330:CDS | 35.0% |
| !! | AATTGCATTACCACTGGTTT+CGG | + | chr7.3:42094248-42094267 | MS.gene89330:intron | 35.0% |
| !! | GTAAGCATGATTGCTTTTGT+GGG | - | chr7.3:42094090-42094109 | None:intergenic | 35.0% |
| !! | TAAGAAAAAAGCATCGATCG+AGG | + | chr7.3:42091935-42091954 | MS.gene89330:CDS | 35.0% |
| !! | TAAGCATGATTGCTTTTGTG+GGG | - | chr7.3:42094089-42094108 | None:intergenic | 35.0% |
| !! | TGTAAGCATGATTGCTTTTG+TGG | - | chr7.3:42094091-42094110 | None:intergenic | 35.0% |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | + | chr7.3:42094392-42094411 | MS.gene89330:intron | 35.0% |
| !!! | CATTCACTTTTTTCACTGCA+TGG | + | chr7.3:42095840-42095859 | MS.gene89330:intron | 35.0% |
| !!! | TCGATCGATGCTTTTTTCTT+AGG | - | chr7.3:42091936-42091955 | None:intergenic | 35.0% |
| AACTGTGTATCTGAAGATGC+AGG | + | chr7.3:42096250-42096269 | MS.gene89330:CDS | 40.0% | |
| AAGTGAATGAATGCACGCAT+TGG | - | chr7.3:42093696-42093715 | None:intergenic | 40.0% | |
| AGAGAAGAACTTCTTGCCAT+GGG | + | chr7.3:42094774-42094793 | MS.gene89330:CDS | 40.0% | |
| AGTGGAGATAACTCAGAATC+TGG | + | chr7.3:42093397-42093416 | MS.gene89330:CDS | 40.0% | |
| AGTGTTTCTCGATCTTCGTA+AGG | + | chr7.3:42093636-42093655 | MS.gene89330:intron | 40.0% | |
| ATCGTCATGGAATGAGTATC+GGG | + | chr7.3:42093739-42093758 | MS.gene89330:intron | 40.0% | |
| ATCTTCAGATACACAGTTGG+AGG | - | chr7.3:42096248-42096267 | None:intergenic | 40.0% | |
| ATTTAACGACTCTGACACTG+CGG | + | chr7.3:42095399-42095418 | MS.gene89330:CDS | 40.0% | |
| CTAGTGGTTATAACCCGAAA+AGG | + | chr7.3:42095320-42095339 | MS.gene89330:CDS | 40.0% | |
| CTTCAAAATCCGATGCTCAT+CGG | + | chr7.3:42096309-42096328 | MS.gene89330:CDS | 40.0% | |
| GACTCCTCAAGAAATTATGG+AGG | + | chr7.3:42095250-42095269 | MS.gene89330:intron | 40.0% | |
| GGATACCATGAAAGTTGACA+TGG | + | chr7.3:42096343-42096362 | MS.gene89330:CDS | 40.0% | |
| GTTCATGCGCTTTCATACTA+AGG | + | chr7.3:42095712-42095731 | MS.gene89330:CDS | 40.0% | |
| GTTTGAGTGTGCAATACGTA+CGG | - | chr7.3:42093076-42093095 | None:intergenic | 40.0% | |
| TAAGTCAAAATCTGGGCACA+CGG | - | chr7.3:42094030-42094049 | None:intergenic | 40.0% | |
| TAGGACATGTCTCATGTTGT+TGG | + | chr7.3:42094744-42094763 | MS.gene89330:intron | 40.0% | |
| TGAGCAATTACTCGCTGATA+TGG | + | chr7.3:42095375-42095394 | MS.gene89330:CDS | 40.0% | |
| TGCAGGTGGAACTAACAAAA+AGG | + | chr7.3:42095079-42095098 | MS.gene89330:CDS | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | - | chr7.3:42096251-42096270 | None:intergenic | 40.0% | |
| TTTGAGTGTGCAATACGTAC+GGG | - | chr7.3:42093075-42093094 | None:intergenic | 40.0% | |
| ! | CACTAGCTTCAACCAAAGAA+GGG | - | chr7.3:42095306-42095325 | None:intergenic | 40.0% |
| ! | CATTTGTTAAACATGGTCGC+AGG | + | chr7.3:42095885-42095904 | MS.gene89330:intron | 40.0% |
| ! | GAGGCTACTTTGAATGATTG+TGG | + | chr7.3:42092439-42092458 | MS.gene89330:intron | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | + | chr7.3:42093924-42093943 | MS.gene89330:intron | 40.0% |
| ! | GTCAGGTCCATCAGTTATTT+TGG | + | chr7.3:42092931-42092950 | MS.gene89330:intron | 40.0% |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | + | chr7.3:42094050-42094069 | MS.gene89330:CDS | 40.0% |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | + | chr7.3:42095941-42095960 | MS.gene89330:CDS | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | + | chr7.3:42095942-42095961 | MS.gene89330:CDS | 40.0% |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | + | chr7.3:42093918-42093937 | MS.gene89330:intron | 40.0% |
| !!! | TTTTGACATTAGCATCGGTC+AGG | + | chr7.3:42092914-42092933 | MS.gene89330:intron | 40.0% |
| AAAGTCGATGCGACTAATGG+TGG | + | chr7.3:42094418-42094437 | MS.gene89330:intron | 45.0% | |
| AACAATGTTGCCGAAACCAG+TGG | - | chr7.3:42094261-42094280 | None:intergenic | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | + | chr7.3:42094781-42094800 | MS.gene89330:CDS | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | - | chr7.3:42095960-42095979 | None:intergenic | 45.0% | |
| AAGCATCTCATACCGGAAGA+GGG | - | chr7.3:42094646-42094665 | None:intergenic | 45.0% | |
| ACGACATATTGCCCTTTCCT+CGG | - | chr7.3:42095681-42095700 | None:intergenic | 45.0% | |
| AGCACTTTCTCTTGCCCTAA+GGG | - | chr7.3:42095959-42095978 | None:intergenic | 45.0% | |
| AGGATTTAACACCCGAGGAA+AGG | + | chr7.3:42095666-42095685 | MS.gene89330:CDS | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | + | chr7.3:42094594-42094613 | MS.gene89330:CDS | 45.0% | |
| CAACTTTCATGGTATCCAGC+TGG | - | chr7.3:42096340-42096359 | None:intergenic | 45.0% | |
| CAATCATGCTTACAGGGTCA+TGG | + | chr7.3:42094097-42094116 | MS.gene89330:CDS | 45.0% | |
| CAGAGAAGAACTTCTTGCCA+TGG | + | chr7.3:42094773-42094792 | MS.gene89330:CDS | 45.0% | |
| CCTTCTTTGGTTGAAGCTAG+TGG | + | chr7.3:42095304-42095323 | MS.gene89330:CDS | 45.0% | |
| CTGTCAGTGCAAATGATTGC+TGG | + | chr7.3:42096278-42096297 | MS.gene89330:CDS | 45.0% | |
| GAAGAAGTTGCTGAGCATGT+TGG | + | chr7.3:42094557-42094576 | MS.gene89330:CDS | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | + | chr7.3:42094775-42094794 | MS.gene89330:CDS | 45.0% | |
| GGATTTAACACCCGAGGAAA+GGG | + | chr7.3:42095667-42095686 | MS.gene89330:CDS | 45.0% | |
| GTCAATGAAATGGATGCTGC+AGG | + | chr7.3:42096072-42096091 | MS.gene89330:CDS | 45.0% | |
| TATGTGGTCCCAAACAATCG+CGG | + | chr7.3:42095979-42095998 | MS.gene89330:CDS | 45.0% | |
| TCCAAATGCCTTGATGTCTG+CGG | + | chr7.3:42096005-42096024 | MS.gene89330:CDS | 45.0% | |
| TGACAGAACATTACAGCCGA+CGG | - | chr7.3:42096194-42096213 | None:intergenic | 45.0% | |
| TGAGAAGGATTTAACACCCG+AGG | + | chr7.3:42095661-42095680 | MS.gene89330:CDS | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | + | chr7.3:42095324-42095343 | MS.gene89330:CDS | 45.0% | |
| TGTGTATCTGAAGATGCAGG+AGG | + | chr7.3:42096253-42096272 | MS.gene89330:CDS | 45.0% | |
| TTCTTCATCCGCGTTCCATT+CGG | - | chr7.3:42094372-42094391 | None:intergenic | 45.0% | |
| TTGTGAGTTAGGTCAAGGAG+CGG | + | chr7.3:42093929-42093948 | MS.gene89330:intron | 45.0% | |
| ! | CCACTAGCTTCAACCAAAGA+AGG | - | chr7.3:42095307-42095326 | None:intergenic | 45.0% |
| !! | AAAAGGCATCCAATAGAGGC+CGG | + | chr7.3:42095096-42095115 | MS.gene89330:CDS | 45.0% |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | + | chr7.3:42095963-42095982 | MS.gene89330:CDS | 45.0% |
| !!! | TTTAAATTTTTTTATTTTGT+TGG | + | chr7.3:42093049-42093068 | MS.gene89330:intron | 5.0% |
| !!! | TTTTACAAAATAATAAATAA+AGG | - | chr7.3:42093161-42093180 | None:intergenic | 5.0% |
| AAACGTCTGTGCTGCGAGTT+AGG | + | chr7.3:42096218-42096237 | MS.gene89330:CDS | 50.0% | |
| AACGTCTGTGCTGCGAGTTA+GGG | + | chr7.3:42096219-42096238 | MS.gene89330:CDS | 50.0% | |
| AAGAAACGACGGCCCTTCTT+TGG | + | chr7.3:42095291-42095310 | MS.gene89330:CDS | 50.0% | |
| ATGTGGTCCCAAACAATCGC+GGG | + | chr7.3:42095980-42095999 | MS.gene89330:CDS | 50.0% | |
| CGACATATTGCCCTTTCCTC+GGG | - | chr7.3:42095680-42095699 | None:intergenic | 50.0% | |
| CTGGAACATCCGATGAGCAT+CGG | - | chr7.3:42096321-42096340 | None:intergenic | 50.0% | |
| GAACTTCTTGCCATGGGGAA+AGG | + | chr7.3:42094780-42094799 | MS.gene89330:CDS | 50.0% | |
| GCAGCATGTGTCTTGACTGA+GGG | - | chr7.3:42095062-42095081 | None:intergenic | 50.0% | |
| GTCGGCTGTAATGTTCTGTC+AGG | + | chr7.3:42096193-42096212 | MS.gene89330:intron | 50.0% | |
| GTTTGGATCGAAGCGTGCTT+TGG | + | chr7.3:42093813-42093832 | MS.gene89330:intron | 50.0% | |
| TCAGTCAAGACACATGCTGC+AGG | + | chr7.3:42095062-42095081 | MS.gene89330:CDS | 50.0% | |
| TCCATTCGGGGCAAATGAGA+GGG | - | chr7.3:42094358-42094377 | None:intergenic | 50.0% | |
| TCTTCATCCGCGTTCCATTC+GGG | - | chr7.3:42094371-42094390 | None:intergenic | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | - | chr7.3:42095063-42095082 | None:intergenic | 50.0% | |
| TGTGAGTTAGGTCAAGGAGC+GGG | + | chr7.3:42093930-42093949 | MS.gene89330:intron | 50.0% | |
| TTCCATTCGGGGCAAATGAG+AGG | - | chr7.3:42094359-42094378 | None:intergenic | 50.0% | |
| TTGGAACCCCGCGATTGTTT+GGG | - | chr7.3:42095990-42096009 | None:intergenic | 50.0% | |
| ! | AACTCAGAATCTGGAGCTGC+AGG | + | chr7.3:42093406-42093425 | MS.gene89330:CDS | 50.0% |
| ! | AGGGATTTGGTTCACCCTGA+TGG | + | chr7.3:42096387-42096406 | MS.gene89330:CDS | 50.0% |
| ! | GAAGCATCTCATACCGGAAG+AGG | - | chr7.3:42094647-42094666 | None:intergenic | 50.0% |
| ! | TCCGCAGACATCAAGGCATT+TGG | - | chr7.3:42096009-42096028 | None:intergenic | 50.0% |
| ! | TTTGGAACCCCGCGATTGTT+TGG | - | chr7.3:42095991-42096010 | None:intergenic | 50.0% |
| !! | AAAGGCATCCAATAGAGGCC+GGG | + | chr7.3:42095097-42095116 | MS.gene89330:CDS | 50.0% |
| AAGGAGCGGGTGAAGCGAAA+AGG | + | chr7.3:42093943-42093962 | MS.gene89330:CDS | 55.0% | |
| AGAAGGGCCGTCGTTTCTTG+AGG | - | chr7.3:42095290-42095309 | None:intergenic | 55.0% | |
| AGCAGAGTCCGCAGACATCA+AGG | - | chr7.3:42096016-42096035 | None:intergenic | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | + | chr7.3:42093944-42093963 | MS.gene89330:CDS | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | - | chr7.3:42094638-42094657 | None:intergenic | 55.0% | |
| CATTTGCCCCGAATGGAACG+CGG | + | chr7.3:42094361-42094380 | MS.gene89330:CDS | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | + | chr7.3:42094631-42094650 | MS.gene89330:CDS | 55.0% | |
| CTTCATCCGCGTTCCATTCG+GGG | - | chr7.3:42094370-42094389 | None:intergenic | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | - | chr7.3:42094016-42094035 | None:intergenic | 55.0% | |
| GGGCAGGGTGATGACAAGAA+AGG | + | chr7.3:42094801-42094820 | MS.gene89330:CDS | 55.0% | |
| GTCAAGACACATGCTGCAGG+TGG | + | chr7.3:42095065-42095084 | MS.gene89330:CDS | 55.0% | |
| TCCAATAGAGGCCGGGGAAA+AGG | + | chr7.3:42095104-42095123 | MS.gene89330:CDS | 55.0% | |
| TCCCTCTCATTTGCCCCGAA+TGG | + | chr7.3:42094354-42094373 | MS.gene89330:CDS | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | + | chr7.3:42096322-42096341 | MS.gene89330:CDS | 55.0% | |
| TGTGGTCCCAAACAATCGCG+GGG | + | chr7.3:42095981-42096000 | MS.gene89330:CDS | 55.0% | |
| ! | AAGGCATCCAATAGAGGCCG+GGG | + | chr7.3:42095098-42095117 | MS.gene89330:CDS | 55.0% |
| ! | ACCTTTTCCCCGGCCTCTAT+TGG | - | chr7.3:42095108-42095127 | None:intergenic | 55.0% |
| ! | GGCTTGATGAAAGAGAGCGC+AGG | + | chr7.3:42095594-42095613 | MS.gene89330:intron | 55.0% |
| ATCACCCTGCCCTTTCCCCA+TGG | - | chr7.3:42094793-42094812 | None:intergenic | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | + | chr7.3:42096031-42096050 | MS.gene89330:CDS | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | - | chr7.3:42096048-42096067 | None:intergenic | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | + | chr7.3:42094786-42094805 | MS.gene89330:CDS | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | + | chr7.3:42096030-42096049 | MS.gene89330:CDS | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | + | chr7.3:42094785-42094804 | MS.gene89330:CDS | 60.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | - | chr7.3:42096043-42096062 | None:intergenic | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | - | chr7.3:42096042-42096061 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 42091921 | 42096406 | 42091921 | ID=MS.gene89330 |
| chr7.3 | mRNA | 42091921 | 42096406 | 42091921 | ID=MS.gene89330.t1;Parent=MS.gene89330 |
| chr7.3 | exon | 42091921 | 42091970 | 42091921 | ID=MS.gene89330.t1.exon1;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42091921 | 42091970 | 42091921 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42093372 | 42093427 | 42093372 | ID=MS.gene89330.t1.exon2;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42093372 | 42093427 | 42093372 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42093940 | 42094118 | 42093940 | ID=MS.gene89330.t1.exon3;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42093940 | 42094118 | 42093940 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42094341 | 42094406 | 42094341 | ID=MS.gene89330.t1.exon4;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42094341 | 42094406 | 42094341 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42094527 | 42094652 | 42094527 | ID=MS.gene89330.t1.exon5;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42094527 | 42094652 | 42094527 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42094747 | 42094822 | 42094747 | ID=MS.gene89330.t1.exon6;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42094747 | 42094822 | 42094747 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42095045 | 42095125 | 42095045 | ID=MS.gene89330.t1.exon7;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42095045 | 42095125 | 42095045 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42095251 | 42095467 | 42095251 | ID=MS.gene89330.t1.exon8;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42095251 | 42095467 | 42095251 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42095595 | 42095805 | 42095595 | ID=MS.gene89330.t1.exon9;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42095595 | 42095805 | 42095595 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42095907 | 42096116 | 42095907 | ID=MS.gene89330.t1.exon10;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42095907 | 42096116 | 42095907 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| chr7.3 | exon | 42096215 | 42096406 | 42096215 | ID=MS.gene89330.t1.exon11;Parent=MS.gene89330.t1 |
| chr7.3 | CDS | 42096215 | 42096406 | 42096215 | ID=cds.MS.gene89330.t1;Parent=MS.gene89330.t1 |
| Gene Sequence |
| Protein sequence |
