Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89411.t1 | KEH33538.1 | 96.9 | 413 | 13 | 0 | 1 | 413 | 22 | 434 | 5.70E-227 | 796.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89411.t1 | O81027 | 72.2 | 413 | 114 | 1 | 1 | 413 | 36 | 447 | 3.3e-167 | 589.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89411.t1 | G7IZR1 | 96.9 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 4.1e-227 | 796.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050638 | MS.gene89411 | 0.809612 | 1.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89411.t1 | MTR_3g041700 | 96.852 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 0.0 | 832 |
| MS.gene89411.t1 | MTR_3g041700 | 96.852 | 413 | 13 | 0 | 1 | 413 | 22 | 434 | 0.0 | 830 |
| MS.gene89411.t1 | MTR_3g041700 | 96.154 | 338 | 13 | 0 | 76 | 413 | 1 | 338 | 0.0 | 667 |
| MS.gene89411.t1 | MTR_7g089330 | 75.676 | 296 | 72 | 0 | 120 | 415 | 88 | 383 | 4.50e-164 | 467 |
| MS.gene89411.t1 | MTR_7g089330 | 76.632 | 291 | 68 | 0 | 125 | 415 | 3 | 293 | 1.82e-163 | 462 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89411.t1 | AT2G26800 | 72.155 | 413 | 114 | 1 | 1 | 413 | 1 | 412 | 0.0 | 616 |
| MS.gene89411.t1 | AT2G26800 | 72.155 | 413 | 114 | 1 | 1 | 413 | 36 | 447 | 0.0 | 615 |
| MS.gene89411.t1 | AT2G26800 | 72.155 | 413 | 114 | 1 | 1 | 413 | 36 | 447 | 0.0 | 615 |
| MS.gene89411.t1 | AT2G26800 | 71.508 | 358 | 102 | 0 | 56 | 413 | 10 | 367 | 0.0 | 531 |
| MS.gene89411.t1 | AT2G26800 | 68.038 | 316 | 100 | 1 | 1 | 316 | 36 | 350 | 2.83e-155 | 443 |
Find 100 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAGTTGCACCTTTAAATT+AGG | 0.211209 | 3.3:-32098127 | None:intergenic |
| AGTTCTGACTCCTAATTTAA+AGG | 0.233362 | 3.3:+32098117 | MS.gene89411:CDS |
| CACCGTAGTTCCAATGCTTT+TGG | 0.246522 | 3.3:+32099560 | MS.gene89411:CDS |
| AGCTAAAGCACTATATGATA+TGG | 0.269941 | 3.3:+32098938 | MS.gene89411:CDS |
| GGGAGAAACACGATGAAATT+TGG | 0.278565 | 3.3:+32097180 | MS.gene89411:CDS |
| TTTGAAGCTGCTGTTGCTGC+TGG | 0.278986 | 3.3:+32098215 | MS.gene89411:CDS |
| CATGCAAGATATGGCATATA+AGG | 0.283069 | 3.3:+32097266 | MS.gene89411:CDS |
| ATCAAAACCAACGTTGATAT+TGG | 0.285460 | 3.3:+32100302 | MS.gene89411:CDS |
| CCACTTCACCATGTCAAGTT+TGG | 0.300052 | 3.3:+32096735 | None:intergenic |
| CCGTCCACAAGTAGATAATT+TGG | 0.313604 | 3.3:+32096834 | MS.gene89411:CDS |
| AACTGGAATTGAGAGCTCTT+TGG | 0.334848 | 3.3:-32098348 | None:intergenic |
| CTCCCTGTGGTCATAGTCCT+TGG | 0.337045 | 3.3:-32097162 | None:intergenic |
| GATTCTTCAGTTGCTGGTCT+TGG | 0.351386 | 3.3:+32100203 | MS.gene89411:CDS |
| GGAGGAACCGGTCCTTCAAC+TGG | 0.357117 | 3.3:-32098897 | None:intergenic |
| GCTGTGGATTCTTCAGTTGC+TGG | 0.359338 | 3.3:+32100197 | MS.gene89411:CDS |
| ATCTCACTTGGTGACACAAT+TGG | 0.361351 | 3.3:+32098972 | MS.gene89411:CDS |
| TCTCACTTGGTGACACAATT+GGG | 0.372918 | 3.3:+32098973 | MS.gene89411:CDS |
| TATACCTGTGGGACCCATTT+GGG | 0.388962 | 3.3:-32097649 | None:intergenic |
| TAACAAAGACATGCAAGATA+TGG | 0.395825 | 3.3:+32097257 | MS.gene89411:CDS |
| CGTCCACAAGTAGATAATTT+GGG | 0.396400 | 3.3:+32096835 | MS.gene89411:CDS |
| GTCCACTTCCATGACACATA+TGG | 0.406780 | 3.3:+32099618 | MS.gene89411:CDS |
| CTGGCAATCTGATGCCTCTC+AGG | 0.410598 | 3.3:-32098096 | None:intergenic |
| ATTCATAGACTAGCATCTAC+TGG | 0.414544 | 3.3:+32097592 | MS.gene89411:CDS |
| TGGAGGGAGACAAGAATGTT+TGG | 0.416982 | 3.3:-32099651 | None:intergenic |
| ATATACCTGTGGGACCCATT+TGG | 0.423740 | 3.3:-32097650 | None:intergenic |
| CAAAATGCATACCCTCGAAC+TGG | 0.425699 | 3.3:-32098365 | None:intergenic |
| AATTCAATCTTTACATCTGT+TGG | 0.426921 | 3.3:-32097568 | None:intergenic |
| TGTACCTCAGATTACCAGTA+TGG | 0.432763 | 3.3:+32097222 | MS.gene89411:CDS |
| TCTTCAGTTGCTGGTCTTGG+TGG | 0.441483 | 3.3:+32100206 | MS.gene89411:CDS |
| ACAAGTAGATAATTTGGGTA+TGG | 0.441687 | 3.3:+32096840 | MS.gene89411:CDS |
| GGTGGCTGTCCATATGCTAA+GGG | 0.446426 | 3.3:+32100224 | MS.gene89411:CDS |
| TGGTGGCTGTCCATATGCTA+AGG | 0.451026 | 3.3:+32100223 | MS.gene89411:CDS |
| TCCACTCACGTTGATGAGTT+AGG | 0.454117 | 3.3:+32100568 | MS.gene89411:CDS |
| ATGGGAAACTGCTTTATTGA+AGG | 0.479991 | 3.3:+32096859 | MS.gene89411:CDS |
| GCCATTACAGCCAAAAGCAT+TGG | 0.482879 | 3.3:-32099570 | None:intergenic |
| TTTGTTAAGATAGTTGAAGT+TGG | 0.487269 | 3.3:+32097508 | MS.gene89411:CDS |
| TTTAAATTAGGAGTCAGAAC+TGG | 0.489900 | 3.3:-32098115 | None:intergenic |
| TCCACTTCCATGACACATAT+GGG | 0.494495 | 3.3:+32099619 | MS.gene89411:CDS |
| GCTAAAGCACTATATGATAT+GGG | 0.494567 | 3.3:+32098939 | MS.gene89411:CDS |
| GAGCTCTCAATTCCAGTTCG+AGG | 0.500214 | 3.3:+32098353 | MS.gene89411:CDS |
| TCATGCTTGGCAGCTTGTCA+TGG | 0.500596 | 3.3:-32096771 | None:intergenic |
| CAAGTAGATAATTTGGGTAT+GGG | 0.504928 | 3.3:+32096841 | MS.gene89411:CDS |
| AGAGTTCAGAGGTTCTCATC+TGG | 0.505085 | 3.3:+32096805 | MS.gene89411:CDS |
| CAGAAACATACCCTTGGAAA+AGG | 0.505637 | 3.3:+32097103 | MS.gene89411:CDS |
| CTGTCCATGGTACTCATGCT+TGG | 0.511059 | 3.3:-32096784 | None:intergenic |
| ACAATTGGGGTAGGCACACC+AGG | 0.520924 | 3.3:+32098987 | MS.gene89411:CDS |
| GTCTCCCAAATGGGTCCCAC+AGG | 0.524840 | 3.3:+32097645 | MS.gene89411:CDS |
| TCAACTATCTTAACAAACTC+AGG | 0.528412 | 3.3:-32097502 | None:intergenic |
| CTTCACCATGTCAAGTTTGG+AGG | 0.529375 | 3.3:+32096738 | None:intergenic |
| AGCCAAAAGCATTGGAACTA+CGG | 0.530502 | 3.3:-32099562 | None:intergenic |
| GGCAGCTTGTCATGGCCAAG+TGG | 0.534171 | 3.3:-32096763 | None:intergenic |
| GCCCATATGTGTCATGGAAG+TGG | 0.539936 | 3.3:-32099620 | None:intergenic |
| TGGATGCCCAGTTGAAGGAC+CGG | 0.541275 | 3.3:+32098890 | MS.gene89411:CDS |
| ATTGGAAAGCTCATGCAAGC+TGG | 0.545049 | 3.3:+32100320 | MS.gene89411:CDS |
| ATGCAAGCTGGCGACTTCAT+CGG | 0.545221 | 3.3:+32100332 | MS.gene89411:CDS |
| GGGAGACAAGAATGTTTGGA+AGG | 0.547452 | 3.3:-32099647 | None:intergenic |
| GATGTTGTGTACATGCTGAA+TGG | 0.548740 | 3.3:+32100272 | MS.gene89411:CDS |
| ACGAGTGACAGCTCGATAGC+GGG | 0.549034 | 3.3:-32098321 | None:intergenic |
| GTTGTTGGATGCCCAGTTGA+AGG | 0.549854 | 3.3:+32098885 | MS.gene89411:CDS |
| GTTGAAGTTGGACCAAGGGA+TGG | 0.550966 | 3.3:+32097520 | MS.gene89411:CDS |
| TATTTGTTAACTTACTTGGA+GGG | 0.551242 | 3.3:-32099667 | None:intergenic |
| ATACCCAAATTATCTACTTG+TGG | 0.551302 | 3.3:-32096838 | None:intergenic |
| GTGTACATGCTGAATGGACT+TGG | 0.556574 | 3.3:+32100278 | MS.gene89411:CDS |
| TTCATAGACTAGCATCTACT+GGG | 0.564553 | 3.3:+32097593 | MS.gene89411:CDS |
| TACTGGGTTATCTGTCATTG+AGG | 0.564876 | 3.3:+32097609 | MS.gene89411:CDS |
| TCAAGTTTGGAGGAGCCACT+TGG | 0.565206 | 3.3:+32096748 | MS.gene89411:CDS |
| GGGATTGCCCATATGTGTCA+TGG | 0.578354 | 3.3:-32099626 | None:intergenic |
| GGTTGTTTCGAAATCTCACT+TGG | 0.579694 | 3.3:+32098960 | MS.gene89411:CDS |
| GAGCTTTCCAATATCAACGT+TGG | 0.580121 | 3.3:-32100309 | None:intergenic |
| GATAGTTGAAGTTGGACCAA+GGG | 0.581744 | 3.3:+32097516 | MS.gene89411:CDS |
| TGGACTGAAAGAGTCACCTC+GGG | 0.587158 | 3.3:-32097142 | None:intergenic |
| TCCTAACTCATCAACGTGAG+TGG | 0.593347 | 3.3:-32100569 | None:intergenic |
| AGCTCTCAATTCCAGTTCGA+GGG | 0.594177 | 3.3:+32098354 | MS.gene89411:CDS |
| TGGGCAATGCAGTTTATGAA+AGG | 0.595135 | 3.3:+32097475 | MS.gene89411:intron |
| GGAGACAAGAATGTTTGGAA+GGG | 0.595834 | 3.3:-32099646 | None:intergenic |
| GTGGCTGTCCATATGCTAAG+GGG | 0.598484 | 3.3:+32100225 | MS.gene89411:CDS |
| ACACAGCAGAAACATACCCT+TGG | 0.600138 | 3.3:+32097097 | MS.gene89411:CDS |
| CCAAATTATCTACTTGTGGA+CGG | 0.600561 | 3.3:-32096834 | None:intergenic |
| CACGAGTGACAGCTCGATAG+CGG | 0.601591 | 3.3:-32098322 | None:intergenic |
| TTTCATCGTGTTTCTCCCTG+TGG | 0.602715 | 3.3:-32097175 | None:intergenic |
| TGGCTCCTCCAAACTTGACA+TGG | 0.606063 | 3.3:-32096743 | None:intergenic |
| TGGCTGTCCATATGCTAAGG+GGG | 0.610224 | 3.3:+32100226 | MS.gene89411:CDS |
| GAGGAACCGGTCCTTCAACT+GGG | 0.613982 | 3.3:-32098896 | None:intergenic |
| AGTCCAAGGACTATGACCAC+AGG | 0.615138 | 3.3:+32097159 | MS.gene89411:CDS |
| AGGTATGTATCATGCGTTGT+TGG | 0.615911 | 3.3:+32098870 | MS.gene89411:intron |
| CTTGGTGACACAATTGGGGT+AGG | 0.625438 | 3.3:+32098978 | MS.gene89411:CDS |
| GAGGTGACTCTTTCAGTCCA+AGG | 0.626999 | 3.3:+32097145 | MS.gene89411:CDS |
| GGCATCAGGAAATGTAGCGA+CGG | 0.627133 | 3.3:+32100247 | MS.gene89411:CDS |
| ATAGATGGGAATAAGTGCTG+TGG | 0.633320 | 3.3:+32100181 | MS.gene89411:intron |
| AGATAGTTGAAGTTGGACCA+AGG | 0.636448 | 3.3:+32097515 | MS.gene89411:CDS |
| GAACCTCTGAACTCTGTCCA+TGG | 0.637112 | 3.3:-32096797 | None:intergenic |
| TTGGACTGAAAGAGTCACCT+CGG | 0.641749 | 3.3:-32097143 | None:intergenic |
| CTCACTTGGTGACACAATTG+GGG | 0.642342 | 3.3:+32098974 | MS.gene89411:CDS |
| TTGACCATACTGGTAATCTG+AGG | 0.644486 | 3.3:-32097226 | None:intergenic |
| GCTGCCAAGCATGAGTACCA+TGG | 0.664679 | 3.3:+32096780 | MS.gene89411:CDS |
| GTCCAAGGACTATGACCACA+GGG | 0.671076 | 3.3:+32097160 | MS.gene89411:CDS |
| TGGTAATCTGAGGTACAAAG+TGG | 0.671809 | 3.3:-32097216 | None:intergenic |
| CAAGCAGTTCATAACCTGAG+AGG | 0.688642 | 3.3:+32098082 | MS.gene89411:CDS |
| GTACCATGGACAGAGTTCAG+AGG | 0.731970 | 3.3:+32096794 | MS.gene89411:CDS |
| CAAACAAGAGACATGTCCCG+AGG | 0.735346 | 3.3:+32097126 | MS.gene89411:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTATTAAATTATAATTCTT+TGG | + | chr3.3:32097334-32097353 | MS.gene89411:intron | 10.0% |
| !!! | AAAATGATTTTTTATCATTA+TGG | - | chr3.3:32097781-32097800 | None:intergenic | 10.0% |
| !!! | AAATGATTTTTTATCATTAT+GGG | - | chr3.3:32097780-32097799 | None:intergenic | 10.0% |
| !!! | ATCTATATTTTACATTTATA+GGG | + | chr3.3:32098191-32098210 | MS.gene89411:intron | 10.0% |
| !!! | TTTCATTTATTTTTGTTTAT+TGG | + | chr3.3:32099699-32099718 | MS.gene89411:intron | 10.0% |
| !!! | TTTTTCATATATTTTTTAAC+TGG | - | chr3.3:32099116-32099135 | None:intergenic | 10.0% |
| !! | AAGTTAAATAAATATGACAA+AGG | - | chr3.3:32097685-32097704 | None:intergenic | 15.0% |
| !! | CAAAAATAAATGAAAAATTC+AGG | - | chr3.3:32099694-32099713 | None:intergenic | 15.0% |
| !! | GAAAATTAAAAGAAAAACTT+GGG | + | chr3.3:32099239-32099258 | MS.gene89411:intron | 15.0% |
| !! | TGAAAATTAAAAGAAAAACT+TGG | + | chr3.3:32099238-32099257 | MS.gene89411:intron | 15.0% |
| !!! | AGATACTTAAATTTTTTAAC+TGG | + | chr3.3:32097455-32097474 | MS.gene89411:intron | 15.0% |
| !!! | CATCTATATTTTACATTTAT+AGG | + | chr3.3:32098190-32098209 | MS.gene89411:intron | 15.0% |
| !!! | GATACTTAAATTTTTTAACT+GGG | + | chr3.3:32097456-32097475 | MS.gene89411:intron | 15.0% |
| !!! | TCATATATTTTTTAGAATGT+AGG | + | chr3.3:32100062-32100081 | MS.gene89411:intron | 15.0% |
| !!! | TCTATATTTTACATTTATAG+GGG | + | chr3.3:32098192-32098211 | MS.gene89411:intron | 15.0% |
| !!! | TGTTGATATTGTAAATTTTA+TGG | + | chr3.3:32098789-32098808 | MS.gene89411:intron | 15.0% |
| !!! | TTATTATTTTAATTGTGATC+AGG | + | chr3.3:32099537-32099556 | MS.gene89411:intron | 15.0% |
| !! | AATTGAAAACAGAAATCAAA+GGG | + | chr3.3:32099361-32099380 | MS.gene89411:intron | 20.0% |
| !! | AATTTACAATATCAACACAA+AGG | - | chr3.3:32098786-32098805 | None:intergenic | 20.0% |
| !! | ATATAGATGTTATCATATCT+TGG | - | chr3.3:32100426-32100445 | None:intergenic | 20.0% |
| !! | ATATATAATTGGCAGATAAT+AGG | - | chr3.3:32097028-32097047 | None:intergenic | 20.0% |
| !! | ATCCTATAGAAAATATCAAA+TGG | - | chr3.3:32098496-32098515 | None:intergenic | 20.0% |
| !! | ATTTACAATATCAACACAAA+GGG | - | chr3.3:32098785-32098804 | None:intergenic | 20.0% |
| !! | CAATTACTTGTATAGAAAAA+TGG | - | chr3.3:32099346-32099365 | None:intergenic | 20.0% |
| !! | GAATTATAATATATACCTGT+GGG | - | chr3.3:32097663-32097682 | None:intergenic | 20.0% |
| !! | GATTGAGTTTAAAAAATATG+TGG | - | chr3.3:32098720-32098739 | None:intergenic | 20.0% |
| !! | GGTTATGCTATATATATAAT+TGG | - | chr3.3:32097039-32097058 | None:intergenic | 20.0% |
| !! | TAAGTATTTCATAGAATTTG+AGG | - | chr3.3:32098636-32098655 | None:intergenic | 20.0% |
| !! | TAATTGAAAACAGAAATCAA+AGG | + | chr3.3:32099360-32099379 | MS.gene89411:intron | 20.0% |
| !! | TAGCATAAAAATATATATCC+AGG | + | chr3.3:32100462-32100481 | MS.gene89411:intron | 20.0% |
| !! | TATCAAACAACTATGATTAA+TGG | + | chr3.3:32099796-32099815 | MS.gene89411:intron | 20.0% |
| !! | TCCTATAGAAAATATCAAAT+GGG | - | chr3.3:32098495-32098514 | None:intergenic | 20.0% |
| !! | TTAAGTCTGAAAATATGAAA+TGG | - | chr3.3:32099303-32099322 | None:intergenic | 20.0% |
| !! | TTGTATGCATATAAATAGAT+GGG | + | chr3.3:32100167-32100186 | MS.gene89411:intron | 20.0% |
| !! | TTTGTATGCATATAAATAGA+TGG | + | chr3.3:32100166-32100185 | MS.gene89411:intron | 20.0% |
| !!! | CATATTTTTTAAACTCAATC+AGG | + | chr3.3:32098720-32098739 | MS.gene89411:intron | 20.0% |
| !!! | TCTAGTTGTATCTTTTATAA+TGG | - | chr3.3:32097956-32097975 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAATTTTCACTGT+TGG | - | chr3.3:32099234-32099253 | None:intergenic | 20.0% |
| !!! | TTTTAGATTAAAATCGTACT+TGG | + | chr3.3:32099040-32099059 | MS.gene89411:intron | 20.0% |
| ! | AAATCTAAATCCAAGGTATA+CGG | - | chr3.3:32099845-32099864 | None:intergenic | 25.0% |
| ! | AAGTTCATCTAACATTGAAT+TGG | + | chr3.3:32098576-32098595 | MS.gene89411:intron | 25.0% |
| ! | AAGTTTAAATTCATTGCAGT+TGG | + | chr3.3:32097396-32097415 | MS.gene89411:intron | 25.0% |
| ! | AATTCAATCTTTACATCTGT+TGG | - | chr3.3:32097571-32097590 | None:intergenic | 25.0% |
| ! | ACACATTACATATATAGAAG+AGG | - | chr3.3:32099749-32099768 | None:intergenic | 25.0% |
| ! | ACTTGCAAGTTATATTAAAG+TGG | - | chr3.3:32098425-32098444 | None:intergenic | 25.0% |
| ! | ATCAGTGCTGTATTTAAATT+TGG | + | chr3.3:32098846-32098865 | MS.gene89411:intron | 25.0% |
| ! | ATTAAAGTGGTGATATTTGA+TGG | - | chr3.3:32098412-32098431 | None:intergenic | 25.0% |
| ! | CCTATAGAAAATATCAAATG+GGG | - | chr3.3:32098494-32098513 | None:intergenic | 25.0% |
| ! | GATATTATGAATGATTGTTG+TGG | + | chr3.3:32097711-32097730 | MS.gene89411:intron | 25.0% |
| ! | GGAATTATAATATATACCTG+TGG | - | chr3.3:32097664-32097683 | None:intergenic | 25.0% |
| ! | TCAAACATTTAATTGAGACT+AGG | + | chr3.3:32099434-32099453 | MS.gene89411:intron | 25.0% |
| ! | TTAAAGTGGTGATATTTGAT+GGG | - | chr3.3:32098411-32098430 | None:intergenic | 25.0% |
| ! | TTTGTTAAGATAGTTGAAGT+TGG | + | chr3.3:32097508-32097527 | MS.gene89411:CDS | 25.0% |
| !! | GTGATTTTGTCATATTTCTT+TGG | + | chr3.3:32097418-32097437 | MS.gene89411:intron | 25.0% |
| !! | TATTTGTTAACTTACTTGGA+GGG | - | chr3.3:32099670-32099689 | None:intergenic | 25.0% |
| !! | TTGATAGTTCGTTCATTAAT+TGG | - | chr3.3:32099782-32099801 | None:intergenic | 25.0% |
| !! | TTTTGTTCTTCTTCTATAAC+TGG | - | chr3.3:32100546-32100565 | None:intergenic | 25.0% |
| !!! | AATTTAAATACAGCACTGAT+TGG | - | chr3.3:32098846-32098865 | None:intergenic | 25.0% |
| !!! | ATTGTTGTTTTGAGATGATT+TGG | + | chr3.3:32098682-32098701 | MS.gene89411:intron | 25.0% |
| AAATCAAATGACATTGAAGC+AGG | - | chr3.3:32098029-32098048 | None:intergenic | 30.0% | |
| AATATAGATGAGACATCTGA+AGG | - | chr3.3:32098180-32098199 | None:intergenic | 30.0% | |
| AATTGAGACTAGGAAGAATT+GGG | + | chr3.3:32099444-32099463 | MS.gene89411:intron | 30.0% | |
| ACAAGTAGATAATTTGGGTA+TGG | + | chr3.3:32096840-32096859 | MS.gene89411:CDS | 30.0% | |
| ACAGTGGAAATAATTGGTTA+AGG | - | chr3.3:32097993-32098012 | None:intergenic | 30.0% | |
| ATACCCAAATTATCTACTTG+TGG | - | chr3.3:32096841-32096860 | None:intergenic | 30.0% | |
| ATATAGATGAGACATCTGAA+GGG | - | chr3.3:32098179-32098198 | None:intergenic | 30.0% | |
| ATCAAAACCAACGTTGATAT+TGG | + | chr3.3:32100302-32100321 | MS.gene89411:CDS | 30.0% | |
| CAAGTAGATAATTTGGGTAT+GGG | + | chr3.3:32096841-32096860 | MS.gene89411:CDS | 30.0% | |
| CACATTACAGTGGAAATAAT+TGG | - | chr3.3:32097999-32098018 | None:intergenic | 30.0% | |
| CAGAAATCAAAGGGAAAATA+AGG | + | chr3.3:32099370-32099389 | MS.gene89411:intron | 30.0% | |
| CATATAGAATGATATCCCAT+TGG | - | chr3.3:32100496-32100515 | None:intergenic | 30.0% | |
| GATAGTTGCACCTTTAAATT+AGG | - | chr3.3:32098130-32098149 | None:intergenic | 30.0% | |
| GTATACCATAGTGTAATTGT+GGG | - | chr3.3:32099185-32099204 | None:intergenic | 30.0% | |
| GTCATATTTCTTTGGTTAGT+TGG | + | chr3.3:32097426-32097445 | MS.gene89411:intron | 30.0% | |
| GTGCTGTATTTAAATTTGGT+AGG | + | chr3.3:32098850-32098869 | MS.gene89411:intron | 30.0% | |
| GTTGAGCACAAATAAAAAGT+GGG | - | chr3.3:32097849-32097868 | None:intergenic | 30.0% | |
| TAACAAAGACATGCAAGATA+TGG | + | chr3.3:32097257-32097276 | MS.gene89411:CDS | 30.0% | |
| TAATTGAGACTAGGAAGAAT+TGG | + | chr3.3:32099443-32099462 | MS.gene89411:intron | 30.0% | |
| TCAACTATCTTAACAAACTC+AGG | - | chr3.3:32097505-32097524 | None:intergenic | 30.0% | |
| TCATCTCAAAACAACAATAC+AGG | - | chr3.3:32098680-32098699 | None:intergenic | 30.0% | |
| TGATTCGTTTGATCTTAATC+AGG | - | chr3.3:32099918-32099937 | None:intergenic | 30.0% | |
| TGTTGAGCACAAATAAAAAG+TGG | - | chr3.3:32097850-32097869 | None:intergenic | 30.0% | |
| TTGAGCACAAATAAAAAGTG+GGG | - | chr3.3:32097848-32097867 | None:intergenic | 30.0% | |
| TTTAAATTAGGAGTCAGAAC+TGG | - | chr3.3:32098118-32098137 | None:intergenic | 30.0% | |
| ! | AGCTAAAGCACTATATGATA+TGG | + | chr3.3:32098938-32098957 | MS.gene89411:CDS | 30.0% |
| ! | AGGCTATTTGTTAACTTACT+TGG | - | chr3.3:32099674-32099693 | None:intergenic | 30.0% |
| ! | AGTTCTGACTCCTAATTTAA+AGG | + | chr3.3:32098117-32098136 | MS.gene89411:CDS | 30.0% |
| ! | CAGTTATTAATGGACATTCT+TGG | + | chr3.3:32100143-32100162 | MS.gene89411:intron | 30.0% |
| ! | CATAGAATTTGAGGTCTTAT+GGG | - | chr3.3:32098627-32098646 | None:intergenic | 30.0% |
| ! | CCCCATTTGATATTTTCTAT+AGG | + | chr3.3:32098491-32098510 | MS.gene89411:intron | 30.0% |
| ! | CTATTTGTTAACTTACTTGG+AGG | - | chr3.3:32099671-32099690 | None:intergenic | 30.0% |
| ! | GCTAAAGCACTATATGATAT+GGG | + | chr3.3:32098939-32098958 | MS.gene89411:CDS | 30.0% |
| ! | TCAGAAAGAGCATGTATATT+CGG | - | chr3.3:32099513-32099532 | None:intergenic | 30.0% |
| ! | TCATAGAATTTGAGGTCTTA+TGG | - | chr3.3:32098628-32098647 | None:intergenic | 30.0% |
| ! | TTGGTAGTCTCAGTTATTAA+TGG | + | chr3.3:32100133-32100152 | MS.gene89411:intron | 30.0% |
| !! | CATTTGATTTGTCTTTCAGT+TGG | + | chr3.3:32098039-32098058 | MS.gene89411:intron | 30.0% |
| AAGTCATCTAACTCATTACC+TGG | - | chr3.3:32099008-32099027 | None:intergenic | 35.0% | |
| AGGTAAATCTCACATTACAG+TGG | - | chr3.3:32098009-32098028 | None:intergenic | 35.0% | |
| ATAGGTCAGTAATACATGAC+AGG | - | chr3.3:32097010-32097029 | None:intergenic | 35.0% | |
| ATGAGTCATCCTATCTTGAT+TGG | + | chr3.3:32099980-32099999 | MS.gene89411:intron | 35.0% | |
| ATGGCATATAAGGTATGCAA+TGG | + | chr3.3:32097276-32097295 | MS.gene89411:intron | 35.0% | |
| ATGTAGGTATCTGTATAACC+AGG | + | chr3.3:32100078-32100097 | MS.gene89411:intron | 35.0% | |
| ATTCATAGACTAGCATCTAC+TGG | + | chr3.3:32097592-32097611 | MS.gene89411:CDS | 35.0% | |
| ATTGAGACTAGGAAGAATTG+GGG | + | chr3.3:32099445-32099464 | MS.gene89411:intron | 35.0% | |
| CAAATATAGAGAAGGATGCA+GGG | - | chr3.3:32098531-32098550 | None:intergenic | 35.0% | |
| CAGGGGTTAATGTAAAGTAA+AGG | - | chr3.3:32096991-32097010 | None:intergenic | 35.0% | |
| CATGCAAGATATGGCATATA+AGG | + | chr3.3:32097266-32097285 | MS.gene89411:CDS | 35.0% | |
| CATGTATATTCGGGATTAAG+AGG | - | chr3.3:32099503-32099522 | None:intergenic | 35.0% | |
| CCAAATTATCTACTTGTGGA+CGG | - | chr3.3:32096837-32096856 | None:intergenic | 35.0% | |
| CGTCCACAAGTAGATAATTT+GGG | + | chr3.3:32096835-32096854 | MS.gene89411:CDS | 35.0% | |
| CTGCAGAAAATCTAAATCCA+AGG | - | chr3.3:32099852-32099871 | None:intergenic | 35.0% | |
| GGTATACCATAGTGTAATTG+TGG | - | chr3.3:32099186-32099205 | None:intergenic | 35.0% | |
| TAGGTCAGTAATACATGACA+GGG | - | chr3.3:32097009-32097028 | None:intergenic | 35.0% | |
| TCAATGAATACCGTATACCT+TGG | + | chr3.3:32099832-32099851 | MS.gene89411:intron | 35.0% | |
| TGAGCACAAATAAAAAGTGG+GGG | - | chr3.3:32097847-32097866 | None:intergenic | 35.0% | |
| TGGGATAGCATTAGGAATAA+TGG | - | chr3.3:32098608-32098627 | None:intergenic | 35.0% | |
| TGTAACTGTTAAGACCTTGA+CGG | - | chr3.3:32098751-32098770 | None:intergenic | 35.0% | |
| TTCATAGACTAGCATCTACT+GGG | + | chr3.3:32097593-32097612 | MS.gene89411:CDS | 35.0% | |
| ! | AACCAGGTTTAACTTTAAGC+TGG | + | chr3.3:32100094-32100113 | MS.gene89411:intron | 35.0% |
| ! | ACCAGGTTTAACTTTAAGCT+GGG | + | chr3.3:32100095-32100114 | MS.gene89411:intron | 35.0% |
| ! | ATAACTTGCAAGTTGCAAGT+GGG | + | chr3.3:32098432-32098451 | MS.gene89411:intron | 35.0% |
| ! | ATGGGAAACTGCTTTATTGA+AGG | + | chr3.3:32096859-32096878 | MS.gene89411:CDS | 35.0% |
| ! | CAGAAAGAGCATGTATATTC+GGG | - | chr3.3:32099512-32099531 | None:intergenic | 35.0% |
| ! | GGATTTAGATTTTCTGCAGT+TGG | + | chr3.3:32099853-32099872 | MS.gene89411:intron | 35.0% |
| ! | GTTCGGATTGAATGATTTTG+AGG | - | chr3.3:32097887-32097906 | None:intergenic | 35.0% |
| ! | TATAACTTGCAAGTTGCAAG+TGG | + | chr3.3:32098431-32098450 | MS.gene89411:intron | 35.0% |
| ! | TCATTTTGTAATCCATCCCT+TGG | - | chr3.3:32097535-32097554 | None:intergenic | 35.0% |
| ! | TGGGTCTGCATTTTATGATT+TGG | + | chr3.3:32100114-32100133 | MS.gene89411:intron | 35.0% |
| ! | TTGATGGGTGCTTAGAATAA+TGG | - | chr3.3:32098396-32098415 | None:intergenic | 35.0% |
| !!! | ACATAAGCTACTTTTGATGG+AGG | - | chr3.3:32098918-32098937 | None:intergenic | 35.0% |
| !!! | CTTAGGATTTTCTAGCTGTA+AGG | + | chr3.3:32100031-32100050 | MS.gene89411:intron | 35.0% |
| !!! | GCTACATAAGCTACTTTTGA+TGG | - | chr3.3:32098921-32098940 | None:intergenic | 35.0% |
| !!! | TAGTTTTGTGTCTCCCAAAT+GGG | + | chr3.3:32097636-32097655 | MS.gene89411:CDS | 35.0% |
| !!! | TTTTCTAGCTGTAAGGAATC+TGG | + | chr3.3:32100038-32100057 | MS.gene89411:intron | 35.0% |
| AACTGGAATTGAGAGCTCTT+TGG | - | chr3.3:32098351-32098370 | None:intergenic | 40.0% | |
| AACTGTGCACTAAATGCGTA+AGG | - | chr3.3:32097913-32097932 | None:intergenic | 40.0% | |
| ACCCAGCTTAAAGTTAAACC+TGG | - | chr3.3:32100099-32100118 | None:intergenic | 40.0% | |
| ACTCGGTAAATCACATTCGA+AGG | - | chr3.3:32099955-32099974 | None:intergenic | 40.0% | |
| AGATAGTTGAAGTTGGACCA+AGG | + | chr3.3:32097515-32097534 | MS.gene89411:CDS | 40.0% | |
| AGGATGACTCATGTTCAACT+CGG | - | chr3.3:32099972-32099991 | None:intergenic | 40.0% | |
| AGGCACATCTTGTGCTTAAT+TGG | - | chr3.3:32099145-32099164 | None:intergenic | 40.0% | |
| AGGTATGTATCATGCGTTGT+TGG | + | chr3.3:32098870-32098889 | MS.gene89411:intron | 40.0% | |
| AGGTCAGTAATACATGACAG+GGG | - | chr3.3:32097008-32097027 | None:intergenic | 40.0% | |
| ATCCAGGTGATTCAACCAAT+GGG | + | chr3.3:32100478-32100497 | MS.gene89411:intron | 40.0% | |
| CAAGACCCACAATTACACTA+TGG | + | chr3.3:32099177-32099196 | MS.gene89411:intron | 40.0% | |
| CAGAAACATACCCTTGGAAA+AGG | + | chr3.3:32097103-32097122 | MS.gene89411:CDS | 40.0% | |
| CATAGTGTAATTGTGGGTCT+TGG | - | chr3.3:32099179-32099198 | None:intergenic | 40.0% | |
| CATCTTGTGCTTAATTGGGT+TGG | - | chr3.3:32099140-32099159 | None:intergenic | 40.0% | |
| CCAAATATAGAGAAGGATGC+AGG | - | chr3.3:32098532-32098551 | None:intergenic | 40.0% | |
| CCGTCCACAAGTAGATAATT+TGG | + | chr3.3:32096834-32096853 | MS.gene89411:CDS | 40.0% | |
| CCTGCATCCTTCTCTATATT+TGG | + | chr3.3:32098529-32098548 | MS.gene89411:intron | 40.0% | |
| CTAAATGCGTAAGGTCTGTT+CGG | - | chr3.3:32097904-32097923 | None:intergenic | 40.0% | |
| GAGCTTTCCAATATCAACGT+TGG | - | chr3.3:32100312-32100331 | None:intergenic | 40.0% | |
| GATAGTTGAAGTTGGACCAA+GGG | + | chr3.3:32097516-32097535 | MS.gene89411:CDS | 40.0% | |
| GATGTTGTGTACATGCTGAA+TGG | + | chr3.3:32100272-32100291 | MS.gene89411:CDS | 40.0% | |
| GCATCCTTCTCTATATTTGG+TGG | + | chr3.3:32098532-32098551 | MS.gene89411:intron | 40.0% | |
| GGAGACAAGAATGTTTGGAA+GGG | - | chr3.3:32099649-32099668 | None:intergenic | 40.0% | |
| GGCACATCTTGTGCTTAATT+GGG | - | chr3.3:32099144-32099163 | None:intergenic | 40.0% | |
| GGGAGAAACACGATGAAATT+TGG | + | chr3.3:32097180-32097199 | MS.gene89411:CDS | 40.0% | |
| GTATACCCTATACAGAGAGA+CGG | + | chr3.3:32099199-32099218 | MS.gene89411:intron | 40.0% | |
| TACATGACTGTGGCAAACTT+AGG | + | chr3.3:32100014-32100033 | MS.gene89411:intron | 40.0% | |
| TACTGGGTTATCTGTCATTG+AGG | + | chr3.3:32097609-32097628 | MS.gene89411:CDS | 40.0% | |
| TATCCAGGTGATTCAACCAA+TGG | + | chr3.3:32100477-32100496 | MS.gene89411:intron | 40.0% | |
| TCCACTTCCATGACACATAT+GGG | + | chr3.3:32099619-32099638 | MS.gene89411:CDS | 40.0% | |
| TCTTCATTGTCTTCACTGCA+CGG | - | chr3.3:32097075-32097094 | None:intergenic | 40.0% | |
| TGAGCCACCAAATATAGAGA+AGG | - | chr3.3:32098539-32098558 | None:intergenic | 40.0% | |
| TGGGCAATGCAGTTTATGAA+AGG | + | chr3.3:32097475-32097494 | MS.gene89411:intron | 40.0% | |
| TGTACCTCAGATTACCAGTA+TGG | + | chr3.3:32097222-32097241 | MS.gene89411:CDS | 40.0% | |
| TTGACCATACTGGTAATCTG+AGG | - | chr3.3:32097229-32097248 | None:intergenic | 40.0% | |
| ! | AGGTCTTATGGGATAGCATT+AGG | - | chr3.3:32098616-32098635 | None:intergenic | 40.0% |
| ! | ATAGATGGGAATAAGTGCTG+TGG | + | chr3.3:32100181-32100200 | MS.gene89411:intron | 40.0% |
| ! | ATCTCACTTGGTGACACAAT+TGG | + | chr3.3:32098972-32098991 | MS.gene89411:CDS | 40.0% |
| ! | CTGCACGGAATATAGTCTTA+AGG | - | chr3.3:32097060-32097079 | None:intergenic | 40.0% |
| ! | GGTTGTTTCGAAATCTCACT+TGG | + | chr3.3:32098960-32098979 | MS.gene89411:CDS | 40.0% |
| ! | TATTGCGCTTTTGACCATAC+TGG | - | chr3.3:32097239-32097258 | None:intergenic | 40.0% |
| ! | TCTCACTTGGTGACACAATT+GGG | + | chr3.3:32098973-32098992 | MS.gene89411:CDS | 40.0% |
| ! | TGGTAATCTGAGGTACAAAG+TGG | - | chr3.3:32097219-32097238 | None:intergenic | 40.0% |
| !! | AGCCAAAAGCATTGGAACTA+CGG | - | chr3.3:32099565-32099584 | None:intergenic | 40.0% |
| !! | CTCTTGTTTGCCTTTTCCAA+GGG | - | chr3.3:32097116-32097135 | None:intergenic | 40.0% |
| !! | TCCAATGCTTTTGGCTGTAA+TGG | + | chr3.3:32099569-32099588 | MS.gene89411:CDS | 40.0% |
| !! | TCTCTTGTTTGCCTTTTCCA+AGG | - | chr3.3:32097117-32097136 | None:intergenic | 40.0% |
| !!! | CTAGTTTTGTGTCTCCCAAA+TGG | + | chr3.3:32097635-32097654 | MS.gene89411:CDS | 40.0% |
| !!! | GTTTTGAGATGATTTGGCAC+TGG | + | chr3.3:32098688-32098707 | MS.gene89411:intron | 40.0% |
| ACACAGCAGAAACATACCCT+TGG | + | chr3.3:32097097-32097116 | MS.gene89411:CDS | 45.0% | |
| ACAGGAACAGATGTTGAGAC+TGG | - | chr3.3:32098662-32098681 | None:intergenic | 45.0% | |
| AGAGTTCAGAGGTTCTCATC+TGG | + | chr3.3:32096805-32096824 | MS.gene89411:CDS | 45.0% | |
| AGCTCTCAATTCCAGTTCGA+GGG | + | chr3.3:32098354-32098373 | MS.gene89411:CDS | 45.0% | |
| ATATACCTGTGGGACCCATT+TGG | - | chr3.3:32097653-32097672 | None:intergenic | 45.0% | |
| ATTGGAAAGCTCATGCAAGC+TGG | + | chr3.3:32100320-32100339 | MS.gene89411:CDS | 45.0% | |
| CAAAATGCATACCCTCGAAC+TGG | - | chr3.3:32098368-32098387 | None:intergenic | 45.0% | |
| CAAGCAGTTCATAACCTGAG+AGG | + | chr3.3:32098082-32098101 | MS.gene89411:CDS | 45.0% | |
| GCAGCAGTACTTTCTGTTCA+AGG | + | chr3.3:32097298-32097317 | MS.gene89411:intron | 45.0% | |
| GGGAGACAAGAATGTTTGGA+AGG | - | chr3.3:32099650-32099669 | None:intergenic | 45.0% | |
| GTCCACTTCCATGACACATA+TGG | + | chr3.3:32099618-32099637 | MS.gene89411:CDS | 45.0% | |
| TATACCTGTGGGACCCATTT+GGG | - | chr3.3:32097652-32097671 | None:intergenic | 45.0% | |
| TCTGGCAGTCCAATCAAGAT+AGG | - | chr3.3:32099992-32100011 | None:intergenic | 45.0% | |
| TGGAGGGAGACAAGAATGTT+TGG | - | chr3.3:32099654-32099673 | None:intergenic | 45.0% | |
| TTGCCACAGTCATGTATCTC+TGG | - | chr3.3:32100010-32100029 | None:intergenic | 45.0% | |
| TTGGACTGAAAGAGTCACCT+CGG | - | chr3.3:32097146-32097165 | None:intergenic | 45.0% | |
| TTTCATCGTGTTTCTCCCTG+TGG | - | chr3.3:32097178-32097197 | None:intergenic | 45.0% | |
| ! | ATCCCATTGGTTGAATCACC+TGG | - | chr3.3:32100483-32100502 | None:intergenic | 45.0% |
| ! | CACCGTAGTTCCAATGCTTT+TGG | + | chr3.3:32099560-32099579 | MS.gene89411:CDS | 45.0% |
| ! | CTCACTTGGTGACACAATTG+GGG | + | chr3.3:32098974-32098993 | MS.gene89411:CDS | 45.0% |
| ! | GATTCTTCAGTTGCTGGTCT+TGG | + | chr3.3:32100203-32100222 | MS.gene89411:CDS | 45.0% |
| ! | GCCATTACAGCCAAAAGCAT+TGG | - | chr3.3:32099573-32099592 | None:intergenic | 45.0% |
| ! | GGGTCTTGGTTCTTCACTTT+AGG | - | chr3.3:32099165-32099184 | None:intergenic | 45.0% |
| ! | GTGTACATGCTGAATGGACT+TGG | + | chr3.3:32100278-32100297 | MS.gene89411:CDS | 45.0% |
| ! | TGGACAGCAAGCTTTTCTGT+TGG | - | chr3.3:32099603-32099622 | None:intergenic | 45.0% |
| !! | ATCAGCAGTGACTCGGTTAA+GGG | - | chr3.3:32100399-32100418 | None:intergenic | 45.0% |
| !!! | GCTACTTTTGATGGAGGAAC+CGG | - | chr3.3:32098912-32098931 | None:intergenic | 45.0% |
| AATGGCAGTCTTTGAGCCAG+AGG | - | chr3.3:32100375-32100394 | None:intergenic | 50.0% | |
| ACTTCATCGGCAAGCAGTTG+GGG | + | chr3.3:32100345-32100364 | MS.gene89411:intron | 50.0% | |
| AGTCCAAGGACTATGACCAC+AGG | + | chr3.3:32097159-32097178 | MS.gene89411:CDS | 50.0% | |
| ATGCAAGCTGGCGACTTCAT+CGG | + | chr3.3:32100332-32100351 | MS.gene89411:CDS | 50.0% | |
| ATGGCAGTCTTTGAGCCAGA+GGG | - | chr3.3:32100374-32100393 | None:intergenic | 50.0% | |
| CAAACAAGAGACATGTCCCG+AGG | + | chr3.3:32097126-32097145 | MS.gene89411:CDS | 50.0% | |
| CTGCCAGAGATACATGACTG+TGG | + | chr3.3:32100004-32100023 | MS.gene89411:intron | 50.0% | |
| CTGTCCATGGTACTCATGCT+TGG | - | chr3.3:32096787-32096806 | None:intergenic | 50.0% | |
| CTTCGCCGTCTCTCTGTATA+GGG | - | chr3.3:32099207-32099226 | None:intergenic | 50.0% | |
| GAACCTCTGAACTCTGTCCA+TGG | - | chr3.3:32096800-32096819 | None:intergenic | 50.0% | |
| GACTTCATCGGCAAGCAGTT+GGG | + | chr3.3:32100344-32100363 | MS.gene89411:intron | 50.0% | |
| GAGCTCTCAATTCCAGTTCG+AGG | + | chr3.3:32098353-32098372 | MS.gene89411:CDS | 50.0% | |
| GAGGTGACTCTTTCAGTCCA+AGG | + | chr3.3:32097145-32097164 | MS.gene89411:CDS | 50.0% | |
| GCCCATATGTGTCATGGAAG+TGG | - | chr3.3:32099623-32099642 | None:intergenic | 50.0% | |
| GCTGTGGATTCTTCAGTTGC+TGG | + | chr3.3:32100197-32100216 | MS.gene89411:CDS | 50.0% | |
| GGCATCAGGAAATGTAGCGA+CGG | + | chr3.3:32100247-32100266 | MS.gene89411:CDS | 50.0% | |
| GGGATTGCCCATATGTGTCA+TGG | - | chr3.3:32099629-32099648 | None:intergenic | 50.0% | |
| GGTGGCTGTCCATATGCTAA+GGG | + | chr3.3:32100224-32100243 | MS.gene89411:CDS | 50.0% | |
| GTACCATGGACAGAGTTCAG+AGG | + | chr3.3:32096794-32096813 | MS.gene89411:CDS | 50.0% | |
| GTCCAAGGACTATGACCACA+GGG | + | chr3.3:32097160-32097179 | MS.gene89411:CDS | 50.0% | |
| GTGGCTGTCCATATGCTAAG+GGG | + | chr3.3:32100225-32100244 | MS.gene89411:CDS | 50.0% | |
| GTTGAAGTTGGACCAAGGGA+TGG | + | chr3.3:32097520-32097539 | MS.gene89411:CDS | 50.0% | |
| GTTGTTGGATGCCCAGTTGA+AGG | + | chr3.3:32098885-32098904 | MS.gene89411:CDS | 50.0% | |
| TCAAGTTTGGAGGAGCCACT+TGG | + | chr3.3:32096748-32096767 | MS.gene89411:CDS | 50.0% | |
| TCAATCAGGTCAAGCCGTCA+AGG | + | chr3.3:32098734-32098753 | MS.gene89411:intron | 50.0% | |
| TCATGCTTGGCAGCTTGTCA+TGG | - | chr3.3:32096774-32096793 | None:intergenic | 50.0% | |
| TCTTCGCCGTCTCTCTGTAT+AGG | - | chr3.3:32099208-32099227 | None:intergenic | 50.0% | |
| TGGACTGAAAGAGTCACCTC+GGG | - | chr3.3:32097145-32097164 | None:intergenic | 50.0% | |
| TGGCTGTCCATATGCTAAGG+GGG | + | chr3.3:32100226-32100245 | MS.gene89411:CDS | 50.0% | |
| TGGTGGCTGTCCATATGCTA+AGG | + | chr3.3:32100223-32100242 | MS.gene89411:CDS | 50.0% | |
| ! | CTTGGTGACACAATTGGGGT+AGG | + | chr3.3:32098978-32098997 | MS.gene89411:CDS | 50.0% |
| ! | TTTGAAGCTGCTGTTGCTGC+TGG | + | chr3.3:32098215-32098234 | MS.gene89411:CDS | 50.0% |
| !! | AGTGACTCGGTTAAGGGCAA+TGG | - | chr3.3:32100393-32100412 | None:intergenic | 50.0% |
| !! | CATCAGCAGTGACTCGGTTA+AGG | - | chr3.3:32100400-32100419 | None:intergenic | 50.0% |
| !! | TCTTCAGTTGCTGGTCTTGG+TGG | + | chr3.3:32100206-32100225 | MS.gene89411:CDS | 50.0% |
| !! | TGGAAGCATCAGCAGTGACT+CGG | - | chr3.3:32100406-32100425 | None:intergenic | 50.0% |
| ACAATTGGGGTAGGCACACC+AGG | + | chr3.3:32098987-32099006 | MS.gene89411:CDS | 55.0% | |
| ACGAGTGACAGCTCGATAGC+GGG | - | chr3.3:32098324-32098343 | None:intergenic | 55.0% | |
| CACGAGTGACAGCTCGATAG+CGG | - | chr3.3:32098325-32098344 | None:intergenic | 55.0% | |
| CCTGATGCCCCCTTAGCATA+TGG | - | chr3.3:32100236-32100255 | None:intergenic | 55.0% | |
| CGACTTCATCGGCAAGCAGT+TGG | + | chr3.3:32100343-32100362 | MS.gene89411:intron | 55.0% | |
| CTCCCTGTGGTCATAGTCCT+TGG | - | chr3.3:32097165-32097184 | None:intergenic | 55.0% | |
| CTGGCAATCTGATGCCTCTC+AGG | - | chr3.3:32098099-32098118 | None:intergenic | 55.0% | |
| GAGGAACCGGTCCTTCAACT+GGG | - | chr3.3:32098899-32098918 | None:intergenic | 55.0% | |
| GCTGCCAAGCATGAGTACCA+TGG | + | chr3.3:32096780-32096799 | MS.gene89411:CDS | 55.0% | |
| TGCATGGCTGCGGCAAATTC+AGG | - | chr3.3:32099884-32099903 | None:intergenic | 55.0% | |
| TGGATGCCCAGTTGAAGGAC+CGG | + | chr3.3:32098890-32098909 | MS.gene89411:CDS | 55.0% | |
| TGGCAGTCTTTGAGCCAGAG+GGG | - | chr3.3:32100373-32100392 | None:intergenic | 55.0% | |
| !! | CCATATGCTAAGGGGGCATC+AGG | + | chr3.3:32100233-32100252 | MS.gene89411:CDS | 55.0% |
| AGCCCTGACATGCATGGCTG+CGG | - | chr3.3:32099894-32099913 | None:intergenic | 60.0% | |
| GGAGGAACCGGTCCTTCAAC+TGG | - | chr3.3:32098900-32098919 | None:intergenic | 60.0% | |
| GGCAGCTTGTCATGGCCAAG+TGG | - | chr3.3:32096766-32096785 | None:intergenic | 60.0% | |
| GTCTCCCAAATGGGTCCCAC+AGG | + | chr3.3:32097645-32097664 | MS.gene89411:CDS | 60.0% | |
| TCAGGCAGCCCTGACATGCA+TGG | - | chr3.3:32099900-32099919 | None:intergenic | 60.0% | |
| TGCCGCAGCCATGCATGTCA+GGG | + | chr3.3:32099889-32099908 | MS.gene89411:intron | 60.0% | |
| TTGCCGCAGCCATGCATGTC+AGG | + | chr3.3:32099888-32099907 | MS.gene89411:intron | 60.0% | |
| ! | AAGCAGTTGGGGCGCCCCTC+TGG | + | chr3.3:32100356-32100375 | MS.gene89411:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 32096745 | 32100589 | 32096745 | ID=MS.gene89411 |
| chr3.3 | mRNA | 32096745 | 32100589 | 32096745 | ID=MS.gene89411.t1;Parent=MS.gene89411 |
| chr3.3 | exon | 32096745 | 32096911 | 32096745 | ID=MS.gene89411.t1.exon1;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32096745 | 32096911 | 32096745 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32097080 | 32097287 | 32097080 | ID=MS.gene89411.t1.exon2;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32097080 | 32097287 | 32097080 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32097487 | 32097666 | 32097487 | ID=MS.gene89411.t1.exon3;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32097487 | 32097666 | 32097487 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32098058 | 32098138 | 32098058 | ID=MS.gene89411.t1.exon4;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32098058 | 32098138 | 32098058 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32098212 | 32098375 | 32098212 | ID=MS.gene89411.t1.exon5;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32098212 | 32098375 | 32098212 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32098872 | 32099008 | 32098872 | ID=MS.gene89411.t1.exon6;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32098872 | 32099008 | 32098872 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32099559 | 32099674 | 32099559 | ID=MS.gene89411.t1.exon7;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32099559 | 32099674 | 32099559 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32100185 | 32100360 | 32100185 | ID=MS.gene89411.t1.exon8;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32100185 | 32100360 | 32100185 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| chr3.3 | exon | 32100547 | 32100589 | 32100547 | ID=MS.gene89411.t1.exon9;Parent=MS.gene89411.t1 |
| chr3.3 | CDS | 32100547 | 32100589 | 32100547 | ID=cds.MS.gene89411.t1;Parent=MS.gene89411.t1 |
| Gene Sequence |
| Protein sequence |
