Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89973.t1 | XP_003606284.1 | 97 | 462 | 14 | 0 | 1 | 462 | 1 | 462 | 3.50E-254 | 887.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89973.t1 | F4HW02 | 69.8 | 434 | 129 | 1 | 31 | 462 | 18 | 451 | 6.2e-175 | 615.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89973.t1 | G7JM48 | 97.0 | 462 | 14 | 0 | 1 | 462 | 1 | 462 | 2.5e-254 | 887.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056849 | MS.gene89973 | 0.813665 | 2.28E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89973.t1 | MTR_4g055610 | 96.970 | 462 | 14 | 0 | 1 | 462 | 1 | 462 | 0.0 | 924 |
MS.gene89973.t1 | MTR_1g492640 | 58.925 | 465 | 184 | 2 | 1 | 461 | 19 | 480 | 0.0 | 590 |
MS.gene89973.t1 | MTR_1g492640 | 59.483 | 348 | 141 | 0 | 114 | 461 | 1 | 348 | 1.47e-159 | 455 |
MS.gene89973.t1 | MTR_8g099320 | 48.879 | 446 | 223 | 2 | 15 | 459 | 6 | 447 | 7.88e-156 | 450 |
MS.gene89973.t1 | MTR_1g492640 | 59.701 | 335 | 128 | 2 | 1 | 331 | 1 | 332 | 4.88e-150 | 432 |
MS.gene89973.t1 | MTR_1g492640 | 59.701 | 335 | 128 | 2 | 1 | 331 | 19 | 350 | 5.90e-150 | 432 |
MS.gene89973.t1 | MTR_4g055637 | 90.196 | 204 | 13 | 1 | 259 | 462 | 182 | 378 | 2.02e-118 | 352 |
MS.gene89973.t1 | MTR_1g492640 | 55.274 | 237 | 96 | 3 | 1 | 233 | 1 | 231 | 1.20e-89 | 274 |
MS.gene89973.t1 | MTR_1g492640 | 55.274 | 237 | 96 | 3 | 1 | 233 | 19 | 249 | 1.76e-89 | 274 |
MS.gene89973.t1 | MTR_1g070470 | 33.040 | 454 | 280 | 7 | 15 | 462 | 5 | 440 | 2.47e-82 | 261 |
MS.gene89973.t1 | MTR_6g022790 | 29.310 | 464 | 298 | 11 | 6 | 460 | 13 | 455 | 8.65e-61 | 205 |
MS.gene89973.t1 | MTR_2g101920 | 28.059 | 474 | 312 | 10 | 1 | 459 | 1 | 460 | 3.92e-55 | 190 |
MS.gene89973.t1 | MTR_4g103890 | 31.026 | 419 | 268 | 8 | 47 | 458 | 17 | 421 | 5.71e-54 | 186 |
MS.gene89973.t1 | MTR_8g080120 | 28.222 | 450 | 296 | 10 | 21 | 460 | 4 | 436 | 1.42e-51 | 180 |
MS.gene89973.t1 | MTR_7g038910 | 30.064 | 469 | 293 | 11 | 1 | 460 | 1 | 443 | 4.01e-51 | 179 |
MS.gene89973.t1 | MTR_6g022780 | 31.081 | 444 | 280 | 10 | 26 | 460 | 2 | 428 | 7.16e-49 | 173 |
MS.gene89973.t1 | MTR_6g023065 | 28.233 | 464 | 299 | 11 | 6 | 460 | 25 | 463 | 1.92e-48 | 172 |
MS.gene89973.t1 | MTR_5g081630 | 30.479 | 397 | 254 | 9 | 71 | 462 | 4 | 383 | 1.17e-47 | 169 |
MS.gene89973.t1 | MTR_6g023075 | 30.679 | 427 | 272 | 9 | 43 | 460 | 17 | 428 | 1.82e-47 | 169 |
MS.gene89973.t1 | MTR_5g054730 | 28.603 | 451 | 283 | 12 | 23 | 459 | 13 | 438 | 1.17e-44 | 162 |
MS.gene89973.t1 | MTR_7g038910 | 30.618 | 356 | 215 | 9 | 1 | 347 | 1 | 333 | 1.80e-43 | 157 |
MS.gene89973.t1 | MTR_4g104510 | 28.633 | 461 | 306 | 12 | 11 | 462 | 4 | 450 | 2.08e-43 | 159 |
MS.gene89973.t1 | MTR_7g038910 | 30.618 | 356 | 215 | 9 | 1 | 347 | 1 | 333 | 2.31e-43 | 157 |
MS.gene89973.t1 | MTR_4g104510 | 27.983 | 461 | 307 | 12 | 11 | 462 | 4 | 448 | 2.49e-43 | 158 |
MS.gene89973.t1 | MTR_2g096830 | 28.634 | 454 | 288 | 10 | 16 | 460 | 2 | 428 | 2.86e-42 | 155 |
MS.gene89973.t1 | MTR_1g093030 | 28.188 | 447 | 294 | 11 | 21 | 459 | 9 | 436 | 2.84e-41 | 152 |
MS.gene89973.t1 | MTR_1g105995 | 29.140 | 477 | 284 | 17 | 21 | 459 | 6 | 466 | 4.95e-41 | 152 |
MS.gene89973.t1 | MTR_3g005740 | 26.625 | 477 | 294 | 15 | 16 | 460 | 17 | 469 | 1.17e-40 | 152 |
MS.gene89973.t1 | MTR_1g093020 | 27.273 | 451 | 293 | 11 | 21 | 459 | 9 | 436 | 2.52e-40 | 150 |
MS.gene89973.t1 | MTR_1g105990 | 29.289 | 478 | 283 | 18 | 21 | 458 | 6 | 468 | 3.53e-40 | 150 |
MS.gene89973.t1 | MTR_3g085820 | 28.307 | 378 | 246 | 10 | 11 | 381 | 8 | 367 | 1.71e-39 | 147 |
MS.gene89973.t1 | MTR_3g069960 | 29.870 | 385 | 242 | 11 | 86 | 462 | 19 | 383 | 4.76e-39 | 145 |
MS.gene89973.t1 | MTR_3g069960 | 29.870 | 385 | 242 | 11 | 86 | 462 | 72 | 436 | 7.28e-39 | 146 |
MS.gene89973.t1 | MTR_3g115090 | 28.941 | 425 | 275 | 12 | 42 | 450 | 86 | 499 | 2.05e-38 | 146 |
MS.gene89973.t1 | MTR_3g096800 | 26.305 | 498 | 304 | 14 | 4 | 461 | 1 | 475 | 2.32e-38 | 145 |
MS.gene89973.t1 | MTR_1g093020 | 28.162 | 419 | 266 | 11 | 21 | 427 | 9 | 404 | 3.48e-38 | 144 |
MS.gene89973.t1 | MTR_1g105980 | 26.891 | 476 | 296 | 16 | 21 | 459 | 7 | 467 | 6.19e-37 | 141 |
MS.gene89973.t1 | MTR_1g106000 | 27.195 | 467 | 287 | 14 | 39 | 461 | 14 | 471 | 9.22e-37 | 141 |
MS.gene89973.t1 | MTR_1g029750 | 29.680 | 438 | 259 | 16 | 13 | 411 | 4 | 431 | 7.76e-36 | 139 |
MS.gene89973.t1 | MTR_3g088455 | 27.572 | 486 | 310 | 15 | 7 | 462 | 5 | 478 | 1.59e-35 | 137 |
MS.gene89973.t1 | MTR_1g007270 | 28.270 | 474 | 283 | 19 | 13 | 447 | 2 | 457 | 2.03e-35 | 137 |
MS.gene89973.t1 | MTR_3g110660 | 26.653 | 499 | 292 | 18 | 13 | 459 | 2 | 478 | 4.28e-35 | 136 |
MS.gene89973.t1 | MTR_0531s0020 | 30.032 | 313 | 197 | 8 | 28 | 331 | 37 | 336 | 2.24e-34 | 132 |
MS.gene89973.t1 | MTR_4g073520 | 27.105 | 487 | 300 | 17 | 14 | 459 | 36 | 508 | 3.53e-34 | 134 |
MS.gene89973.t1 | MTR_4g073520 | 27.105 | 487 | 300 | 17 | 14 | 459 | 36 | 508 | 4.34e-34 | 134 |
MS.gene89973.t1 | MTR_3g088475 | 26.694 | 487 | 314 | 15 | 7 | 462 | 5 | 479 | 9.03e-34 | 132 |
MS.gene89973.t1 | MTR_2g096830 | 28.297 | 364 | 220 | 10 | 16 | 363 | 2 | 340 | 1.14e-33 | 130 |
MS.gene89973.t1 | MTR_3g096840 | 26.096 | 479 | 293 | 16 | 21 | 460 | 24 | 480 | 2.81e-33 | 131 |
MS.gene89973.t1 | MTR_1g007380 | 27.021 | 470 | 271 | 16 | 25 | 444 | 12 | 459 | 7.02e-33 | 130 |
MS.gene89973.t1 | MTR_3g096830 | 27.133 | 457 | 280 | 14 | 39 | 459 | 25 | 464 | 9.63e-32 | 127 |
MS.gene89973.t1 | MTR_3g110420 | 26.349 | 482 | 306 | 15 | 10 | 459 | 3 | 467 | 2.74e-31 | 125 |
MS.gene89973.t1 | MTR_5g023260 | 27.434 | 452 | 285 | 15 | 32 | 459 | 99 | 531 | 2.81e-31 | 126 |
MS.gene89973.t1 | MTR_5g023240 | 25.835 | 449 | 295 | 13 | 32 | 459 | 78 | 509 | 3.14e-31 | 126 |
MS.gene89973.t1 | MTR_4g075750 | 26.824 | 466 | 301 | 15 | 8 | 449 | 40 | 489 | 8.50e-31 | 124 |
MS.gene89973.t1 | MTR_8g094290 | 27.313 | 454 | 289 | 15 | 39 | 461 | 30 | 473 | 2.01e-29 | 120 |
MS.gene89973.t1 | MTR_4g033275 | 50.526 | 95 | 47 | 0 | 337 | 431 | 7 | 101 | 1.20e-27 | 106 |
MS.gene89973.t1 | MTR_3g461470 | 27.725 | 422 | 263 | 15 | 21 | 411 | 6 | 416 | 3.19e-26 | 111 |
MS.gene89973.t1 | MTR_1g007240 | 23.591 | 479 | 296 | 17 | 26 | 460 | 2 | 454 | 2.92e-25 | 108 |
MS.gene89973.t1 | MTR_5g096840 | 27.123 | 424 | 260 | 15 | 24 | 411 | 13 | 423 | 4.81e-25 | 107 |
MS.gene89973.t1 | MTR_3g461440 | 27.488 | 422 | 264 | 15 | 21 | 411 | 6 | 416 | 6.72e-25 | 107 |
MS.gene89973.t1 | MTR_3g461430 | 27.041 | 392 | 246 | 15 | 51 | 411 | 41 | 423 | 2.84e-24 | 105 |
MS.gene89973.t1 | MTR_3g110660 | 26.496 | 351 | 210 | 12 | 13 | 331 | 2 | 336 | 5.65e-24 | 103 |
MS.gene89973.t1 | MTR_2g012470 | 23.684 | 456 | 306 | 12 | 32 | 459 | 76 | 517 | 4.13e-23 | 102 |
MS.gene89973.t1 | MTR_3g061390 | 27.907 | 430 | 261 | 18 | 16 | 411 | 2 | 416 | 1.59e-22 | 100 |
MS.gene89973.t1 | MTR_1g007180 | 24.319 | 477 | 295 | 18 | 26 | 460 | 2 | 454 | 2.09e-22 | 99.8 |
MS.gene89973.t1 | MTR_3g110430 | 25.255 | 491 | 309 | 17 | 5 | 450 | 19 | 496 | 2.39e-20 | 94.0 |
MS.gene89973.t1 | MTR_3g088465 | 26.064 | 376 | 246 | 14 | 7 | 363 | 5 | 367 | 3.35e-20 | 92.8 |
MS.gene89973.t1 | MTR_3g110420 | 26.814 | 317 | 200 | 10 | 10 | 307 | 3 | 306 | 7.03e-20 | 90.9 |
MS.gene89973.t1 | MTR_2g031750 | 23.894 | 452 | 282 | 16 | 51 | 460 | 23 | 454 | 1.01e-19 | 91.7 |
MS.gene89973.t1 | MTR_3g069960 | 28.340 | 247 | 162 | 7 | 86 | 330 | 72 | 305 | 1.84e-19 | 89.7 |
MS.gene89973.t1 | MTR_5g096850 | 25.847 | 472 | 302 | 20 | 13 | 452 | 5 | 460 | 2.39e-19 | 90.5 |
MS.gene89973.t1 | MTR_3g461440 | 26.616 | 263 | 168 | 8 | 169 | 411 | 22 | 279 | 5.30e-14 | 73.2 |
MS.gene89973.t1 | MTR_7g067450 | 23.218 | 435 | 283 | 13 | 4 | 418 | 1 | 404 | 1.21e-13 | 73.2 |
MS.gene89973.t1 | MTR_4g415390 | 25.510 | 392 | 239 | 16 | 44 | 419 | 51 | 405 | 4.25e-13 | 71.2 |
MS.gene89973.t1 | MTR_4g073770 | 23.940 | 401 | 268 | 13 | 29 | 419 | 28 | 401 | 5.30e-13 | 71.2 |
MS.gene89973.t1 | MTR_4g415390 | 25.510 | 392 | 239 | 16 | 44 | 419 | 51 | 405 | 6.15e-13 | 70.9 |
MS.gene89973.t1 | MTR_5g082220 | 24.557 | 395 | 239 | 14 | 44 | 419 | 50 | 404 | 7.56e-13 | 70.9 |
MS.gene89973.t1 | MTR_8g467180 | 22.115 | 416 | 271 | 16 | 14 | 420 | 2 | 373 | 9.76e-13 | 70.1 |
MS.gene89973.t1 | MTR_5g082220 | 24.557 | 395 | 239 | 14 | 44 | 419 | 40 | 394 | 1.06e-12 | 70.1 |
MS.gene89973.t1 | MTR_3g072870 | 22.654 | 437 | 282 | 16 | 3 | 423 | 8 | 404 | 1.15e-12 | 70.1 |
MS.gene89973.t1 | MTR_2g031750 | 24.224 | 322 | 199 | 11 | 169 | 460 | 81 | 387 | 2.22e-12 | 68.9 |
MS.gene89973.t1 | MTR_1g007180 | 24.606 | 317 | 186 | 13 | 178 | 460 | 73 | 370 | 2.63e-12 | 68.6 |
MS.gene89973.t1 | MTR_5g017200 | 26.848 | 257 | 164 | 9 | 19 | 264 | 14 | 257 | 2.08e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89973.t1 | AT1G08230 | 69.336 | 437 | 132 | 1 | 28 | 462 | 15 | 451 | 0.0 | 609 |
MS.gene89973.t1 | AT1G08230 | 68.091 | 351 | 110 | 1 | 114 | 462 | 1 | 351 | 5.56e-170 | 482 |
MS.gene89973.t1 | AT1G08230 | 67.976 | 331 | 104 | 1 | 134 | 462 | 2 | 332 | 2.25e-157 | 449 |
MS.gene89973.t1 | AT1G08230 | 67.976 | 331 | 104 | 1 | 134 | 462 | 2 | 332 | 2.25e-157 | 449 |
MS.gene89973.t1 | AT1G08230 | 67.976 | 331 | 104 | 1 | 134 | 462 | 2 | 332 | 2.25e-157 | 449 |
MS.gene89973.t1 | AT5G41800 | 48.730 | 433 | 221 | 1 | 30 | 461 | 16 | 448 | 1.78e-150 | 436 |
MS.gene89973.t1 | AT5G40780 | 28.976 | 459 | 296 | 11 | 11 | 460 | 9 | 446 | 6.02e-57 | 195 |
MS.gene89973.t1 | AT2G39890 | 32.468 | 462 | 283 | 13 | 9 | 462 | 2 | 442 | 6.03e-57 | 195 |
MS.gene89973.t1 | AT2G39890 | 32.468 | 462 | 283 | 13 | 9 | 462 | 2 | 442 | 6.03e-57 | 195 |
MS.gene89973.t1 | AT1G48640 | 29.386 | 456 | 295 | 12 | 16 | 460 | 14 | 453 | 8.26e-55 | 189 |
MS.gene89973.t1 | AT3G55740 | 31.072 | 457 | 289 | 11 | 13 | 462 | 2 | 439 | 1.30e-54 | 189 |
MS.gene89973.t1 | AT2G39890 | 33.501 | 397 | 242 | 10 | 71 | 462 | 4 | 383 | 2.32e-54 | 186 |
MS.gene89973.t1 | AT3G55740 | 31.818 | 396 | 250 | 8 | 71 | 462 | 4 | 383 | 8.91e-53 | 182 |
MS.gene89973.t1 | AT3G55740 | 31.818 | 396 | 250 | 8 | 71 | 462 | 4 | 383 | 8.91e-53 | 182 |
MS.gene89973.t1 | AT5G40780 | 30.193 | 414 | 264 | 10 | 56 | 460 | 1 | 398 | 3.86e-52 | 181 |
MS.gene89973.t1 | AT5G40780 | 30.193 | 414 | 264 | 10 | 56 | 460 | 1 | 398 | 3.86e-52 | 181 |
MS.gene89973.t1 | AT2G36590 | 33.256 | 430 | 260 | 12 | 41 | 462 | 26 | 436 | 1.07e-51 | 181 |
MS.gene89973.t1 | AT1G24400 | 30.000 | 440 | 287 | 9 | 28 | 460 | 16 | 441 | 9.72e-51 | 178 |
MS.gene89973.t1 | AT1G67640 | 30.568 | 458 | 290 | 11 | 13 | 460 | 2 | 441 | 3.16e-47 | 169 |
MS.gene89973.t1 | AT1G71680 | 27.669 | 459 | 311 | 10 | 9 | 460 | 4 | 448 | 8.10e-46 | 165 |
MS.gene89973.t1 | AT1G61270 | 27.778 | 432 | 288 | 10 | 24 | 444 | 17 | 435 | 3.13e-44 | 161 |
MS.gene89973.t1 | AT1G25530 | 29.343 | 426 | 276 | 10 | 44 | 460 | 31 | 440 | 6.91e-42 | 154 |
MS.gene89973.t1 | AT3G01760 | 25.503 | 447 | 311 | 8 | 18 | 455 | 9 | 442 | 6.08e-41 | 152 |
MS.gene89973.t1 | AT1G71680 | 28.108 | 370 | 245 | 10 | 9 | 371 | 4 | 359 | 3.99e-37 | 140 |
MS.gene89973.t1 | AT5G09220 | 27.957 | 465 | 276 | 15 | 39 | 461 | 44 | 491 | 9.04e-35 | 135 |
MS.gene89973.t1 | AT2G36590 | 31.633 | 294 | 183 | 8 | 41 | 330 | 26 | 305 | 1.10e-32 | 127 |
MS.gene89973.t1 | AT1G10010 | 26.526 | 475 | 298 | 15 | 25 | 462 | 15 | 475 | 2.87e-32 | 128 |
MS.gene89973.t1 | AT1G10010 | 26.526 | 475 | 298 | 15 | 25 | 462 | 14 | 474 | 2.94e-32 | 128 |
MS.gene89973.t1 | AT5G63850 | 26.782 | 463 | 280 | 15 | 39 | 459 | 17 | 462 | 5.89e-31 | 124 |
MS.gene89973.t1 | AT1G77380 | 26.813 | 455 | 287 | 16 | 40 | 459 | 29 | 472 | 8.25e-31 | 124 |
MS.gene89973.t1 | AT1G58360 | 25.833 | 480 | 316 | 16 | 11 | 459 | 10 | 480 | 8.83e-31 | 124 |
MS.gene89973.t1 | AT5G49630 | 26.016 | 492 | 307 | 17 | 4 | 459 | 8 | 478 | 7.84e-28 | 115 |
MS.gene89973.t1 | AT1G44100 | 26.144 | 459 | 291 | 15 | 40 | 459 | 27 | 476 | 6.75e-27 | 113 |
MS.gene89973.t1 | AT4G35180 | 24.113 | 423 | 291 | 15 | 42 | 449 | 59 | 466 | 2.11e-22 | 100 |
MS.gene89973.t1 | AT1G47670 | 24.937 | 397 | 268 | 10 | 62 | 438 | 115 | 501 | 3.71e-22 | 99.8 |
MS.gene89973.t1 | AT5G23810 | 27.735 | 393 | 241 | 15 | 51 | 408 | 36 | 420 | 2.90e-20 | 93.6 |
MS.gene89973.t1 | AT4G35180 | 26.217 | 267 | 179 | 9 | 42 | 298 | 59 | 317 | 2.59e-17 | 83.6 |
MS.gene89973.t1 | AT1G77690 | 23.571 | 420 | 266 | 15 | 22 | 418 | 15 | 402 | 7.99e-14 | 73.9 |
MS.gene89973.t1 | AT5G23810 | 27.759 | 299 | 191 | 11 | 51 | 331 | 36 | 327 | 9.69e-13 | 69.7 |
MS.gene89973.t1 | AT5G01240 | 24.638 | 414 | 260 | 15 | 26 | 419 | 30 | 411 | 9.92e-13 | 70.5 |
MS.gene89973.t1 | AT2G21050 | 23.953 | 430 | 270 | 15 | 13 | 418 | 2 | 398 | 6.31e-12 | 67.8 |
MS.gene89973.t1 | AT2G38120 | 23.716 | 409 | 267 | 14 | 25 | 419 | 28 | 405 | 2.22e-11 | 66.2 |
MS.gene89973.t1 | AT2G38120 | 23.716 | 409 | 267 | 14 | 25 | 419 | 28 | 405 | 2.64e-11 | 65.9 |
MS.gene89973.t1 | AT5G15240 | 24.091 | 440 | 287 | 18 | 23 | 452 | 16 | 418 | 9.97e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATACAGAAAATCGCTTATT+TGG | 0.132045 | 4.2:-47901521 | MS.gene89973:CDS |
CTCATCCATACCTGAATTTC+AGG | 0.168281 | 4.2:+47901446 | None:intergenic |
TTCGAGTTTGTCATCATATT+TGG | 0.193305 | 4.2:-47901818 | MS.gene89973:CDS |
GAAAAGAATTATTCTTTAAA+AGG | 0.202646 | 4.2:-47901545 | MS.gene89973:CDS |
ATTCCTACAATTTATTATCT+AGG | 0.222294 | 4.2:-47908440 | MS.gene89973:CDS |
TTCTTTAGTGTTGCCATATC+TGG | 0.227345 | 4.2:-47901142 | MS.gene89973:CDS |
AACTCACTCATTGGAGCTTT+TGG | 0.236217 | 4.2:-47900449 | MS.gene89973:CDS |
ACACATTAATCTTGTGTCTT+TGG | 0.256237 | 4.2:-47901747 | MS.gene89973:CDS |
CCATATGCTTTCACATTACT+TGG | 0.272864 | 4.2:-47908513 | MS.gene89973:CDS |
TGTTGCCATATCTGGTTATT+GGG | 0.285842 | 4.2:-47901134 | MS.gene89973:CDS |
TGGTTGCTTCATGTTGATTT+TGG | 0.288297 | 4.2:-47901798 | MS.gene89973:CDS |
GTGTTGCCATATCTGGTTAT+TGG | 0.298976 | 4.2:-47901135 | MS.gene89973:CDS |
TTGAACATCTTCCCTTTAAC+TGG | 0.310835 | 4.2:+47901202 | None:intergenic |
ACGTTAGCACCACCAGTTAA+AGG | 0.314336 | 4.2:-47901214 | MS.gene89973:CDS |
TGGAATCATTCCTGAAATTC+AGG | 0.318477 | 4.2:-47901456 | MS.gene89973:intron |
GAAGTGTTAGAGCAAACATT+TGG | 0.321803 | 4.2:-47900590 | MS.gene89973:CDS |
ATAAACCACTTGGGCACTAA+TGG | 0.324963 | 4.2:+47901055 | None:intergenic |
TGCTCTAACACTTCATTTGT+AGG | 0.333827 | 4.2:+47900599 | None:intergenic |
ATATCTGGTTATTGGGCATT+TGG | 0.336128 | 4.2:-47901127 | MS.gene89973:CDS |
TGGAAGCATGGCTGCTATAA+TGG | 0.350989 | 4.2:+47900487 | None:intergenic |
CCACAAAGTTGCTTAAGATT+AGG | 0.353612 | 4.2:+47901089 | None:intergenic |
AAAATGAGGCTTCTCTTAGA+TGG | 0.357588 | 4.2:+47900371 | None:intergenic |
AAAAGCTTCATAGACCCATT+TGG | 0.359878 | 4.2:+47901839 | None:intergenic |
AAAGCTTCATAGACCCATTT+GGG | 0.368588 | 4.2:+47901840 | None:intergenic |
TAATCCCCAGACTGATTTCC+CGG | 0.376077 | 4.2:-47900532 | MS.gene89973:CDS |
TAACATTGGTAGGTCCTAGA+TGG | 0.382721 | 4.2:-47902097 | MS.gene89973:intron |
AAGTGTTAGAGCAAACATTT+GGG | 0.383439 | 4.2:-47900589 | MS.gene89973:CDS |
ATTGCCACAACCTACGGAAA+TGG | 0.393694 | 4.2:-47901476 | MS.gene89973:CDS |
CCAAGTAATGTGAAAGCATA+TGG | 0.400422 | 4.2:+47908513 | None:intergenic |
AAATGCCCAATAACCAGATA+TGG | 0.404001 | 4.2:+47901129 | None:intergenic |
TAGTGACCGGGAAATCAGTC+TGG | 0.404024 | 4.2:+47900526 | None:intergenic |
TAGCATACTGCAAACTGAAT+TGG | 0.416555 | 4.2:+47902056 | None:intergenic |
TTCCTACAATTTATTATCTA+GGG | 0.418266 | 4.2:-47908439 | MS.gene89973:CDS |
CCTAATCTTAAGCAACTTTG+TGG | 0.421683 | 4.2:-47901089 | MS.gene89973:CDS |
TTTCTTAGTTATTGCAGCTA+TGG | 0.424487 | 4.2:-47908472 | MS.gene89973:CDS |
GGGGACATAAACTCACTCAT+TGG | 0.428488 | 4.2:-47900458 | MS.gene89973:CDS |
AACCGCTGATAATTGTACTA+TGG | 0.432624 | 4.2:+47901012 | None:intergenic |
GCTGCTGGTTCTATATATAT+TGG | 0.432817 | 4.2:-47901695 | MS.gene89973:intron |
ACAAAATAGCGACCCCATCT+AGG | 0.433917 | 4.2:+47902083 | None:intergenic |
TCATGTTCTGCTGTTGAGCT+TGG | 0.442497 | 4.2:+47910178 | None:intergenic |
TATGTGTTGTCAAACCCAAA+TGG | 0.444659 | 4.2:-47901854 | MS.gene89973:CDS |
CTGCTGTTGAGCTTGGAAGC+AGG | 0.448537 | 4.2:+47910185 | None:intergenic |
AACCCTAGATAATAAATTGT+AGG | 0.450219 | 4.2:+47908437 | None:intergenic |
TAAGCAACTTTGTGGACAAT+GGG | 0.450728 | 4.2:-47901081 | MS.gene89973:CDS |
CGTTAGCACCACCAGTTAAA+GGG | 0.452946 | 4.2:-47901213 | MS.gene89973:CDS |
TATAGTGCTTGTGCTGCTGC+TGG | 0.457280 | 4.2:-47901710 | MS.gene89973:CDS |
CTCTTTGTCCTCAAATCAAA+AGG | 0.462194 | 4.2:-47910088 | MS.gene89973:intron |
TGCTGTTGAGCTTGGAAGCA+GGG | 0.464847 | 4.2:+47910186 | None:intergenic |
ATGCTTTCACATTACTTGGA+TGG | 0.469398 | 4.2:-47908509 | MS.gene89973:CDS |
ATGTGTTGTCAAACCCAAAT+GGG | 0.472191 | 4.2:-47901853 | MS.gene89973:CDS |
GATTCCATTTCCGTAGGTTG+TGG | 0.472908 | 4.2:+47901472 | None:intergenic |
ACTATAGGAAATTCATCAAA+AGG | 0.479272 | 4.2:-47901572 | MS.gene89973:intron |
ACATTACTTGGATGGACGGC+TGG | 0.483240 | 4.2:-47908501 | MS.gene89973:CDS |
AAATAGTAATGGCTAGTGAC+CGG | 0.492894 | 4.2:+47900513 | None:intergenic |
CTTGAACACCAAGCTCAGTT+GGG | 0.499721 | 4.2:-47908414 | MS.gene89973:CDS |
GACGATTACCCAACTGAGCT+TGG | 0.510392 | 4.2:+47908406 | None:intergenic |
AACATCTTCCCTTTAACTGG+TGG | 0.510394 | 4.2:+47901205 | None:intergenic |
TTAAGCAACTTTGTGGACAA+TGG | 0.513699 | 4.2:-47901082 | MS.gene89973:CDS |
TCTTGAACACCAAGCTCAGT+TGG | 0.514538 | 4.2:-47908415 | MS.gene89973:CDS |
GTCAAATTATAGAAAACTAC+AGG | 0.520489 | 4.2:+47900401 | None:intergenic |
TGTCTCAATGAGTGAAAAGA+TGG | 0.520850 | 4.2:+47901767 | None:intergenic |
AGCATCATTGCCACAACCTA+CGG | 0.521383 | 4.2:-47901482 | MS.gene89973:CDS |
ATTCAGTTTGCAGTATGCTA+TGG | 0.525489 | 4.2:-47902053 | MS.gene89973:CDS |
TCTGGGGATTACATTGCGGT+TGG | 0.530776 | 4.2:+47900544 | None:intergenic |
TTAAGATTAGGCCTTCAGAT+TGG | 0.532038 | 4.2:+47901101 | None:intergenic |
AACATTGGTAGGTCCTAGAT+GGG | 0.538805 | 4.2:-47902096 | MS.gene89973:intron |
ACATTGCGGTTGGAGAACTC+AGG | 0.541283 | 4.2:+47900554 | None:intergenic |
TAACATTCAACCAGAAAATG+AGG | 0.544825 | 4.2:+47900357 | None:intergenic |
AATAGTAATGGCTAGTGACC+GGG | 0.554152 | 4.2:+47900514 | None:intergenic |
AGTTAAAGGGAAGATGTTCA+AGG | 0.559191 | 4.2:-47901200 | MS.gene89973:CDS |
TATGGAAGACTTAGAAGAGG+TGG | 0.561341 | 4.2:+47908531 | None:intergenic |
TTTAGGTGGTCAATGCATGA+AGG | 0.561736 | 4.2:-47902009 | MS.gene89973:intron |
TTTCACATTACTTGGATGGA+CGG | 0.561739 | 4.2:-47908505 | MS.gene89973:CDS |
GGTCATATAAATAAACCACT+TGG | 0.563227 | 4.2:+47901045 | None:intergenic |
AGGAATGATTCCATTTCCGT+AGG | 0.563585 | 4.2:+47901466 | None:intergenic |
TATAATGGTTGAAATAGTAA+TGG | 0.567620 | 4.2:+47900502 | None:intergenic |
CATTGCGGTTGGAGAACTCA+GGG | 0.570344 | 4.2:+47900555 | None:intergenic |
AGTGACCGGGAAATCAGTCT+GGG | 0.574703 | 4.2:+47900527 | None:intergenic |
GCATTTGGCAACCAATCTGA+AGG | 0.574929 | 4.2:-47901112 | MS.gene89973:CDS |
CCACTTGACAACATCAATTG+TGG | 0.577939 | 4.2:-47908556 | MS.gene89973:CDS |
ATAGTACAATTATCAGCGGT+TGG | 0.585010 | 4.2:-47901010 | MS.gene89973:CDS |
CACCATAGTACAATTATCAG+CGG | 0.588779 | 4.2:-47901014 | MS.gene89973:CDS |
GTCATATAAATAAACCACTT+GGG | 0.596770 | 4.2:+47901046 | None:intergenic |
GTTGAATGTTACCATTGCTG+TGG | 0.599226 | 4.2:-47900345 | MS.gene89973:CDS |
AGTATGCTATGGAGCTGTAG+TGG | 0.602304 | 4.2:-47902042 | MS.gene89973:CDS |
TGCAGAGAAAACCACAGCAA+TGG | 0.613825 | 4.2:+47900334 | None:intergenic |
ACAATTATCAGCGGTTGGTG+TGG | 0.615089 | 4.2:-47901005 | MS.gene89973:intron |
ACAGGTAAAACAAAGTCAAG+TGG | 0.639212 | 4.2:+47900419 | None:intergenic |
GTTAAAGGGAAGATGTTCAA+GGG | 0.641024 | 4.2:-47901199 | MS.gene89973:CDS |
GGAAACCATTAGTGCCCAAG+TGG | 0.651444 | 4.2:-47901060 | MS.gene89973:CDS |
GCATATGGAAGACTTAGAAG+AGG | 0.655103 | 4.2:+47908528 | None:intergenic |
CCACAATTGATGTTGTCAAG+TGG | 0.661940 | 4.2:+47908556 | None:intergenic |
TTAGGTTCATGGGTGCATTG+TGG | 0.662762 | 4.2:-47908582 | MS.gene89973:intron |
TTGTACTATGGTGAAAACGT+TGG | 0.666629 | 4.2:+47901024 | None:intergenic |
GTCTCAATGAGTGAAAAGAT+GGG | 0.681412 | 4.2:+47901768 | None:intergenic |
TCAACTACGATTTAGAGACA+TGG | 0.691481 | 4.2:-47908385 | MS.gene89973:CDS |
AGTGTTAGAGCAAACATTTG+GGG | 0.702189 | 4.2:-47900588 | MS.gene89973:CDS |
GTGACCGGGAAATCAGTCTG+GGG | 0.738445 | 4.2:+47900528 | None:intergenic |
TCAGTCTGGGGATTACATTG+CGG | 0.741413 | 4.2:+47900540 | None:intergenic |
ACATTGGTAGGTCCTAGATG+GGG | 0.757774 | 4.2:-47902095 | MS.gene89973:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 47900253 | 47910215 | 47900253 | ID=MS.gene89973 |
chr4.2 | mRNA | 47900253 | 47910215 | 47900253 | ID=MS.gene89973.t1;Parent=MS.gene89973 |
chr4.2 | exon | 47910089 | 47910215 | 47910089 | ID=MS.gene89973.t1.exon1;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47910089 | 47910215 | 47910089 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47908370 | 47908600 | 47908370 | ID=MS.gene89973.t1.exon2;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47908370 | 47908600 | 47908370 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47902010 | 47902107 | 47902010 | ID=MS.gene89973.t1.exon3;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47902010 | 47902107 | 47902010 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47901696 | 47901882 | 47901696 | ID=MS.gene89973.t1.exon4;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47901696 | 47901882 | 47901696 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47901457 | 47901587 | 47901457 | ID=MS.gene89973.t1.exon5;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47901457 | 47901587 | 47901457 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47901006 | 47901239 | 47901006 | ID=MS.gene89973.t1.exon6;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47901006 | 47901239 | 47901006 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
chr4.2 | exon | 47900253 | 47900633 | 47900253 | ID=MS.gene89973.t1.exon7;Parent=MS.gene89973.t1 |
chr4.2 | CDS | 47900253 | 47900633 | 47900253 | ID=cds.MS.gene89973.t1;Parent=MS.gene89973.t1 |
Gene Sequence |
Protein sequence |