Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90803.t1 | XP_003592786.2 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 2.30E-247 | 864.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90803.t1 | Q9SR06 | 70.0 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 3.2e-181 | 636.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90803.t1 | G7IF21 | 97.9 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 1.7e-247 | 864.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90803 | MS.gene042025 | PPI |
| MS.gene90803 | MS.gene42910 | PPI |
| MS.gene90803 | MS.gene81197 | PPI |
| MS.gene90803 | MS.gene73008 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90803.t1 | MTR_1g116060 | 97.945 | 438 | 9 | 0 | 1 | 438 | 1 | 438 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90803.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene90803.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene90803.t1 | AT3G04680 | 69.977 | 443 | 128 | 3 | 1 | 438 | 1 | 443 | 0.0 | 649 |
| MS.gene90803.t1 | AT5G39930 | 53.444 | 421 | 191 | 3 | 17 | 435 | 4 | 421 | 3.97e-157 | 451 |
| MS.gene90803.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.18e-12 | 68.9 |
| MS.gene90803.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene90803.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
| MS.gene90803.t1 | AT5G11010 | 29.851 | 134 | 90 | 4 | 130 | 259 | 33 | 166 | 1.51e-12 | 69.3 |
Find 130 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGCAAGTATTTAATTA+TGG | 0.144919 | 1.4:-88071648 | MS.gene90803:CDS |
| CTTCGTCTTCGACTCCTTAA+TGG | 0.169227 | 1.4:-88075035 | MS.gene90803:CDS |
| TACCCTTATCCTATTACTTC+TGG | 0.205288 | 1.4:+88073279 | None:intergenic |
| GACAATTAAGCAAGTGAAAT+TGG | 0.240765 | 1.4:-88075099 | MS.gene90803:CDS |
| GTTGTTGGACCTTCAGATTC+TGG | 0.241641 | 1.4:-88074262 | MS.gene90803:CDS |
| TCCTATTACTTCTGGACTTC+TGG | 0.246775 | 1.4:+88073287 | None:intergenic |
| GGAAAATTGAGCCAGATTTC+AGG | 0.267757 | 1.4:+88074981 | None:intergenic |
| ACCTTTGTTGACTTGGATAT+TGG | 0.269551 | 1.4:-88074181 | MS.gene90803:CDS |
| GGTGCAGGTCCCGCTGTTAC+TGG | 0.269582 | 1.4:-88075137 | MS.gene90803:CDS |
| AAATCTCAGCGTTTCCATTA+AGG | 0.272061 | 1.4:+88075021 | None:intergenic |
| CCACGCTCTGCCTTGCCAAT+TGG | 0.286604 | 1.4:-88072490 | MS.gene90803:CDS |
| CCAAGCAAGTATTTAATTAT+GGG | 0.286724 | 1.4:-88071647 | MS.gene90803:CDS |
| ATTCAAGGCTGATGTTGTTT+TGG | 0.292392 | 1.4:-88073582 | MS.gene90803:CDS |
| TCCGCGGTATAACCAGTTTC+AGG | 0.300467 | 1.4:+88074810 | None:intergenic |
| CAAGGAGCTCGCGGGGATAC+TGG | 0.343687 | 1.4:-88073860 | MS.gene90803:CDS |
| GTCAAGGATGCTTCTTAGTT+GGG | 0.351155 | 1.4:-88074227 | MS.gene90803:CDS |
| TTATGGTGCAGCAATGTTGC+CGG | 0.356449 | 1.4:-88071829 | MS.gene90803:intron |
| GGCCCTAGGGTGATTGTTGT+TGG | 0.362138 | 1.4:-88074277 | MS.gene90803:CDS |
| GGATCGATGGGCATTTCAAT+TGG | 0.380336 | 1.4:+88074118 | None:intergenic |
| TGTCAAGGATGCTTCTTAGT+TGG | 0.381883 | 1.4:-88074228 | MS.gene90803:CDS |
| CCGAGCTTCCACCTGAAATC+TGG | 0.383905 | 1.4:-88074992 | MS.gene90803:CDS |
| AGTTACGGCGAACTTGAGTC+TGG | 0.395870 | 1.4:+88074956 | None:intergenic |
| AATTTCACTTGCTTAATTGT+CGG | 0.397547 | 1.4:+88075101 | None:intergenic |
| TTTGCTCAGAGACGTGCTTA+AGG | 0.408263 | 1.4:-88073380 | MS.gene90803:CDS |
| AGTCCAGAAGTAATAGGATA+AGG | 0.412890 | 1.4:-88073282 | MS.gene90803:CDS |
| CAAGGGTCTATAACAATTCC+TGG | 0.414153 | 1.4:-88074157 | MS.gene90803:CDS |
| TCAAGTTTCAAGCCATGTTA+AGG | 0.417129 | 1.4:+88071622 | None:intergenic |
| TACCTTGAAATGATCTCATC+AGG | 0.434012 | 1.4:+88072373 | None:intergenic |
| TTGCTCAGAGACGTGCTTAA+GGG | 0.434050 | 1.4:-88073379 | MS.gene90803:CDS |
| ATTTGATTGGTCAGGGCCCT+AGG | 0.434217 | 1.4:-88074291 | MS.gene90803:intron |
| TAACACCATTCCAGCAGCTC+TGG | 0.437054 | 1.4:+88073810 | None:intergenic |
| GCCAGAAGTCCAGAAGTAAT+AGG | 0.441249 | 1.4:-88073288 | MS.gene90803:CDS |
| TTTGTTTATCGAGTTGGTGG+TGG | 0.447219 | 1.4:-88072523 | MS.gene90803:CDS |
| GTCCAGAAGTAATAGGATAA+GGG | 0.451342 | 1.4:-88073281 | MS.gene90803:intron |
| CCCATAATTAAATACTTGCT+TGG | 0.452098 | 1.4:+88071647 | None:intergenic |
| GACTTATTTGTTTATCGAGT+TGG | 0.455222 | 1.4:-88072529 | MS.gene90803:CDS |
| AATGATCTCATCAGGTTCCT+TGG | 0.459020 | 1.4:+88072381 | None:intergenic |
| AGTTTCACAACATCTACTTT+AGG | 0.461880 | 1.4:+88073352 | None:intergenic |
| GCATGCAATCCGTACATTCA+AGG | 0.462451 | 1.4:-88073597 | MS.gene90803:CDS |
| GACTTCTGGCGGAACTTCAC+AGG | 0.465905 | 1.4:+88073301 | None:intergenic |
| GCAGCAGGTTCTGCTCCAAT+TGG | 0.466934 | 1.4:+88072475 | None:intergenic |
| AATGCCGAGTCCAGAGCTGC+TGG | 0.468900 | 1.4:-88073820 | MS.gene90803:CDS |
| CAACATCAGCCTTGAATGTA+CGG | 0.471086 | 1.4:+88073588 | None:intergenic |
| GTATGGTGCTACCATTGAAA+TGG | 0.476019 | 1.4:-88074841 | MS.gene90803:CDS |
| AATACCATGGGATGGATAGA+AGG | 0.476207 | 1.4:-88073787 | MS.gene90803:CDS |
| GAAGCCCACCTTTGTTGACT+TGG | 0.477215 | 1.4:-88074188 | MS.gene90803:CDS |
| ATGGATGGTACTCCTGAAAC+TGG | 0.480202 | 1.4:-88074822 | MS.gene90803:CDS |
| AGGAGTACCATCCATTTCAA+TGG | 0.480948 | 1.4:+88074830 | None:intergenic |
| GTTGACTTGGATATTGGCCA+AGG | 0.482675 | 1.4:-88074175 | MS.gene90803:CDS |
| GGTCGGGTGGAGTTGTATCT+AGG | 0.483284 | 1.4:-88073324 | MS.gene90803:CDS |
| CAGGAATTGTTATAGACCCT+TGG | 0.485244 | 1.4:+88074158 | None:intergenic |
| AGATGACTCTGTATTATCTC+AGG | 0.490721 | 1.4:-88074606 | MS.gene90803:intron |
| GAGGAGAAAGATCATTTGTA+AGG | 0.495205 | 1.4:+88072575 | None:intergenic |
| ACATACCTTACACCATCTGC+TGG | 0.496857 | 1.4:-88071677 | MS.gene90803:CDS |
| TTAATGGCGTATGGCGGTGC+AGG | 0.497042 | 1.4:-88075152 | MS.gene90803:CDS |
| ATACTGGAGAGACAATTTGC+TGG | 0.500426 | 1.4:-88073844 | MS.gene90803:CDS |
| CTTGGAAGTTCTCCAGCAGA+TGG | 0.504121 | 1.4:+88071665 | None:intergenic |
| AATTGAAATGCCCATCGATC+CGG | 0.504848 | 1.4:-88074116 | MS.gene90803:CDS |
| GTTCTCCAGCAGATGGTGTA+AGG | 0.505096 | 1.4:+88071672 | None:intergenic |
| TAACAGACATTGACATTCAG+AGG | 0.512887 | 1.4:-88071795 | MS.gene90803:intron |
| GTTGGGCAGCAAAACAAGGT+TGG | 0.516790 | 1.4:-88074210 | MS.gene90803:CDS |
| AAGGCAGAGCGTGGAGCTTG+TGG | 0.519634 | 1.4:+88072499 | None:intergenic |
| CCCTAGTCTTTAATGGCGTA+TGG | 0.520280 | 1.4:-88075161 | None:intergenic |
| AATTCCCTCCACCGGATCGA+TGG | 0.521049 | 1.4:+88074105 | None:intergenic |
| CTTAGTTGGGCAGCAAAACA+AGG | 0.522514 | 1.4:-88074214 | MS.gene90803:CDS |
| GTTGTGAAACTTCAGAGGTC+GGG | 0.523003 | 1.4:-88073340 | MS.gene90803:CDS |
| TTGTTTATCGAGTTGGTGGT+GGG | 0.535155 | 1.4:-88072522 | MS.gene90803:CDS |
| AAATTTGAAATATTAGAATG+AGG | 0.541936 | 1.4:+88072556 | None:intergenic |
| AACTGGTTATACCGCGGATG+AGG | 0.542046 | 1.4:-88074805 | MS.gene90803:intron |
| TCAAGAGGAATTCCCTCCAC+CGG | 0.542450 | 1.4:+88074097 | None:intergenic |
| TTATTTGTTTATCGAGTTGG+TGG | 0.548071 | 1.4:-88072526 | MS.gene90803:CDS |
| ACATTTACATAACTAACCAT+TGG | 0.551977 | 1.4:+88074677 | None:intergenic |
| ATTCCCTCCACCGGATCGAT+GGG | 0.554654 | 1.4:+88074106 | None:intergenic |
| GTCTGTTACATAGATAAAGC+CGG | 0.555833 | 1.4:+88071810 | None:intergenic |
| TTGACTTGGATATTGGCCAA+GGG | 0.556103 | 1.4:-88074174 | MS.gene90803:CDS |
| CCAATTGGCAAGGCAGAGCG+TGG | 0.557049 | 1.4:+88072490 | None:intergenic |
| GTGCTTGTCAAGGAGCTCGC+GGG | 0.558666 | 1.4:-88073868 | MS.gene90803:CDS |
| ACTCTCGTTGGATCTGCAGC+AGG | 0.559383 | 1.4:+88072460 | None:intergenic |
| CGAGTCCAGAGCTGCTGGAA+TGG | 0.560247 | 1.4:-88073815 | MS.gene90803:CDS |
| AATGCCCATCGATCCGGTGG+AGG | 0.563074 | 1.4:-88074110 | MS.gene90803:CDS |
| CCTTGCTGTCTCATTTGCCA+AGG | 0.564042 | 1.4:-88072398 | MS.gene90803:CDS |
| TTCACAGCTACAACTCTCGT+TGG | 0.566936 | 1.4:+88072448 | None:intergenic |
| CACTCCTTCTATCCATCCCA+TGG | 0.569058 | 1.4:+88073783 | None:intergenic |
| GGAGTGGCAGCAATGCATCC+AGG | 0.569729 | 1.4:+88074139 | None:intergenic |
| TTTGATTGGTCAGGGCCCTA+GGG | 0.570927 | 1.4:-88074290 | MS.gene90803:intron |
| CCAGATTTCAGGTGGAAGCT+CGG | 0.573098 | 1.4:+88074992 | None:intergenic |
| TGTCCATAAAAGTAAACAAG+AGG | 0.573566 | 1.4:+88074070 | None:intergenic |
| TGTTGTGAAACTTCAGAGGT+CGG | 0.573910 | 1.4:-88073341 | MS.gene90803:CDS |
| AACCTGATGAGATCATTTCA+AGG | 0.575187 | 1.4:-88072375 | MS.gene90803:intron |
| TAATTATGGGAACCTTAACA+TGG | 0.575215 | 1.4:-88071634 | MS.gene90803:CDS |
| TCGAAGACGAAGAGGTGAGT+CGG | 0.575469 | 1.4:+88075046 | None:intergenic |
| GGTCCAACAACAATCACCCT+AGG | 0.575548 | 1.4:+88074274 | None:intergenic |
| ATGCCCATCGATCCGGTGGA+GGG | 0.575608 | 1.4:-88074109 | MS.gene90803:CDS |
| GCCAATATCCAAGTCAACAA+AGG | 0.588558 | 1.4:+88074180 | None:intergenic |
| TGGTGTTAAATACCATGGGA+TGG | 0.592447 | 1.4:-88073795 | MS.gene90803:CDS |
| AATATCCAAGTCAACAAAGG+TGG | 0.592672 | 1.4:+88074183 | None:intergenic |
| TGAAATGCCCATCGATCCGG+TGG | 0.592811 | 1.4:-88074113 | MS.gene90803:CDS |
| GAATTTGAACCAGTAACAGC+GGG | 0.608811 | 1.4:+88075128 | None:intergenic |
| CTGGAAAGACTACCTTGTCA+AGG | 0.612870 | 1.4:-88074243 | MS.gene90803:CDS |
| ATATCCAAGTCAACAAAGGT+GGG | 0.613831 | 1.4:+88074184 | None:intergenic |
| GTAGTCTTTCCAGAATCTGA+AGG | 0.614463 | 1.4:+88074253 | None:intergenic |
| AAATTGAGCCAGATTTCAGG+TGG | 0.615483 | 1.4:+88074984 | None:intergenic |
| ATTGTATAAAGTGCTTGTCA+AGG | 0.615803 | 1.4:-88073878 | MS.gene90803:CDS |
| GATAATACAGAGTCATCTGA+AGG | 0.618694 | 1.4:+88074611 | None:intergenic |
| GATGGGCATTTCAATTGGAG+TGG | 0.619367 | 1.4:+88074123 | None:intergenic |
| TAAACAAGAGGCATTTCAAG+AGG | 0.619620 | 1.4:+88074082 | None:intergenic |
| CATTCCAGCAGCTCTGGACT+CGG | 0.622880 | 1.4:+88073816 | None:intergenic |
| AGGTTCTGCTCCAATTGGCA+AGG | 0.623138 | 1.4:+88072480 | None:intergenic |
| GTTACGGCGAACTTGAGTCT+GGG | 0.624730 | 1.4:+88074957 | None:intergenic |
| TGCTTGTCAAGGAGCTCGCG+GGG | 0.630947 | 1.4:-88073867 | MS.gene90803:CDS |
| TATTACTTCTGGACTTCTGG+CGG | 0.638427 | 1.4:+88073290 | None:intergenic |
| GTGAAACTTCAGAGGTCGGG+TGG | 0.639286 | 1.4:-88073337 | MS.gene90803:CDS |
| CCTTGGCAAATGAGACAGCA+AGG | 0.641711 | 1.4:+88072398 | None:intergenic |
| ACTAAGAAGCATCCTTGACA+AGG | 0.644015 | 1.4:+88074231 | None:intergenic |
| TGGAATGGTGTTAAATACCA+TGG | 0.644511 | 1.4:-88073800 | MS.gene90803:CDS |
| CATGGGATGGATAGAAGGAG+TGG | 0.650431 | 1.4:-88073782 | MS.gene90803:CDS |
| TAGATGTTGTGAAACTTCAG+AGG | 0.652011 | 1.4:-88073345 | MS.gene90803:CDS |
| ATGAGACAGCAAGGACTGCG+TGG | 0.652105 | 1.4:+88072407 | None:intergenic |
| GGAATGGTGTTAAATACCAT+GGG | 0.654726 | 1.4:-88073799 | MS.gene90803:CDS |
| TTAAGGAGTCGAAGACGAAG+AGG | 0.656307 | 1.4:+88075038 | None:intergenic |
| GTCCAACAACAATCACCCTA+GGG | 0.657175 | 1.4:+88074275 | None:intergenic |
| GGTGCTACCATTGAAATGGA+TGG | 0.657214 | 1.4:-88074837 | MS.gene90803:CDS |
| AGTGCTTGTCAAGGAGCTCG+CGG | 0.657958 | 1.4:-88073869 | MS.gene90803:CDS |
| ATGGGATGGATAGAAGGAGT+GGG | 0.661981 | 1.4:-88073781 | MS.gene90803:CDS |
| TCCTGAAACTGGTTATACCG+CGG | 0.672527 | 1.4:-88074811 | MS.gene90803:CDS |
| CGAATTTGAACCAGTAACAG+CGG | 0.691935 | 1.4:+88075127 | None:intergenic |
| TAGTCTTTAATGGCGTATGG+CGG | 0.711686 | 1.4:-88075158 | None:intergenic |
| ACGGCGAACTTGAGTCTGGG+AGG | 0.717660 | 1.4:+88074960 | None:intergenic |
| TTTATGGACACACATCTCCG+AGG | 0.722635 | 1.4:-88074057 | MS.gene90803:intron |
| AAAGTGATTTACCTCATCCG+CGG | 0.723753 | 1.4:+88074794 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAA+GGG | - | chr1.4:88072345-88072364 | MS.gene90803:intron | 0.0% |
| !! | ACATAAAAATAATATAACTA+AGG | - | chr1.4:88074774-88074793 | MS.gene90803:intron | 10.0% |
| !!! | ATTTTTAAATGTTAGTTAAA+TGG | - | chr1.4:88073596-88073615 | MS.gene90803:CDS | 10.0% |
| !!! | TATTATAATTTTTGTAAACT+TGG | - | chr1.4:88073324-88073343 | MS.gene90803:CDS | 10.0% |
| !!! | TTTTTAAATGTTAGTTAAAT+GGG | - | chr1.4:88073597-88073616 | MS.gene90803:CDS | 10.0% |
| !! | AAATAGATAGAATTAAGTAT+TGG | - | chr1.4:88073838-88073857 | MS.gene90803:CDS | 15.0% |
| !! | TACTGAAAAAAAGAATTATT+TGG | + | chr1.4:88072863-88072882 | None:intergenic | 15.0% |
| !! | TTAATAGTTGAAAATATGAT+AGG | + | chr1.4:88072757-88072776 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATATTAGAATG+AGG | + | chr1.4:88074218-88074237 | None:intergenic | 15.0% |
| !!! | TCATATTTTCAACTATTAAT+TGG | - | chr1.4:88072758-88072777 | MS.gene90803:intron | 15.0% |
| !!! | TTTTTTGTTTGTTTTGTTTA+TGG | - | chr1.4:88072266-88072285 | MS.gene90803:intron | 15.0% |
| !! | AAAACATAAAATTTGAGTGA+AGG | - | chr1.4:88073888-88073907 | MS.gene90803:CDS | 20.0% |
| !! | AAAATAAATGAATCTTCCTT+TGG | - | chr1.4:88073288-88073307 | MS.gene90803:CDS | 20.0% |
| !! | AAACATAAAATTTGAGTGAA+GGG | - | chr1.4:88073889-88073908 | MS.gene90803:CDS | 20.0% |
| !! | AAAGTTCAAAATAACCAAAA+TGG | + | chr1.4:88074612-88074631 | None:intergenic | 20.0% |
| !! | AAATAAATGAATCTTCCTTT+GGG | - | chr1.4:88073289-88073308 | MS.gene90803:CDS | 20.0% |
| !! | ACATAATTTATTTGTGTGTT+AGG | - | chr1.4:88071897-88071916 | MS.gene90803:intron | 20.0% |
| !! | ATTGAAAATTGGTATAAAAG+AGG | + | chr1.4:88071858-88071877 | None:intergenic | 20.0% |
| !! | CAAAAGCAACAAATAATATA+GGG | + | chr1.4:88074513-88074532 | None:intergenic | 20.0% |
| !! | TAAGTATCAAATGATTTGAT+TGG | - | chr1.4:88072467-88072486 | MS.gene90803:CDS | 20.0% |
| !! | TCAAAAGCAACAAATAATAT+AGG | + | chr1.4:88074514-88074533 | None:intergenic | 20.0% |
| !! | TTCAATTCAACAATAATGTA+AGG | + | chr1.4:88073039-88073058 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGGTATTAGTTA+TGG | + | chr1.4:88073263-88073282 | None:intergenic | 20.0% |
| !!! | AAAATCAAGGTATTAGTTAT+GGG | + | chr1.4:88073262-88073281 | None:intergenic | 20.0% |
| !!! | AGATTTTGTTATGTTGTTTA+TGG | - | chr1.4:88075010-88075029 | MS.gene90803:CDS | 20.0% |
| !!! | ATAGTTCTTTTGAAAATAGT+AGG | - | chr1.4:88073914-88073933 | MS.gene90803:intron | 20.0% |
| !!! | TCTTATTTTTTTCGTTTTAG+AGG | - | chr1.4:88073567-88073586 | MS.gene90803:intron | 20.0% |
| !!! | TTATTTTGAGTGAAAAATCA+AGG | + | chr1.4:88073275-88073294 | None:intergenic | 20.0% |
| ! | AAAATTGGTATAAAAGAGGA+TGG | + | chr1.4:88071854-88071873 | None:intergenic | 25.0% |
| ! | AACAATAATGTAAGGTTCAA+AGG | + | chr1.4:88073031-88073050 | None:intergenic | 25.0% |
| ! | AAGATACAATGTAGGAAATT+GGG | + | chr1.4:88074907-88074926 | None:intergenic | 25.0% |
| ! | AATTTCACTTGCTTAATTGT+CGG | + | chr1.4:88071673-88071692 | None:intergenic | 25.0% |
| ! | ACATTTACATAACTAACCAT+TGG | + | chr1.4:88072097-88072116 | None:intergenic | 25.0% |
| ! | AGAAATAAAAGTGACAGAAA+TGG | - | chr1.4:88074554-88074573 | MS.gene90803:intron | 25.0% |
| ! | ATATTGAAAAGTGGAAAAGT+AGG | + | chr1.4:88073520-88073539 | None:intergenic | 25.0% |
| ! | ATGCAGAAAATATTGAAAAG+TGG | + | chr1.4:88073529-88073548 | None:intergenic | 25.0% |
| ! | ATTTCAAGGTAACTATGATT+TGG | - | chr1.4:88074410-88074429 | MS.gene90803:intron | 25.0% |
| ! | CCAAGCAAGTATTTAATTAT+GGG | - | chr1.4:88075124-88075143 | MS.gene90803:CDS | 25.0% |
| ! | CTAGCAGAAAAATTGAAAAT+TGG | + | chr1.4:88071869-88071888 | None:intergenic | 25.0% |
| ! | TAACATTTGATATGTTGAAG+TGG | + | chr1.4:88073755-88073774 | None:intergenic | 25.0% |
| ! | TAAGATACAATGTAGGAAAT+TGG | + | chr1.4:88074908-88074927 | None:intergenic | 25.0% |
| ! | TATTGAAAAGTGGAAAAGTA+GGG | + | chr1.4:88073519-88073538 | None:intergenic | 25.0% |
| ! | TCCAAGCAAGTATTTAATTA+TGG | - | chr1.4:88075123-88075142 | MS.gene90803:CDS | 25.0% |
| ! | TGATTACTACATCTTGATTA+TGG | - | chr1.4:88073091-88073110 | MS.gene90803:intron | 25.0% |
| !! | AAATCAAGGTATTAGTTATG+GGG | + | chr1.4:88073261-88073280 | None:intergenic | 25.0% |
| !! | AAGACTTAGTTTAACCATTT+TGG | - | chr1.4:88074595-88074614 | MS.gene90803:intron | 25.0% |
| !! | AATTACAGCTTTAATTACCT+CGG | + | chr1.4:88072734-88072753 | None:intergenic | 25.0% |
| !! | GATTGTATTTTCATTTCCTT+GGG | + | chr1.4:88072839-88072858 | None:intergenic | 25.0% |
| !! | TGATTGTATTTTCATTTCCT+TGG | + | chr1.4:88072840-88072859 | None:intergenic | 25.0% |
| !! | TTAATGTGTCACATCTTTTA+TGG | - | chr1.4:88074925-88074944 | MS.gene90803:intron | 25.0% |
| !! | TTTTAAATTTCAGACACCAA+TGG | - | chr1.4:88072078-88072097 | MS.gene90803:intron | 25.0% |
| !! | TTTTACAATAGAACCTCAAT+GGG | + | chr1.4:88073662-88073681 | None:intergenic | 25.0% |
| !! | TTTTTACAATAGAACCTCAA+TGG | + | chr1.4:88073663-88073682 | None:intergenic | 25.0% |
| !!! | TTTTGTTATGTTGTTTATGG+AGG | - | chr1.4:88075013-88075032 | MS.gene90803:CDS | 25.0% |
| AAAATACCAAAACTGTGTTG+TGG | - | chr1.4:88074737-88074756 | MS.gene90803:intron | 30.0% | |
| AAATATCCAGAAGCAATCTT+TGG | + | chr1.4:88074018-88074037 | None:intergenic | 30.0% | |
| AAATTTCGTTCTTCCAAACA+CGG | + | chr1.4:88072401-88072420 | None:intergenic | 30.0% | |
| AATATCCAGAAGCAATCTTT+GGG | + | chr1.4:88074017-88074036 | None:intergenic | 30.0% | |
| ACTTACATAGCATTTGCAAA+AGG | - | chr1.4:88073686-88073705 | MS.gene90803:intron | 30.0% | |
| AGATACAATGTAGGAAATTG+GGG | + | chr1.4:88074906-88074925 | None:intergenic | 30.0% | |
| AGTGTGATGCATAATAGATA+AGG | + | chr1.4:88073237-88073256 | None:intergenic | 30.0% | |
| AGTTTCACAACATCTACTTT+AGG | + | chr1.4:88073422-88073441 | None:intergenic | 30.0% | |
| ATAACTAAGGAAAATGCTAC+TGG | - | chr1.4:88074787-88074806 | MS.gene90803:intron | 30.0% | |
| ATATGTTGAAGTGGAATCAT+GGG | + | chr1.4:88073746-88073765 | None:intergenic | 30.0% | |
| CAAGAAAAAAACTAACCCAA+AGG | + | chr1.4:88074057-88074076 | None:intergenic | 30.0% | |
| CCCATAATTAAATACTTGCT+TGG | + | chr1.4:88075127-88075146 | None:intergenic | 30.0% | |
| CTTGAACGAGTATTAAGATT+TGG | + | chr1.4:88074453-88074472 | None:intergenic | 30.0% | |
| CTTGTAAGCACATATTTGTT+TGG | - | chr1.4:88073975-88073994 | MS.gene90803:intron | 30.0% | |
| GACAATTAAGCAAGTGAAAT+TGG | - | chr1.4:88071672-88071691 | MS.gene90803:CDS | 30.0% | |
| GACACATTAAGATACAATGT+AGG | + | chr1.4:88074915-88074934 | None:intergenic | 30.0% | |
| GACTTATTTGTTTATCGAGT+TGG | - | chr1.4:88074242-88074261 | MS.gene90803:CDS | 30.0% | |
| GAGTTACAAAATAGTTGAAC+AGG | + | chr1.4:88074128-88074147 | None:intergenic | 30.0% | |
| GTTATAGATTTGACGTGTAA+TGG | - | chr1.4:88074701-88074720 | MS.gene90803:intron | 30.0% | |
| TAATTATGGGAACCTTAACA+TGG | - | chr1.4:88075137-88075156 | MS.gene90803:CDS | 30.0% | |
| TGTCCATAAAAGTAAACAAG+AGG | + | chr1.4:88072704-88072723 | None:intergenic | 30.0% | |
| TTACTACATCTTGATTATGG+TGG | - | chr1.4:88073094-88073113 | MS.gene90803:intron | 30.0% | |
| TTATTATAGATTGCCGTGTT+TGG | - | chr1.4:88072385-88072404 | MS.gene90803:CDS | 30.0% | |
| TTTCCTATAAGGAGTTCAAA+CGG | + | chr1.4:88073361-88073380 | None:intergenic | 30.0% | |
| ! | AAAATTCCACAACACAGTTT+TGG | + | chr1.4:88074746-88074765 | None:intergenic | 30.0% |
| ! | ATCAAATGATTTGATTGGTC+AGG | - | chr1.4:88072472-88072491 | MS.gene90803:CDS | 30.0% |
| ! | ATTGTATAAAGTGCTTGTCA+AGG | - | chr1.4:88072893-88072912 | MS.gene90803:intron | 30.0% |
| ! | ATTTTTGTAAACTTGGTCTC+AGG | - | chr1.4:88073331-88073350 | MS.gene90803:CDS | 30.0% |
| ! | GATATTTTGCTTAGTAGCTT+TGG | - | chr1.4:88074031-88074050 | MS.gene90803:intron | 30.0% |
| ! | TCAAATGATTTGATTGGTCA+GGG | - | chr1.4:88072473-88072492 | MS.gene90803:CDS | 30.0% |
| ! | TGTTAGGTTTTTACTTGGTA+TGG | - | chr1.4:88071913-88071932 | MS.gene90803:intron | 30.0% |
| ! | TTGATGCAGGAATACTTTTA+TGG | - | chr1.4:88074173-88074192 | MS.gene90803:CDS | 30.0% |
| ! | TTGTGTGTTAGGTTTTTACT+TGG | - | chr1.4:88071908-88071927 | MS.gene90803:intron | 30.0% |
| ! | TTTTATTGTGTCTCGTGATT+AGG | - | chr1.4:88072196-88072215 | MS.gene90803:intron | 30.0% |
| !! | ATGCCTCTTGTTTACTTTTA+TGG | - | chr1.4:88072698-88072717 | MS.gene90803:intron | 30.0% |
| !! | GATTTTCTTTTGAAGGACAA+AGG | + | chr1.4:88074638-88074657 | None:intergenic | 30.0% |
| !! | TTATTTGTTTATCGAGTTGG+TGG | - | chr1.4:88074245-88074264 | MS.gene90803:CDS | 30.0% |
| !!! | AATGTGCATGCTATTTTAGA+AGG | - | chr1.4:88072112-88072131 | MS.gene90803:intron | 30.0% |
| AAAGCCACCTAAATAAGGTT+AGG | + | chr1.4:88074823-88074842 | None:intergenic | 35.0% | |
| AAATCTCAGCGTTTCCATTA+AGG | + | chr1.4:88071753-88071772 | None:intergenic | 35.0% | |
| AACCTGATGAGATCATTTCA+AGG | - | chr1.4:88074396-88074415 | MS.gene90803:intron | 35.0% | |
| AAGCCACCTAAATAAGGTTA+GGG | + | chr1.4:88074822-88074841 | None:intergenic | 35.0% | |
| AATATCCAAGTCAACAAAGG+TGG | + | chr1.4:88072591-88072610 | None:intergenic | 35.0% | |
| AATCATTAACAGCAAACCCA+AGG | - | chr1.4:88072820-88072839 | MS.gene90803:intron | 35.0% | |
| ACCAAAAGAACAAGTAAGAG+AGG | + | chr1.4:88073131-88073150 | None:intergenic | 35.0% | |
| AGATGACTCTGTATTATCTC+AGG | - | chr1.4:88072165-88072184 | MS.gene90803:intron | 35.0% | |
| AGTCCAGAAGTAATAGGATA+AGG | - | chr1.4:88073489-88073508 | MS.gene90803:intron | 35.0% | |
| ATAGCATCACATCTCACAAA+CGG | + | chr1.4:88074675-88074694 | None:intergenic | 35.0% | |
| ATATCCAAGTCAACAAAGGT+GGG | + | chr1.4:88072590-88072609 | None:intergenic | 35.0% | |
| ATTAACTGCAATTAGCAGCT+TGG | + | chr1.4:88073793-88073812 | None:intergenic | 35.0% | |
| CAAAAGAACAAGTAAGAGAG+GGG | + | chr1.4:88073129-88073148 | None:intergenic | 35.0% | |
| CCAAAAGAACAAGTAAGAGA+GGG | + | chr1.4:88073130-88073149 | None:intergenic | 35.0% | |
| GAGGAGAAAGATCATTTGTA+AGG | + | chr1.4:88074199-88074218 | None:intergenic | 35.0% | |
| GATAATACAGAGTCATCTGA+AGG | + | chr1.4:88072163-88072182 | None:intergenic | 35.0% | |
| GATATGTTGAAGTGGAATCA+TGG | + | chr1.4:88073747-88073766 | None:intergenic | 35.0% | |
| GGAAGAACGAAATTTGTGAT+TGG | - | chr1.4:88072406-88072425 | MS.gene90803:CDS | 35.0% | |
| GTCCAGAAGTAATAGGATAA+GGG | - | chr1.4:88073490-88073509 | MS.gene90803:intron | 35.0% | |
| GTCTGTTACATAGATAAAGC+CGG | + | chr1.4:88074964-88074983 | None:intergenic | 35.0% | |
| TAAATGAATCTTCCTTTGGG+AGG | - | chr1.4:88073292-88073311 | MS.gene90803:CDS | 35.0% | |
| TAACAGACATTGACATTCAG+AGG | - | chr1.4:88074976-88074995 | MS.gene90803:CDS | 35.0% | |
| TACAAAATAGTTGAACAGGC+AGG | + | chr1.4:88074124-88074143 | None:intergenic | 35.0% | |
| TACCCTTATCCTATTACTTC+TGG | + | chr1.4:88073495-88073514 | None:intergenic | 35.0% | |
| TACCTTGAAATGATCTCATC+AGG | + | chr1.4:88074401-88074420 | None:intergenic | 35.0% | |
| TAGATGTTGTGAAACTTCAG+AGG | - | chr1.4:88073426-88073445 | MS.gene90803:intron | 35.0% | |
| TAGGGATCAAACACTATCAT+CGG | + | chr1.4:88074495-88074514 | None:intergenic | 35.0% | |
| TCAACAAAGCCACCTAAATA+AGG | + | chr1.4:88074828-88074847 | None:intergenic | 35.0% | |
| TCAAGTTTCAAGCCATGTTA+AGG | + | chr1.4:88075152-88075171 | None:intergenic | 35.0% | |
| TGAGATGTGATGCTATATCA+AGG | - | chr1.4:88074679-88074698 | MS.gene90803:CDS | 35.0% | |
| TGGTATAAAAGAGGATGGAA+GGG | + | chr1.4:88071849-88071868 | None:intergenic | 35.0% | |
| TTGGTATAAAAGAGGATGGA+AGG | + | chr1.4:88071850-88071869 | None:intergenic | 35.0% | |
| TTTCCGTTTGAACTCCTTAT+AGG | - | chr1.4:88073355-88073374 | MS.gene90803:CDS | 35.0% | |
| ! | AACGAAATTTGTGATTGGTC+AGG | - | chr1.4:88072411-88072430 | MS.gene90803:CDS | 35.0% |
| ! | AATGGAAACGCTGAGATTTT+TGG | - | chr1.4:88071754-88071773 | MS.gene90803:intron | 35.0% |
| ! | ACTGCACAGTTTTTCCTATA+AGG | + | chr1.4:88073372-88073391 | None:intergenic | 35.0% |
| ! | GGAATGGTGTTAAATACCAT+GGG | - | chr1.4:88072972-88072991 | MS.gene90803:intron | 35.0% |
| ! | TGCACAGGATTTTCTTTTGA+AGG | + | chr1.4:88074645-88074664 | None:intergenic | 35.0% |
| ! | TGGAATGGTGTTAAATACCA+TGG | - | chr1.4:88072971-88072990 | MS.gene90803:intron | 35.0% |
| !! | AACAGTGCTGATAAATGCAA+AGG | + | chr1.4:88073942-88073961 | None:intergenic | 35.0% |
| !! | ACCTTTGTTGACTTGGATAT+TGG | - | chr1.4:88072590-88072609 | MS.gene90803:CDS | 35.0% |
| !! | ATTCAAGGCTGATGTTGTTT+TGG | - | chr1.4:88073189-88073208 | MS.gene90803:intron | 35.0% |
| !! | CTGCTATTTGATTTTGATGC+AGG | - | chr1.4:88074160-88074179 | MS.gene90803:CDS | 35.0% |
| !! | CTTTCTTTGAAACTCACTCA+TGG | - | chr1.4:88072022-88072041 | MS.gene90803:intron | 35.0% |
| !! | TAAACAAGAGGCATTTCAAG+AGG | + | chr1.4:88072692-88072711 | None:intergenic | 35.0% |
| !! | TTTCTTTTGAAGGACAAAGG+AGG | + | chr1.4:88074635-88074654 | None:intergenic | 35.0% |
| !!! | GCTGATGTTGTTTTGGTTTT+GGG | - | chr1.4:88073196-88073215 | MS.gene90803:intron | 35.0% |
| AAAGTGATTTACCTCATCCG+CGG | + | chr1.4:88071980-88071999 | None:intergenic | 40.0% | |
| AAATTGAGCCAGATTTCAGG+TGG | + | chr1.4:88071790-88071809 | None:intergenic | 40.0% | |
| AAGAAAATCCTGTGCAAACG+AGG | - | chr1.4:88074649-88074668 | MS.gene90803:CDS | 40.0% | |
| AATACCATGGGATGGATAGA+AGG | - | chr1.4:88072984-88073003 | MS.gene90803:intron | 40.0% | |
| AATGATCTCATCAGGTTCCT+TGG | + | chr1.4:88074393-88074412 | None:intergenic | 40.0% | |
| AATTGAAATGCCCATCGATC+CGG | - | chr1.4:88072655-88072674 | MS.gene90803:intron | 40.0% | |
| ACAATGTAGGAAATTGGGGA+TGG | + | chr1.4:88074902-88074921 | None:intergenic | 40.0% | |
| AGGGATCAAACACTATCATC+GGG | + | chr1.4:88074494-88074513 | None:intergenic | 40.0% | |
| AGTGGAATCATGGGAATATG+AGG | + | chr1.4:88073737-88073756 | None:intergenic | 40.0% | |
| ATACTGGAGAGACAATTTGC+TGG | - | chr1.4:88072927-88072946 | MS.gene90803:intron | 40.0% | |
| ATCATGGGAATATGAGGTCA+CGG | + | chr1.4:88073731-88073750 | None:intergenic | 40.0% | |
| CAACATCAGCCTTGAATGTA+CGG | + | chr1.4:88073186-88073205 | None:intergenic | 40.0% | |
| CAAGGGTCTATAACAATTCC+TGG | - | chr1.4:88072614-88072633 | MS.gene90803:intron | 40.0% | |
| CAATGTAGGAAATTGGGGAT+GGG | + | chr1.4:88074901-88074920 | None:intergenic | 40.0% | |
| CAGGAATTGTTATAGACCCT+TGG | + | chr1.4:88072616-88072635 | None:intergenic | 40.0% | |
| CGAATTTGAACCAGTAACAG+CGG | + | chr1.4:88071647-88071666 | None:intergenic | 40.0% | |
| GAATTTGAACCAGTAACAGC+GGG | + | chr1.4:88071646-88071665 | None:intergenic | 40.0% | |
| GCCAATATCCAAGTCAACAA+AGG | + | chr1.4:88072594-88072613 | None:intergenic | 40.0% | |
| GGAAAATTGAGCCAGATTTC+AGG | + | chr1.4:88071793-88071812 | None:intergenic | 40.0% | |
| GGAAGGGAATAGAAGAGTTA+CGG | + | chr1.4:88071833-88071852 | None:intergenic | 40.0% | |
| GTAGTCTTTCCAGAATCTGA+AGG | + | chr1.4:88072521-88072540 | None:intergenic | 40.0% | |
| GTCAAGGATGCTTCTTAGTT+GGG | - | chr1.4:88072544-88072563 | MS.gene90803:CDS | 40.0% | |
| GTGAATGTTAAGAATGCCCA+AGG | + | chr1.4:88074093-88074112 | None:intergenic | 40.0% | |
| TATTACTTCTGGACTTCTGG+CGG | + | chr1.4:88073484-88073503 | None:intergenic | 40.0% | |
| TCCTATTACTTCTGGACTTC+TGG | + | chr1.4:88073487-88073506 | None:intergenic | 40.0% | |
| TCTCGTGATTAGGAGAAGAT+TGG | - | chr1.4:88072206-88072225 | MS.gene90803:intron | 40.0% | |
| TGGATGCTTCATGTATCTGT+TGG | - | chr1.4:88072226-88072245 | MS.gene90803:intron | 40.0% | |
| TGTCAAGGATGCTTCTTAGT+TGG | - | chr1.4:88072543-88072562 | MS.gene90803:CDS | 40.0% | |
| TGTTGTGAAACTTCAGAGGT+CGG | - | chr1.4:88073430-88073449 | MS.gene90803:intron | 40.0% | |
| ! | CCCTCTCTTACTTGTTCTTT+TGG | - | chr1.4:88073127-88073146 | MS.gene90803:intron | 40.0% |
| ! | GCTTGACCCTAACCTTATTT+AGG | - | chr1.4:88074813-88074832 | MS.gene90803:CDS | 40.0% |
| ! | TGACCCTAACCTTATTTAGG+TGG | - | chr1.4:88074816-88074835 | MS.gene90803:CDS | 40.0% |
| ! | TGGTGTTAAATACCATGGGA+TGG | - | chr1.4:88072976-88072995 | MS.gene90803:intron | 40.0% |
| !! | ACTAAGAAGCATCCTTGACA+AGG | + | chr1.4:88072543-88072562 | None:intergenic | 40.0% |
| !! | AGGAGTACCATCCATTTCAA+TGG | + | chr1.4:88071944-88071963 | None:intergenic | 40.0% |
| !! | GTATGGTGCTACCATTGAAA+TGG | - | chr1.4:88071930-88071949 | MS.gene90803:intron | 40.0% |
| !! | TTGACTTGGATATTGGCCAA+GGG | - | chr1.4:88072597-88072616 | MS.gene90803:intron | 40.0% |
| !! | TTGTTTATCGAGTTGGTGGT+GGG | - | chr1.4:88074249-88074268 | MS.gene90803:CDS | 40.0% |
| !! | TTTGTTTATCGAGTTGGTGG+TGG | - | chr1.4:88074248-88074267 | MS.gene90803:CDS | 40.0% |
| !!! | GGCTGATGTTGTTTTGGTTT+TGG | - | chr1.4:88073195-88073214 | MS.gene90803:intron | 40.0% |
| ACATACCTTACACCATCTGC+TGG | - | chr1.4:88075094-88075113 | MS.gene90803:CDS | 45.0% | |
| AGATAAGGCTACCATCTACC+TGG | + | chr1.4:88073222-88073241 | None:intergenic | 45.0% | |
| AGGAAATTGGGGATGGGAAA+GGG | + | chr1.4:88074895-88074914 | None:intergenic | 45.0% | |
| ATGGATGGTACTCCTGAAAC+TGG | - | chr1.4:88071949-88071968 | MS.gene90803:intron | 45.0% | |
| ATGGGATGGATAGAAGGAGT+GGG | - | chr1.4:88072990-88073009 | MS.gene90803:intron | 45.0% | |
| CAAAAGGCCTATTACACGAC+TGG | - | chr1.4:88073702-88073721 | MS.gene90803:intron | 45.0% | |
| CATTGCCCAAAGATTGCTTC+TGG | - | chr1.4:88074009-88074028 | MS.gene90803:intron | 45.0% | |
| CTGGAAAGACTACCTTGTCA+AGG | - | chr1.4:88072528-88072547 | MS.gene90803:CDS | 45.0% | |
| CTTAGTTGGGCAGCAAAACA+AGG | - | chr1.4:88072557-88072576 | MS.gene90803:CDS | 45.0% | |
| CTTCGTCTTCGACTCCTTAA+TGG | - | chr1.4:88071736-88071755 | MS.gene90803:intron | 45.0% | |
| GATGGGCATTTCAATTGGAG+TGG | + | chr1.4:88072651-88072670 | None:intergenic | 45.0% | |
| GCAAGTTGTAACCACAGTTG+GGG | - | chr1.4:88073619-88073638 | MS.gene90803:intron | 45.0% | |
| GCATGCAATCCGTACATTCA+AGG | - | chr1.4:88073174-88073193 | MS.gene90803:intron | 45.0% | |
| GCCAGAAGTCCAGAAGTAAT+AGG | - | chr1.4:88073483-88073502 | MS.gene90803:intron | 45.0% | |
| GGATCGATGGGCATTTCAAT+TGG | + | chr1.4:88072656-88072675 | None:intergenic | 45.0% | |
| GGCAAGTTGTAACCACAGTT+GGG | - | chr1.4:88073618-88073637 | MS.gene90803:intron | 45.0% | |
| GTAACCACAGTTGGGGTTTA+GGG | - | chr1.4:88073626-88073645 | MS.gene90803:intron | 45.0% | |
| GTCCAACAACAATCACCCTA+GGG | + | chr1.4:88072499-88072518 | None:intergenic | 45.0% | |
| GTTGTGAAACTTCAGAGGTC+GGG | - | chr1.4:88073431-88073450 | MS.gene90803:intron | 45.0% | |
| GTTGTTGGACCTTCAGATTC+TGG | - | chr1.4:88072509-88072528 | MS.gene90803:CDS | 45.0% | |
| TAGGAAATTGGGGATGGGAA+AGG | + | chr1.4:88074896-88074915 | None:intergenic | 45.0% | |
| TCATGGGAATATGAGGTCAC+GGG | + | chr1.4:88073730-88073749 | None:intergenic | 45.0% | |
| TCCTGAAACTGGTTATACCG+CGG | - | chr1.4:88071960-88071979 | MS.gene90803:intron | 45.0% | |
| TGTAACCACAGTTGGGGTTT+AGG | - | chr1.4:88073625-88073644 | MS.gene90803:intron | 45.0% | |
| TTAAGAATGCCCAAGGAGCA+GGG | + | chr1.4:88074086-88074105 | None:intergenic | 45.0% | |
| TTAAGGAGTCGAAGACGAAG+AGG | + | chr1.4:88071736-88071755 | None:intergenic | 45.0% | |
| TTATGGTGCAGCAATGTTGC+CGG | - | chr1.4:88074942-88074961 | MS.gene90803:intron | 45.0% | |
| TTCACAGCTACAACTCTCGT+TGG | + | chr1.4:88074326-88074345 | None:intergenic | 45.0% | |
| TTGCTCAGAGACGTGCTTAA+GGG | - | chr1.4:88073392-88073411 | MS.gene90803:CDS | 45.0% | |
| TTTATGGACACACATCTCCG+AGG | - | chr1.4:88072714-88072733 | MS.gene90803:intron | 45.0% | |
| TTTGCTCAGAGACGTGCTTA+AGG | - | chr1.4:88073391-88073410 | MS.gene90803:CDS | 45.0% | |
| ! | ATATACAGAGCACCTCCCAA+AGG | + | chr1.4:88073307-88073326 | None:intergenic | 45.0% |
| ! | GGTGCTACCATTGAAATGGA+TGG | - | chr1.4:88071934-88071953 | MS.gene90803:intron | 45.0% |
| ! | TTGTTTTCTCCCTGCTCCTT+GGG | - | chr1.4:88074074-88074093 | MS.gene90803:CDS | 45.0% |
| !! | CTTTGAAACTCACTCATGGC+TGG | - | chr1.4:88072026-88072045 | MS.gene90803:intron | 45.0% |
| !! | GCTTAGTAGCTTTGGCCTTT+GGG | - | chr1.4:88074039-88074058 | MS.gene90803:intron | 45.0% |
| !! | GTTGACTTGGATATTGGCCA+AGG | - | chr1.4:88072596-88072615 | MS.gene90803:intron | 45.0% |
| !! | TGCTTAGTAGCTTTGGCCTT+TGG | - | chr1.4:88074038-88074057 | MS.gene90803:intron | 45.0% |
| !!! | TGTTGTTTTGGTTTTGGGCC+AGG | - | chr1.4:88073201-88073220 | MS.gene90803:intron | 45.0% |
| !! | CATTATTATTATTATTATTA+AGG | - | chr1.4:88072344-88072363 | MS.gene90803:intron | 5.0% |
| AACTGGTTATACCGCGGATG+AGG | - | chr1.4:88071966-88071985 | MS.gene90803:intron | 50.0% | |
| ACGGGTTCCAGTCGTGTAAT+AGG | + | chr1.4:88073712-88073731 | None:intergenic | 50.0% | |
| AGGTTCTGCTCCAATTGGCA+AGG | + | chr1.4:88074294-88074313 | None:intergenic | 50.0% | |
| AGTTACGGCGAACTTGAGTC+TGG | + | chr1.4:88071818-88071837 | None:intergenic | 50.0% | |
| CACTCCTTCTATCCATCCCA+TGG | + | chr1.4:88072991-88073010 | None:intergenic | 50.0% | |
| CATGGGATGGATAGAAGGAG+TGG | - | chr1.4:88072989-88073008 | MS.gene90803:intron | 50.0% | |
| CCTTGGCAAATGAGACAGCA+AGG | + | chr1.4:88074376-88074395 | None:intergenic | 50.0% | |
| CTTGGAAGTTCTCCAGCAGA+TGG | + | chr1.4:88075109-88075128 | None:intergenic | 50.0% | |
| GGGCAAGTTGTAACCACAGT+TGG | - | chr1.4:88073617-88073636 | MS.gene90803:intron | 50.0% | |
| GGTCCAACAACAATCACCCT+AGG | + | chr1.4:88072500-88072519 | None:intergenic | 50.0% | |
| GTTAAGAATGCCCAAGGAGC+AGG | + | chr1.4:88074087-88074106 | None:intergenic | 50.0% | |
| GTTACGGCGAACTTGAGTCT+GGG | + | chr1.4:88071817-88071836 | None:intergenic | 50.0% | |
| GTTCTCCAGCAGATGGTGTA+AGG | + | chr1.4:88075102-88075121 | None:intergenic | 50.0% | |
| GTTGGGCAGCAAAACAAGGT+TGG | - | chr1.4:88072561-88072580 | MS.gene90803:CDS | 50.0% | |
| TAACACCATTCCAGCAGCTC+TGG | + | chr1.4:88072964-88072983 | None:intergenic | 50.0% | |
| TCAAGAGGAATTCCCTCCAC+CGG | + | chr1.4:88072677-88072696 | None:intergenic | 50.0% | |
| TCCGCGGTATAACCAGTTTC+AGG | + | chr1.4:88071964-88071983 | None:intergenic | 50.0% | |
| TCGAAGACGAAGAGGTGAGT+CGG | + | chr1.4:88071728-88071747 | None:intergenic | 50.0% | |
| TGAAACTCACTCATGGCTGG+CGG | - | chr1.4:88072029-88072048 | MS.gene90803:intron | 50.0% | |
| ! | ATTTGATTGGTCAGGGCCCT+AGG | - | chr1.4:88072480-88072499 | MS.gene90803:CDS | 50.0% |
| ! | CCAGATTTCAGGTGGAAGCT+CGG | + | chr1.4:88071782-88071801 | None:intergenic | 50.0% |
| ! | CCTTGCTGTCTCATTTGCCA+AGG | - | chr1.4:88074373-88074392 | MS.gene90803:intron | 50.0% |
| ! | GAAGCCCACCTTTGTTGACT+TGG | - | chr1.4:88072583-88072602 | MS.gene90803:CDS | 50.0% |
| ! | TTTGATTGGTCAGGGCCCTA+GGG | - | chr1.4:88072481-88072500 | MS.gene90803:CDS | 50.0% |
| !! | CTTGTTTTCTCCCTGCTCCT+TGG | - | chr1.4:88074073-88074092 | MS.gene90803:CDS | 50.0% |
| !!! | TTGGTTTTGGGCCAGGTAGA+TGG | - | chr1.4:88073208-88073227 | MS.gene90803:intron | 50.0% |
| AATTCCCTCCACCGGATCGA+TGG | + | chr1.4:88072669-88072688 | None:intergenic | 55.0% | |
| ACAAACGGCCTCGTTTGCAC+AGG | + | chr1.4:88074660-88074679 | None:intergenic | 55.0% | |
| ACTCTCGTTGGATCTGCAGC+AGG | + | chr1.4:88074314-88074333 | None:intergenic | 55.0% | |
| AGTGCTTGTCAAGGAGCTCG+CGG | - | chr1.4:88072902-88072921 | MS.gene90803:intron | 55.0% | |
| ATGAGACAGCAAGGACTGCG+TGG | + | chr1.4:88074367-88074386 | None:intergenic | 55.0% | |
| ATTCCCTCCACCGGATCGAT+GGG | + | chr1.4:88072668-88072687 | None:intergenic | 55.0% | |
| CCACAGTTGGGGTTTAGGGA+AGG | - | chr1.4:88073630-88073649 | MS.gene90803:intron | 55.0% | |
| CCGAGCTTCCACCTGAAATC+TGG | - | chr1.4:88071779-88071798 | MS.gene90803:intron | 55.0% | |
| CCTTCCCTAAACCCCAACTG+TGG | + | chr1.4:88073633-88073652 | None:intergenic | 55.0% | |
| GACTTCTGGCGGAACTTCAC+AGG | + | chr1.4:88073473-88073492 | None:intergenic | 55.0% | |
| GCAGCAGGTTCTGCTCCAAT+TGG | + | chr1.4:88074299-88074318 | None:intergenic | 55.0% | |
| GGCCCTAGGGTGATTGTTGT+TGG | - | chr1.4:88072494-88072513 | MS.gene90803:CDS | 55.0% | |
| GGGAAGGTTTGAGCCCATTG+AGG | - | chr1.4:88073646-88073665 | MS.gene90803:intron | 55.0% | |
| GGTCGGGTGGAGTTGTATCT+AGG | - | chr1.4:88073447-88073466 | MS.gene90803:intron | 55.0% | |
| GTGAAACTTCAGAGGTCGGG+TGG | - | chr1.4:88073434-88073453 | MS.gene90803:intron | 55.0% | |
| TGAAATGCCCATCGATCCGG+TGG | - | chr1.4:88072658-88072677 | MS.gene90803:intron | 55.0% | |
| !! | CATTCCAGCAGCTCTGGACT+CGG | + | chr1.4:88072958-88072977 | None:intergenic | 55.0% |
| AAGGCAGAGCGTGGAGCTTG+TGG | + | chr1.4:88074275-88074294 | None:intergenic | 60.0% | |
| AATGCCCATCGATCCGGTGG+AGG | - | chr1.4:88072661-88072680 | MS.gene90803:intron | 60.0% | |
| AATGCCGAGTCCAGAGCTGC+TGG | - | chr1.4:88072951-88072970 | MS.gene90803:intron | 60.0% | |
| ACGGCGAACTTGAGTCTGGG+AGG | + | chr1.4:88071814-88071833 | None:intergenic | 60.0% | |
| ATGCCCATCGATCCGGTGGA+GGG | - | chr1.4:88072662-88072681 | MS.gene90803:intron | 60.0% | |
| CCAATTGGCAAGGCAGAGCG+TGG | + | chr1.4:88074284-88074303 | None:intergenic | 60.0% | |
| CCACGCTCTGCCTTGCCAAT+TGG | - | chr1.4:88074281-88074300 | MS.gene90803:intron | 60.0% | |
| CGAGTCCAGAGCTGCTGGAA+TGG | - | chr1.4:88072956-88072975 | MS.gene90803:intron | 60.0% | |
| GGAGTGGCAGCAATGCATCC+AGG | + | chr1.4:88072635-88072654 | None:intergenic | 60.0% | |
| GTGCTTGTCAAGGAGCTCGC+GGG | - | chr1.4:88072903-88072922 | MS.gene90803:intron | 60.0% | |
| TGCTTGTCAAGGAGCTCGCG+GGG | - | chr1.4:88072904-88072923 | MS.gene90803:intron | 60.0% | |
| CAAGGAGCTCGCGGGGATAC+TGG | - | chr1.4:88072911-88072930 | MS.gene90803:intron | 65.0% | |
| CTCACTCATGGCTGGCGGAG+AGG | - | chr1.4:88072034-88072053 | MS.gene90803:intron | 65.0% | |
| GGTGCAGGTCCCGCTGTTAC+TGG | - | chr1.4:88071634-88071653 | MS.gene90803:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 88071622 | 88075171 | 88071622 | ID=MS.gene90803 |
| chr1.4 | mRNA | 88071622 | 88075171 | 88071622 | ID=MS.gene90803.t1;Parent=MS.gene90803 |
| chr1.4 | exon | 88074962 | 88075171 | 88074962 | ID=MS.gene90803.t1.exon1;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88074962 | 88075171 | 88074962 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88074806 | 88074874 | 88074806 | ID=MS.gene90803.t1.exon2;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88074806 | 88074874 | 88074806 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88074607 | 88074702 | 88074607 | ID=MS.gene90803.t1.exon3;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88074607 | 88074702 | 88074607 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88074058 | 88074299 | 88074058 | ID=MS.gene90803.t1.exon4;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88074058 | 88074299 | 88074058 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88073774 | 88073912 | 88073774 | ID=MS.gene90803.t1.exon5;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88073774 | 88073912 | 88073774 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88073571 | 88073627 | 88073571 | ID=MS.gene90803.t1.exon6;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88073571 | 88073627 | 88073571 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88073282 | 88073416 | 88073282 | ID=MS.gene90803.t1.exon7;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88073282 | 88073416 | 88073282 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88072376 | 88072611 | 88072376 | ID=MS.gene90803.t1.exon8;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88072376 | 88072611 | 88072376 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88071796 | 88071840 | 88071796 | ID=MS.gene90803.t1.exon9;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88071796 | 88071840 | 88071796 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| chr1.4 | exon | 88071622 | 88071709 | 88071622 | ID=MS.gene90803.t1.exon10;Parent=MS.gene90803.t1 |
| chr1.4 | CDS | 88071622 | 88071709 | 88071622 | ID=cds.MS.gene90803.t1;Parent=MS.gene90803.t1 |
| Gene Sequence |
| Protein sequence |
