Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91160.t1 | PWA45176.1 | 41.5 | 183 | 18 | 3 | 22 | 115 | 44 | 226 | 2.20E-19 | 105.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91160.t1 | Q43432 | 95.8 | 48 | 2 | 0 | 22 | 69 | 44 | 91 | 9.3e-19 | 94.7 |
| MS.gene91160.t1 | Q43432 | 89.4 | 47 | 5 | 0 | 69 | 115 | 381 | 427 | 3.3e-16 | 86.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91160.t1 | A0A2U1L863 | 41.5 | 183 | 18 | 3 | 22 | 115 | 44 | 226 | 1.6e-19 | 105.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058010 | MS.gene91160 | 0.805243 | 1.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91160.t1 | MTR_7g081010 | 97.917 | 48 | 1 | 0 | 22 | 69 | 43 | 90 | 3.63e-24 | 97.4 |
| MS.gene91160.t1 | MTR_7g081010 | 91.489 | 47 | 4 | 0 | 69 | 115 | 380 | 426 | 2.70e-21 | 89.4 |
| MS.gene91160.t1 | MTR_1g112870 | 97.917 | 48 | 1 | 0 | 22 | 69 | 44 | 91 | 4.13e-24 | 97.4 |
| MS.gene91160.t1 | MTR_1g112870 | 93.617 | 47 | 3 | 0 | 69 | 115 | 382 | 428 | 1.30e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91160.t1 | AT4G38510 | 95.833 | 48 | 2 | 0 | 22 | 69 | 50 | 97 | 8.60e-25 | 99.4 |
| MS.gene91160.t1 | AT4G38510 | 91.489 | 47 | 4 | 0 | 70 | 116 | 388 | 434 | 3.67e-22 | 92.0 |
| MS.gene91160.t1 | AT1G76030 | 95.833 | 48 | 2 | 0 | 22 | 69 | 42 | 89 | 1.08e-23 | 96.3 |
| MS.gene91160.t1 | AT1G76030 | 93.617 | 47 | 3 | 0 | 69 | 115 | 379 | 425 | 1.27e-21 | 90.1 |
| MS.gene91160.t1 | AT4G38510 | 95.833 | 48 | 2 | 0 | 22 | 69 | 43 | 90 | 1.38e-23 | 95.9 |
| MS.gene91160.t1 | AT4G38510 | 91.489 | 47 | 4 | 0 | 69 | 115 | 380 | 426 | 3.65e-21 | 89.0 |
| MS.gene91160.t1 | AT4G38510 | 95.833 | 48 | 2 | 0 | 22 | 69 | 43 | 90 | 1.38e-23 | 95.9 |
| MS.gene91160.t1 | AT4G38510 | 91.489 | 47 | 4 | 0 | 69 | 115 | 380 | 426 | 3.65e-21 | 89.0 |
| MS.gene91160.t1 | AT4G38510 | 95.833 | 48 | 2 | 0 | 22 | 69 | 43 | 90 | 1.38e-23 | 95.9 |
| MS.gene91160.t1 | AT4G38510 | 91.489 | 47 | 4 | 0 | 69 | 115 | 380 | 426 | 3.65e-21 | 89.0 |
| MS.gene91160.t1 | AT4G38510 | 95.833 | 48 | 2 | 0 | 22 | 69 | 43 | 90 | 1.38e-23 | 95.9 |
| MS.gene91160.t1 | AT4G38510 | 91.489 | 47 | 4 | 0 | 69 | 115 | 380 | 426 | 3.65e-21 | 89.0 |
| MS.gene91160.t1 | AT1G20260 | 95.833 | 48 | 2 | 0 | 22 | 69 | 42 | 89 | 1.42e-23 | 95.9 |
| MS.gene91160.t1 | AT1G20260 | 93.617 | 47 | 3 | 0 | 69 | 115 | 380 | 426 | 1.63e-21 | 90.1 |
Find 43 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACGACCGTACAGTTTAC+TGG | 0.269439 | 7.2:+92603457 | MS.gene91160:CDS |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 7.2:+92604449 | MS.gene91160:intron |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 7.2:+92604450 | MS.gene91160:intron |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 7.2:+92603421 | MS.gene91160:intron |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 7.2:+92603053 | MS.gene91160:intron |
| TGCCTGGACATCCTTTCTAA+TGG | 0.393999 | 7.2:-92604661 | None:intergenic |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 7.2:+92603115 | MS.gene91160:CDS |
| GGAAAGATTTGAAGGAAGAG+TGG | 0.437385 | 7.2:+92604793 | MS.gene91160:CDS |
| CAATGACAGCTTTCATTGCC+TGG | 0.443802 | 7.2:-92604677 | None:intergenic |
| CTTGAAGTGGAAAGATTTGA+AGG | 0.444424 | 7.2:+92604785 | MS.gene91160:intron |
| CAGGCAATGAAAGCTGTCAT+TGG | 0.450627 | 7.2:+92604678 | MS.gene91160:CDS |
| ACTATTGATCAGGTATTTGA+AGG | 0.472388 | 7.2:+92603412 | MS.gene91160:intron |
| GGACAAGTTCTCGAGGTTGA+TGG | 0.472504 | 7.2:+92603095 | MS.gene91160:CDS |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 7.2:+92603059 | MS.gene91160:CDS |
| AGTTTCTTCAATCCATCTTG+TGG | 0.482139 | 7.2:-92602985 | None:intergenic |
| GATGAATAAGAAGAGGAGAA+AGG | 0.490297 | 7.2:+92604872 | MS.gene91160:CDS |
| CTCGAGAACTTGTCCACGCC+GGG | 0.500617 | 7.2:-92603087 | None:intergenic |
| TGCCATTAGAAAGGATGTCC+AGG | 0.512457 | 7.2:+92604659 | MS.gene91160:CDS |
| AAAGGTGGGCACGTGAAGAA+AGG | 0.517883 | 7.2:+92604838 | MS.gene91160:CDS |
| GAAAGATTTGAAGGAAGAGT+GGG | 0.518344 | 7.2:+92604794 | MS.gene91160:CDS |
| TGCAAATTATGCCATTAGAA+AGG | 0.519147 | 7.2:+92604650 | MS.gene91160:CDS |
| ACCGCTGAAATTCCACAAGA+TGG | 0.530335 | 7.2:+92602973 | MS.gene91160:CDS |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 7.2:+92604469 | MS.gene91160:CDS |
| TCTCGAGGTTGATGGCGAAA+AGG | 0.540595 | 7.2:+92603103 | MS.gene91160:CDS |
| GTATCTTTCACTTGTATCCA+AGG | 0.546670 | 7.2:+92603011 | MS.gene91160:CDS |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 7.2:+92604451 | MS.gene91160:intron |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 7.2:+92604455 | MS.gene91160:intron |
| CAGAGTTGAAACTCGAAGAA+AGG | 0.577506 | 7.2:+92604820 | MS.gene91160:CDS |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 7.2:+92604493 | MS.gene91160:CDS |
| AGCACTTTCATCTGAGGACC+TGG | 0.579733 | 7.2:+92604707 | MS.gene91160:CDS |
| AGTTGAAACTCGAAGAAAGG+TGG | 0.586523 | 7.2:+92604823 | MS.gene91160:CDS |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 7.2:+92603422 | MS.gene91160:intron |
| GTTGAAACTCGAAGAAAGGT+GGG | 0.610747 | 7.2:+92604824 | MS.gene91160:CDS |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 7.2:+92604701 | MS.gene91160:CDS |
| GACCGTACAGTTTACTGGAG+AGG | 0.629013 | 7.2:+92603462 | MS.gene91160:CDS |
| TACCTCTCCAGTAAACTGTA+CGG | 0.631119 | 7.2:-92603464 | None:intergenic |
| TCCATCTTGTGGAATTTCAG+CGG | 0.633209 | 7.2:-92602974 | None:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 7.2:+92604454 | MS.gene91160:intron |
| GGCGATGGAACTACCCGGCG+TGG | 0.636786 | 7.2:+92603074 | MS.gene91160:CDS |
| CCTCGAGAACTTGTCCACGC+CGG | 0.642978 | 7.2:-92603088 | None:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 7.2:-92604507 | None:intergenic |
| CCGGCGTGGACAAGTTCTCG+AGG | 0.672366 | 7.2:+92603088 | MS.gene91160:CDS |
| GTTTAGGCGATGGAACTACC+CGG | 0.676003 | 7.2:+92603069 | MS.gene91160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAGAATAGTAATC+AGG | - | chr7.2:92604036-92604055 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAAAAAAACAGC+TGG | - | chr7.2:92604751-92604770 | None:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | - | chr7.2:92603575-92603594 | None:intergenic | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | - | chr7.2:92603574-92603593 | None:intergenic | 15.0% |
| !! | AAACTATAAAATGACGTTAA+AGG | - | chr7.2:92603377-92603396 | None:intergenic | 20.0% |
| !! | ACATATGTTTCTTAATCAAA+AGG | + | chr7.2:92604393-92604412 | MS.gene91160:intron | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | - | chr7.2:92604536-92604555 | None:intergenic | 20.0% |
| !! | CTTTATAAAAACTATTGATC+AGG | + | chr7.2:92603402-92603421 | MS.gene91160:intron | 20.0% |
| !! | GTAATTGTAAACTATCTTAT+TGG | + | chr7.2:92604558-92604577 | MS.gene91160:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | - | chr7.2:92604535-92604554 | None:intergenic | 20.0% |
| !! | TAAATTCTGCTTAGAAAAAA+GGG | + | chr7.2:92603965-92603984 | MS.gene91160:intron | 20.0% |
| !! | TAACAGTTAATGCATTATTT+AGG | - | chr7.2:92603630-92603649 | None:intergenic | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | - | chr7.2:92603747-92603766 | None:intergenic | 20.0% |
| !! | TCTTAATTAACTCAAAAGAT+AGG | - | chr7.2:92603182-92603201 | None:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | - | chr7.2:92603748-92603767 | None:intergenic | 20.0% |
| !!! | ACTATTCTATTAATTTGTTC+TGG | + | chr7.2:92604040-92604059 | MS.gene91160:intron | 20.0% |
| ! | AAATTCTGCTTAGAAAAAAG+GGG | + | chr7.2:92603966-92603985 | MS.gene91160:intron | 25.0% |
| ! | CTAAATTCTGCTTAGAAAAA+AGG | + | chr7.2:92603964-92603983 | MS.gene91160:intron | 25.0% |
| ! | TAATTAACTCAAAAGATAGG+AGG | - | chr7.2:92603179-92603198 | None:intergenic | 25.0% |
| ! | TCAATTCAATAACCAATACT+TGG | - | chr7.2:92604132-92604151 | None:intergenic | 25.0% |
| ! | TGAAAAAGATGAATAAGAAG+AGG | + | chr7.2:92604865-92604884 | MS.gene91160:CDS | 25.0% |
| ! | TGACAATCTCTTAGATATTT+CGG | - | chr7.2:92603043-92603062 | None:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | + | chr7.2:92603595-92603614 | MS.gene91160:intron | 25.0% |
| !! | ATGGAAGAACATTGATTATT+GGG | - | chr7.2:92604321-92604340 | None:intergenic | 25.0% |
| !!! | ATTCTATTAATTTGTTCTGG+AGG | + | chr7.2:92604043-92604062 | MS.gene91160:intron | 25.0% |
| !!! | TTCTATTAATTTGTTCTGGA+GGG | + | chr7.2:92604044-92604063 | MS.gene91160:intron | 25.0% |
| !!! | TTTAACTTGAAATTTAGCAG+TGG | + | chr7.2:92603887-92603906 | MS.gene91160:intron | 25.0% |
| ACACTCTAATGATGTATCAT+TGG | + | chr7.2:92604426-92604445 | MS.gene91160:intron | 30.0% | |
| ACCTTGATGTATCAATGAAA+AGG | - | chr7.2:92604168-92604187 | None:intergenic | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | + | chr7.2:92603412-92603431 | MS.gene91160:intron | 30.0% | |
| AGAGAAAATTAGTAGATACC+AGG | - | chr7.2:92604728-92604747 | None:intergenic | 30.0% | |
| ATACATGTAAACCTAGAAAC+TGG | + | chr7.2:92603938-92603957 | MS.gene91160:intron | 30.0% | |
| CAGGGATCATATATATTTCA+TGG | - | chr7.2:92604197-92604216 | None:intergenic | 30.0% | |
| CTCAATGAAATTTGGATTAC+AGG | + | chr7.2:92603603-92603622 | MS.gene91160:intron | 30.0% | |
| GAGATTGTCAATATTCGTTT+AGG | + | chr7.2:92603053-92603072 | MS.gene91160:intron | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | - | chr7.2:92604259-92604278 | None:intergenic | 30.0% | |
| TGCAAATTATGCCATTAGAA+AGG | + | chr7.2:92604650-92604669 | MS.gene91160:CDS | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | - | chr7.2:92603743-92603762 | None:intergenic | 30.0% | |
| TTGAAATTCTAGTGATCACA+TGG | + | chr7.2:92604004-92604023 | MS.gene91160:intron | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | + | chr7.2:92603831-92603850 | MS.gene91160:intron | 30.0% | |
| ! | GATGGAAGAACATTGATTAT+TGG | - | chr7.2:92604322-92604341 | None:intergenic | 30.0% |
| ! | TCCTTTTCATTGATACATCA+AGG | + | chr7.2:92604164-92604183 | MS.gene91160:intron | 30.0% |
| ! | TTTCTTAATCAAAAGGTGTG+TGG | + | chr7.2:92604400-92604419 | MS.gene91160:intron | 30.0% |
| !! | TCTATTAATTTGTTCTGGAG+GGG | + | chr7.2:92604045-92604064 | MS.gene91160:intron | 30.0% |
| AAGAATACTAGTCAGAAGCT+CGG | - | chr7.2:92603249-92603268 | None:intergenic | 35.0% | |
| AATAAAGCAGACAACGATTG+AGG | - | chr7.2:92603282-92603301 | None:intergenic | 35.0% | |
| AATACTTGGCTAAATTGCAG+AGG | - | chr7.2:92604118-92604137 | None:intergenic | 35.0% | |
| AGATATTTCGGTACATACCT+TGG | - | chr7.2:92603031-92603050 | None:intergenic | 35.0% | |
| AGTTTCTTCAATCCATCTTG+TGG | - | chr7.2:92602988-92603007 | None:intergenic | 35.0% | |
| ATAACACATAATTGAGCCGA+TGG | + | chr7.2:92603682-92603701 | MS.gene91160:intron | 35.0% | |
| ATGTTCTTCCATCACTATCT+CGG | + | chr7.2:92604329-92604348 | MS.gene91160:intron | 35.0% | |
| CAATCTCATACAATTCGTCA+GGG | - | chr7.2:92604215-92604234 | None:intergenic | 35.0% | |
| CTTCAAATCTTTCCACTTCA+AGG | - | chr7.2:92604787-92604806 | None:intergenic | 35.0% | |
| CTTGAAGTGGAAAGATTTGA+AGG | + | chr7.2:92604785-92604804 | MS.gene91160:intron | 35.0% | |
| GAAAGATTTGAAGGAAGAGT+GGG | + | chr7.2:92604794-92604813 | MS.gene91160:CDS | 35.0% | |
| GATGAATAAGAAGAGGAGAA+AGG | + | chr7.2:92604872-92604891 | MS.gene91160:CDS | 35.0% | |
| GATTATTGGGTATATCTGCT+CGG | - | chr7.2:92604308-92604327 | None:intergenic | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | + | chr7.2:92604367-92604386 | MS.gene91160:intron | 35.0% | |
| GTAGGTAGCAGTTTATAACA+AGG | - | chr7.2:92603716-92603735 | None:intergenic | 35.0% | |
| GTATCTTTCACTTGTATCCA+AGG | + | chr7.2:92603011-92603030 | MS.gene91160:CDS | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | + | chr7.2:92604772-92604791 | MS.gene91160:intron | 35.0% | |
| TCTGCAATTTAGCCAAGTAT+TGG | + | chr7.2:92604117-92604136 | MS.gene91160:intron | 35.0% | |
| TTCTCTCACTCTACATTCAA+CGG | + | chr7.2:92603509-92603528 | MS.gene91160:intron | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | + | chr7.2:92603422-92603441 | MS.gene91160:intron | 35.0% |
| ! | GAATTTAGCTTCCAGTTTCT+AGG | - | chr7.2:92603952-92603971 | None:intergenic | 35.0% |
| !! | CTATTAATTTGTTCTGGAGG+GGG | + | chr7.2:92604046-92604065 | MS.gene91160:intron | 35.0% |
| AGAATACTAGTCAGAAGCTC+GGG | - | chr7.2:92603248-92603267 | None:intergenic | 40.0% | |
| AGTTGAAACTCGAAGAAAGG+TGG | + | chr7.2:92604823-92604842 | MS.gene91160:CDS | 40.0% | |
| ATCATCAACCGAGATAGTGA+TGG | - | chr7.2:92604340-92604359 | None:intergenic | 40.0% | |
| ATGATGGTTATGCATGCTGA+AGG | - | chr7.2:92603147-92603166 | None:intergenic | 40.0% | |
| ATGCAACACAGTCTGAAGAA+GGG | - | chr7.2:92603817-92603836 | None:intergenic | 40.0% | |
| CAGAGTTGAAACTCGAAGAA+AGG | + | chr7.2:92604820-92604839 | MS.gene91160:CDS | 40.0% | |
| CCAATCTCATACAATTCGTC+AGG | - | chr7.2:92604216-92604235 | None:intergenic | 40.0% | |
| CCTGACGAATTGTATGAGAT+TGG | + | chr7.2:92604213-92604232 | MS.gene91160:intron | 40.0% | |
| GCTTAGGTGATAGTTACGAT+TGG | - | chr7.2:92603773-92603792 | None:intergenic | 40.0% | |
| GGAAAGATTTGAAGGAAGAG+TGG | + | chr7.2:92604793-92604812 | MS.gene91160:CDS | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | + | chr7.2:92603059-92603078 | MS.gene91160:CDS | 40.0% | |
| GTTGAAACTCGAAGAAAGGT+GGG | + | chr7.2:92604824-92604843 | MS.gene91160:CDS | 40.0% | |
| TAACAAGGATAGCCAACCAT+CGG | - | chr7.2:92603701-92603720 | None:intergenic | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | + | chr7.2:92604238-92604257 | MS.gene91160:intron | 40.0% | |
| TACCTCTCCAGTAAACTGTA+CGG | - | chr7.2:92603467-92603486 | None:intergenic | 40.0% | |
| TCCATCTTGTGGAATTTCAG+CGG | - | chr7.2:92602977-92602996 | None:intergenic | 40.0% | |
| TTCTGCTTAGAAAAAAGGGG+AGG | + | chr7.2:92603969-92603988 | MS.gene91160:intron | 40.0% | |
| TTGGCTAAATTGCAGAGGAA+CGG | - | chr7.2:92604113-92604132 | None:intergenic | 40.0% | |
| TTTACGACCGTACAGTTTAC+TGG | + | chr7.2:92603457-92603476 | MS.gene91160:CDS | 40.0% | |
| ! | ATTATCTGGGACGGTTTAGT+AGG | - | chr7.2:92603734-92603753 | None:intergenic | 40.0% |
| ! | CAGGTATTTGAAGGTACATC+TGG | + | chr7.2:92603421-92603440 | MS.gene91160:intron | 40.0% |
| !! | AGAAGAAGCACTTTCATCTG+AGG | + | chr7.2:92604701-92604720 | MS.gene91160:CDS | 40.0% |
| ACCGCTGAAATTCCACAAGA+TGG | + | chr7.2:92602973-92602992 | MS.gene91160:CDS | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | - | chr7.2:92604510-92604529 | None:intergenic | 45.0% | |
| CAATGACAGCTTTCATTGCC+TGG | - | chr7.2:92604680-92604699 | None:intergenic | 45.0% | |
| CACATAATTGAGCCGATGGT+TGG | + | chr7.2:92603686-92603705 | MS.gene91160:intron | 45.0% | |
| CAGGCAATGAAAGCTGTCAT+TGG | + | chr7.2:92604678-92604697 | MS.gene91160:CDS | 45.0% | |
| CATGCAACACAGTCTGAAGA+AGG | - | chr7.2:92603818-92603837 | None:intergenic | 45.0% | |
| GAATACTAGTCAGAAGCTCG+GGG | - | chr7.2:92603247-92603266 | None:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | - | chr7.2:92604514-92604533 | None:intergenic | 45.0% | |
| TAGGAGGCAAGTACAGATGA+TGG | - | chr7.2:92603163-92603182 | None:intergenic | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | + | chr7.2:92604493-92604512 | MS.gene91160:CDS | 45.0% | |
| TGCAACACAGTCTGAAGAAG+GGG | - | chr7.2:92603816-92603835 | None:intergenic | 45.0% | |
| TGCCATTAGAAAGGATGTCC+AGG | + | chr7.2:92604659-92604678 | MS.gene91160:CDS | 45.0% | |
| TGCCTGGACATCCTTTCTAA+TGG | - | chr7.2:92604664-92604683 | None:intergenic | 45.0% | |
| ! | AAGGGGGATAACAGCAGTTT+TGG | - | chr7.2:92603799-92603818 | None:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | - | chr7.2:92603789-92603808 | None:intergenic | 45.0% |
| AAAGGTGGGCACGTGAAGAA+AGG | + | chr7.2:92604838-92604857 | MS.gene91160:CDS | 50.0% | |
| AATTGCAGAGGAACGGAGGA+TGG | - | chr7.2:92604106-92604125 | None:intergenic | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | + | chr7.2:92604707-92604726 | MS.gene91160:CDS | 50.0% | |
| ATTGCAGAGGAACGGAGGAT+GGG | - | chr7.2:92604105-92604124 | None:intergenic | 50.0% | |
| GACCGTACAGTTTACTGGAG+AGG | + | chr7.2:92603462-92603481 | MS.gene91160:CDS | 50.0% | |
| GCAACACAGTCTGAAGAAGG+GGG | - | chr7.2:92603815-92603834 | None:intergenic | 50.0% | |
| GCTAAATTGCAGAGGAACGG+AGG | - | chr7.2:92604110-92604129 | None:intergenic | 50.0% | |
| GGACAAGTTCTCGAGGTTGA+TGG | + | chr7.2:92603095-92603114 | MS.gene91160:CDS | 50.0% | |
| GTTTAGGCGATGGAACTACC+CGG | + | chr7.2:92603069-92603088 | MS.gene91160:CDS | 50.0% | |
| TGGCGAAAAGGCTGTTGTTC+AGG | + | chr7.2:92603115-92603134 | MS.gene91160:CDS | 50.0% | |
| TGGGGAGGGAATGACTAGAA+AGG | + | chr7.2:92604469-92604488 | MS.gene91160:CDS | 50.0% | |
| ! | ACCACTGCAGAGTGCTATTG+GGG | + | chr7.2:92604451-92604470 | MS.gene91160:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | + | chr7.2:92604450-92604469 | MS.gene91160:intron | 50.0% |
| ! | CAGAAGCTCGGGGAACATTT+TGG | - | chr7.2:92603237-92603256 | None:intergenic | 50.0% |
| ! | TCACCACTGCAGAGTGCTAT+TGG | + | chr7.2:92604449-92604468 | MS.gene91160:intron | 50.0% |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | + | chr7.2:92604057-92604076 | MS.gene91160:intron | 50.0% |
| !! | TCTCGAGGTTGATGGCGAAA+AGG | + | chr7.2:92603103-92603122 | MS.gene91160:CDS | 50.0% |
| TCCCCAATAGCACTCTGCAG+TGG | - | chr7.2:92604455-92604474 | None:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | + | chr7.2:92604454-92604473 | MS.gene91160:intron | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | + | chr7.2:92604455-92604474 | MS.gene91160:intron | 55.0% |
| CCTCGAGAACTTGTCCACGC+CGG | - | chr7.2:92603091-92603110 | None:intergenic | 60.0% | |
| CTCGAGAACTTGTCCACGCC+GGG | - | chr7.2:92603090-92603109 | None:intergenic | 60.0% | |
| CCGGCGTGGACAAGTTCTCG+AGG | + | chr7.2:92603088-92603107 | MS.gene91160:CDS | 65.0% | |
| GGCGATGGAACTACCCGGCG+TGG | + | chr7.2:92603074-92603093 | MS.gene91160:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 92602967 | 92604911 | 92602967 | ID=MS.gene91160 |
| chr7.2 | mRNA | 92602967 | 92604911 | 92602967 | ID=MS.gene91160.t1;Parent=MS.gene91160 |
| chr7.2 | exon | 92602967 | 92603032 | 92602967 | ID=MS.gene91160.t1.exon1;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92602967 | 92603032 | 92602967 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| chr7.2 | exon | 92603056 | 92603136 | 92603056 | ID=MS.gene91160.t1.exon2;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92603056 | 92603136 | 92603056 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| chr7.2 | exon | 92603424 | 92603483 | 92603424 | ID=MS.gene91160.t1.exon3;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92603424 | 92603483 | 92603424 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| chr7.2 | exon | 92604461 | 92604514 | 92604461 | ID=MS.gene91160.t1.exon4;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92604461 | 92604514 | 92604461 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| chr7.2 | exon | 92604645 | 92604728 | 92604645 | ID=MS.gene91160.t1.exon5;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92604645 | 92604728 | 92604645 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| chr7.2 | exon | 92604792 | 92604911 | 92604792 | ID=MS.gene91160.t1.exon6;Parent=MS.gene91160.t1 |
| chr7.2 | CDS | 92604792 | 92604911 | 92604792 | ID=cds.MS.gene91160.t1;Parent=MS.gene91160.t1 |
| Gene Sequence |
| Protein sequence |
