Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91209.t1 | XP_013463298.1 | 65.3 | 357 | 28 | 6 | 1 | 263 | 1 | 355 | 6.90E-114 | 420.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91209.t1 | A2A1A0 | 31.1 | 338 | 139 | 8 | 14 | 260 | 14 | 348 | 2.5e-32 | 140.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91209.t1 | A0A072V5M6 | 65.3 | 357 | 28 | 6 | 1 | 263 | 1 | 355 | 5.0e-114 | 420.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056050 | MS.gene91209 | 0.810418 | 1.16E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91209.t1 | MTR_2g437380 | 65.266 | 357 | 28 | 6 | 1 | 263 | 1 | 355 | 1.43e-152 | 430 |
MS.gene91209.t1 | MTR_2g437380 | 60.317 | 252 | 25 | 5 | 85 | 263 | 12 | 261 | 2.69e-92 | 273 |
MS.gene91209.t1 | MTR_7g063730 | 31.778 | 343 | 137 | 8 | 14 | 263 | 26 | 364 | 3.56e-42 | 148 |
MS.gene91209.t1 | MTR_7g062580 | 30.029 | 343 | 143 | 10 | 14 | 263 | 17 | 355 | 2.09e-40 | 143 |
MS.gene91209.t1 | MTR_2g072910 | 29.480 | 346 | 142 | 11 | 14 | 263 | 14 | 353 | 1.97e-38 | 138 |
MS.gene91209.t1 | MTR_7g062550 | 28.571 | 343 | 148 | 9 | 14 | 263 | 22 | 360 | 3.42e-36 | 132 |
MS.gene91209.t1 | MTR_7g062570 | 29.738 | 343 | 144 | 10 | 14 | 263 | 17 | 355 | 5.68e-36 | 131 |
MS.gene91209.t1 | MTR_7g062600 | 28.818 | 347 | 143 | 11 | 14 | 263 | 13 | 352 | 1.44e-31 | 119 |
MS.gene91209.t1 | MTR_2g072890 | 26.590 | 346 | 153 | 10 | 14 | 263 | 14 | 354 | 2.10e-31 | 119 |
MS.gene91209.t1 | MTR_5g048550 | 28.070 | 342 | 150 | 9 | 14 | 263 | 10 | 347 | 6.20e-30 | 115 |
MS.gene91209.t1 | MTR_3g026150 | 27.761 | 335 | 142 | 10 | 14 | 253 | 21 | 350 | 2.98e-26 | 105 |
MS.gene91209.t1 | MTR_5g082750 | 25.460 | 326 | 148 | 9 | 14 | 244 | 11 | 336 | 1.00e-25 | 103 |
MS.gene91209.t1 | MTR_3g117420 | 28.527 | 319 | 122 | 9 | 43 | 263 | 43 | 353 | 3.43e-25 | 102 |
MS.gene91209.t1 | MTR_8g074070 | 28.704 | 324 | 144 | 11 | 17 | 260 | 15 | 331 | 1.29e-24 | 100 |
MS.gene91209.t1 | MTR_7g068650 | 26.126 | 333 | 142 | 10 | 14 | 244 | 12 | 342 | 3.80e-24 | 99.8 |
MS.gene91209.t1 | MTR_4g015790 | 23.714 | 350 | 156 | 9 | 17 | 256 | 14 | 362 | 8.17e-22 | 93.6 |
MS.gene91209.t1 | MTR_8g074070 | 27.114 | 343 | 144 | 11 | 17 | 260 | 15 | 350 | 9.25e-22 | 93.2 |
MS.gene91209.t1 | MTR_3g070860 | 22.769 | 325 | 152 | 9 | 17 | 244 | 15 | 337 | 2.17e-21 | 92.0 |
MS.gene91209.t1 | MTR_5g048740 | 43.519 | 108 | 53 | 1 | 164 | 263 | 239 | 346 | 5.36e-21 | 90.9 |
MS.gene91209.t1 | MTR_5g048570 | 39.683 | 126 | 62 | 3 | 152 | 263 | 220 | 345 | 1.53e-20 | 89.7 |
MS.gene91209.t1 | MTR_5g048570 | 30.469 | 128 | 63 | 3 | 14 | 120 | 10 | 132 | 2.87e-11 | 63.2 |
MS.gene91209.t1 | MTR_0009s0400 | 37.963 | 108 | 59 | 1 | 164 | 263 | 36 | 143 | 1.56e-20 | 85.5 |
MS.gene91209.t1 | MTR_0009s0050 | 38.889 | 108 | 58 | 1 | 164 | 263 | 60 | 167 | 2.09e-20 | 85.9 |
MS.gene91209.t1 | MTR_8g024120 | 39.815 | 108 | 57 | 1 | 164 | 263 | 235 | 342 | 3.21e-20 | 89.0 |
MS.gene91209.t1 | MTR_8g074050 | 26.752 | 314 | 128 | 9 | 43 | 260 | 43 | 350 | 4.21e-20 | 88.6 |
MS.gene91209.t1 | MTR_5g032870 | 35.366 | 164 | 78 | 5 | 120 | 259 | 179 | 338 | 4.25e-20 | 88.6 |
MS.gene91209.t1 | MTR_2g072910 | 27.341 | 267 | 100 | 10 | 14 | 192 | 14 | 274 | 7.00e-20 | 87.0 |
MS.gene91209.t1 | MTR_0009s0050 | 38.889 | 108 | 58 | 1 | 164 | 263 | 142 | 249 | 1.22e-19 | 85.9 |
MS.gene91209.t1 | MTR_5g055680 | 38.889 | 108 | 58 | 1 | 164 | 263 | 240 | 347 | 1.26e-19 | 87.4 |
MS.gene91209.t1 | MTR_0009s0050 | 38.889 | 108 | 58 | 1 | 164 | 263 | 142 | 249 | 1.30e-19 | 85.9 |
MS.gene91209.t1 | MTR_5g048850 | 38.889 | 108 | 58 | 1 | 164 | 263 | 240 | 347 | 2.90e-19 | 86.3 |
MS.gene91209.t1 | MTR_0009s0050 | 38.889 | 108 | 58 | 1 | 164 | 263 | 240 | 347 | 3.39e-19 | 85.9 |
MS.gene91209.t1 | MTR_0009s0050 | 38.889 | 108 | 58 | 1 | 164 | 263 | 240 | 347 | 3.73e-19 | 85.9 |
MS.gene91209.t1 | MTR_5g032880 | 34.839 | 155 | 71 | 4 | 120 | 248 | 171 | 321 | 4.07e-19 | 87.0 |
MS.gene91209.t1 | MTR_5g032880 | 32.484 | 157 | 80 | 4 | 120 | 252 | 517 | 671 | 3.71e-16 | 78.2 |
MS.gene91209.t1 | MTR_7g062560 | 39.604 | 101 | 53 | 1 | 164 | 256 | 245 | 345 | 5.80e-19 | 85.5 |
MS.gene91209.t1 | MTR_8g064200 | 40.741 | 108 | 56 | 1 | 164 | 263 | 246 | 353 | 5.94e-19 | 85.5 |
MS.gene91209.t1 | MTR_8g064200 | 40.741 | 108 | 56 | 1 | 164 | 263 | 251 | 358 | 6.44e-19 | 85.5 |
MS.gene91209.t1 | MTR_5g055900 | 38.889 | 108 | 58 | 1 | 164 | 263 | 240 | 347 | 7.85e-19 | 85.1 |
MS.gene91209.t1 | MTR_0009s0480 | 37.037 | 108 | 60 | 1 | 164 | 263 | 239 | 346 | 1.18e-18 | 84.3 |
MS.gene91209.t1 | MTR_5g055690 | 36.111 | 108 | 61 | 1 | 164 | 263 | 241 | 348 | 1.26e-18 | 84.3 |
MS.gene91209.t1 | MTR_0328s0030 | 40.741 | 108 | 56 | 1 | 164 | 263 | 238 | 345 | 1.41e-18 | 84.3 |
MS.gene91209.t1 | MTR_5g055820 | 38.095 | 105 | 57 | 1 | 164 | 260 | 241 | 345 | 1.72e-18 | 84.0 |
MS.gene91209.t1 | MTR_0056s0160 | 39.815 | 108 | 57 | 1 | 164 | 263 | 125 | 232 | 2.83e-18 | 81.6 |
MS.gene91209.t1 | MTR_5g048470 | 38.889 | 108 | 58 | 1 | 164 | 263 | 247 | 354 | 5.78e-18 | 82.8 |
MS.gene91209.t1 | MTR_5g048470 | 30.469 | 128 | 67 | 2 | 14 | 120 | 15 | 141 | 7.96e-12 | 64.7 |
MS.gene91209.t1 | MTR_7g045650 | 37.778 | 135 | 57 | 4 | 14 | 125 | 22 | 152 | 6.99e-18 | 82.0 |
MS.gene91209.t1 | MTR_6g015950 | 44.086 | 93 | 44 | 1 | 164 | 248 | 231 | 323 | 9.18e-18 | 81.6 |
MS.gene91209.t1 | MTR_3g026150 | 28.512 | 242 | 97 | 7 | 85 | 253 | 9 | 247 | 1.49e-17 | 80.1 |
MS.gene91209.t1 | MTR_3g092890 | 36.697 | 109 | 61 | 1 | 163 | 263 | 228 | 336 | 1.28e-16 | 78.6 |
MS.gene91209.t1 | MTR_4g087140 | 33.333 | 153 | 76 | 4 | 120 | 247 | 179 | 330 | 1.38e-16 | 78.6 |
MS.gene91209.t1 | MTR_5g055800 | 37.037 | 108 | 59 | 2 | 164 | 263 | 240 | 346 | 1.49e-16 | 78.6 |
MS.gene91209.t1 | MTR_8g009080 | 37.838 | 111 | 58 | 2 | 164 | 263 | 286 | 396 | 1.50e-16 | 79.0 |
MS.gene91209.t1 | MTR_3g063180 | 35.780 | 109 | 58 | 2 | 164 | 260 | 240 | 348 | 2.05e-16 | 78.2 |
MS.gene91209.t1 | MTR_8g009090 | 37.037 | 108 | 55 | 3 | 164 | 259 | 253 | 359 | 4.82e-16 | 77.0 |
MS.gene91209.t1 | MTR_1g034140 | 40.659 | 91 | 44 | 2 | 164 | 244 | 228 | 318 | 5.04e-16 | 77.0 |
MS.gene91209.t1 | MTR_8g062600 | 35.088 | 114 | 60 | 2 | 164 | 263 | 259 | 372 | 8.21e-16 | 76.6 |
MS.gene91209.t1 | MTR_4g087110 | 29.878 | 164 | 88 | 4 | 120 | 258 | 179 | 340 | 1.67e-15 | 75.5 |
MS.gene91209.t1 | MTR_7g081710 | 36.792 | 106 | 58 | 2 | 164 | 260 | 242 | 347 | 2.58e-15 | 75.1 |
MS.gene91209.t1 | MTR_8g469400 | 34.545 | 110 | 58 | 2 | 164 | 259 | 246 | 355 | 2.69e-15 | 75.1 |
MS.gene91209.t1 | MTR_4g093840 | 25.246 | 305 | 136 | 10 | 47 | 260 | 59 | 362 | 3.24e-15 | 74.7 |
MS.gene91209.t1 | MTR_2g069300 | 36.036 | 111 | 60 | 2 | 164 | 263 | 247 | 357 | 4.43e-15 | 74.3 |
MS.gene91209.t1 | MTR_3g072810 | 39.326 | 89 | 46 | 1 | 164 | 244 | 233 | 321 | 1.48e-14 | 72.8 |
MS.gene91209.t1 | MTR_1g093120 | 38.318 | 107 | 55 | 2 | 164 | 259 | 259 | 365 | 1.50e-14 | 72.8 |
MS.gene91209.t1 | MTR_8g009110 | 34.579 | 107 | 59 | 2 | 164 | 259 | 254 | 360 | 1.61e-14 | 72.8 |
MS.gene91209.t1 | MTR_1g070085 | 38.298 | 94 | 50 | 1 | 163 | 248 | 152 | 245 | 1.72e-14 | 71.6 |
MS.gene91209.t1 | MTR_2g025120 | 35.294 | 102 | 57 | 2 | 164 | 256 | 194 | 295 | 1.84e-14 | 72.4 |
MS.gene91209.t1 | MTR_8g008930 | 36.111 | 108 | 56 | 3 | 164 | 259 | 254 | 360 | 1.86e-14 | 72.8 |
MS.gene91209.t1 | MTR_8g009180 | 32.710 | 107 | 61 | 2 | 164 | 259 | 183 | 289 | 2.15e-14 | 71.6 |
MS.gene91209.t1 | MTR_1g070085 | 38.298 | 94 | 50 | 1 | 163 | 248 | 230 | 323 | 2.32e-14 | 72.0 |
MS.gene91209.t1 | MTR_1g070085 | 38.298 | 94 | 50 | 1 | 163 | 248 | 230 | 323 | 2.32e-14 | 72.0 |
MS.gene91209.t1 | MTR_1g033810 | 34.653 | 101 | 58 | 1 | 164 | 256 | 242 | 342 | 2.37e-14 | 72.4 |
MS.gene91209.t1 | MTR_1g033810 | 35.043 | 117 | 49 | 4 | 27 | 119 | 22 | 135 | 4.81e-11 | 62.4 |
MS.gene91209.t1 | MTR_3g117485 | 35.461 | 141 | 62 | 5 | 123 | 237 | 120 | 257 | 3.55e-14 | 70.9 |
MS.gene91209.t1 | MTR_2g069190 | 33.645 | 107 | 60 | 2 | 164 | 259 | 260 | 366 | 5.71e-14 | 71.2 |
MS.gene91209.t1 | MTR_3g117485 | 35.461 | 141 | 62 | 5 | 123 | 237 | 192 | 329 | 6.79e-14 | 70.9 |
MS.gene91209.t1 | MTR_4g087130 | 36.634 | 101 | 54 | 2 | 164 | 254 | 235 | 335 | 6.86e-14 | 70.9 |
MS.gene91209.t1 | MTR_4g087090 | 36.000 | 100 | 54 | 2 | 164 | 253 | 235 | 334 | 7.02e-14 | 70.9 |
MS.gene91209.t1 | MTR_1g070110 | 38.710 | 93 | 49 | 1 | 164 | 248 | 126 | 218 | 7.74e-14 | 69.3 |
MS.gene91209.t1 | MTR_1g070100 | 39.326 | 89 | 46 | 1 | 163 | 243 | 148 | 236 | 1.15e-13 | 69.3 |
MS.gene91209.t1 | MTR_3g083370 | 37.624 | 101 | 54 | 2 | 164 | 256 | 194 | 293 | 1.20e-13 | 69.7 |
MS.gene91209.t1 | MTR_4g074130 | 40.449 | 89 | 39 | 2 | 164 | 244 | 232 | 314 | 1.26e-13 | 70.1 |
MS.gene91209.t1 | MTR_1g034060 | 40.659 | 91 | 44 | 2 | 164 | 244 | 238 | 328 | 1.29e-13 | 70.1 |
MS.gene91209.t1 | MTR_1g034120 | 36.634 | 101 | 54 | 2 | 154 | 244 | 228 | 328 | 1.45e-13 | 70.1 |
MS.gene91209.t1 | MTR_2g069090 | 34.545 | 110 | 60 | 3 | 164 | 261 | 261 | 370 | 1.77e-13 | 69.7 |
MS.gene91209.t1 | MTR_8g009160 | 31.776 | 107 | 62 | 2 | 164 | 259 | 253 | 359 | 1.94e-13 | 69.7 |
MS.gene91209.t1 | MTR_3g091360 | 35.185 | 108 | 61 | 2 | 164 | 263 | 247 | 353 | 2.15e-13 | 69.3 |
MS.gene91209.t1 | MTR_2g069210 | 35.185 | 108 | 59 | 3 | 164 | 260 | 256 | 363 | 2.26e-13 | 69.3 |
MS.gene91209.t1 | MTR_3g026150 | 31.783 | 129 | 64 | 3 | 14 | 120 | 21 | 147 | 2.64e-13 | 68.6 |
MS.gene91209.t1 | MTR_4g087100 | 28.659 | 164 | 90 | 4 | 120 | 258 | 179 | 340 | 2.89e-13 | 68.9 |
MS.gene91209.t1 | MTR_8g009120 | 33.645 | 107 | 60 | 2 | 164 | 259 | 242 | 348 | 3.30e-13 | 68.9 |
MS.gene91209.t1 | MTR_2g083030 | 37.500 | 96 | 46 | 2 | 164 | 251 | 228 | 317 | 3.58e-13 | 68.6 |
MS.gene91209.t1 | MTR_8g009150 | 32.143 | 112 | 65 | 2 | 163 | 263 | 233 | 344 | 3.87e-13 | 68.6 |
MS.gene91209.t1 | MTR_4g116010 | 42.697 | 89 | 42 | 2 | 164 | 243 | 242 | 330 | 4.10e-13 | 68.6 |
MS.gene91209.t1 | MTR_8g009170 | 35.000 | 100 | 54 | 2 | 164 | 252 | 254 | 353 | 4.21e-13 | 68.6 |
MS.gene91209.t1 | MTR_2g072930 | 32.308 | 130 | 62 | 4 | 14 | 120 | 14 | 140 | 4.49e-13 | 66.2 |
MS.gene91209.t1 | MTR_1g070120 | 35.484 | 93 | 52 | 1 | 164 | 248 | 231 | 323 | 5.97e-13 | 68.2 |
MS.gene91209.t1 | MTR_4g024660 | 31.818 | 110 | 61 | 2 | 164 | 259 | 259 | 368 | 7.26e-13 | 68.2 |
MS.gene91209.t1 | MTR_8g028435 | 31.776 | 107 | 62 | 2 | 164 | 259 | 253 | 359 | 9.96e-13 | 67.4 |
MS.gene91209.t1 | MTR_5g065010 | 29.825 | 171 | 90 | 6 | 120 | 263 | 174 | 341 | 1.11e-12 | 67.4 |
MS.gene91209.t1 | MTR_3g091350 | 34.259 | 108 | 62 | 2 | 164 | 263 | 254 | 360 | 1.15e-12 | 67.4 |
MS.gene91209.t1 | MTR_7g102820 | 31.429 | 105 | 64 | 1 | 164 | 260 | 272 | 376 | 1.85e-12 | 67.0 |
MS.gene91209.t1 | MTR_5g085330 | 35.577 | 104 | 56 | 2 | 164 | 256 | 195 | 298 | 2.52e-12 | 66.2 |
MS.gene91209.t1 | MTR_7g102720 | 31.313 | 99 | 60 | 1 | 173 | 263 | 236 | 334 | 3.21e-12 | 65.9 |
MS.gene91209.t1 | MTR_3g088565 | 34.653 | 101 | 55 | 2 | 164 | 253 | 195 | 295 | 3.37e-12 | 65.5 |
MS.gene91209.t1 | MTR_2g069010 | 34.286 | 105 | 54 | 2 | 164 | 253 | 261 | 365 | 3.45e-12 | 65.9 |
MS.gene91209.t1 | MTR_4g117880 | 36.559 | 93 | 48 | 2 | 164 | 245 | 254 | 346 | 3.51e-12 | 65.9 |
MS.gene91209.t1 | MTR_1g070135 | 33.333 | 93 | 54 | 1 | 164 | 248 | 231 | 323 | 3.75e-12 | 65.9 |
MS.gene91209.t1 | MTR_2g068840 | 34.000 | 100 | 58 | 1 | 172 | 263 | 261 | 360 | 5.13e-12 | 65.5 |
MS.gene91209.t1 | MTR_7g016080 | 39.506 | 81 | 49 | 0 | 163 | 243 | 231 | 311 | 5.77e-12 | 65.1 |
MS.gene91209.t1 | MTR_8g041600 | 34.821 | 112 | 61 | 2 | 164 | 263 | 262 | 373 | 5.94e-12 | 65.5 |
MS.gene91209.t1 | MTR_1g070080 | 36.559 | 93 | 51 | 1 | 164 | 248 | 231 | 323 | 8.77e-12 | 64.7 |
MS.gene91209.t1 | MTR_4g132770 | 35.789 | 95 | 51 | 2 | 164 | 248 | 64 | 158 | 9.54e-12 | 62.0 |
MS.gene91209.t1 | MTR_2g083000 | 31.818 | 110 | 57 | 3 | 164 | 263 | 223 | 324 | 9.89e-12 | 64.3 |
MS.gene91209.t1 | MTR_8g063070 | 30.000 | 110 | 63 | 2 | 164 | 259 | 259 | 368 | 1.19e-11 | 64.3 |
MS.gene91209.t1 | MTR_5g005570 | 38.043 | 92 | 43 | 3 | 164 | 247 | 227 | 312 | 1.27e-11 | 64.3 |
MS.gene91209.t1 | MTR_0032s0040 | 33.333 | 108 | 60 | 3 | 164 | 259 | 261 | 368 | 1.43e-11 | 64.3 |
MS.gene91209.t1 | MTR_7g029655 | 32.432 | 111 | 59 | 4 | 164 | 259 | 256 | 365 | 2.56e-11 | 63.5 |
MS.gene91209.t1 | MTR_3g088745 | 23.154 | 298 | 129 | 9 | 51 | 248 | 37 | 334 | 3.05e-11 | 63.2 |
MS.gene91209.t1 | MTR_8g461330 | 32.110 | 109 | 65 | 2 | 164 | 263 | 224 | 332 | 3.27e-11 | 62.8 |
MS.gene91209.t1 | MTR_2g069060 | 35.106 | 94 | 52 | 2 | 164 | 248 | 241 | 334 | 4.54e-11 | 62.8 |
MS.gene91209.t1 | MTR_3g043900 | 30.693 | 101 | 62 | 1 | 171 | 263 | 252 | 352 | 5.39e-11 | 62.4 |
MS.gene91209.t1 | MTR_4g087120 | 27.160 | 162 | 91 | 4 | 120 | 256 | 179 | 338 | 6.22e-11 | 62.4 |
MS.gene91209.t1 | MTR_2g068950 | 33.333 | 99 | 51 | 2 | 164 | 247 | 255 | 353 | 8.46e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91209.t1 | AT3G21420 | 46.006 | 363 | 94 | 8 | 1 | 263 | 1 | 361 | 8.20e-97 | 288 |
MS.gene91209.t1 | AT4G25310 | 30.868 | 311 | 149 | 10 | 17 | 263 | 16 | 324 | 2.25e-34 | 126 |
MS.gene91209.t1 | AT1G78550 | 28.788 | 330 | 140 | 10 | 27 | 263 | 28 | 355 | 9.09e-34 | 125 |
MS.gene91209.t1 | AT1G17020 | 28.986 | 345 | 143 | 11 | 17 | 263 | 17 | 357 | 2.73e-33 | 124 |
MS.gene91209.t1 | AT4G25310 | 28.070 | 342 | 152 | 11 | 14 | 263 | 13 | 352 | 5.28e-30 | 115 |
MS.gene91209.t1 | AT1G17010 | 29.014 | 355 | 151 | 12 | 5 | 263 | 8 | 357 | 5.42e-28 | 110 |
MS.gene91209.t1 | AT5G05600 | 25.074 | 339 | 151 | 10 | 17 | 256 | 27 | 361 | 3.01e-26 | 105 |
MS.gene91209.t1 | AT1G78550 | 29.167 | 264 | 113 | 8 | 70 | 263 | 18 | 277 | 1.54e-25 | 102 |
MS.gene91209.t1 | AT2G38240 | 25.291 | 344 | 155 | 9 | 14 | 260 | 9 | 347 | 3.69e-24 | 99.8 |
MS.gene91209.t1 | AT3G55970 | 23.837 | 344 | 162 | 8 | 17 | 260 | 14 | 357 | 1.23e-22 | 95.9 |
MS.gene91209.t1 | AT3G11180 | 23.977 | 342 | 151 | 10 | 17 | 256 | 56 | 390 | 4.87e-20 | 89.0 |
MS.gene91209.t1 | AT4G25300 | 40.741 | 108 | 56 | 1 | 164 | 263 | 154 | 261 | 1.30e-19 | 85.9 |
MS.gene91209.t1 | AT3G11180 | 24.128 | 344 | 149 | 11 | 17 | 258 | 56 | 389 | 1.72e-19 | 87.4 |
MS.gene91209.t1 | AT4G25300 | 40.741 | 108 | 56 | 1 | 164 | 263 | 248 | 355 | 2.91e-19 | 86.3 |
MS.gene91209.t1 | AT1G77330 | 41.584 | 101 | 51 | 1 | 164 | 256 | 197 | 297 | 1.34e-18 | 84.0 |
MS.gene91209.t1 | AT4G10500 | 42.453 | 106 | 52 | 2 | 164 | 260 | 237 | 342 | 2.78e-18 | 83.6 |
MS.gene91209.t1 | AT4G10490 | 33.645 | 107 | 61 | 2 | 164 | 260 | 235 | 341 | 6.26e-17 | 79.7 |
MS.gene91209.t1 | AT5G20400 | 24.699 | 332 | 149 | 9 | 28 | 262 | 19 | 346 | 1.58e-16 | 78.6 |
MS.gene91209.t1 | AT3G19010 | 41.667 | 108 | 50 | 3 | 164 | 261 | 203 | 307 | 5.15e-16 | 76.6 |
MS.gene91209.t1 | AT3G19010 | 42.056 | 107 | 49 | 3 | 164 | 260 | 233 | 336 | 5.62e-16 | 77.0 |
MS.gene91209.t1 | AT3G19010 | 42.056 | 107 | 49 | 3 | 164 | 260 | 233 | 336 | 5.62e-16 | 77.0 |
MS.gene91209.t1 | AT5G59530 | 38.739 | 111 | 57 | 2 | 164 | 263 | 253 | 363 | 8.58e-16 | 76.6 |
MS.gene91209.t1 | AT1G04380 | 37.838 | 111 | 58 | 2 | 164 | 263 | 234 | 344 | 1.50e-15 | 75.9 |
MS.gene91209.t1 | AT1G12010 | 38.614 | 101 | 52 | 2 | 164 | 256 | 197 | 295 | 1.88e-15 | 75.1 |
MS.gene91209.t1 | AT5G59540 | 39.640 | 111 | 56 | 2 | 164 | 263 | 255 | 365 | 1.97e-15 | 75.5 |
MS.gene91209.t1 | AT1G55290 | 36.697 | 109 | 59 | 2 | 164 | 262 | 251 | 359 | 2.25e-15 | 75.5 |
MS.gene91209.t1 | AT2G30840 | 40.000 | 105 | 55 | 5 | 164 | 261 | 251 | 354 | 1.15e-14 | 73.2 |
MS.gene91209.t1 | AT1G49390 | 25.240 | 313 | 125 | 11 | 49 | 262 | 44 | 346 | 1.43e-14 | 72.8 |
MS.gene91209.t1 | AT1G49390 | 25.362 | 276 | 120 | 9 | 61 | 262 | 4 | 267 | 3.98e-14 | 70.9 |
MS.gene91209.t1 | AT2G30840 | 37.838 | 111 | 55 | 5 | 164 | 261 | 251 | 360 | 7.29e-14 | 70.9 |
MS.gene91209.t1 | AT1G62380 | 35.644 | 101 | 55 | 2 | 164 | 256 | 197 | 295 | 8.41e-14 | 70.5 |
MS.gene91209.t1 | AT1G06620 | 33.929 | 112 | 61 | 3 | 164 | 263 | 254 | 364 | 1.48e-13 | 70.1 |
MS.gene91209.t1 | AT4G16330 | 35.238 | 105 | 56 | 2 | 164 | 260 | 154 | 254 | 1.58e-13 | 68.9 |
MS.gene91209.t1 | AT1G04350 | 37.037 | 108 | 56 | 3 | 164 | 259 | 248 | 355 | 2.04e-13 | 69.7 |
MS.gene91209.t1 | AT4G16330 | 35.238 | 105 | 56 | 2 | 164 | 260 | 260 | 360 | 3.20e-13 | 68.9 |
MS.gene91209.t1 | AT2G30830 | 36.111 | 108 | 56 | 4 | 164 | 259 | 247 | 353 | 3.56e-13 | 68.9 |
MS.gene91209.t1 | AT3G12900 | 35.780 | 109 | 61 | 2 | 164 | 263 | 247 | 355 | 5.65e-13 | 68.2 |
MS.gene91209.t1 | AT2G25450 | 39.474 | 114 | 53 | 5 | 164 | 263 | 247 | 358 | 6.32e-13 | 68.2 |
MS.gene91209.t1 | AT5G54000 | 25.000 | 288 | 118 | 8 | 69 | 262 | 64 | 347 | 8.19e-13 | 67.8 |
MS.gene91209.t1 | AT5G54000 | 25.820 | 244 | 104 | 7 | 92 | 262 | 28 | 267 | 1.63e-12 | 66.2 |
MS.gene91209.t1 | AT5G43450 | 32.710 | 107 | 61 | 2 | 164 | 259 | 251 | 357 | 2.27e-12 | 66.6 |
MS.gene91209.t1 | AT5G43440 | 34.821 | 112 | 60 | 3 | 164 | 263 | 254 | 364 | 2.33e-12 | 66.6 |
MS.gene91209.t1 | AT3G19000 | 40.206 | 97 | 48 | 2 | 158 | 244 | 232 | 328 | 4.10e-12 | 65.9 |
MS.gene91209.t1 | AT5G24530 | 31.765 | 170 | 83 | 7 | 120 | 260 | 171 | 336 | 5.15e-12 | 65.5 |
MS.gene91209.t1 | AT3G13610 | 30.909 | 110 | 66 | 2 | 164 | 263 | 251 | 360 | 2.41e-11 | 63.5 |
MS.gene91209.t1 | AT1G03410 | 34.951 | 103 | 53 | 4 | 164 | 253 | 250 | 351 | 2.74e-11 | 63.5 |
MS.gene91209.t1 | AT1G03410 | 34.951 | 103 | 53 | 4 | 164 | 253 | 287 | 388 | 2.75e-11 | 63.5 |
MS.gene91209.t1 | AT5G08640 | 36.735 | 98 | 53 | 2 | 164 | 253 | 237 | 333 | 3.78e-11 | 62.8 |
MS.gene91209.t1 | AT5G08640 | 36.735 | 98 | 53 | 2 | 164 | 253 | 237 | 333 | 3.78e-11 | 62.8 |
MS.gene91209.t1 | AT1G05010 | 33.962 | 106 | 57 | 3 | 164 | 256 | 194 | 299 | 9.87e-11 | 61.6 |
Find 52 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGACCCATTTGTTGTCTTTA+AGG | 0.122767 | 2.2:+52011764 | None:intergenic |
AATCTTTGAGGAACTGTCTT+TGG | 0.265374 | 2.2:+52013002 | None:intergenic |
CCATAACCTTGGACAGTTCC+TGG | 0.282406 | 2.2:+52012306 | None:intergenic |
GTTGGATAGTAATTCATCTA+TGG | 0.324658 | 2.2:+52011888 | None:intergenic |
GCATTTGGAATTGGTTCAAT+AGG | 0.325952 | 2.2:+52011742 | None:intergenic |
CCAGGAACTGTCCAAGGTTA+TGG | 0.344847 | 2.2:-52012306 | MS.gene91209:CDS |
AAATCCTTAAAGACAACAAA+TGG | 0.349073 | 2.2:-52011768 | MS.gene91209:CDS |
CATAGCATTAGGTCTGAGTT+TGG | 0.349146 | 2.2:-52011953 | MS.gene91209:intron |
ATAACAAGAGCATTTGGAAT+TGG | 0.381642 | 2.2:+52011733 | None:intergenic |
CCTACATTAATGCTAGAAAT+AGG | 0.392670 | 2.2:+52013062 | None:intergenic |
ATTTCTCTAAGTTTAGTAAA+GGG | 0.401195 | 2.2:-52012914 | MS.gene91209:CDS |
CATTTGGAATTGGTTCAATA+GGG | 0.427746 | 2.2:+52011743 | None:intergenic |
TCACTGTGCTGCAGCAGCTA+AGG | 0.440862 | 2.2:-52011809 | MS.gene91209:CDS |
ATTTCTATCTTGCAAAGTCC+AGG | 0.448164 | 2.2:+52011023 | None:intergenic |
ATGTTGATAACAAGAGCATT+TGG | 0.457793 | 2.2:+52011727 | None:intergenic |
ATGTCTCTTACAAATCTTTG+AGG | 0.459201 | 2.2:+52012990 | None:intergenic |
TGCAACTGCTTGTGAGGAGT+GGG | 0.474417 | 2.2:-52012856 | MS.gene91209:CDS |
GATTTCTCTAAGTTTAGTAA+AGG | 0.477237 | 2.2:-52012915 | MS.gene91209:CDS |
TGGACAGTTCCTGGAGCCAT+AGG | 0.477708 | 2.2:+52012315 | None:intergenic |
AATGCTCTTGTTATCAACAT+TGG | 0.480182 | 2.2:-52011724 | MS.gene91209:CDS |
TGGACCAATGCTTGAACTTG+TGG | 0.483380 | 2.2:-52011134 | MS.gene91209:CDS |
CCTAGCTATGAAGTAGAGCT+TGG | 0.487986 | 2.2:-52011154 | MS.gene91209:CDS |
CAAAAGCTTGTCCATAACCT+TGG | 0.501687 | 2.2:+52012295 | None:intergenic |
CCTATTTCTAGCATTAATGT+AGG | 0.505066 | 2.2:-52013062 | MS.gene91209:CDS |
CAAAAGTACCCTATGGCTCC+AGG | 0.508802 | 2.2:-52012324 | MS.gene91209:CDS |
CACTGTGCTGCAGCAGCTAA+GGG | 0.511896 | 2.2:-52011808 | MS.gene91209:CDS |
TTAAGGATTTGAAGACCCAC+TGG | 0.512276 | 2.2:+52011781 | None:intergenic |
CCAAGCTCTACTTCATAGCT+AGG | 0.515412 | 2.2:+52011154 | None:intergenic |
TCATCCACAAGTTCAAGCAT+TGG | 0.522900 | 2.2:+52011130 | None:intergenic |
CAAATAAGTTACAAGGAAAG+AGG | 0.529031 | 2.2:-52011048 | MS.gene91209:CDS |
TAGCTGCTGCAGCACAGTGA+GGG | 0.535015 | 2.2:+52011812 | None:intergenic |
AATCCTTAAAGACAACAAAT+GGG | 0.549367 | 2.2:-52011767 | MS.gene91209:CDS |
TAAGCTTGCAACTGCTTGTG+AGG | 0.554021 | 2.2:-52012862 | MS.gene91209:CDS |
GGACAGTTCCTGGAGCCATA+GGG | 0.570669 | 2.2:+52012316 | None:intergenic |
GCAGCTAAGGGAAGCCCAGT+GGG | 0.571564 | 2.2:-52011796 | MS.gene91209:CDS |
GCATAGAGCTGTGGCACATG+AGG | 0.573830 | 2.2:-52011212 | MS.gene91209:CDS |
AGAAATAGGTACAGGAGCCA+TGG | 0.574113 | 2.2:+52013076 | None:intergenic |
TTAATGCTAGAAATAGGTAC+AGG | 0.576227 | 2.2:+52013068 | None:intergenic |
GCAACTGCTTGTGAGGAGTG+GGG | 0.576394 | 2.2:-52012855 | MS.gene91209:CDS |
TTGCAACTGCTTGTGAGGAG+TGG | 0.578464 | 2.2:-52012857 | MS.gene91209:CDS |
TTAGCTGCTGCAGCACAGTG+AGG | 0.584460 | 2.2:+52011811 | None:intergenic |
ATGGCTCCAGGAACTGTCCA+AGG | 0.591027 | 2.2:-52012312 | MS.gene91209:CDS |
TTTCTATCTTGCAAAGTCCA+GGG | 0.597289 | 2.2:+52011024 | None:intergenic |
AAGAGAGCAAAAGTACCCTA+TGG | 0.599235 | 2.2:-52012331 | MS.gene91209:CDS |
TATGTAACAAATAAGTTACA+AGG | 0.599251 | 2.2:-52011055 | MS.gene91209:CDS |
AACTTAGAGAAATCAATGAC+AGG | 0.605130 | 2.2:+52012924 | None:intergenic |
AAGTATAAAAGATACAATCA+TGG | 0.612751 | 2.2:-52011094 | MS.gene91209:CDS |
TAAGGATTTGAAGACCCACT+GGG | 0.617052 | 2.2:+52011782 | None:intergenic |
GTTTAGTAAAGGGAACAAAG+AGG | 0.627457 | 2.2:-52012904 | MS.gene91209:CDS |
GAGTGTGGAGCATAGAGCTG+TGG | 0.642957 | 2.2:-52011221 | MS.gene91209:CDS |
AGCAGCTAAGGGAAGCCCAG+TGG | 0.657033 | 2.2:-52011797 | MS.gene91209:CDS |
GTTACAAGGAAAGAGGACCC+TGG | 0.686635 | 2.2:-52011041 | MS.gene91209:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAAAAATTAATTGAAG+AGG | + | chr2.2:52012436-52012455 | None:intergenic | 10.0% |
!! | TTAAAAAAATTAATTGAAGA+GGG | + | chr2.2:52012435-52012454 | None:intergenic | 10.0% |
!!! | TATTATTTTATAATTTGGTA+AGG | - | chr2.2:52011305-52011324 | MS.gene91209:intron | 10.0% |
!! | TTTACCAAGTAAATAATAAA+AGG | + | chr2.2:52012040-52012059 | None:intergenic | 15.0% |
!!! | ATTGATAAAATTTGTTAGAA+AGG | - | chr2.2:52012000-52012019 | MS.gene91209:intron | 15.0% |
!!! | CAAATTTTATCAATTTTGTA+TGG | + | chr2.2:52011994-52012013 | None:intergenic | 15.0% |
!!! | GCTACTATTATTTTATAATT+TGG | - | chr2.2:52011300-52011319 | MS.gene91209:intron | 15.0% |
!!! | TAATCCTTTTATTATTTACT+TGG | - | chr2.2:52012033-52012052 | MS.gene91209:intron | 15.0% |
!!! | TCATTTTCTCAAATTATAAT+AGG | + | chr2.2:52012533-52012552 | None:intergenic | 15.0% |
!!! | TTAATTTTTCATTTTTCTCT+TGG | - | chr2.2:52012809-52012828 | MS.gene91209:intron | 15.0% |
!! | AAGTATAAAAGATACAATCA+TGG | - | chr2.2:52013007-52013026 | MS.gene91209:CDS | 20.0% |
!! | AATTGTACTCAAGAAAAATA+AGG | - | chr2.2:52012098-52012117 | MS.gene91209:intron | 20.0% |
!! | ATTAAGTTATTTATCGAAAC+AGG | + | chr2.2:52011346-52011365 | None:intergenic | 20.0% |
!! | ATTTCTCTAAGTTTAGTAAA+GGG | - | chr2.2:52011187-52011206 | MS.gene91209:CDS | 20.0% |
!! | TATGTAACAAATAAGTTACA+AGG | - | chr2.2:52013046-52013065 | MS.gene91209:CDS | 20.0% |
!! | TGAAAAAGTTAACCATATAT+AGG | + | chr2.2:52011591-52011610 | None:intergenic | 20.0% |
!!! | TAACTTTTTCAAGAAAAACT+TGG | - | chr2.2:52011600-52011619 | MS.gene91209:intron | 20.0% |
!!! | TATGTATTTCAGCAAATTTT+TGG | + | chr2.2:52012132-52012151 | None:intergenic | 20.0% |
! | AAATCCTTAAAGACAACAAA+TGG | - | chr2.2:52012333-52012352 | MS.gene91209:CDS | 25.0% |
! | AATCCTTAAAGACAACAAAT+GGG | - | chr2.2:52012334-52012353 | MS.gene91209:CDS | 25.0% |
! | ATATTAGGAACTCAAATCTT+TGG | - | chr2.2:52011891-52011910 | MS.gene91209:CDS | 25.0% |
! | ATTAAATCACTATGCACAAA+AGG | + | chr2.2:52012794-52012813 | None:intergenic | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | - | chr2.2:52012619-52012638 | MS.gene91209:intron | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | + | chr2.2:52012638-52012619 | None:intergenic | 25.0% |
! | GATTTCTCTAAGTTTAGTAA+AGG | - | chr2.2:52011186-52011205 | MS.gene91209:CDS | 25.0% |
! | TTGGTAAGCTTATGAAAATA+AGG | - | chr2.2:52011460-52011479 | MS.gene91209:intron | 25.0% |
!! | AAGTTTCTTACATTTAAGAC+CGG | + | chr2.2:52012584-52012603 | None:intergenic | 25.0% |
!! | AGTTGTTTCCATAAATTCTT+CGG | - | chr2.2:52011508-52011527 | MS.gene91209:intron | 25.0% |
!! | ATTTTACAGGTTCTTACAAA+TGG | - | chr2.2:52012848-52012867 | MS.gene91209:CDS | 25.0% |
!! | TAATGTTAAGTGTTGTCATT+AGG | - | chr2.2:52011670-52011689 | MS.gene91209:intron | 25.0% |
!! | TGATTCTTTTTGCATTTTAC+AGG | - | chr2.2:52012835-52012854 | MS.gene91209:intron | 25.0% |
!! | TGTATCTTTTATACTTGCAT+GGG | + | chr2.2:52013003-52013022 | None:intergenic | 25.0% |
!! | TTGTATCTTTTATACTTGCA+TGG | + | chr2.2:52013004-52013023 | None:intergenic | 25.0% |
AAATGGAAAATACAAGAGTG+TGG | - | chr2.2:52012865-52012884 | MS.gene91209:CDS | 30.0% | |
AACTTAGAGAAATCAATGAC+AGG | + | chr2.2:52011180-52011199 | None:intergenic | 30.0% | |
AGAACATAGAAGATATGAGT+AGG | - | chr2.2:52011726-52011745 | MS.gene91209:CDS | 30.0% | |
ATATCAAGCAGTCCTATATA+TGG | - | chr2.2:52011576-52011595 | MS.gene91209:intron | 30.0% | |
ATGTCTCTTACAAATCTTTG+AGG | + | chr2.2:52011114-52011133 | None:intergenic | 30.0% | |
CAAATAAGTTACAAGGAAAG+AGG | - | chr2.2:52013053-52013072 | MS.gene91209:CDS | 30.0% | |
CCTACATTAATGCTAGAAAT+AGG | + | chr2.2:52011042-52011061 | None:intergenic | 30.0% | |
GAACATAGAAGATATGAGTA+GGG | - | chr2.2:52011727-52011746 | MS.gene91209:CDS | 30.0% | |
GAATTGAACCTCACTATATT+AGG | - | chr2.2:52011876-52011895 | MS.gene91209:intron | 30.0% | |
GTTGGATAGTAATTCATCTA+TGG | + | chr2.2:52012216-52012235 | None:intergenic | 30.0% | |
TAACGTTACGTATATCATCT+AGG | - | chr2.2:52011949-52011968 | MS.gene91209:CDS | 30.0% | |
TTAATGCTAGAAATAGGTAC+AGG | + | chr2.2:52011036-52011055 | None:intergenic | 30.0% | |
TTGCTGAAATACATAGCATT+AGG | - | chr2.2:52012137-52012156 | MS.gene91209:intron | 30.0% | |
! | AATGCTCTTGTTATCAACAT+TGG | - | chr2.2:52012377-52012396 | MS.gene91209:intron | 30.0% |
! | AGTTTCTTTACATTTGAGAC+AGG | - | chr2.2:52012694-52012713 | MS.gene91209:intron | 30.0% |
! | CATTTGGAATTGGTTCAATA+GGG | + | chr2.2:52012361-52012380 | None:intergenic | 30.0% |
! | TTTGAGTTCCTAATATAGTG+AGG | + | chr2.2:52011887-52011906 | None:intergenic | 30.0% |
!! | ATAACAAGAGCATTTGGAAT+TGG | + | chr2.2:52012371-52012390 | None:intergenic | 30.0% |
!! | ATGTTGATAACAAGAGCATT+TGG | + | chr2.2:52012377-52012396 | None:intergenic | 30.0% |
!! | CCTATTTCTAGCATTAATGT+AGG | - | chr2.2:52011039-52011058 | MS.gene91209:CDS | 30.0% |
!! | GATGTTTTTGAGAAGATGTT+TGG | - | chr2.2:52012176-52012195 | MS.gene91209:intron | 30.0% |
AATAGGTGTCAACAATGTCT+TGG | + | chr2.2:52012516-52012535 | None:intergenic | 35.0% | |
ATATAATCACATACTCCCTC+CGG | - | chr2.2:52012562-52012581 | MS.gene91209:intron | 35.0% | |
CTATGTTCTCCATCAGATTA+AGG | + | chr2.2:52011715-52011734 | None:intergenic | 35.0% | |
GTTTAGTAAAGGGAACAAAG+AGG | - | chr2.2:52011197-52011216 | MS.gene91209:CDS | 35.0% | |
TATAGTGAGGTTCAATTCCT+AGG | + | chr2.2:52011874-52011893 | None:intergenic | 35.0% | |
TGAGATTGACCTTAATCTGA+TGG | - | chr2.2:52011703-52011722 | MS.gene91209:intron | 35.0% | |
TTTGAAGACATGCTGTTCAT+TGG | - | chr2.2:52011641-52011660 | MS.gene91209:intron | 35.0% | |
! | AATCTTTGAGGAACTGTCTT+TGG | + | chr2.2:52011102-52011121 | None:intergenic | 35.0% |
! | ATCTTTTATACTTGCATGGG+TGG | + | chr2.2:52013000-52013019 | None:intergenic | 35.0% |
! | GCATTTGGAATTGGTTCAAT+AGG | + | chr2.2:52012362-52012381 | None:intergenic | 35.0% |
! | TCTTTACATTTGAGACAGGA+GGG | - | chr2.2:52012698-52012717 | MS.gene91209:intron | 35.0% |
! | TGTTGCACCAATCAAGTTTT+TGG | + | chr2.2:52011845-52011864 | None:intergenic | 35.0% |
! | TTCTTACATTTAAGACCGGA+GGG | + | chr2.2:52012580-52012599 | None:intergenic | 35.0% |
! | TTCTTTACATTTGAGACAGG+AGG | - | chr2.2:52012697-52012716 | MS.gene91209:intron | 35.0% |
! | TTTCTTACATTTAAGACCGG+AGG | + | chr2.2:52012581-52012600 | None:intergenic | 35.0% |
!! | GCTGTTTTCATGAGCTATTT+TGG | - | chr2.2:52011441-52011460 | MS.gene91209:intron | 35.0% |
!!! | ACAAGCTTTTGTTTTCTCAG+AGG | - | chr2.2:52011818-52011837 | MS.gene91209:CDS | 35.0% |
AGACGGTTCCGAAGAATTTA+TGG | + | chr2.2:52011519-52011538 | None:intergenic | 40.0% | |
ATACATTACCTGAGTCTTGC+TGG | + | chr2.2:52011926-52011945 | None:intergenic | 40.0% | |
CAAAAGCTTGTCCATAACCT+TGG | + | chr2.2:52011809-52011828 | None:intergenic | 40.0% | |
CAGAGGACCAAAAACTTGAT+TGG | - | chr2.2:52011835-52011854 | MS.gene91209:intron | 40.0% | |
CATAGCATTAGGTCTGAGTT+TGG | - | chr2.2:52012148-52012167 | MS.gene91209:intron | 40.0% | |
TAAGGATTTGAAGACCCACT+GGG | + | chr2.2:52012322-52012341 | None:intergenic | 40.0% | |
TCATCCACAAGTTCAAGCAT+TGG | + | chr2.2:52012974-52012993 | None:intergenic | 40.0% | |
TTAAGGATTTGAAGACCCAC+TGG | + | chr2.2:52012323-52012342 | None:intergenic | 40.0% | |
TTCCATAAACACCTGTGAGA+CGG | + | chr2.2:52011536-52011555 | None:intergenic | 40.0% | |
! | GTACTTTTGCTCTCTTCCAA+AGG | + | chr2.2:52011766-52011785 | None:intergenic | 40.0% |
!! | AAGAGAGCAAAAGTACCCTA+TGG | - | chr2.2:52011770-52011789 | MS.gene91209:CDS | 40.0% |
!! | GGACCCATTTGTTGTCTTTA+AGG | + | chr2.2:52012340-52012359 | None:intergenic | 40.0% |
!! | TTCAAGACCTGACCTTGTTT+TGG | - | chr2.2:52012239-52012258 | MS.gene91209:intron | 40.0% |
!! | TTTTGTGGGGAAAGAAGTGT+TGG | + | chr2.2:52011147-52011166 | None:intergenic | 40.0% |
!!! | TCAAGACCTGACCTTGTTTT+GGG | - | chr2.2:52012240-52012259 | MS.gene91209:intron | 40.0% |
AACCGTCTCACAGGTGTTTA+TGG | - | chr2.2:52011531-52011550 | MS.gene91209:intron | 45.0% | |
AGGTCAGGTCTTGAACATGT+TGG | + | chr2.2:52012234-52012253 | None:intergenic | 45.0% | |
CCAAGCTCTACTTCATAGCT+AGG | + | chr2.2:52012950-52012969 | None:intergenic | 45.0% | |
CCTAGCTATGAAGTAGAGCT+TGG | - | chr2.2:52012947-52012966 | MS.gene91209:CDS | 45.0% | |
CTCAAACCCAAAACAAGGTC+AGG | + | chr2.2:52012249-52012268 | None:intergenic | 45.0% | |
GAGGACTCAAACCCAAAACA+AGG | + | chr2.2:52012254-52012273 | None:intergenic | 45.0% | |
GGTTTGAGTCCTCATTCAGA+TGG | - | chr2.2:52012261-52012280 | MS.gene91209:intron | 45.0% | |
TAAGCTTGCAACTGCTTGTG+AGG | - | chr2.2:52011239-52011258 | MS.gene91209:intron | 45.0% | |
TGGACCAATGCTTGAACTTG+TGG | - | chr2.2:52012967-52012986 | MS.gene91209:CDS | 45.0% | |
TGGCACATGAGGAAAAAGAC+AGG | - | chr2.2:52012900-52012919 | MS.gene91209:CDS | 45.0% | |
TGTCTCAGGTATGTCAGTGT+CGG | + | chr2.2:52012737-52012756 | None:intergenic | 45.0% | |
TTGGTGCAACATGTTTGCCT+AGG | - | chr2.2:52011854-52011873 | MS.gene91209:intron | 45.0% | |
! | ACAGGCATGTCACTGTTTTG+TGG | + | chr2.2:52011162-52011181 | None:intergenic | 45.0% |
! | AGGCATGTCACTGTTTTGTG+GGG | + | chr2.2:52011160-52011179 | None:intergenic | 45.0% |
! | CAGGCATGTCACTGTTTTGT+GGG | + | chr2.2:52011161-52011180 | None:intergenic | 45.0% |
! | CTATGTGATGAGAGCGTGTT+CGG | + | chr2.2:52012760-52012779 | None:intergenic | 45.0% |
! | GGGAGTTTTCATGCTACCTT+TGG | - | chr2.2:52011747-52011766 | MS.gene91209:CDS | 45.0% |
ATTCTTCGGAACCGTCTCAC+AGG | - | chr2.2:52011522-52011541 | MS.gene91209:intron | 50.0% | |
CAAAGAAGCCAGCAAGACTC+AGG | - | chr2.2:52011915-52011934 | MS.gene91209:CDS | 50.0% | |
CCAGGAACTGTCCAAGGTTA+TGG | - | chr2.2:52011795-52011814 | MS.gene91209:CDS | 50.0% | |
CCATAACCTTGGACAGTTCC+TGG | + | chr2.2:52011798-52011817 | None:intergenic | 50.0% | |
GTTACAAGGAAAGAGGACCC+TGG | - | chr2.2:52013060-52013079 | MS.gene91209:CDS | 50.0% | |
TGCAACTGCTTGTGAGGAGT+GGG | - | chr2.2:52011245-52011264 | MS.gene91209:intron | 50.0% | |
TTGCAACTGCTTGTGAGGAG+TGG | - | chr2.2:52011244-52011263 | MS.gene91209:intron | 50.0% | |
! | AGGGCACTTCCATCTGAATG+AGG | + | chr2.2:52012273-52012292 | None:intergenic | 50.0% |
! | GGTCTGTGTCGATGCTTCAT+AGG | + | chr2.2:52012474-52012493 | None:intergenic | 50.0% |
! | GTGAGGAGTGGGGATTTTTC+AGG | - | chr2.2:52011256-52011275 | MS.gene91209:intron | 50.0% |
!! | CAAAAGTACCCTATGGCTCC+AGG | - | chr2.2:52011777-52011796 | MS.gene91209:CDS | 50.0% |
!! | CTGAGTCTTGCTGGCTTCTT+TGG | + | chr2.2:52011917-52011936 | None:intergenic | 50.0% |
ATGGCTCCAGGAACTGTCCA+AGG | - | chr2.2:52011789-52011808 | MS.gene91209:CDS | 55.0% | |
CACTGTGCTGCAGCAGCTAA+GGG | - | chr2.2:52012293-52012312 | MS.gene91209:CDS | 55.0% | |
GAGTGTGGAGCATAGAGCTG+TGG | - | chr2.2:52012880-52012899 | MS.gene91209:CDS | 55.0% | |
GCAACTGCTTGTGAGGAGTG+GGG | - | chr2.2:52011246-52011265 | MS.gene91209:intron | 55.0% | |
GCATAGAGCTGTGGCACATG+AGG | - | chr2.2:52012889-52012908 | MS.gene91209:CDS | 55.0% | |
GGACAGTTCCTGGAGCCATA+GGG | + | chr2.2:52011788-52011807 | None:intergenic | 55.0% | |
TAGCTGCTGCAGCACAGTGA+GGG | + | chr2.2:52012292-52012311 | None:intergenic | 55.0% | |
TCACTGTGCTGCAGCAGCTA+AGG | - | chr2.2:52012292-52012311 | MS.gene91209:CDS | 55.0% | |
TGGACAGTTCCTGGAGCCAT+AGG | + | chr2.2:52011789-52011808 | None:intergenic | 55.0% | |
TTAGCTGCTGCAGCACAGTG+AGG | + | chr2.2:52012293-52012312 | None:intergenic | 55.0% | |
! | CTTGGTGTGAGTGTCGTGTC+TGG | + | chr2.2:52012498-52012517 | None:intergenic | 55.0% |
AGCAGCTAAGGGAAGCCCAG+TGG | - | chr2.2:52012304-52012323 | MS.gene91209:CDS | 60.0% | |
GCAGCTAAGGGAAGCCCAGT+GGG | - | chr2.2:52012305-52012324 | MS.gene91209:CDS | 60.0% | |
! | GGTGTGAGTGTCGTGTCTGG+TGG | + | chr2.2:52012495-52012514 | None:intergenic | 60.0% |
!! | GAGAGCGTGTTCGGTGTCTC+AGG | + | chr2.2:52012751-52012770 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 52011027 | 52013096 | 52011027 | ID=MS.gene91209 |
chr2.2 | mRNA | 52011027 | 52013096 | 52011027 | ID=MS.gene91209.t1;Parent=MS.gene91209 |
chr2.2 | exon | 52012846 | 52013096 | 52012846 | ID=MS.gene91209.t1.exon1;Parent=MS.gene91209.t1 |
chr2.2 | CDS | 52012846 | 52013096 | 52012846 | ID=cds.MS.gene91209.t1;Parent=MS.gene91209.t1 |
chr2.2 | exon | 52012265 | 52012371 | 52012265 | ID=MS.gene91209.t1.exon2;Parent=MS.gene91209.t1 |
chr2.2 | CDS | 52012265 | 52012371 | 52012265 | ID=cds.MS.gene91209.t1;Parent=MS.gene91209.t1 |
chr2.2 | exon | 52011886 | 52011970 | 52011886 | ID=MS.gene91209.t1.exon3;Parent=MS.gene91209.t1 |
chr2.2 | CDS | 52011886 | 52011970 | 52011886 | ID=cds.MS.gene91209.t1;Parent=MS.gene91209.t1 |
chr2.2 | exon | 52011711 | 52011843 | 52011711 | ID=MS.gene91209.t1.exon4;Parent=MS.gene91209.t1 |
chr2.2 | CDS | 52011711 | 52011843 | 52011711 | ID=cds.MS.gene91209.t1;Parent=MS.gene91209.t1 |
chr2.2 | exon | 52011027 | 52011242 | 52011027 | ID=MS.gene91209.t1.exon5;Parent=MS.gene91209.t1 |
chr2.2 | CDS | 52011027 | 52011242 | 52011027 | ID=cds.MS.gene91209.t1;Parent=MS.gene91209.t1 |
Gene Sequence |
Protein sequence |