AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91506

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91506.t1 MTR_2g084585 99.148 352 2 1 1 351 1 352 0.0 708
MS.gene91506.t1 MTR_4g056280 61.111 342 133 0 9 350 10 351 8.66e-156 441
MS.gene91506.t1 MTR_2g100620 61.656 326 124 1 26 350 28 353 6.86e-149 424
MS.gene91506.t1 MTR_8g014910 62.385 327 122 1 26 351 29 355 1.12e-148 423
MS.gene91506.t1 MTR_4g056160 60.231 347 134 3 8 351 7 352 1.08e-144 413
MS.gene91506.t1 MTR_1108s0010 59.361 219 78 1 132 350 3 210 2.79e-92 275
MS.gene91506.t1 MTR_5g084750 42.216 334 189 2 12 343 13 344 1.97e-90 275
MS.gene91506.t1 MTR_1g025780 40.058 342 197 3 8 343 14 353 1.98e-88 270
MS.gene91506.t1 MTR_1g025760 40.230 348 195 5 6 343 50 394 2.61e-87 269
MS.gene91506.t1 MTR_5g084790 41.463 328 192 0 12 339 15 342 4.16e-87 266
MS.gene91506.t1 MTR_3g082830 42.236 322 186 0 27 348 36 357 1.11e-86 266
MS.gene91506.t1 MTR_8g075230 41.640 317 185 0 27 343 34 350 3.61e-86 264
MS.gene91506.t1 MTR_5g084770 42.006 319 182 2 27 343 26 343 6.14e-86 263
MS.gene91506.t1 MTR_3g464730 42.547 322 176 4 27 343 26 343 5.56e-83 256
MS.gene91506.t1 MTR_3g114090 39.432 317 190 2 28 343 35 350 1.46e-82 255
MS.gene91506.t1 MTR_3g114120 42.308 312 179 1 27 338 45 355 1.99e-82 255
MS.gene91506.t1 MTR_1g025700 39.595 346 198 3 8 343 19 363 3.40e-82 254
MS.gene91506.t1 MTR_1g025720 39.053 338 197 4 8 339 12 346 6.95e-81 251
MS.gene91506.t1 MTR_2g015080 39.941 338 190 7 8 334 17 352 1.38e-79 248
MS.gene91506.t1 MTR_5g074270 41.401 314 180 3 29 339 33 345 6.35e-79 246
MS.gene91506.t1 MTR_8g075200 37.647 340 208 1 8 343 16 355 4.42e-78 245
MS.gene91506.t1 MTR_8g075220 38.841 345 199 4 11 343 15 359 1.37e-77 243
MS.gene91506.t1 MTR_5g022630 40.764 314 184 2 27 338 41 354 1.47e-76 240
MS.gene91506.t1 MTR_5g022640 37.736 318 197 1 27 343 41 358 3.15e-75 236
MS.gene91506.t1 MTR_1g025680 38.081 344 203 5 3 338 2 343 4.46e-74 236
MS.gene91506.t1 MTR_4g087985 38.095 336 196 6 8 334 16 348 1.54e-73 232
MS.gene91506.t1 MTR_4g036375 61.628 172 64 1 7 176 6 177 1.03e-68 214
MS.gene91506.t1 MTR_1g025910 37.748 302 184 3 34 334 41 339 1.64e-64 209
MS.gene91506.t1 MTR_5g083040 36.364 319 194 4 27 338 30 346 2.55e-63 206
MS.gene91506.t1 MTR_3g052490 35.362 345 208 8 7 342 9 347 9.78e-63 204
MS.gene91506.t1 MTR_1g079530 35.897 351 209 8 7 350 3 344 2.41e-62 203
MS.gene91506.t1 MTR_0565s0010 34.593 344 215 7 1 339 4 342 3.55e-62 203
MS.gene91506.t1 MTR_7g116570 33.908 348 214 7 7 343 6 348 8.40e-62 202
MS.gene91506.t1 MTR_1g079540 35.484 341 213 6 7 344 10 346 5.20e-61 200
MS.gene91506.t1 MTR_7g116520 34.593 344 219 5 3 343 8 348 2.15e-60 198
MS.gene91506.t1 MTR_3g052580 34.957 349 207 11 3 342 5 342 1.05e-59 197
MS.gene91506.t1 MTR_1g069175 35.294 340 211 6 8 343 15 349 1.19e-59 196
MS.gene91506.t1 MTR_3g052580 34.957 349 207 11 3 342 4 341 1.74e-59 197
MS.gene91506.t1 MTR_5g078210 35.826 321 192 9 31 345 27 339 2.90e-59 195
MS.gene91506.t1 MTR_3g024510 34.132 334 213 6 9 339 18 347 3.51e-59 195
MS.gene91506.t1 MTR_8g087890 35.015 337 205 8 11 339 10 340 1.41e-58 193
MS.gene91506.t1 MTR_5g093090 34.694 343 207 9 10 343 10 344 5.60e-58 192
MS.gene91506.t1 MTR_5g009100 32.484 314 208 4 31 342 48 359 1.89e-57 191
MS.gene91506.t1 MTR_8g079050 32.773 357 224 6 1 343 4 358 2.33e-57 191
MS.gene91506.t1 MTR_7g116500 34.125 337 216 5 11 344 15 348 2.41e-57 190
MS.gene91506.t1 MTR_3g052480 34.384 349 203 12 10 342 11 349 7.59e-57 189
MS.gene91506.t1 MTR_7g008060 33.626 342 206 7 7 343 9 334 9.20e-57 188
MS.gene91506.t1 MTR_8g074570 32.857 350 219 8 9 351 22 362 1.71e-56 188
MS.gene91506.t1 MTR_1g024890 35.135 333 209 6 14 343 18 346 1.94e-56 188
MS.gene91506.t1 MTR_4g035353 34.311 341 215 7 4 339 5 341 4.90e-56 187
MS.gene91506.t1 MTR_4g019880 34.320 338 214 6 11 343 14 348 1.05e-55 186
MS.gene91506.t1 MTR_6g021530 33.623 345 221 7 4 343 3 344 1.13e-55 186
MS.gene91506.t1 MTR_3g005650 35.045 331 205 8 11 339 13 335 1.95e-55 185
MS.gene91506.t1 MTR_7g116510 33.136 338 219 5 9 343 7 340 2.08e-55 185
MS.gene91506.t1 MTR_3g435540 33.626 342 215 9 9 343 1 337 4.96e-55 184
MS.gene91506.t1 MTR_8g087870 34.857 350 197 9 1 340 1 329 5.11e-55 184
MS.gene91506.t1 MTR_4g122200 33.237 346 221 7 11 351 18 358 8.21e-55 184
MS.gene91506.t1 MTR_2g033920 32.919 322 207 7 27 343 33 350 1.80e-54 183
MS.gene91506.t1 MTR_4g108690 33.438 317 203 6 31 343 29 341 2.23e-54 182
MS.gene91506.t1 MTR_3g005660 35.127 353 211 11 1 339 1 349 4.21e-54 182
MS.gene91506.t1 MTR_3g098270 33.022 321 206 6 25 339 30 347 5.60e-54 182
MS.gene91506.t1 MTR_6g049230 60.156 128 51 0 197 324 67 194 1.99e-53 175
MS.gene91506.t1 MTR_3g021460 33.824 340 203 9 8 341 8 331 1.42e-51 175
MS.gene91506.t1 MTR_2g017925 34.483 348 185 11 11 339 9 332 1.96e-51 175
MS.gene91506.t1 MTR_2g033930 32.288 319 209 6 28 343 31 345 2.04e-51 175
MS.gene91506.t1 MTR_8g022810 33.125 320 203 5 29 342 41 355 2.24e-51 175
MS.gene91506.t1 MTR_2g017875 35.583 326 177 11 27 339 32 337 3.48e-51 174
MS.gene91506.t1 MTR_2g044100 34.545 330 202 7 29 350 43 366 3.86e-51 175
MS.gene91506.t1 MTR_2g017955 35.328 351 206 10 1 342 1 339 4.40e-51 174
MS.gene91506.t1 MTR_3g023220 34.568 324 189 11 21 339 25 330 8.88e-50 170
MS.gene91506.t1 MTR_4g036385 58.537 123 51 0 228 350 13 135 9.72e-49 160
MS.gene91506.t1 MTR_8g074580 29.146 398 224 7 7 350 15 408 3.46e-48 167
MS.gene91506.t1 MTR_4g056220 56.250 128 56 0 223 350 61 188 1.26e-47 160
MS.gene91506.t1 MTR_2g017965 34.659 352 202 14 1 339 1 337 3.41e-47 164
MS.gene91506.t1 MTR_8g022790 34.069 317 189 9 29 339 37 339 8.83e-47 162
MS.gene91506.t1 MTR_2g461580 32.710 321 196 8 24 340 26 330 1.11e-46 162
MS.gene91506.t1 MTR_6g049220 46.524 187 55 1 16 202 17 158 1.40e-46 156
MS.gene91506.t1 MTR_8g031420 31.014 345 214 10 8 340 10 342 3.31e-46 161
MS.gene91506.t1 MTR_8g031400 29.745 353 218 11 11 346 10 349 1.26e-44 157
MS.gene91506.t1 MTR_8g031430 29.609 358 220 12 1 340 1 344 1.08e-43 154
MS.gene91506.t1 MTR_8g074560 31.445 353 216 13 8 342 5 349 1.99e-42 151
MS.gene91506.t1 MTR_5g078210 33.588 262 166 6 31 288 27 284 4.51e-42 149
MS.gene91506.t1 MTR_8g031390 28.940 349 218 11 9 340 8 343 6.69e-42 150
MS.gene91506.t1 MTR_0009s0250 31.269 323 203 10 27 345 31 338 6.73e-42 149
MS.gene91506.t1 MTR_2g017915 33.236 343 185 13 1 333 1 309 1.31e-41 149
MS.gene91506.t1 MTR_5g093090 34.146 287 175 7 10 288 10 290 4.89e-41 146
MS.gene91506.t1 MTR_2g033920 31.203 266 176 5 27 288 33 295 8.94e-39 140
MS.gene91506.t1 MTR_8g031390 28.618 304 193 9 9 300 8 299 1.33e-34 129
MS.gene91506.t1 MTR_2g018015 41.053 190 104 6 27 211 34 220 2.15e-33 125
MS.gene91506.t1 MTR_7g033150 27.415 383 211 14 8 343 7 369 2.40e-33 127
MS.gene91506.t1 MTR_1g030268 30.769 338 201 11 28 342 39 366 3.76e-33 127
MS.gene91506.t1 MTR_5g087690 29.483 329 198 9 26 340 47 355 1.09e-32 125
MS.gene91506.t1 MTR_1g030275 31.563 339 199 11 28 343 38 366 1.78e-32 125
MS.gene91506.t1 MTR_8g022810 29.338 317 168 7 29 343 41 303 6.20e-32 122
MS.gene91506.t1 MTR_7g111780 30.838 334 200 13 30 348 37 354 8.91e-32 122
MS.gene91506.t1 MTR_5g074210 39.752 161 90 3 188 342 45 204 1.13e-31 119
MS.gene91506.t1 MTR_5g093090 38.860 193 107 6 10 194 10 199 8.33e-30 114
MS.gene91506.t1 MTR_1g079590 37.952 166 100 3 14 178 17 180 2.47e-29 112
MS.gene91506.t1 MTR_8g089805 29.810 369 209 14 10 343 19 372 2.47e-29 116
MS.gene91506.t1 MTR_7g033165 28.571 350 198 13 28 343 32 363 4.84e-29 115
MS.gene91506.t1 MTR_7g087190 28.977 352 207 11 28 348 42 381 5.57e-29 115
MS.gene91506.t1 MTR_7g116870 26.975 367 230 10 4 343 5 360 1.34e-28 114
MS.gene91506.t1 MTR_0127s0040 31.507 219 141 6 127 340 4 218 2.48e-28 110
MS.gene91506.t1 MTR_8g028160 28.571 350 207 9 29 348 36 372 2.52e-28 114
MS.gene91506.t1 MTR_1g030230 28.529 340 208 10 28 342 31 360 7.38e-28 112
MS.gene91506.t1 MTR_2g087292 27.746 346 161 10 7 344 4 268 2.64e-27 108
MS.gene91506.t1 MTR_7g033155 24.297 391 232 11 4 343 6 383 5.24e-27 110
MS.gene91506.t1 MTR_1g030220 27.139 339 212 11 29 342 40 368 2.99e-25 105
MS.gene91506.t1 MTR_6g007100 26.036 338 209 11 26 343 30 346 5.64e-25 104
MS.gene91506.t1 MTR_3g463960 27.729 339 210 10 29 343 44 371 1.10e-24 103
MS.gene91506.t1 MTR_3g463950 27.729 339 210 10 29 343 44 371 1.10e-24 103
MS.gene91506.t1 MTR_3g463970 27.729 339 210 10 29 343 44 371 1.10e-24 103
MS.gene91506.t1 MTR_3g463940 27.729 339 210 10 29 343 44 371 1.10e-24 103
MS.gene91506.t1 MTR_2g015580 29.204 339 204 15 29 343 47 373 1.21e-24 103
MS.gene91506.t1 MTR_8g038680 28.495 372 225 15 7 348 2 362 1.80e-24 103
MS.gene91506.t1 MTR_1g030340 26.923 390 218 17 1 342 1 371 3.05e-24 102
MS.gene91506.t1 MTR_7g111780 30.268 261 162 8 100 348 3 255 5.38e-24 99.8
MS.gene91506.t1 MTR_3g463930 27.826 345 209 10 29 343 44 378 9.94e-24 101
MS.gene91506.t1 MTR_1g060500 28.829 333 193 13 30 342 41 349 6.98e-23 98.2
MS.gene91506.t1 MTR_6g007090 28.000 350 204 15 28 348 38 368 7.50e-23 98.6
MS.gene91506.t1 MTR_2g015630 27.596 366 230 14 4 343 3 359 1.02e-22 98.2
MS.gene91506.t1 MTR_2g015590 27.747 364 213 15 11 343 14 358 1.18e-22 97.8
MS.gene91506.t1 MTR_1g092750 29.936 314 187 14 30 332 41 332 1.25e-22 97.4
MS.gene91506.t1 MTR_7g113860 27.429 350 212 14 28 348 28 364 1.55e-22 97.8
MS.gene91506.t1 MTR_2g017925 30.973 226 123 7 126 339 25 229 1.92e-22 95.5
MS.gene91506.t1 MTR_7g113860 27.507 349 213 14 28 348 34 370 2.06e-22 97.4
MS.gene91506.t1 MTR_2g043980 28.144 334 198 12 29 343 34 344 1.11e-21 95.1
MS.gene91506.t1 MTR_1g060490 27.795 331 207 12 30 350 38 346 1.15e-21 94.7
MS.gene91506.t1 MTR_6g007095 27.616 344 207 14 26 343 38 365 1.37e-21 96.3
MS.gene91506.t1 MTR_6g007095 27.327 333 200 14 33 343 369 681 1.00e-20 94.0
MS.gene91506.t1 MTR_1g030268 30.182 275 168 10 28 288 39 303 3.14e-21 93.2
MS.gene91506.t1 MTR_1g082390 28.108 370 215 16 11 348 15 365 5.98e-21 93.2
MS.gene91506.t1 MTR_2g015650 29.240 342 200 15 29 343 31 357 8.41e-21 92.8
MS.gene91506.t1 MTR_4g104240 25.946 370 214 15 10 343 15 360 8.56e-21 92.8
MS.gene91506.t1 MTR_1g092690 26.250 320 189 12 30 332 52 341 1.62e-20 91.7
MS.gene91506.t1 MTR_1g030265 27.178 287 178 7 81 342 53 333 1.67e-20 91.7
MS.gene91506.t1 MTR_5g062890 58.667 75 30 1 9 82 8 82 2.05e-20 85.1
MS.gene91506.t1 MTR_1g092740 27.619 315 192 12 30 332 39 329 7.87e-20 89.7
MS.gene91506.t1 MTR_7g104220 25.680 331 211 10 26 344 39 346 1.83e-19 88.6
MS.gene91506.t1 MTR_4g056290 59.322 59 24 0 290 348 46 104 2.31e-19 83.2
MS.gene91506.t1 MTR_4g056290 62.500 48 17 1 20 66 4 51 3.66e-11 60.5
MS.gene91506.t1 MTR_8g089805 27.682 289 164 11 89 343 27 304 4.22e-19 87.0
MS.gene91506.t1 MTR_0029s0050 26.316 361 229 13 1 343 1 342 6.22e-19 87.0
MS.gene91506.t1 MTR_1g092760 30.063 316 183 16 30 332 40 330 9.14e-19 86.7
MS.gene91506.t1 MTR_2g015670 27.059 340 196 13 29 343 31 343 1.15e-18 86.3
MS.gene91506.t1 MTR_0029s0100 26.316 361 229 13 1 343 1 342 1.56e-18 85.9
MS.gene91506.t1 MTR_2g079090 25.071 351 230 11 9 343 9 342 1.04e-17 83.6
MS.gene91506.t1 MTR_2g079080 25.779 353 225 13 9 343 9 342 2.41e-17 82.4
MS.gene91506.t1 MTR_5g062900 59.375 64 21 1 188 251 51 109 2.74e-17 77.8
MS.gene91506.t1 MTR_3g069780 26.409 337 214 11 29 343 30 354 2.19e-16 79.7
MS.gene91506.t1 MTR_5g084880 36.697 109 65 2 184 290 8 114 2.68e-16 75.5
MS.gene91506.t1 MTR_7g113860 26.103 272 172 9 102 348 29 296 3.99e-16 78.6
MS.gene91506.t1 MTR_3g438030 25.000 336 220 11 29 343 30 354 4.74e-16 79.0
MS.gene91506.t1 MTR_8g062580 36.190 105 66 1 235 339 74 177 1.02e-15 76.3
MS.gene91506.t1 MTR_8g012540 26.781 351 208 14 7 323 2 337 1.09e-15 77.4
MS.gene91506.t1 MTR_4g056190 62.963 54 20 0 149 202 8 61 2.86e-15 70.1
MS.gene91506.t1 MTR_2g017895 25.091 275 156 10 78 339 6 243 1.63e-14 73.2
MS.gene91506.t1 MTR_3g448360 26.036 338 215 12 29 343 29 354 2.74e-14 73.6
MS.gene91506.t1 MTR_7g033165 25.784 287 169 11 28 288 32 300 3.14e-14 72.8
MS.gene91506.t1 MTR_3g069520 24.633 341 213 12 29 343 30 352 2.25e-12 67.8
MS.gene91506.t1 MTR_6g034400 29.032 124 88 0 80 203 2 125 6.07e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91506.t1 AT5G22810 70.262 343 99 1 12 351 17 359 1.70e-178 499
MS.gene91506.t1 AT5G03820 63.533 351 118 2 11 351 7 357 3.13e-163 460
MS.gene91506.t1 AT5G03820 63.533 351 118 2 11 351 35 385 2.27e-162 459
MS.gene91506.t1 AT5G03810 65.766 333 113 1 20 351 21 353 5.47e-159 449
MS.gene91506.t1 AT3G16370 62.883 326 120 1 26 350 27 352 2.00e-149 425
MS.gene91506.t1 AT3G53100 59.184 343 139 1 8 350 9 350 1.52e-147 420
MS.gene91506.t1 AT5G42170 42.587 317 179 1 27 343 48 361 1.30e-92 281
MS.gene91506.t1 AT2G04570 38.938 339 207 0 7 345 6 344 3.88e-86 264
MS.gene91506.t1 AT1G75880 41.009 317 187 0 27 343 50 366 1.09e-84 261
MS.gene91506.t1 AT1G75900 39.053 338 203 2 8 343 20 356 1.63e-84 260
MS.gene91506.t1 AT2G42990 39.490 314 190 0 27 340 26 339 3.58e-84 259
MS.gene91506.t1 AT3G14820 39.650 343 197 3 7 343 4 342 6.76e-84 258
MS.gene91506.t1 AT1G75880 40.881 318 187 1 27 343 50 367 5.38e-83 257
MS.gene91506.t1 AT1G75890 38.690 336 202 2 8 339 23 358 2.67e-82 254
MS.gene91506.t1 AT1G75890 38.690 336 202 2 8 339 52 387 5.69e-82 255
MS.gene91506.t1 AT4G26790 38.629 321 197 0 28 348 28 348 2.71e-81 251
MS.gene91506.t1 AT4G26790 38.629 321 197 0 28 348 28 348 2.71e-81 251
MS.gene91506.t1 AT1G20120 39.873 316 190 0 28 343 77 392 3.47e-81 253
MS.gene91506.t1 AT5G45960 41.801 311 175 3 27 332 45 354 4.81e-81 252
MS.gene91506.t1 AT1G75890 37.249 349 202 3 8 339 23 371 3.49e-79 247
MS.gene91506.t1 AT1G59406 40.252 318 185 3 27 343 28 341 2.93e-78 244
MS.gene91506.t1 AT1G59030 40.252 318 185 3 27 343 28 341 2.93e-78 244
MS.gene91506.t1 AT1G58725 40.252 318 185 3 27 343 28 341 2.93e-78 244
MS.gene91506.t1 AT2G40250 38.006 321 191 3 25 339 32 350 1.54e-76 240
MS.gene91506.t1 AT1G06990 38.390 323 190 4 26 343 34 352 5.86e-74 233
MS.gene91506.t1 AT1G58520 38.769 325 187 4 27 350 28 341 9.87e-74 232
MS.gene91506.t1 AT1G58525 38.769 325 187 4 27 350 28 341 9.87e-74 232
MS.gene91506.t1 AT1G20132 37.025 316 199 0 28 343 60 375 2.67e-71 227
MS.gene91506.t1 AT3G43570 36.391 338 181 4 8 343 7 312 5.44e-70 221
MS.gene91506.t1 AT2G30220 38.125 320 194 4 24 340 28 346 3.01e-69 221
MS.gene91506.t1 AT2G24560 38.339 313 189 4 24 333 29 340 4.40e-69 221
MS.gene91506.t1 AT1G58430 37.460 315 193 4 22 333 28 341 5.12e-69 220
MS.gene91506.t1 AT2G31540 37.879 330 195 6 24 346 30 356 1.04e-68 219
MS.gene91506.t1 AT1G20130 38.369 331 187 4 27 343 182 509 2.77e-68 223
MS.gene91506.t1 AT1G20130 38.369 331 187 4 27 343 202 529 5.91e-68 223
MS.gene91506.t1 AT2G30310 37.261 314 193 4 24 334 29 341 1.06e-67 217
MS.gene91506.t1 AT5G45950 37.304 319 194 5 27 345 38 350 5.32e-67 215
MS.gene91506.t1 AT5G63170 38.188 309 177 3 27 334 26 321 8.77e-65 209
MS.gene91506.t1 AT1G29660 36.527 334 201 7 11 339 14 341 3.43e-64 208
MS.gene91506.t1 AT5G18430 34.311 341 214 5 8 343 9 344 1.15e-62 204
MS.gene91506.t1 AT1G29670 37.463 339 196 10 9 339 10 340 2.85e-62 203
MS.gene91506.t1 AT1G29670 37.463 339 196 10 9 339 78 408 1.90e-61 203
MS.gene91506.t1 AT5G15720 33.533 334 192 8 24 341 25 344 3.18e-61 200
MS.gene91506.t1 AT1G23500 38.957 326 184 4 23 347 29 340 5.67e-61 199
MS.gene91506.t1 AT1G73610 35.503 338 201 4 9 343 13 336 4.65e-60 197
MS.gene91506.t1 AT1G33811 37.730 326 188 10 24 339 29 349 6.96e-60 197
MS.gene91506.t1 AT1G75920 34.030 335 208 3 11 343 12 335 1.84e-59 195
MS.gene91506.t1 AT2G23540 35.347 331 205 5 29 351 48 377 8.62e-59 195
MS.gene91506.t1 AT5G37690 33.430 344 212 10 9 343 4 339 1.25e-58 193
MS.gene91506.t1 AT5G45670 33.140 344 220 7 1 339 1 339 2.64e-58 192
MS.gene91506.t1 AT4G10950 30.530 321 217 5 25 342 67 384 4.38e-58 193
MS.gene91506.t1 AT5G08460 32.011 353 223 7 1 339 14 363 1.40e-56 189
MS.gene91506.t1 AT1G71691 36.533 323 189 9 23 339 49 361 2.21e-56 188
MS.gene91506.t1 AT1G20135 34.897 341 204 5 1 338 1 326 2.88e-56 186
MS.gene91506.t1 AT4G28780 31.714 350 224 6 10 347 3 349 5.93e-56 187
MS.gene91506.t1 AT1G75920 32.571 350 208 4 11 343 7 345 1.07e-55 186
MS.gene91506.t1 AT1G71250 34.328 335 212 6 9 339 21 351 1.51e-55 186
MS.gene91506.t1 AT1G75910 34.940 332 201 4 15 343 16 335 1.55e-55 185
MS.gene91506.t1 AT4G18970 33.851 322 203 7 23 339 22 338 2.57e-55 185
MS.gene91506.t1 AT4G10950 30.218 321 214 6 25 342 67 380 3.13e-55 186
MS.gene91506.t1 AT5G33370 33.648 318 205 5 29 343 30 344 4.66e-55 184
MS.gene91506.t1 AT3G43550 37.736 265 160 3 27 290 28 288 4.95e-55 182
MS.gene91506.t1 AT4G18970 33.851 322 203 7 23 339 22 338 1.12e-54 184
MS.gene91506.t1 AT5G37690 33.140 344 205 11 9 343 4 331 1.44e-54 182
MS.gene91506.t1 AT1G75930 33.628 339 209 5 9 343 9 335 2.78e-54 182
MS.gene91506.t1 AT3G50400 32.927 328 212 5 24 343 29 356 3.28e-54 182
MS.gene91506.t1 AT3G04290 32.743 339 221 6 9 343 8 343 1.92e-53 180
MS.gene91506.t1 AT1G74460 33.431 341 217 8 9 343 1 337 1.86e-52 177
MS.gene91506.t1 AT1G53920 32.764 351 211 8 1 332 7 351 2.46e-52 178
MS.gene91506.t1 AT5G41890 33.333 330 198 8 31 343 33 357 3.40e-52 177
MS.gene91506.t1 AT2G24560 35.821 268 169 3 24 288 29 296 2.84e-49 168
MS.gene91506.t1 AT5G40990 32.337 368 226 9 1 351 1 362 1.29e-47 165
MS.gene91506.t1 AT2G19060 32.861 353 204 14 11 350 13 345 1.75e-47 164
MS.gene91506.t1 AT1G75920 32.423 293 186 2 53 343 25 307 7.85e-47 161
MS.gene91506.t1 AT1G71120 31.515 330 207 8 20 342 22 339 2.37e-46 161
MS.gene91506.t1 AT3G14225 33.636 330 202 8 29 346 37 361 3.33e-46 161
MS.gene91506.t1 AT3G14225 33.945 327 201 8 29 346 37 357 3.79e-46 161
MS.gene91506.t1 AT1G75920 30.149 335 190 4 11 343 12 304 6.25e-46 159
MS.gene91506.t1 AT5G15720 34.520 281 155 8 24 288 25 292 1.51e-45 158
MS.gene91506.t1 AT5G55050 31.595 326 210 9 27 343 37 358 1.92e-44 157
MS.gene91506.t1 AT2G19010 31.765 340 203 11 8 339 10 328 2.83e-44 155
MS.gene91506.t1 AT2G19010 31.765 340 203 11 8 339 40 358 7.26e-44 155
MS.gene91506.t1 AT4G16230 37.333 225 135 3 27 247 28 250 8.33e-43 149
MS.gene91506.t1 AT1G53940 30.462 325 215 6 29 346 39 359 8.46e-42 150
MS.gene91506.t1 AT2G19050 31.562 320 193 10 27 339 29 329 1.03e-41 149
MS.gene91506.t1 AT1G71691 35.496 262 160 7 23 281 49 304 1.70e-41 147
MS.gene91506.t1 AT2G31550 36.667 210 124 5 143 346 9 215 1.05e-40 142
MS.gene91506.t1 AT2G03980 31.975 319 201 8 28 339 42 351 2.97e-40 145
MS.gene91506.t1 AT2G03980 31.975 319 201 8 28 339 42 351 2.97e-40 145
MS.gene91506.t1 AT2G03980 31.975 319 201 8 28 339 42 351 2.97e-40 145
MS.gene91506.t1 AT2G03980 31.975 319 201 8 28 339 42 351 2.97e-40 145
MS.gene91506.t1 AT1G53990 29.907 321 204 7 29 340 35 343 9.43e-40 144
MS.gene91506.t1 AT5G33370 32.319 263 173 4 29 288 30 290 8.93e-39 140
MS.gene91506.t1 AT4G30140 30.625 320 194 10 28 340 32 330 9.93e-39 141
MS.gene91506.t1 AT5G14450 30.133 375 216 13 1 343 11 371 2.53e-37 138
MS.gene91506.t1 AT5G15720 29.242 277 168 7 81 341 49 313 9.85e-37 135
MS.gene91506.t1 AT1G71691 32.549 255 158 7 91 339 14 260 1.24e-34 129
MS.gene91506.t1 AT2G19050 32.143 252 156 7 27 274 29 269 2.46e-34 127
MS.gene91506.t1 AT2G27360 29.006 362 222 12 8 343 9 361 1.24e-30 120
MS.gene91506.t1 AT1G54030 31.169 308 187 9 30 335 53 337 7.64e-30 118
MS.gene91506.t1 AT1G67830 29.446 343 204 11 28 342 29 361 8.03e-30 117
MS.gene91506.t1 AT3G27950 28.035 346 208 10 28 348 31 360 1.85e-29 117
MS.gene91506.t1 AT1G28610 29.330 358 220 12 8 343 11 357 3.53e-29 116
MS.gene91506.t1 AT1G28580 28.291 357 223 11 11 343 17 364 3.86e-29 116
MS.gene91506.t1 AT2G04020 33.498 203 120 6 28 224 42 235 1.30e-28 112
MS.gene91506.t1 AT2G04020 33.498 203 120 6 28 224 42 235 2.68e-28 112
MS.gene91506.t1 AT1G53940 29.008 262 181 4 29 288 39 297 2.85e-28 112
MS.gene91506.t1 AT3G05180 27.697 343 210 10 28 343 35 366 2.13e-27 111
MS.gene91506.t1 AT1G31550 29.552 335 200 12 33 343 40 362 2.85e-27 111
MS.gene91506.t1 AT1G54790 25.581 344 216 10 28 343 31 362 4.06e-27 110
MS.gene91506.t1 AT1G28640 28.402 338 209 11 29 343 35 362 6.88e-27 110
MS.gene91506.t1 AT1G28650 27.492 331 213 9 33 343 41 364 9.54e-27 109
MS.gene91506.t1 AT1G28600 26.870 361 231 13 7 343 6 357 1.01e-26 109
MS.gene91506.t1 AT4G01130 30.000 350 202 13 29 348 34 370 2.12e-26 108
MS.gene91506.t1 AT1G09390 27.624 362 223 11 5 343 8 353 2.69e-26 108
MS.gene91506.t1 AT1G56670 26.786 336 208 11 28 343 39 356 7.36e-26 107
MS.gene91506.t1 AT1G28660 27.164 335 217 9 29 343 35 362 8.89e-26 107
MS.gene91506.t1 AT3G48460 25.680 331 221 9 30 343 39 361 1.22e-25 106
MS.gene91506.t1 AT1G28570 27.844 334 208 11 33 343 38 361 1.60e-25 106
MS.gene91506.t1 AT1G28590 28.274 336 204 12 33 343 40 363 2.97e-25 105
MS.gene91506.t1 AT1G54020 28.080 349 219 14 1 339 1 327 7.28e-25 104
MS.gene91506.t1 AT1G31550 28.698 338 204 12 29 343 36 359 1.43e-24 103
MS.gene91506.t1 AT1G28660 27.164 335 216 10 29 343 35 361 2.21e-24 102
MS.gene91506.t1 AT1G28670 25.893 336 221 8 29 343 35 363 9.15e-24 101
MS.gene91506.t1 AT3G62280 28.614 332 205 15 28 343 35 350 1.76e-23 100
MS.gene91506.t1 AT5G03610 28.962 366 214 15 8 348 14 358 1.77e-23 100
MS.gene91506.t1 AT3G26430 29.240 342 192 15 28 335 30 355 9.21e-23 98.2
MS.gene91506.t1 AT1G54000 26.761 355 227 15 9 350 12 346 1.12e-22 98.2
MS.gene91506.t1 AT1G54790 24.047 341 225 8 28 343 30 361 1.61e-22 97.8
MS.gene91506.t1 AT1G54010 25.706 354 234 13 9 351 12 347 4.03e-22 96.7
MS.gene91506.t1 AT5G45910 28.997 369 222 17 9 346 5 364 4.13e-21 93.6
MS.gene91506.t1 AT3G09930 28.435 313 197 12 30 332 40 335 4.53e-20 90.5
MS.gene91506.t1 AT3G09930 28.435 313 197 12 30 332 40 335 4.53e-20 90.5
MS.gene91506.t1 AT3G14210 28.228 333 199 17 22 339 30 337 5.42e-20 90.5
MS.gene91506.t1 AT3G14220 27.457 346 197 17 21 346 26 337 9.13e-20 89.7
MS.gene91506.t1 AT4G01130 29.682 283 163 10 96 348 8 284 3.67e-19 87.0
MS.gene91506.t1 AT1G54790 23.706 367 220 11 28 343 30 387 5.00e-19 87.8
MS.gene91506.t1 AT1G54030 29.688 256 158 8 30 283 53 288 7.20e-19 86.3
MS.gene91506.t1 AT5G03600 27.528 356 198 19 9 338 21 342 4.22e-18 84.7
MS.gene91506.t1 AT5G03600 26.667 330 190 16 27 338 12 307 9.10e-18 83.2
MS.gene91506.t1 AT1G28580 25.704 284 184 8 79 343 8 283 1.08e-17 82.8
MS.gene91506.t1 AT4G16220 44.231 104 56 1 12 115 13 114 8.19e-17 79.3
MS.gene91506.t1 AT4G01130 29.137 278 166 10 29 288 34 298 2.98e-16 79.0
MS.gene91506.t1 AT1G56670 25.993 277 171 10 28 288 39 297 3.20e-14 72.8
MS.gene91506.t1 AT3G62280 28.571 259 157 14 28 274 35 277 2.54e-12 67.0
MS.gene91506.t1 AT3G14210 27.149 221 141 9 127 339 1 209 1.89e-11 64.3
MS.gene91506.t1 AT4G16233 31.193 109 73 2 236 343 5 112 2.05e-11 61.6

Find 70 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAACTGAATATGTATTT+TGG 0.133885 2.1:+16857930 MS.gene91506:CDS
AATGCTTCATCAATTATTTC+TGG 0.165819 2.1:+16856999 MS.gene91506:CDS
GCTGATGATTTGTTAATTTC+TGG 0.186538 2.1:+16857992 MS.gene91506:CDS
GTTCCTGCATTGTTCATATT+TGG 0.193206 2.1:+16856406 MS.gene91506:CDS
TCCCTCTGAGGCTGCAAATA+AGG 0.251844 2.1:+16857964 MS.gene91506:CDS
AAATCAAATTTCCCTCCTTA+TGG 0.264671 2.1:+16856478 MS.gene91506:CDS
AACTTTGCTTCTGGTGCTTC+TGG 0.280177 2.1:+16856772 MS.gene91506:CDS
TACCTCAACTTACAGGAAAA+AGG 0.290453 2.1:+16856727 MS.gene91506:CDS
AATGGTGCCAACTTTGCTTC+TGG 0.298601 2.1:+16856763 MS.gene91506:CDS
CAAAGTTGGCACCATTTAAC+AGG 0.308739 2.1:-16856756 None:intergenic
AATACATACCTGAATGAAAA+TGG 0.310585 2.1:-16857141 None:intergenic
GTCACTAAGCCTACAGAAAA+TGG 0.316924 2.1:+16857696 MS.gene91506:CDS
CCAGCAGCCATCACTCTCTT+TGG 0.324207 2.1:+16857525 MS.gene91506:CDS
TGAGGCTGCAAATAAGGTTT+TGG 0.333933 2.1:+16857970 MS.gene91506:CDS
GTAGTGTTCAATGTGGTTAA+AGG 0.337388 2.1:+16856373 MS.gene91506:CDS
ACCAGCTTACCTCAACTTAC+AGG 0.339262 2.1:+16856720 MS.gene91506:CDS
GCACTTGGGGCAAGGAAAAT+TGG 0.350596 2.1:+16857471 MS.gene91506:CDS
AACATCTATATTGTGCAATA+AGG 0.352908 2.1:+16857886 MS.gene91506:CDS
AGGAAGGCTTGTTGTGGAAC+TGG 0.380493 2.1:+16857854 MS.gene91506:CDS
TAAAGAATGCCAGAATATAT+TGG 0.391674 2.1:+16856956 MS.gene91506:CDS
TCCTGTAAGTTGAGGTAAGC+TGG 0.400188 2.1:-16856721 None:intergenic
CATAAATCCTCTACTTTACA+AGG 0.405350 2.1:+16857073 MS.gene91506:CDS
CTACTCCTACCAATATATTC+TGG 0.408033 2.1:-16856965 None:intergenic
AATATATTGGTAGGAGTAGC+AGG 0.412574 2.1:+16856969 MS.gene91506:CDS
TTGTTAAAGTCTCTTCCATA+AGG 0.442599 2.1:-16856493 None:intergenic
TGTGACAACATTACCTCCAT+TGG 0.451988 2.1:+16857494 MS.gene91506:CDS
GGTCTAGCATGCAATCTCAT+TGG 0.453656 2.1:+16856914 MS.gene91506:intron
AGAAGCACCAGAAGCAAAGT+TGG 0.454582 2.1:-16856770 None:intergenic
TTTAACAATCAAATGGCAAC+AGG 0.455388 2.1:+16856508 MS.gene91506:CDS
AATCTCATTGGAGCAGCAAC+TGG 0.467535 2.1:+16856926 MS.gene91506:CDS
GCTATATATCTTGTTAGTGC+TGG 0.467756 2.1:+16857023 MS.gene91506:CDS
GGAGATTCTGTTGTTGATGC+AGG 0.491170 2.1:+16856427 MS.gene91506:CDS
ATATATATTTACATATAGCT+TGG 0.493884 2.1:-16856812 None:intergenic
GGAGAGGTTGGTAGATATCA+AGG 0.495758 2.1:-16857665 None:intergenic
CCAAAGAGAGTGATGGCTGC+TGG 0.506853 2.1:-16857525 None:intergenic
AAGAGACTTTAACAATCAAA+TGG 0.510683 2.1:+16856501 MS.gene91506:CDS
AAATACATATTCAGTTGCAT+TGG 0.517531 2.1:-16857927 None:intergenic
ACCTTATTTGCAGCCTCAGA+GGG 0.518564 2.1:-16857965 None:intergenic
AGAGAGTGATGGCTGCTGGC+AGG 0.519776 2.1:-16857521 None:intergenic
GTGACAACATTACCTCCATT+GGG 0.522286 2.1:+16857495 MS.gene91506:CDS
TGACAGAATTTGTATGCACT+TGG 0.530747 2.1:+16857456 MS.gene91506:intron
ATTACTGCAGCTGAAAACCT+TGG 0.536216 2.1:+16856682 MS.gene91506:intron
TGACAAGGTCATGGAGAGGT+TGG 0.538183 2.1:-16857677 None:intergenic
ATTTGTATGCACTTGGGGCA+AGG 0.542893 2.1:+16857463 MS.gene91506:CDS
TTAAAGTCTCTTCCATAAGG+AGG 0.545587 2.1:-16856490 None:intergenic
TAGGCTTAGTGACAAGGTCA+TGG 0.552443 2.1:-16857686 None:intergenic
TCTCCAAATATGAACAATGC+AGG 0.555612 2.1:-16856409 None:intergenic
TTTCTGTAGGCTTAGTGACA+AGG 0.555785 2.1:-16857692 None:intergenic
TAAAGTCTCTTCCATAAGGA+GGG 0.566792 2.1:-16856489 None:intergenic
GCTGCTGGCAGGCAACCCAA+TGG 0.573362 2.1:-16857510 None:intergenic
ATGAACAATGCAGGAACAAG+AGG 0.577996 2.1:-16856400 None:intergenic
GAAGCAAGGAAGGCTTGTTG+TGG 0.578628 2.1:+16857848 MS.gene91506:CDS
TTTACATATAGCTTGGCTGT+AGG 0.578847 2.1:-16856805 None:intergenic
ACAGCAATGAATGTGTGGAC+AGG 0.582498 2.1:+16857553 MS.gene91506:CDS
GTGGATAAGTAGTAAATCCA+AGG 0.588411 2.1:-16856699 None:intergenic
AACCTTATTTGCAGCCTCAG+AGG 0.590083 2.1:-16857966 None:intergenic
ACAATCAAATGGCAACAGGA+AGG 0.592387 2.1:+16856512 MS.gene91506:CDS
TTGTGCAATAAGGACTCGAT+AGG 0.602294 2.1:+16857896 MS.gene91506:CDS
GACAGAATTTGTATGCACTT+GGG 0.603577 2.1:+16857457 MS.gene91506:intron
ACAGAATTTGTATGCACTTG+GGG 0.615606 2.1:+16857458 MS.gene91506:intron
GCTGGCAGGCAACCCAATGG+AGG 0.616284 2.1:-16857507 None:intergenic
GAATGCCAGAATATATTGGT+AGG 0.617493 2.1:+16856960 MS.gene91506:CDS
CTCTCACAGCAATGAATGTG+TGG 0.638723 2.1:+16857548 MS.gene91506:CDS
ATATATTGGTAGGAGTAGCA+GGG 0.657477 2.1:+16856970 MS.gene91506:CDS
AGTGCTGAGTAACCTCACAT+TGG 0.660656 2.1:+16857638 MS.gene91506:CDS
TCTGTTTGTAGTGTTCAATG+TGG 0.664925 2.1:+16856366 MS.gene91506:CDS
TATCAAGGACAGCCAATGTG+AGG 0.673893 2.1:-16857650 None:intergenic
TGTAAGTTGAGGTAAGCTGG+TGG 0.679587 2.1:-16856718 None:intergenic
GTGAGAGCCAAAGAGAGTGA+TGG 0.684894 2.1:-16857532 None:intergenic
TTAGTGACAAGGTCATGGAG+AGG 0.721177 2.1:-16857681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAAATATTTGTTTTAA+TGG - chr2.1:16857180-16857199 None:intergenic 10.0%
!!! TAATATAATATTACTTGTTA+TGG + chr2.1:16857756-16857775 MS.gene91506:intron 10.0%
!! ATAAAAGAAGAAAACAAATT+AGG - chr2.1:16856882-16856901 None:intergenic 15.0%
!! ATATATATTTACATATAGCT+TGG - chr2.1:16856815-16856834 None:intergenic 15.0%
!!! ATACTGATTTACATTTTATT+TGG - chr2.1:16857220-16857239 None:intergenic 15.0%
!!! CAAATATTTAGTTTTTAAGT+AGG + chr2.1:16857186-16857205 MS.gene91506:intron 15.0%
!!! TATTATTTTTTTTAATTGGG+TGG - chr2.1:16857382-16857401 None:intergenic 15.0%
!! AAACAATAATGACCTAAATA+AGG + chr2.1:16856630-16856649 MS.gene91506:intron 20.0%
!! AAGTCCTAAATTTAACTATT+TGG + chr2.1:16857311-16857330 MS.gene91506:intron 20.0%
!! ACATTTCTAAATTCCAAAAA+TGG + chr2.1:16857430-16857449 MS.gene91506:intron 20.0%
!! AGTCCTAAATTTAACTATTT+GGG + chr2.1:16857312-16857331 MS.gene91506:intron 20.0%
!!! ATATTTGTTTTAATGGTACT+AGG - chr2.1:16857173-16857192 None:intergenic 20.0%
!!! CAAAAATCATATCCTTATTT+AGG - chr2.1:16856645-16856664 None:intergenic 20.0%
!!! GATTTACATTTTATTTGGTT+TGG - chr2.1:16857215-16857234 None:intergenic 20.0%
!!! TTCTTTTATTTGTTCCATTT+GGG + chr2.1:16856893-16856912 MS.gene91506:intron 20.0%
! AAAGGAAAAAACCTGTTAAA+TGG + chr2.1:16856745-16856764 MS.gene91506:CDS 25.0%
! AAATACATATTCAGTTGCAT+TGG - chr2.1:16857930-16857949 None:intergenic 25.0%
! AACATCTATATTGTGCAATA+AGG + chr2.1:16857886-16857905 MS.gene91506:CDS 25.0%
! AAGAGACTTTAACAATCAAA+TGG + chr2.1:16856501-16856520 MS.gene91506:CDS 25.0%
! AATACATACCTGAATGAAAA+TGG - chr2.1:16857144-16857163 None:intergenic 25.0%
! AATGCTTCATCAATTATTTC+TGG + chr2.1:16856999-16857018 MS.gene91506:CDS 25.0%
! AGACCCAAATAGTTAAATTT+AGG - chr2.1:16857318-16857337 None:intergenic 25.0%
! AGGACTTCATTTAAAAGTTT+AGG - chr2.1:16857298-16857317 None:intergenic 25.0%
! CTACTTAACTTTGATCATAT+TGG + chr2.1:16856851-16856870 MS.gene91506:intron 25.0%
! GGACTTCATTTAAAAGTTTA+GGG - chr2.1:16857297-16857316 None:intergenic 25.0%
! TAAAGAATGCCAGAATATAT+TGG + chr2.1:16856956-16856975 MS.gene91506:CDS 25.0%
! TATTTGGGTCTCTAAATTTA+AGG + chr2.1:16857327-16857346 MS.gene91506:intron 25.0%
!! ATGCAACTGAATATGTATTT+TGG + chr2.1:16857930-16857949 MS.gene91506:CDS 25.0%
!! TGCAACTGAATATGTATTTT+GGG + chr2.1:16857931-16857950 MS.gene91506:CDS 25.0%
!!! CTTCTTTTATTTGTTCCATT+TGG + chr2.1:16856892-16856911 MS.gene91506:intron 25.0%
!!! TTACATTTTATTTGGTTTGG+TGG - chr2.1:16857212-16857231 None:intergenic 25.0%
AAATCAAATTTCCCTCCTTA+TGG + chr2.1:16856478-16856497 MS.gene91506:CDS 30.0%
CATAAATCCTCTACTTTACA+AGG + chr2.1:16857073-16857092 MS.gene91506:CDS 30.0%
GTAAAAACCTTGTAAAGTAG+AGG - chr2.1:16857083-16857102 None:intergenic 30.0%
TTGTTAAAGTCTCTTCCATA+AGG - chr2.1:16856496-16856515 None:intergenic 30.0%
TTTAACAATCAAATGGCAAC+AGG + chr2.1:16856508-16856527 MS.gene91506:CDS 30.0%
! AATTCTGTCACATCCATTTT+TGG - chr2.1:16857446-16857465 None:intergenic 30.0%
! ACACTATACCATTTTCATTC+AGG + chr2.1:16857133-16857152 MS.gene91506:CDS 30.0%
! AGTAGTTTACCATTTTCTGT+AGG - chr2.1:16857708-16857727 None:intergenic 30.0%
!! ACTGAATATGTATTTTGGGA+CGG + chr2.1:16857935-16857954 MS.gene91506:CDS 30.0%
!! GCTGATGATTTGTTAATTTC+TGG + chr2.1:16857992-16858011 MS.gene91506:CDS 30.0%
!!! ATACACTACTTTTTTCTCAC+AGG + chr2.1:16857818-16857837 MS.gene91506:intron 30.0%
!!! TACACTACTTTTTTCTCACA+GGG + chr2.1:16857819-16857838 MS.gene91506:intron 30.0%
AAAGTAGTGTATGCAACAGA+AGG - chr2.1:16857810-16857829 None:intergenic 35.0%
AATATATTGGTAGGAGTAGC+AGG + chr2.1:16856969-16856988 MS.gene91506:CDS 35.0%
ACAGAATTTGTATGCACTTG+GGG + chr2.1:16857458-16857477 MS.gene91506:intron 35.0%
ACTATACATGCATGCAAAGA+AGG - chr2.1:16856585-16856604 None:intergenic 35.0%
ATATATTGGTAGGAGTAGCA+GGG + chr2.1:16856970-16856989 MS.gene91506:CDS 35.0%
CTACTCCTACCAATATATTC+TGG - chr2.1:16856968-16856987 None:intergenic 35.0%
GAATGCCAGAATATATTGGT+AGG + chr2.1:16856960-16856979 MS.gene91506:CDS 35.0%
GACAGAATTTGTATGCACTT+GGG + chr2.1:16857457-16857476 MS.gene91506:intron 35.0%
GCTATATATCTTGTTAGTGC+TGG + chr2.1:16857023-16857042 MS.gene91506:CDS 35.0%
GTAGTGTTCAATGTGGTTAA+AGG + chr2.1:16856373-16856392 MS.gene91506:CDS 35.0%
GTGGATAAGTAGTAAATCCA+AGG - chr2.1:16856702-16856721 None:intergenic 35.0%
GTTCCTGCATTGTTCATATT+TGG + chr2.1:16856406-16856425 MS.gene91506:CDS 35.0%
TAAAGTCTCTTCCATAAGGA+GGG - chr2.1:16856492-16856511 None:intergenic 35.0%
TACCTCAACTTACAGGAAAA+AGG + chr2.1:16856727-16856746 MS.gene91506:CDS 35.0%
TCTCCAAATATGAACAATGC+AGG - chr2.1:16856412-16856431 None:intergenic 35.0%
TCTGTTTGTAGTGTTCAATG+TGG + chr2.1:16856366-16856385 MS.gene91506:CDS 35.0%
TGACAGAATTTGTATGCACT+TGG + chr2.1:16857456-16857475 MS.gene91506:intron 35.0%
TTAAAGTCTCTTCCATAAGG+AGG - chr2.1:16856493-16856512 None:intergenic 35.0%
TTTACATATAGCTTGGCTGT+AGG - chr2.1:16856808-16856827 None:intergenic 35.0%
! AAACTTGCAGCAGATTTTAC+AGG + chr2.1:16856547-16856566 MS.gene91506:CDS 35.0%
! TTCCTTTTTCCTGTAAGTTG+AGG - chr2.1:16856732-16856751 None:intergenic 35.0%
! TTTTTGCAAGTTCTGTGATG+TGG - chr2.1:16857619-16857638 None:intergenic 35.0%
ACAATCAAATGGCAACAGGA+AGG + chr2.1:16856512-16856531 MS.gene91506:CDS 40.0%
ATGAACAATGCAGGAACAAG+AGG - chr2.1:16856403-16856422 None:intergenic 40.0%
ATTACTGCAGCTGAAAACCT+TGG + chr2.1:16856682-16856701 MS.gene91506:intron 40.0%
CAAAGTTGGCACCATTTAAC+AGG - chr2.1:16856759-16856778 None:intergenic 40.0%
GTCACTAAGCCTACAGAAAA+TGG + chr2.1:16857696-16857715 MS.gene91506:CDS 40.0%
GTGACAACATTACCTCCATT+GGG + chr2.1:16857495-16857514 MS.gene91506:CDS 40.0%
TGTGACAACATTACCTCCAT+TGG + chr2.1:16857494-16857513 MS.gene91506:CDS 40.0%
TTGTGCAATAAGGACTCGAT+AGG + chr2.1:16857896-16857915 MS.gene91506:CDS 40.0%
TTTCTGTAGGCTTAGTGACA+AGG - chr2.1:16857695-16857714 None:intergenic 40.0%
! AAGGTTTTCAGCTGCAGTAA+TGG - chr2.1:16856683-16856702 None:intergenic 40.0%
! TGAGGCTGCAAATAAGGTTT+TGG + chr2.1:16857970-16857989 MS.gene91506:CDS 40.0%
!! AGGGTTTTATGAAGCAAGGA+AGG + chr2.1:16857838-16857857 MS.gene91506:intron 40.0%
!! GCAACAGGAAGGTTTTGTAA+TGG + chr2.1:16856523-16856542 MS.gene91506:CDS 40.0%
!! TCACAGGGTTTTATGAAGCA+AGG + chr2.1:16857834-16857853 MS.gene91506:intron 40.0%
AACTTTGCTTCTGGTGCTTC+TGG + chr2.1:16856772-16856791 MS.gene91506:CDS 45.0%
AATCTCATTGGAGCAGCAAC+TGG + chr2.1:16856926-16856945 MS.gene91506:CDS 45.0%
ACAGCAATGAATGTGTGGAC+AGG + chr2.1:16857553-16857572 MS.gene91506:CDS 45.0%
ACCAGCTTACCTCAACTTAC+AGG + chr2.1:16856720-16856739 MS.gene91506:CDS 45.0%
ATTTGTATGCACTTGGGGCA+AGG + chr2.1:16857463-16857482 MS.gene91506:CDS 45.0%
CTCTCACAGCAATGAATGTG+TGG + chr2.1:16857548-16857567 MS.gene91506:CDS 45.0%
GATTGCATGCTAGACCCAAA+TGG - chr2.1:16856910-16856929 None:intergenic 45.0%
GGAGATTCTGTTGTTGATGC+AGG + chr2.1:16856427-16856446 MS.gene91506:CDS 45.0%
GGTCTAGCATGCAATCTCAT+TGG + chr2.1:16856914-16856933 MS.gene91506:intron 45.0%
TAGGCTTAGTGACAAGGTCA+TGG - chr2.1:16857689-16857708 None:intergenic 45.0%
TATCAAGGACAGCCAATGTG+AGG - chr2.1:16857653-16857672 None:intergenic 45.0%
TTAGTGACAAGGTCATGGAG+AGG - chr2.1:16857684-16857703 None:intergenic 45.0%
! AACCTTATTTGCAGCCTCAG+AGG - chr2.1:16857969-16857988 None:intergenic 45.0%
! AATGGTGCCAACTTTGCTTC+TGG + chr2.1:16856763-16856782 MS.gene91506:CDS 45.0%
! ACCTTATTTGCAGCCTCAGA+GGG - chr2.1:16857968-16857987 None:intergenic 45.0%
! AGTGCTGAGTAACCTCACAT+TGG + chr2.1:16857638-16857657 MS.gene91506:CDS 45.0%
! CTTGTTATGGCTCATGAGCA+AGG + chr2.1:16857769-16857788 MS.gene91506:intron 45.0%
! TCCTGTAAGTTGAGGTAAGC+TGG - chr2.1:16856724-16856743 None:intergenic 45.0%
! TGTAAGTTGAGGTAAGCTGG+TGG - chr2.1:16856721-16856740 None:intergenic 45.0%
!! AGAAGCACCAGAAGCAAAGT+TGG - chr2.1:16856773-16856792 None:intergenic 45.0%
!! GGAGAGGTTGGTAGATATCA+AGG - chr2.1:16857668-16857687 None:intergenic 45.0%
!!! AAACTATTATTTTTTTTAAT+TGG - chr2.1:16857386-16857405 None:intergenic 5.0%
!!! AACTATTATTTTTTTTAATT+GGG - chr2.1:16857385-16857404 None:intergenic 5.0%
GCACTTGGGGCAAGGAAAAT+TGG + chr2.1:16857471-16857490 MS.gene91506:CDS 50.0%
GTGAGAGCCAAAGAGAGTGA+TGG - chr2.1:16857535-16857554 None:intergenic 50.0%
TGACAAGGTCATGGAGAGGT+TGG - chr2.1:16857680-16857699 None:intergenic 50.0%
!! AGGAAGGCTTGTTGTGGAAC+TGG + chr2.1:16857854-16857873 MS.gene91506:CDS 50.0%
!! GAAGCAAGGAAGGCTTGTTG+TGG + chr2.1:16857848-16857867 MS.gene91506:CDS 50.0%
!! TCCCTCTGAGGCTGCAAATA+AGG + chr2.1:16857964-16857983 MS.gene91506:CDS 50.0%
CCAAAGAGAGTGATGGCTGC+TGG - chr2.1:16857528-16857547 None:intergenic 55.0%
CCAGCAGCCATCACTCTCTT+TGG + chr2.1:16857525-16857544 MS.gene91506:CDS 55.0%
! GGACGGTTTTCATCCCTCTG+AGG + chr2.1:16857952-16857971 MS.gene91506:CDS 55.0%
AGAGAGTGATGGCTGCTGGC+AGG - chr2.1:16857524-16857543 None:intergenic 60.0%
GCTGCTGGCAGGCAACCCAA+TGG - chr2.1:16857513-16857532 None:intergenic 65.0%
GCTGGCAGGCAACCCAATGG+AGG - chr2.1:16857510-16857529 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 16856328 16858033 16856328 ID=MS.gene91506
chr2.1 mRNA 16856328 16858033 16856328 ID=MS.gene91506.t1;Parent=MS.gene91506
chr2.1 exon 16856328 16856568 16856328 ID=MS.gene91506.t1.exon1;Parent=MS.gene91506.t1
chr2.1 CDS 16856328 16856568 16856328 ID=cds.MS.gene91506.t1;Parent=MS.gene91506.t1
chr2.1 exon 16856692 16856822 16856692 ID=MS.gene91506.t1.exon2;Parent=MS.gene91506.t1
chr2.1 CDS 16856692 16856822 16856692 ID=cds.MS.gene91506.t1;Parent=MS.gene91506.t1
chr2.1 exon 16856921 16857154 16856921 ID=MS.gene91506.t1.exon3;Parent=MS.gene91506.t1
chr2.1 CDS 16856921 16857154 16856921 ID=cds.MS.gene91506.t1;Parent=MS.gene91506.t1
chr2.1 exon 16857462 16857717 16857462 ID=MS.gene91506.t1.exon4;Parent=MS.gene91506.t1
chr2.1 CDS 16857462 16857717 16857462 ID=cds.MS.gene91506.t1;Parent=MS.gene91506.t1
chr2.1 exon 16857840 16858033 16857840 ID=MS.gene91506.t1.exon5;Parent=MS.gene91506.t1
chr2.1 CDS 16857840 16858033 16857840 ID=cds.MS.gene91506.t1;Parent=MS.gene91506.t1
Gene Sequence

>MS.gene91506

ATGGAGCATTCAACTTATAATTTCTTGACATTTTTGCTTCTGTTTGTAGTGTTCAATGTGGTTAAAGGACAGCCTCTTGTTCCTGCATTGTTCATATTTGGAGATTCTGTTGTTGATGCAGGAAATAACAATAACTTATACACAATTGTTAAATCAAATTTCCCTCCTTATGGAAGAGACTTTAACAATCAAATGGCAACAGGAAGGTTTTGTAATGGAAAACTTGCAGCAGATTTTACAGGTAATTTTTTTCTCCTTCTTTGCATGCATGTATAGTTACGTTCAATTTTTTTCATATTATAAAACAATAATGACCTAAATAAGGATATGATTTTTGATGAGTTTTTTGCATCCATTACTGCAGCTGAAAACCTTGGATTTACTACTTATCCACCAGCTTACCTCAACTTACAGGAAAAAGGAAAAAACCTGTTAAATGGTGCCAACTTTGCTTCTGGTGCTTCTGGCTACTTTGATCCTACAGCCAAGCTATATGTAAATATATATTTTCATGTTATTTTTTCTACTTAACTTTGATCATATTGGTTAATCCTAATTTGTTTTCTTCTTTTATTTGTTCCATTTGGGTCTAGCATGCAATCTCATTGGAGCAGCAACTGGAACACTATAAAGAATGCCAGAATATATTGGTAGGAGTAGCAGGGAAATCAAATGCTTCATCAATTATTTCTGGTGCTATATATCTTGTTAGTGCTGGAAGCAGTGACTTTGTTCAAAACTATTACATAAATCCTCTACTTTACAAGGTTTTTACTGCTGATCAATTTTCAGATATTCTCATGCAACACTATACCATTTTCATTCAGGTATGTATTTCTTAACCTAGTACCATTAAAACAAATATTTAGTTTTTAAGTAGGCCACCAAACCAAATAAAATGTAAATCAGTATTTGAATTTGTCAAAAATATTTAATTTGATCTCTTAACTATTTTTTTATTTGAGTCCCTAAACTTTTAAATGAAGTCCTAAATTTAACTATTTGGGTCTCTAAATTTAAGGACTTGATTACAAATTATTTAAGAGTTTAGCCACCCAATTAAAAAAAATAATAGTTTAAGAACTTCATTGATTTTAATTTGACATTTCTAAATTCCAAAAATGGATGTGACAGAATTTGTATGCACTTGGGGCAAGGAAAATTGGTGTGACAACATTACCTCCATTGGGTTGCCTGCCAGCAGCCATCACTCTCTTTGGCTCTCACAGCAATGAATGTGTGGACAGGCTAAACAATGATGCTCTTAACTTCAACACTAAGCTAAACACCACATCACAGAACTTGCAAAAAGTGCTGAGTAACCTCACATTGGCTGTCCTTGATATCTACCAACCTCTCCATGACCTTGTCACTAAGCCTACAGAAAATGGTAAACTACTTCATAAGTGTCTGTTTGATTTTTTTATATAATATAATATTACTTGTTATGGCTCATGAGCAAGGACTATGAATAATTTTCCTTCTGTTGCATACACTACTTTTTTCTCACAGGGTTTTATGAAGCAAGGAAGGCTTGTTGTGGAACTGGCTTGATAGAAACATCTATATTGTGCAATAAGGACTCGATAGGAACATGTGCCAATGCAACTGAATATGTATTTTGGGACGGTTTTCATCCCTCTGAGGCTGCAAATAAGGTTTTGGCTGATGATTTGTTAATTTCTGGCATCTCTCTCATATCCTAA
Protein sequence

>MS.gene91506.t1

MEHSTYNFLTFLLLFVVFNVVKGQPLVPALFIFGDSVVDAGNNNNLYTIVKSNFPPYGRDFNNQMATGRFCNGKLAADFTAENLGFTTYPPAYLNLQEKGKNLLNGANFASGASGYFDPTAKLYHAISLEQQLEHYKECQNILVGVAGKSNASSIISGAIYLVSAGSSDFVQNYYINPLLYKVFTADQFSDILMQHYTIFIQNLYALGARKIGVTTLPPLGCLPAAITLFGSHSNECVDRLNNDALNFNTKLNTTSQNLQKVLSNLTLAVLDIYQPLHDLVTKPTENGFYEARKACCGTGLIETSILCNKDSIGTCANATEYVFWDGFHPSEAANKVLADDLLISGISLIS