Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91571.t1 | KEH22973.1 | 93.6 | 265 | 17 | 0 | 1 | 265 | 1 | 265 | 3.70E-139 | 504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91571.t1 | Q9LHT0 | 61.0 | 254 | 96 | 1 | 11 | 264 | 4 | 254 | 1.5e-85 | 317.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91571.t1 | A0A072U1F3 | 93.6 | 265 | 17 | 0 | 1 | 265 | 1 | 265 | 2.6e-139 | 504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055211 | MS.gene91571 | 0.83869 | 2.47E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91571.t1 | MTR_7g063270 | 93.585 | 265 | 17 | 0 | 1 | 265 | 1 | 265 | 0.0 | 520 |
| MS.gene91571.t1 | MTR_7g063260 | 88.346 | 266 | 30 | 1 | 1 | 265 | 1 | 266 | 2.08e-179 | 494 |
| MS.gene91571.t1 | MTR_7g063390 | 75.849 | 265 | 63 | 1 | 1 | 264 | 1 | 265 | 9.02e-149 | 416 |
| MS.gene91571.t1 | MTR_7g063360 | 75.849 | 265 | 63 | 1 | 1 | 264 | 1 | 265 | 6.11e-145 | 407 |
| MS.gene91571.t1 | MTR_7g063270 | 75.849 | 265 | 15 | 1 | 1 | 265 | 1 | 216 | 2.03e-141 | 396 |
| MS.gene91571.t1 | MTR_7g063330 | 67.925 | 265 | 84 | 1 | 1 | 265 | 1 | 264 | 9.56e-137 | 386 |
| MS.gene91571.t1 | MTR_7g063320 | 70.455 | 264 | 76 | 2 | 1 | 263 | 1 | 263 | 8.83e-135 | 381 |
| MS.gene91571.t1 | MTR_4g064883 | 58.661 | 254 | 102 | 1 | 11 | 264 | 9 | 259 | 2.13e-110 | 319 |
| MS.gene91571.t1 | MTR_3g068070 | 59.696 | 263 | 101 | 2 | 3 | 264 | 2 | 260 | 8.95e-109 | 315 |
| MS.gene91571.t1 | MTR_4g064887 | 56.061 | 264 | 112 | 2 | 1 | 264 | 1 | 260 | 3.16e-106 | 309 |
| MS.gene91571.t1 | MTR_3g068155 | 56.589 | 258 | 109 | 1 | 7 | 264 | 10 | 264 | 6.09e-105 | 306 |
| MS.gene91571.t1 | MTR_3g068085 | 58.233 | 249 | 101 | 1 | 16 | 264 | 15 | 260 | 1.56e-101 | 297 |
| MS.gene91571.t1 | MTR_3g068175 | 55.894 | 263 | 113 | 1 | 2 | 264 | 3 | 262 | 5.50e-101 | 296 |
| MS.gene91571.t1 | MTR_3g068065 | 58.400 | 250 | 101 | 1 | 16 | 265 | 17 | 263 | 1.02e-99 | 292 |
| MS.gene91571.t1 | MTR_3g068175 | 55.056 | 267 | 113 | 2 | 2 | 264 | 3 | 266 | 1.01e-98 | 290 |
| MS.gene91571.t1 | MTR_4g064883 | 59.799 | 199 | 80 | 0 | 11 | 209 | 9 | 207 | 8.78e-87 | 257 |
| MS.gene91571.t1 | MTR_4g064887 | 56.098 | 205 | 89 | 1 | 1 | 205 | 1 | 204 | 1.89e-80 | 242 |
| MS.gene91571.t1 | MTR_4g132850 | 34.510 | 255 | 157 | 6 | 12 | 265 | 5 | 250 | 7.95e-34 | 123 |
| MS.gene91571.t1 | MTR_4g131740 | 33.594 | 256 | 155 | 6 | 16 | 262 | 40 | 289 | 9.34e-28 | 108 |
| MS.gene91571.t1 | MTR_7g113650 | 33.721 | 258 | 151 | 10 | 16 | 262 | 40 | 288 | 1.71e-26 | 105 |
| MS.gene91571.t1 | MTR_3g085740 | 31.301 | 246 | 155 | 4 | 22 | 262 | 81 | 317 | 2.22e-25 | 102 |
| MS.gene91571.t1 | MTR_7g094510 | 31.102 | 254 | 164 | 5 | 16 | 263 | 6 | 254 | 2.51e-25 | 101 |
| MS.gene91571.t1 | MTR_1g082760 | 31.518 | 257 | 158 | 8 | 16 | 262 | 40 | 288 | 3.06e-25 | 101 |
| MS.gene91571.t1 | MTR_8g442750 | 29.658 | 263 | 157 | 8 | 16 | 262 | 14 | 264 | 1.68e-24 | 99.8 |
| MS.gene91571.t1 | MTR_7g094520 | 29.845 | 258 | 162 | 5 | 16 | 263 | 11 | 259 | 1.30e-23 | 96.7 |
| MS.gene91571.t1 | MTR_1g068955 | 31.559 | 263 | 148 | 8 | 16 | 261 | 14 | 261 | 1.13e-21 | 92.0 |
| MS.gene91571.t1 | MTR_7g080410 | 29.947 | 187 | 125 | 5 | 23 | 204 | 45 | 230 | 6.84e-19 | 84.3 |
| MS.gene91571.t1 | MTR_7g080410 | 29.947 | 187 | 125 | 5 | 23 | 204 | 45 | 230 | 9.95e-19 | 84.3 |
| MS.gene91571.t1 | MTR_4g058810 | 26.459 | 257 | 177 | 7 | 16 | 264 | 11 | 263 | 3.89e-18 | 82.0 |
| MS.gene91571.t1 | MTR_4g052350 | 31.273 | 275 | 161 | 12 | 1 | 264 | 1 | 258 | 4.39e-18 | 82.0 |
| MS.gene91571.t1 | MTR_4g058840 | 26.848 | 257 | 176 | 7 | 16 | 264 | 11 | 263 | 1.11e-17 | 80.9 |
| MS.gene91571.t1 | MTR_4g058820 | 26.848 | 257 | 176 | 7 | 16 | 264 | 11 | 263 | 1.11e-17 | 80.9 |
| MS.gene91571.t1 | MTR_7g071680 | 29.861 | 288 | 167 | 11 | 3 | 265 | 18 | 295 | 1.96e-17 | 80.5 |
| MS.gene91571.t1 | MTR_1196s0010 | 29.555 | 247 | 158 | 7 | 21 | 263 | 279 | 513 | 4.26e-17 | 80.9 |
| MS.gene91571.t1 | MTR_6g023910 | 29.259 | 270 | 175 | 9 | 1 | 263 | 1 | 261 | 3.34e-16 | 76.6 |
| MS.gene91571.t1 | MTR_8g044240 | 29.952 | 207 | 127 | 6 | 22 | 215 | 75 | 276 | 6.83e-16 | 76.6 |
| MS.gene91571.t1 | MTR_6g023590 | 28.889 | 270 | 176 | 9 | 1 | 263 | 1 | 261 | 2.05e-15 | 74.3 |
| MS.gene91571.t1 | MTR_4g052320 | 29.528 | 254 | 166 | 8 | 16 | 264 | 8 | 253 | 2.36e-15 | 74.3 |
| MS.gene91571.t1 | MTR_4g052300 | 29.528 | 254 | 165 | 9 | 16 | 264 | 8 | 252 | 2.55e-15 | 73.9 |
| MS.gene91571.t1 | MTR_6g023610 | 27.612 | 268 | 182 | 7 | 1 | 263 | 1 | 261 | 3.20e-15 | 73.9 |
| MS.gene91571.t1 | MTR_4g052340 | 27.888 | 251 | 167 | 7 | 16 | 261 | 14 | 255 | 9.62e-15 | 72.4 |
| MS.gene91571.t1 | MTR_1579s0020 | 38.554 | 83 | 47 | 1 | 182 | 264 | 1 | 79 | 5.36e-14 | 66.2 |
| MS.gene91571.t1 | MTR_4g058830 | 29.341 | 167 | 104 | 6 | 103 | 264 | 52 | 209 | 8.53e-14 | 68.9 |
| MS.gene91571.t1 | MTR_3g020670 | 30.651 | 261 | 163 | 7 | 16 | 264 | 16 | 270 | 3.00e-13 | 68.6 |
| MS.gene91571.t1 | MTR_7g083870 | 28.082 | 292 | 170 | 12 | 3 | 265 | 8 | 288 | 4.32e-13 | 68.2 |
| MS.gene91571.t1 | MTR_6g023600 | 27.778 | 270 | 179 | 9 | 1 | 263 | 1 | 261 | 6.53e-13 | 67.4 |
| MS.gene91571.t1 | MTR_7g107670 | 28.736 | 261 | 167 | 9 | 16 | 265 | 33 | 285 | 1.19e-12 | 67.0 |
| MS.gene91571.t1 | MTR_7g110160 | 29.457 | 258 | 151 | 9 | 13 | 264 | 3 | 235 | 1.41e-12 | 66.2 |
| MS.gene91571.t1 | MTR_6g088500 | 27.536 | 207 | 129 | 5 | 22 | 208 | 184 | 389 | 3.41e-12 | 66.2 |
| MS.gene91571.t1 | MTR_1275s0010 | 30.952 | 126 | 84 | 1 | 140 | 265 | 259 | 381 | 3.42e-12 | 66.2 |
| MS.gene91571.t1 | MTR_6g088500 | 27.317 | 205 | 128 | 5 | 22 | 206 | 184 | 387 | 4.76e-12 | 65.9 |
| MS.gene91571.t1 | MTR_4g078630 | 27.170 | 265 | 167 | 7 | 16 | 265 | 19 | 272 | 1.05e-11 | 63.9 |
| MS.gene91571.t1 | MTR_6g023950 | 27.203 | 261 | 165 | 9 | 16 | 263 | 13 | 261 | 1.13e-11 | 63.9 |
| MS.gene91571.t1 | MTR_7g105580 | 25.882 | 255 | 160 | 8 | 16 | 265 | 8 | 238 | 2.08e-11 | 62.8 |
| MS.gene91571.t1 | MTR_6g023600 | 27.407 | 270 | 174 | 9 | 1 | 263 | 1 | 255 | 2.86e-11 | 62.4 |
| MS.gene91571.t1 | MTR_7g105590 | 26.984 | 189 | 131 | 5 | 16 | 201 | 8 | 192 | 3.88e-11 | 61.2 |
| MS.gene91571.t1 | MTR_7g076665 | 28.625 | 269 | 112 | 10 | 21 | 217 | 9 | 269 | 5.98e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91571.t1 | AT5G06060 | 61.024 | 254 | 96 | 1 | 11 | 264 | 4 | 254 | 3.36e-112 | 324 |
| MS.gene91571.t1 | AT1G07440 | 57.647 | 255 | 104 | 1 | 10 | 264 | 6 | 256 | 2.91e-105 | 306 |
| MS.gene91571.t1 | AT2G29320 | 60.156 | 256 | 97 | 3 | 11 | 264 | 7 | 259 | 1.22e-104 | 305 |
| MS.gene91571.t1 | AT2G29300 | 59.216 | 255 | 100 | 2 | 11 | 264 | 2 | 253 | 1.90e-103 | 301 |
| MS.gene91571.t1 | AT2G29260 | 56.126 | 253 | 108 | 1 | 12 | 264 | 64 | 313 | 5.62e-103 | 303 |
| MS.gene91571.t1 | AT2G29300 | 59.216 | 255 | 100 | 2 | 11 | 264 | 2 | 253 | 1.26e-102 | 300 |
| MS.gene91571.t1 | AT2G29340 | 58.661 | 254 | 102 | 1 | 11 | 264 | 2 | 252 | 3.41e-102 | 298 |
| MS.gene91571.t1 | AT2G29340 | 58.661 | 254 | 102 | 1 | 11 | 264 | 2 | 252 | 1.20e-101 | 298 |
| MS.gene91571.t1 | AT2G29290 | 56.693 | 254 | 107 | 1 | 11 | 264 | 2 | 252 | 2.28e-101 | 296 |
| MS.gene91571.t1 | AT2G29360 | 55.094 | 265 | 114 | 3 | 1 | 264 | 1 | 261 | 4.20e-100 | 293 |
| MS.gene91571.t1 | AT2G29150 | 56.870 | 262 | 109 | 2 | 1 | 262 | 1 | 258 | 7.47e-100 | 293 |
| MS.gene91571.t1 | AT2G29310 | 57.087 | 254 | 106 | 1 | 11 | 264 | 2 | 252 | 2.79e-99 | 291 |
| MS.gene91571.t1 | AT1G07450 | 55.952 | 252 | 107 | 2 | 13 | 264 | 5 | 252 | 1.28e-98 | 289 |
| MS.gene91571.t1 | AT2G29330 | 57.087 | 254 | 106 | 2 | 11 | 264 | 2 | 252 | 3.78e-98 | 288 |
| MS.gene91571.t1 | AT2G29350 | 56.078 | 255 | 108 | 1 | 10 | 264 | 9 | 259 | 9.63e-98 | 287 |
| MS.gene91571.t1 | AT2G30670 | 55.118 | 254 | 111 | 1 | 11 | 264 | 2 | 252 | 3.15e-97 | 286 |
| MS.gene91571.t1 | AT2G29370 | 54.651 | 258 | 113 | 2 | 8 | 264 | 7 | 261 | 7.34e-95 | 280 |
| MS.gene91571.t1 | AT2G29320 | 58.547 | 234 | 93 | 2 | 32 | 264 | 11 | 241 | 6.53e-93 | 274 |
| MS.gene91571.t1 | AT2G29290 | 54.310 | 232 | 103 | 1 | 33 | 264 | 7 | 235 | 4.31e-87 | 259 |
| MS.gene91571.t1 | AT2G29310 | 54.936 | 233 | 102 | 1 | 32 | 264 | 21 | 250 | 2.19e-85 | 256 |
| MS.gene91571.t1 | AT2G29350 | 54.018 | 224 | 99 | 1 | 41 | 264 | 2 | 221 | 6.38e-81 | 243 |
| MS.gene91571.t1 | AT2G29320 | 59.406 | 202 | 80 | 2 | 11 | 210 | 7 | 208 | 2.06e-79 | 238 |
| MS.gene91571.t1 | AT2G29340 | 58.209 | 201 | 84 | 0 | 11 | 211 | 2 | 202 | 2.79e-78 | 235 |
| MS.gene91571.t1 | AT2G29340 | 58.209 | 201 | 84 | 0 | 11 | 211 | 2 | 202 | 2.79e-78 | 235 |
| MS.gene91571.t1 | AT2G29350 | 55.721 | 201 | 89 | 0 | 10 | 210 | 9 | 209 | 2.36e-76 | 231 |
| MS.gene91571.t1 | AT2G29310 | 56.281 | 199 | 87 | 0 | 11 | 209 | 2 | 200 | 2.74e-75 | 228 |
| MS.gene91571.t1 | AT1G07440 | 55.621 | 169 | 75 | 0 | 10 | 178 | 6 | 174 | 9.64e-64 | 197 |
| MS.gene91571.t1 | AT2G29310 | 53.371 | 178 | 83 | 0 | 32 | 209 | 21 | 198 | 3.30e-61 | 192 |
| MS.gene91571.t1 | AT2G29170 | 62.500 | 96 | 35 | 1 | 8 | 102 | 7 | 102 | 2.55e-38 | 130 |
| MS.gene91571.t1 | AT4G05530 | 35.060 | 251 | 155 | 5 | 16 | 265 | 9 | 252 | 2.04e-34 | 125 |
| MS.gene91571.t1 | AT3G03980 | 32.714 | 269 | 165 | 4 | 7 | 263 | 5 | 269 | 7.11e-34 | 124 |
| MS.gene91571.t1 | AT1G54870 | 34.375 | 256 | 152 | 7 | 16 | 262 | 82 | 330 | 2.17e-31 | 119 |
| MS.gene91571.t1 | AT1G54870 | 34.375 | 256 | 152 | 7 | 16 | 262 | 84 | 332 | 2.68e-31 | 119 |
| MS.gene91571.t1 | AT3G05260 | 35.294 | 255 | 150 | 7 | 16 | 262 | 37 | 284 | 4.76e-31 | 117 |
| MS.gene91571.t1 | AT5G18210 | 33.333 | 258 | 158 | 5 | 15 | 263 | 7 | 259 | 2.18e-30 | 114 |
| MS.gene91571.t1 | AT4G13180 | 32.549 | 255 | 159 | 5 | 16 | 263 | 13 | 261 | 4.51e-28 | 108 |
| MS.gene91571.t1 | AT5G18210 | 33.473 | 239 | 145 | 5 | 15 | 244 | 7 | 240 | 3.52e-26 | 103 |
| MS.gene91571.t1 | AT1G24360 | 32.143 | 252 | 145 | 7 | 22 | 262 | 80 | 316 | 8.89e-26 | 103 |
| MS.gene91571.t1 | AT3G04000 | 33.086 | 269 | 163 | 4 | 7 | 262 | 5 | 269 | 6.89e-25 | 100 |
| MS.gene91571.t1 | AT3G12800 | 28.295 | 258 | 164 | 6 | 18 | 262 | 12 | 261 | 6.75e-23 | 95.5 |
| MS.gene91571.t1 | AT3G03330 | 30.303 | 198 | 131 | 4 | 12 | 203 | 37 | 233 | 2.67e-18 | 83.2 |
| MS.gene91571.t1 | AT1G63380 | 26.800 | 250 | 174 | 7 | 22 | 264 | 21 | 268 | 5.27e-18 | 81.6 |
| MS.gene91571.t1 | AT1G63380 | 26.800 | 250 | 174 | 7 | 22 | 264 | 25 | 272 | 5.50e-18 | 82.0 |
| MS.gene91571.t1 | AT1G63380 | 26.800 | 250 | 174 | 7 | 22 | 264 | 23 | 270 | 5.86e-18 | 81.6 |
| MS.gene91571.t1 | AT1G63380 | 26.800 | 250 | 174 | 7 | 22 | 264 | 28 | 275 | 6.78e-18 | 81.6 |
| MS.gene91571.t1 | AT1G62610 | 26.400 | 250 | 175 | 7 | 22 | 264 | 19 | 266 | 1.44e-17 | 80.5 |
| MS.gene91571.t1 | AT1G62610 | 26.400 | 250 | 175 | 7 | 22 | 264 | 21 | 268 | 1.74e-17 | 80.5 |
| MS.gene91571.t1 | AT1G62610 | 26.400 | 250 | 175 | 7 | 22 | 264 | 20 | 267 | 1.77e-17 | 80.5 |
| MS.gene91571.t1 | AT1G62610 | 26.400 | 250 | 175 | 7 | 22 | 264 | 25 | 272 | 1.84e-17 | 80.5 |
| MS.gene91571.t1 | AT3G42960 | 29.889 | 271 | 161 | 10 | 11 | 265 | 5 | 262 | 3.54e-17 | 79.3 |
| MS.gene91571.t1 | AT3G55290 | 27.734 | 256 | 163 | 8 | 22 | 264 | 23 | 269 | 4.84e-17 | 79.3 |
| MS.gene91571.t1 | AT3G55290 | 27.734 | 256 | 163 | 8 | 22 | 264 | 24 | 270 | 5.64e-17 | 79.0 |
| MS.gene91571.t1 | AT3G55310 | 26.877 | 253 | 169 | 7 | 22 | 264 | 23 | 269 | 6.21e-17 | 79.0 |
| MS.gene91571.t1 | AT3G46170 | 26.295 | 251 | 173 | 7 | 22 | 264 | 32 | 278 | 4.35e-16 | 76.6 |
| MS.gene91571.t1 | AT5G04900 | 28.829 | 222 | 131 | 9 | 3 | 208 | 66 | 276 | 6.25e-16 | 77.0 |
| MS.gene91571.t1 | AT3G51680 | 27.660 | 282 | 182 | 9 | 1 | 265 | 20 | 296 | 5.01e-15 | 73.9 |
| MS.gene91571.t1 | AT4G03140 | 26.848 | 257 | 177 | 7 | 16 | 265 | 78 | 330 | 5.47e-15 | 73.9 |
| MS.gene91571.t1 | AT3G26760 | 28.571 | 259 | 171 | 7 | 16 | 264 | 36 | 290 | 8.09e-15 | 73.2 |
| MS.gene91571.t1 | AT2G17845 | 25.292 | 257 | 167 | 8 | 22 | 262 | 53 | 300 | 1.25e-14 | 72.8 |
| MS.gene91571.t1 | AT4G13250 | 26.693 | 251 | 158 | 6 | 22 | 247 | 165 | 414 | 3.29e-14 | 72.4 |
| MS.gene91571.t1 | AT3G47350 | 30.412 | 194 | 122 | 7 | 18 | 205 | 46 | 232 | 4.49e-14 | 71.2 |
| MS.gene91571.t1 | AT3G47350 | 30.412 | 194 | 122 | 7 | 18 | 205 | 46 | 232 | 4.76e-14 | 71.2 |
| MS.gene91571.t1 | AT3G03350 | 31.792 | 173 | 105 | 4 | 36 | 203 | 188 | 352 | 1.60e-13 | 70.1 |
| MS.gene91571.t1 | AT1G49670 | 30.667 | 225 | 129 | 11 | 18 | 224 | 6 | 221 | 5.73e-13 | 68.9 |
| MS.gene91571.t1 | AT1G49670 | 30.667 | 225 | 129 | 11 | 18 | 224 | 6 | 221 | 6.21e-13 | 68.9 |
| MS.gene91571.t1 | AT3G47360 | 30.208 | 192 | 121 | 7 | 20 | 205 | 49 | 233 | 1.85e-12 | 66.6 |
| MS.gene91571.t1 | AT4G13250 | 26.295 | 251 | 157 | 7 | 22 | 247 | 165 | 412 | 6.34e-12 | 65.5 |
| MS.gene91571.t1 | AT1G67730 | 28.571 | 203 | 132 | 5 | 17 | 210 | 50 | 248 | 1.01e-11 | 64.3 |
| MS.gene91571.t1 | AT3G26770 | 25.758 | 264 | 172 | 8 | 16 | 265 | 41 | 294 | 1.58e-11 | 63.9 |
| MS.gene91571.t1 | AT3G29260 | 28.137 | 263 | 159 | 9 | 16 | 264 | 6 | 252 | 8.21e-11 | 61.2 |
Find 56 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCATATTATCCGTTTA+TGG | 0.156544 | 7.1:-38548299 | MS.gene91571:CDS |
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7.1:-38548757 | MS.gene91571:CDS |
| GGCTCCATAAACGGATAATA+TGG | 0.267329 | 7.1:+38548295 | None:intergenic |
| AGAAGATATTAACAAATGTT+TGG | 0.348298 | 7.1:-38548704 | MS.gene91571:CDS |
| GTGTTTACTTCGTCCATTGC+TGG | 0.353879 | 7.1:-38548332 | MS.gene91571:CDS |
| ACTAGTGATGATATCTCTTT+AGG | 0.358021 | 7.1:+38542777 | None:intergenic |
| CACCCTCTTCTAAAACAATC+TGG | 0.361642 | 7.1:-38548368 | MS.gene91571:CDS |
| GATAAAAGATGGTCACTATA+TGG | 0.364503 | 7.1:-38549344 | MS.gene91571:CDS |
| AGTAAGGGGTTTAATGTAAC+AGG | 0.367595 | 7.1:-38548670 | MS.gene91571:CDS |
| CGTCACTCTTGCAATCAATC+AGG | 0.393493 | 7.1:-38545261 | MS.gene91571:CDS |
| TTAACAAATGTTTGGAAGAG+TGG | 0.416511 | 7.1:-38548696 | MS.gene91571:CDS |
| AACAAAGTTAAGCAGCTTCA+AGG | 0.417397 | 7.1:-38549366 | MS.gene91571:CDS |
| ACGGGAGGAACCCGAGGCAT+TGG | 0.426890 | 7.1:-38549305 | MS.gene91571:CDS |
| ATTGTTTCTTCTATCTTTCA+CGG | 0.433445 | 7.1:-38548598 | MS.gene91571:CDS |
| GAAGATATAAACACTACAAT+TGG | 0.437311 | 7.1:-38548431 | MS.gene91571:CDS |
| TGAACAACGCAAGAAACTAA+TGG | 0.437497 | 7.1:-38548623 | MS.gene91571:CDS |
| GGACAAGTTATAGCTATTGA+TGG | 0.448377 | 7.1:-38542717 | MS.gene91571:CDS |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7.1:-38545295 | MS.gene91571:CDS |
| CGGGAGGAACCCGAGGCATT+GGG | 0.464141 | 7.1:-38549304 | MS.gene91571:intron |
| TTTGGAAGAGTGGAAAAGTA+AGG | 0.465710 | 7.1:-38548686 | MS.gene91571:CDS |
| TGTAGTGTCTAAAACACCTA+TGG | 0.467982 | 7.1:-38542814 | MS.gene91571:CDS |
| CTTCTAAAACAATCTGGGTA+TGG | 0.473087 | 7.1:-38548362 | MS.gene91571:CDS |
| TAAAACACCTATGGGTCGTA+TGG | 0.479750 | 7.1:-38542805 | MS.gene91571:CDS |
| TCCGTTTATGGAGCCACAAA+AGG | 0.482063 | 7.1:-38548287 | MS.gene91571:intron |
| CGAAGAACTTAGCATTGGAA+TGG | 0.492016 | 7.1:-38545333 | MS.gene91571:CDS |
| GAAGGGGTTGAAGCTGTAGA+TGG | 0.496158 | 7.1:-38542837 | MS.gene91571:CDS |
| CTCAAACAGAATGATGATGA+AGG | 0.503335 | 7.1:-38542855 | MS.gene91571:intron |
| TGCAAGAGTGACGTCTTGAC+AGG | 0.507486 | 7.1:+38545271 | None:intergenic |
| GCTCCATAAACGGATAATAT+GGG | 0.509272 | 7.1:+38548296 | None:intergenic |
| ACGAATTAGGTACGCAATTG+TGG | 0.510984 | 7.1:-38548776 | MS.gene91571:intron |
| TGCAGCTGGAAGACAAAGAA+AGG | 0.533407 | 7.1:+38542752 | None:intergenic |
| ATTCACGAAGAACTTAGCAT+TGG | 0.539967 | 7.1:-38545338 | MS.gene91571:CDS |
| GAAGAACTTAGCATTGGAAT+GGG | 0.540363 | 7.1:-38545332 | MS.gene91571:CDS |
| AGGAAATTACCCAATGCCTC+GGG | 0.542864 | 7.1:+38549295 | None:intergenic |
| GGTATGACTGCGTTAGTGAC+GGG | 0.543235 | 7.1:-38549323 | MS.gene91571:CDS |
| AAGGAAATTACCCAATGCCT+CGG | 0.548009 | 7.1:+38549294 | None:intergenic |
| TTGGAAGAGTGGAAAAGTAA+GGG | 0.556242 | 7.1:-38548685 | MS.gene91571:CDS |
| TCAAACAGAATGATGATGAA+GGG | 0.556876 | 7.1:-38542854 | MS.gene91571:intron |
| AGTGACGTCTTGACAGGTCC+AGG | 0.559709 | 7.1:+38545277 | None:intergenic |
| ACCCTCTTCTAAAACAATCT+GGG | 0.560363 | 7.1:-38548367 | MS.gene91571:CDS |
| GCAGCTTCAAGGATAAAAGA+TGG | 0.570695 | 7.1:-38549355 | MS.gene91571:CDS |
| TGGAAGAGTGGAAAAGTAAG+GGG | 0.571177 | 7.1:-38548684 | MS.gene91571:CDS |
| AATAGCTTGTAAACCAGCAA+TGG | 0.586264 | 7.1:+38548319 | None:intergenic |
| CCAGCTGCATCATACATCAC+TGG | 0.589548 | 7.1:-38542738 | MS.gene91571:CDS |
| TGGTATGACTGCGTTAGTGA+CGG | 0.591196 | 7.1:-38549324 | MS.gene91571:CDS |
| GTAGTGTCTAAAACACCTAT+GGG | 0.593768 | 7.1:-38542813 | MS.gene91571:CDS |
| CCAGTGATGTATGATGCAGC+TGG | 0.594446 | 7.1:+38542738 | None:intergenic |
| AAAACACCTATGGGTCGTAT+GGG | 0.594881 | 7.1:-38542804 | MS.gene91571:CDS |
| GGTGTGCAAGTTGACACAAA+TGG | 0.595523 | 7.1:+38548387 | None:intergenic |
| GTCACTCTTGCAATCAATCA+GGG | 0.604928 | 7.1:-38545260 | MS.gene91571:intron |
| CAAGTTATAGCTATTGATGG+AGG | 0.616648 | 7.1:-38542714 | MS.gene91571:CDS |
| CAAACAGAATGATGATGAAG+GGG | 0.617870 | 7.1:-38542853 | MS.gene91571:intron |
| GGCTCTCCCATACGACCCAT+AGG | 0.618378 | 7.1:+38542798 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7.1:-38545302 | MS.gene91571:CDS |
| TTAGTGACGGGAGGAACCCG+AGG | 0.653929 | 7.1:-38549311 | MS.gene91571:CDS |
| ATGACTGCGTTAGTGACGGG+AGG | 0.705375 | 7.1:-38549320 | MS.gene91571:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAATTTAATATT+TGG | - | chr7.1:38544709-38544728 | MS.gene91571:intron | 0.0% |
| !! | AAAATTAAATTTCAATGATT+CGG | - | chr7.1:38543066-38543085 | MS.gene91571:intron | 10.0% |
| !! | AATTATTTACATAAAAAAAG+GGG | + | chr7.1:38542908-38542927 | None:intergenic | 10.0% |
| !! | ACAATTATTTACATAAAAAA+AGG | + | chr7.1:38542910-38542929 | None:intergenic | 10.0% |
| !! | ATAATTTAATTAGATAAAGA+AGG | - | chr7.1:38544864-38544883 | MS.gene91571:intron | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr7.1:38544291-38544310 | None:intergenic | 10.0% |
| !! | ATTTATGAAAATAAACTTAA+TGG | - | chr7.1:38549168-38549187 | MS.gene91571:intron | 10.0% |
| !! | CAATTATTTACATAAAAAAA+GGG | + | chr7.1:38542909-38542928 | None:intergenic | 10.0% |
| !! | TAATTTAATTAGATAAAGAA+GGG | - | chr7.1:38544865-38544884 | MS.gene91571:intron | 10.0% |
| !! | TAATTTACAATATTTAATAG+CGG | + | chr7.1:38545702-38545721 | None:intergenic | 10.0% |
| !! | TTATACATAAATATCTATTA+AGG | + | chr7.1:38545597-38545616 | None:intergenic | 10.0% |
| !!! | AAATTTTATTATAGAGAAAA+AGG | - | chr7.1:38546570-38546589 | MS.gene91571:intron | 10.0% |
| !!! | CTTTATTTTTATTAAATGTA+AGG | - | chr7.1:38546017-38546036 | MS.gene91571:intron | 10.0% |
| !!! | TTTTTTTATGTAAATAATTG+TGG | - | chr7.1:38542909-38542928 | MS.gene91571:intron | 10.0% |
| !! | AAAAAAGTTTCATAATTTAG+TGG | - | chr7.1:38548367-38548386 | MS.gene91571:CDS | 15.0% |
| !! | AAAATTAATTTAATTCGTAG+AGG | + | chr7.1:38547745-38547764 | None:intergenic | 15.0% |
| !! | AAAGACTATATTCATTTAAT+TGG | + | chr7.1:38543228-38543247 | None:intergenic | 15.0% |
| !! | AAATATTTATTTGGCAATAT+TGG | - | chr7.1:38545487-38545506 | MS.gene91571:intron | 15.0% |
| !! | AAATTAATTTAATTCGTAGA+GGG | + | chr7.1:38547744-38547763 | None:intergenic | 15.0% |
| !! | ACTTCAAAATAATAGTTTAA+AGG | + | chr7.1:38546644-38546663 | None:intergenic | 15.0% |
| !! | ATCAAATATGACAAATATTA+TGG | + | chr7.1:38548776-38548795 | None:intergenic | 15.0% |
| !! | ATTGTAATGTATGTATATTA+TGG | - | chr7.1:38546082-38546101 | MS.gene91571:intron | 15.0% |
| !! | CAAATTTAATTAATCAATTC+AGG | - | chr7.1:38546702-38546721 | MS.gene91571:intron | 15.0% |
| !! | GTTTATTTAACAAATTCAAT+CGG | - | chr7.1:38543040-38543059 | MS.gene91571:intron | 15.0% |
| !! | TCAAATATGACAAATATTAT+GGG | + | chr7.1:38548775-38548794 | None:intergenic | 15.0% |
| !!! | ATTCAGTTTCAAAATTTTAT+GGG | + | chr7.1:38547888-38547907 | None:intergenic | 15.0% |
| !!! | ATTTACAACATACTTTTTTT+AGG | + | chr7.1:38548254-38548273 | None:intergenic | 15.0% |
| !!! | CGAATTAAATTAATTTTAGT+TGG | - | chr7.1:38547748-38547767 | MS.gene91571:intron | 15.0% |
| !!! | GAATGAAATTAATTTTCAAA+TGG | - | chr7.1:38545119-38545138 | MS.gene91571:intron | 15.0% |
| !!! | GTTTTTCTTATGATTAATAT+AGG | + | chr7.1:38547329-38547348 | None:intergenic | 15.0% |
| !!! | TATTCAGTTTCAAAATTTTA+TGG | + | chr7.1:38547889-38547908 | None:intergenic | 15.0% |
| !!! | TTAAATTAATTTTAGTTGGA+AGG | - | chr7.1:38547752-38547771 | MS.gene91571:intron | 15.0% |
| !!! | TTATTTTTCTATTACGAATT+AGG | - | chr7.1:38543286-38543305 | MS.gene91571:intron | 15.0% |
| !!! | TTGATTATCTTTATGTTTTT+TGG | + | chr7.1:38547259-38547278 | None:intergenic | 15.0% |
| !!! | TTTTATGTTGTTTTTCTTTT+AGG | - | chr7.1:38543571-38543590 | MS.gene91571:intron | 15.0% |
| !!! | TTTTTTTTAAATCTTATCCA+TGG | - | chr7.1:38546171-38546190 | MS.gene91571:intron | 15.0% |
| !! | AAAAAAAAAAACTCAGTATC+CGG | - | chr7.1:38548450-38548469 | MS.gene91571:CDS | 20.0% |
| !! | AAAAATATACTGCAAATTGT+GGG | - | chr7.1:38548280-38548299 | MS.gene91571:intron | 20.0% |
| !! | AAAATTAATTTAATTCGGAG+AGG | + | chr7.1:38547700-38547719 | None:intergenic | 20.0% |
| !! | AAAGAAGAAATTAACATCTT+TGG | - | chr7.1:38548001-38548020 | MS.gene91571:intron | 20.0% |
| !! | AAATTAATTTAATTCGGAGA+GGG | + | chr7.1:38547699-38547718 | None:intergenic | 20.0% |
| !! | AATTAATTTAATTCGTAGAG+GGG | + | chr7.1:38547743-38547762 | None:intergenic | 20.0% |
| !! | ACAAAATTTAAACATTTGAG+AGG | - | chr7.1:38547291-38547310 | MS.gene91571:intron | 20.0% |
| !! | ACAATACATAATTTATGCAA+TGG | + | chr7.1:38545430-38545449 | None:intergenic | 20.0% |
| !! | ACAATTAAATGTGAAGAAAT+GGG | - | chr7.1:38545388-38545407 | MS.gene91571:intron | 20.0% |
| !! | ACATTTCCTTTATCTTTATT+TGG | + | chr7.1:38544555-38544574 | None:intergenic | 20.0% |
| !! | AGAAGATATTAACAAATGTT+TGG | - | chr7.1:38543371-38543390 | MS.gene91571:intron | 20.0% |
| !! | CAATACATAATTTATGCAAT+GGG | + | chr7.1:38545429-38545448 | None:intergenic | 20.0% |
| !! | CGCCTAAAATTAATTTAATT+CGG | + | chr7.1:38547705-38547724 | None:intergenic | 20.0% |
| !! | TACAATTAAATGTGAAGAAA+TGG | - | chr7.1:38545387-38545406 | MS.gene91571:intron | 20.0% |
| !! | TAGCATATTCATATATTTCA+GGG | - | chr7.1:38544108-38544127 | MS.gene91571:intron | 20.0% |
| !! | TGTTATTAAGAGTTAAGATA+AGG | + | chr7.1:38542803-38542822 | None:intergenic | 20.0% |
| !! | TTAGCATATTCATATATTTC+AGG | - | chr7.1:38544107-38544126 | MS.gene91571:intron | 20.0% |
| !! | TTTCTTATGATTAATATAGG+TGG | + | chr7.1:38547326-38547345 | None:intergenic | 20.0% |
| !! | TTTGTATTGAAAAATGAAGA+AGG | + | chr7.1:38544899-38544918 | None:intergenic | 20.0% |
| !!! | AAAACTATTTTTTGCAAATG+TGG | - | chr7.1:38549013-38549032 | MS.gene91571:intron | 20.0% |
| !!! | AATTAAATTAATTTTAGGCG+GGG | - | chr7.1:38547705-38547724 | MS.gene91571:intron | 20.0% |
| !!! | ATCTATATCGATTAATTAGT+GGG | + | chr7.1:38545641-38545660 | None:intergenic | 20.0% |
| !!! | ATGATTAAGTTTAAAGTTCA+TGG | + | chr7.1:38547351-38547370 | None:intergenic | 20.0% |
| !!! | CGAATTAAATTAATTTTAGG+CGG | - | chr7.1:38547703-38547722 | MS.gene91571:intron | 20.0% |
| !!! | CGTTTCATTGATTAAAAAAT+AGG | - | chr7.1:38543813-38543832 | MS.gene91571:intron | 20.0% |
| !!! | CTCCGAATTAAATTAATTTT+AGG | - | chr7.1:38547700-38547719 | MS.gene91571:intron | 20.0% |
| !!! | GAAACTTTTTTATAGTACAA+CGG | + | chr7.1:38548358-38548377 | None:intergenic | 20.0% |
| !!! | GAATTAAATTAATTTTAGGC+GGG | - | chr7.1:38547704-38547723 | MS.gene91571:intron | 20.0% |
| !!! | GAGATTTTATTTTCAAACTA+TGG | - | chr7.1:38549072-38549091 | MS.gene91571:intron | 20.0% |
| !!! | TAATATCCATTTTAACAGAA+AGG | - | chr7.1:38545287-38545306 | MS.gene91571:CDS | 20.0% |
| !!! | TATACAATAATTGATGATGT+GGG | + | chr7.1:38544993-38545012 | None:intergenic | 20.0% |
| !!! | TATCTTTATGTTTTTTGGTT+TGG | + | chr7.1:38547254-38547273 | None:intergenic | 20.0% |
| !!! | TCTTCATTTTTCAATACAAA+TGG | - | chr7.1:38544899-38544918 | MS.gene91571:intron | 20.0% |
| !!! | TTAAGTAATTAAATTTTGGC+AGG | + | chr7.1:38543921-38543940 | None:intergenic | 20.0% |
| !!! | TTATACAATAATTGATGATG+TGG | + | chr7.1:38544994-38545013 | None:intergenic | 20.0% |
| !!! | TTTAGGTTACAATTTTCAAA+AGG | - | chr7.1:38545156-38545175 | MS.gene91571:intron | 20.0% |
| !!! | TTTTAATATGAACCCAAAAA+TGG | - | chr7.1:38546508-38546527 | MS.gene91571:intron | 20.0% |
| !!! | TTTTCGATATCAATTTTAGT+GGG | + | chr7.1:38548554-38548573 | None:intergenic | 20.0% |
| !!! | TTTTTGAAATTTTTCCGTAT+CGG | + | chr7.1:38544198-38544217 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTCTGTTGT+TGG | + | chr7.1:38547610-38547629 | None:intergenic | 20.0% |
| ! | AAAATATACTGCAAATTGTG+GGG | - | chr7.1:38548281-38548300 | MS.gene91571:intron | 25.0% |
| ! | AAACCCTAATTTCTTAGAAA+GGG | - | chr7.1:38544485-38544504 | MS.gene91571:intron | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr7.1:38547022-38547041 | None:intergenic | 25.0% |
| ! | AATTAATTTAATTCGGAGAG+GGG | + | chr7.1:38547698-38547717 | None:intergenic | 25.0% |
| ! | ACTCTATTGAATCATTGATA+AGG | - | chr7.1:38548143-38548162 | MS.gene91571:intron | 25.0% |
| ! | AGAAAAAAAAAAAACTCGGA+TGG | + | chr7.1:38548394-38548413 | None:intergenic | 25.0% |
| ! | AGCCAGAAAAAAAAAAAACT+CGG | + | chr7.1:38548398-38548417 | None:intergenic | 25.0% |
| ! | ATCGATTGAAATATTCATGT+TGG | + | chr7.1:38543110-38543129 | None:intergenic | 25.0% |
| ! | ATTGTAGGAATAAAATCTCA+AGG | - | chr7.1:38549041-38549060 | MS.gene91571:intron | 25.0% |
| ! | CAATTAAATGTGAAGAAATG+GGG | - | chr7.1:38545389-38545408 | MS.gene91571:intron | 25.0% |
| ! | CACAAAGACAATAAACAAAA+CGG | + | chr7.1:38542989-38543008 | None:intergenic | 25.0% |
| ! | CAGTTGACAAAACAATATAA+AGG | + | chr7.1:38548318-38548337 | None:intergenic | 25.0% |
| ! | CTAATTAATCGATATAGATG+CGG | - | chr7.1:38545642-38545661 | MS.gene91571:intron | 25.0% |
| ! | GAAAAAAAAAAAACTCGGAT+GGG | + | chr7.1:38548393-38548412 | None:intergenic | 25.0% |
| ! | GAAAAATATACTGCAAATTG+TGG | - | chr7.1:38548279-38548298 | MS.gene91571:intron | 25.0% |
| ! | GAAGATATAAACACTACAAT+TGG | - | chr7.1:38543644-38543663 | MS.gene91571:intron | 25.0% |
| ! | GTGGTTTCTATATAGATATA+TGG | - | chr7.1:38542928-38542947 | MS.gene91571:intron | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr7.1:38544211-38544230 | MS.gene91571:intron | 25.0% |
| ! | TCATAAGACAATAGTCAATT+GGG | + | chr7.1:38549130-38549149 | None:intergenic | 25.0% |
| ! | TCATACTCTTAAGATAAGAT+AGG | + | chr7.1:38546403-38546422 | None:intergenic | 25.0% |
| ! | TCGATTGAAATATTCATGTT+GGG | + | chr7.1:38543109-38543128 | None:intergenic | 25.0% |
| ! | TGCACATAACATTCATTAAA+GGG | - | chr7.1:38548929-38548948 | MS.gene91571:intron | 25.0% |
| ! | TGGTTGAATTGAAATACTTT+AGG | - | chr7.1:38545139-38545158 | MS.gene91571:intron | 25.0% |
| ! | TTAATTAATCAATTCAGGAG+CGG | - | chr7.1:38546707-38546726 | MS.gene91571:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr7.1:38547034-38547053 | MS.gene91571:intron | 25.0% |
| ! | TTCTTCTTTGTAATTCATTG+TGG | - | chr7.1:38545188-38545207 | MS.gene91571:intron | 25.0% |
| ! | TTGACAAAACAATATAAAGG+AGG | + | chr7.1:38548315-38548334 | None:intergenic | 25.0% |
| ! | TTGAGAATATACAATAGTCA+AGG | - | chr7.1:38547195-38547214 | MS.gene91571:intron | 25.0% |
| ! | TTGCACATAACATTCATTAA+AGG | - | chr7.1:38548928-38548947 | MS.gene91571:intron | 25.0% |
| ! | TTTAATATTTGGATACTCTC+TGG | - | chr7.1:38544720-38544739 | MS.gene91571:intron | 25.0% |
| ! | TTTCATGTTGTACATATGAA+GGG | - | chr7.1:38548172-38548191 | MS.gene91571:intron | 25.0% |
| !! | AAGATTGTCTTGATTTGATT+TGG | + | chr7.1:38547474-38547493 | None:intergenic | 25.0% |
| !! | AGAAATTAACATCTTTGGAA+AGG | - | chr7.1:38548006-38548025 | MS.gene91571:intron | 25.0% |
| !! | ATCTATTATTTTCTTCGAGA+GGG | + | chr7.1:38543615-38543634 | None:intergenic | 25.0% |
| !! | ATTGTTTCTTCTATCTTTCA+CGG | - | chr7.1:38543477-38543496 | MS.gene91571:intron | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | + | chr7.1:38545642-38545661 | None:intergenic | 25.0% |
| !! | CTTTTCGATATCAATTTTAG+TGG | + | chr7.1:38548555-38548574 | None:intergenic | 25.0% |
| !! | GAAATTAACATCTTTGGAAA+GGG | - | chr7.1:38548007-38548026 | MS.gene91571:intron | 25.0% |
| !! | GTGGTTTTCTTTACTATTTT+TGG | - | chr7.1:38546538-38546557 | MS.gene91571:intron | 25.0% |
| !! | TATCTATTATTTTCTTCGAG+AGG | + | chr7.1:38543616-38543635 | None:intergenic | 25.0% |
| !! | TTCAAGTTACTCTATACAAA+GGG | - | chr7.1:38547830-38547849 | MS.gene91571:intron | 25.0% |
| !! | TTTCCCTTTCTAAGAAATTA+GGG | + | chr7.1:38544491-38544510 | None:intergenic | 25.0% |
| !! | TTTTCATGTTGTACATATGA+AGG | - | chr7.1:38548171-38548190 | MS.gene91571:intron | 25.0% |
| !!! | AAATACAACGTTTTTTAGAG+TGG | + | chr7.1:38543183-38543202 | None:intergenic | 25.0% |
| !!! | AACCACTTTTTGACAATTTT+TGG | + | chr7.1:38547119-38547138 | None:intergenic | 25.0% |
| !!! | ACAATATTTAATAGCGGATA+TGG | + | chr7.1:38545696-38545715 | None:intergenic | 25.0% |
| !!! | ATCCGAGTTTTTTTTTTTTC+TGG | - | chr7.1:38548393-38548412 | MS.gene91571:CDS | 25.0% |
| !!! | GACGGATTAATAATAGTTTA+AGG | - | chr7.1:38544079-38544098 | MS.gene91571:intron | 25.0% |
| !!! | GCTTAGATAGTTTAATTTTG+TGG | + | chr7.1:38546683-38546702 | None:intergenic | 25.0% |
| !!! | TAGGAAGTTGAAAAGTATTA+AGG | + | chr7.1:38545734-38545753 | None:intergenic | 25.0% |
| !!! | TATTACACTCCTTTTTTTTG+TGG | - | chr7.1:38545811-38545830 | MS.gene91571:intron | 25.0% |
| !!! | TCAAAAAGAGTATCACTTTT+AGG | + | chr7.1:38548991-38549010 | None:intergenic | 25.0% |
| !!! | TTATTTAGTTTGACTCACAA+AGG | - | chr7.1:38545239-38545258 | MS.gene91571:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr7.1:38547021-38547040 | MS.gene91571:intron | 25.0% |
| !!! | TTTAATTTGAGCACTTAGAA+AGG | + | chr7.1:38543540-38543559 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTACTCTATACAA+AGG | - | chr7.1:38547829-38547848 | MS.gene91571:intron | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr7.1:38547047-38547066 | MS.gene91571:intron | 30.0% | |
| ACTAGTGATGATATCTCTTT+AGG | + | chr7.1:38549301-38549320 | None:intergenic | 30.0% | |
| ATTAACAAACACAAGAAACC+AGG | - | chr7.1:38544311-38544330 | MS.gene91571:intron | 30.0% | |
| ATTAGATAAAGAAGGGAGTT+CGG | - | chr7.1:38544872-38544891 | MS.gene91571:intron | 30.0% | |
| ATTCCCATATTATCCGTTTA+TGG | - | chr7.1:38543776-38543795 | MS.gene91571:intron | 30.0% | |
| CGGATTTCATATTTATCGAA+CGG | - | chr7.1:38546273-38546292 | MS.gene91571:intron | 30.0% | |
| CTCATAAGACAATAGTCAAT+TGG | + | chr7.1:38549131-38549150 | None:intergenic | 30.0% | |
| CTTAAAAGAACACAACATTG+TGG | + | chr7.1:38545056-38545075 | None:intergenic | 30.0% | |
| GAAACCCTAATTTCTTAGAA+AGG | - | chr7.1:38544484-38544503 | MS.gene91571:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr7.1:38545859-38545878 | None:intergenic | 30.0% | |
| GATAAAAGATGGTCACTATA+TGG | - | chr7.1:38542731-38542750 | MS.gene91571:CDS | 30.0% | |
| GTCCAAAAATTGTCAAAAAG+TGG | - | chr7.1:38547114-38547133 | MS.gene91571:intron | 30.0% | |
| TAATAACACTCACAACACTA+AGG | + | chr7.1:38545766-38545785 | None:intergenic | 30.0% | |
| TATCAAATGAGCTAAACTCA+CGG | - | chr7.1:38545452-38545471 | MS.gene91571:intron | 30.0% | |
| TGAACCCAAAAATGGTTTAA+AGG | - | chr7.1:38546516-38546535 | MS.gene91571:intron | 30.0% | |
| TGAAGATTTCATTGTTTGTG+TGG | + | chr7.1:38547795-38547814 | None:intergenic | 30.0% | |
| TGACAAATATTATGGGAAGT+AGG | + | chr7.1:38548768-38548787 | None:intergenic | 30.0% | |
| TGCAGAGTGAAAAATAACTT+TGG | - | chr7.1:38548893-38548912 | MS.gene91571:intron | 30.0% | |
| TGCATAATATATGCAAGGTT+CGG | + | chr7.1:38545854-38545873 | None:intergenic | 30.0% | |
| TGTCAGGAATAAAGAATACA+AGG | + | chr7.1:38543892-38543911 | None:intergenic | 30.0% | |
| TGTTTGTAATTACAGTGATG+TGG | + | chr7.1:38543972-38543991 | None:intergenic | 30.0% | |
| TTAACAAATGTTTGGAAGAG+TGG | - | chr7.1:38543379-38543398 | MS.gene91571:intron | 30.0% | |
| TTTATAGTACAACGGTTGAT+TGG | + | chr7.1:38548350-38548369 | None:intergenic | 30.0% | |
| TTTGTAATTCATTGTGGAGA+AGG | - | chr7.1:38545194-38545213 | MS.gene91571:intron | 30.0% | |
| ! | AACCACCTTTAAACCATTTT+TGG | + | chr7.1:38546524-38546543 | None:intergenic | 30.0% |
| ! | AGGGAATGACTTTGATAATA+CGG | - | chr7.1:38547975-38547994 | MS.gene91571:intron | 30.0% |
| ! | AGGTTACAATTTTCAAAAGG+TGG | - | chr7.1:38545159-38545178 | MS.gene91571:intron | 30.0% |
| ! | ATTGGTACAAATTTTGTGTC+TGG | - | chr7.1:38543662-38543681 | MS.gene91571:intron | 30.0% |
| ! | ATTTTTGTCAACTAACCTAG+TGG | - | chr7.1:38545354-38545373 | MS.gene91571:CDS | 30.0% |
| ! | CAATGTTGTGTTCTTTTAAG+TGG | - | chr7.1:38545056-38545075 | MS.gene91571:intron | 30.0% |
| ! | CTTTCCCTTTCTAAGAAATT+AGG | + | chr7.1:38544492-38544511 | None:intergenic | 30.0% |
| ! | TCAAACAGAATGATGATGAA+GGG | - | chr7.1:38549221-38549240 | MS.gene91571:intron | 30.0% |
| ! | TCTATTATTTTCTTCGAGAG+GGG | + | chr7.1:38543614-38543633 | None:intergenic | 30.0% |
| !! | ACCACCTTTAAACCATTTTT+GGG | + | chr7.1:38546523-38546542 | None:intergenic | 30.0% |
| !! | TATTTGGCAATATTGGTTCA+TGG | - | chr7.1:38545494-38545513 | MS.gene91571:intron | 30.0% |
| !! | TTCAACTTTTTCTTCCAAAG+TGG | + | chr7.1:38544467-38544486 | None:intergenic | 30.0% |
| !!! | AACACTAAGGTTTTTTGCTT+AGG | + | chr7.1:38545753-38545772 | None:intergenic | 30.0% |
| !!! | AGCAAGAAACTTTGTTTTTG+TGG | - | chr7.1:38545955-38545974 | MS.gene91571:intron | 30.0% |
| !!! | ATAGATTTTGAGATATCCAC+GGG | + | chr7.1:38546209-38546228 | None:intergenic | 30.0% |
| !!! | CATAGATTTTGAGATATCCA+CGG | + | chr7.1:38546210-38546229 | None:intergenic | 30.0% |
| !!! | CTTGCTTTTTAGAGATTTCA+GGG | + | chr7.1:38544025-38544044 | None:intergenic | 30.0% |
| !!! | CTTTATGTTTTTTGGTTTGG+TGG | + | chr7.1:38547251-38547270 | None:intergenic | 30.0% |
| !!! | TCTTGCTTTTTAGAGATTTC+AGG | + | chr7.1:38544026-38544045 | None:intergenic | 30.0% |
| AAAGGTGACGAACATATAAG+AGG | - | chr7.1:38545305-38545324 | MS.gene91571:CDS | 35.0% | |
| AACAAAGTTAAGCAGCTTCA+AGG | - | chr7.1:38542709-38542728 | MS.gene91571:CDS | 35.0% | |
| ACCCAAAAATGGTTTAAAGG+TGG | - | chr7.1:38546519-38546538 | MS.gene91571:intron | 35.0% | |
| ACGCTGATATGGATAGAATA+CGG | - | chr7.1:38546253-38546272 | MS.gene91571:intron | 35.0% | |
| AGAGTTTAGAGAATGTACGA+GGG | - | chr7.1:38547956-38547975 | MS.gene91571:intron | 35.0% | |
| AGATTTCAGGGACTAATTAC+AGG | + | chr7.1:38544013-38544032 | None:intergenic | 35.0% | |
| AGTAAGGGGTTTAATGTAAC+AGG | - | chr7.1:38543405-38543424 | MS.gene91571:intron | 35.0% | |
| AGTTGTGGTGACAACTTTAA+AGG | - | chr7.1:38548032-38548051 | MS.gene91571:intron | 35.0% | |
| ATCAAATGAGCTAAACTCAC+GGG | - | chr7.1:38545453-38545472 | MS.gene91571:intron | 35.0% | |
| ATGAAACTTTAGACTTTGCG+AGG | - | chr7.1:38548576-38548595 | MS.gene91571:intron | 35.0% | |
| ATTCACGAAGAACTTAGCAT+TGG | - | chr7.1:38546737-38546756 | MS.gene91571:intron | 35.0% | |
| ATTTCAGGGACTAATTACAG+GGG | + | chr7.1:38544011-38544030 | None:intergenic | 35.0% | |
| CAAGTTATAGCTATTGATGG+AGG | - | chr7.1:38549361-38549380 | MS.gene91571:CDS | 35.0% | |
| CATAATATATGCAAGGTTCG+GGG | + | chr7.1:38545852-38545871 | None:intergenic | 35.0% | |
| CATTTCTACGCTTCTACTTA+GGG | + | chr7.1:38546348-38546367 | None:intergenic | 35.0% | |
| CGATATAGATGCGGATTTAA+TGG | - | chr7.1:38545651-38545670 | MS.gene91571:intron | 35.0% | |
| CGTGGATATCTCAAAATCTA+TGG | - | chr7.1:38546208-38546227 | MS.gene91571:intron | 35.0% | |
| CTGGCACCAAATAAAGATAA+AGG | - | chr7.1:38544546-38544565 | MS.gene91571:intron | 35.0% | |
| CTGTATTACGCTCCTTTAAA+AGG | - | chr7.1:38545907-38545926 | MS.gene91571:intron | 35.0% | |
| CTTCTACTTAGGGATGTAAA+AGG | + | chr7.1:38546338-38546357 | None:intergenic | 35.0% | |
| GAAAGATGCAATTGTTTGTG+TGG | - | chr7.1:38544507-38544526 | MS.gene91571:intron | 35.0% | |
| GATTTCAGGGACTAATTACA+GGG | + | chr7.1:38544012-38544031 | None:intergenic | 35.0% | |
| GCAAATGTGGCAAATATTGT+AGG | - | chr7.1:38549026-38549045 | MS.gene91571:intron | 35.0% | |
| GCATAATATATGCAAGGTTC+GGG | + | chr7.1:38545853-38545872 | None:intergenic | 35.0% | |
| GCTCCATAAACGGATAATAT+GGG | + | chr7.1:38543782-38543801 | None:intergenic | 35.0% | |
| GGACAAGTTATAGCTATTGA+TGG | - | chr7.1:38549358-38549377 | MS.gene91571:CDS | 35.0% | |
| GTGATTACCGAAAAATCACA+TGG | - | chr7.1:38547413-38547432 | MS.gene91571:intron | 35.0% | |
| GTGTTTAGACACTGCAAATA+GGG | - | chr7.1:38543849-38543868 | MS.gene91571:intron | 35.0% | |
| GTTGTGGTGACAACTTTAAA+GGG | - | chr7.1:38548033-38548052 | MS.gene91571:intron | 35.0% | |
| TAAAAGGTAGTGAAAGTGGT+CGG | - | chr7.1:38545923-38545942 | MS.gene91571:intron | 35.0% | |
| TAATATTCGTGCAAATGCTG+TGG | - | chr7.1:38546773-38546792 | MS.gene91571:intron | 35.0% | |
| TAGTTTGACTCACAAAGGTT+TGG | - | chr7.1:38545244-38545263 | MS.gene91571:intron | 35.0% | |
| TCATTTCTACGCTTCTACTT+AGG | + | chr7.1:38546349-38546368 | None:intergenic | 35.0% | |
| TCGTCACCTTTCTGTTAAAA+TGG | + | chr7.1:38545296-38545315 | None:intergenic | 35.0% | |
| TCTAAAGATCGACTAATCCA+AGG | - | chr7.1:38548473-38548492 | MS.gene91571:CDS | 35.0% | |
| TCTCAAACAAACCCTAATTG+TGG | + | chr7.1:38547939-38547958 | None:intergenic | 35.0% | |
| TGAACAACGCAAGAAACTAA+TGG | - | chr7.1:38543452-38543471 | MS.gene91571:intron | 35.0% | |
| TGTGTTTAGACACTGCAAAT+AGG | - | chr7.1:38543848-38543867 | MS.gene91571:intron | 35.0% | |
| TGTTTAGACACTGCAAATAG+GGG | - | chr7.1:38543850-38543869 | MS.gene91571:intron | 35.0% | |
| TTACTTCCTTCCACACAAAA+AGG | - | chr7.1:38547655-38547674 | MS.gene91571:intron | 35.0% | |
| TTGGAAGAGTGGAAAAGTAA+GGG | - | chr7.1:38543390-38543409 | MS.gene91571:intron | 35.0% | |
| TTTGGAAGAGTGGAAAAGTA+AGG | - | chr7.1:38543389-38543408 | MS.gene91571:intron | 35.0% | |
| ! | AATAGCTTGTAAACCAGCAA+TGG | + | chr7.1:38543759-38543778 | None:intergenic | 35.0% |
| ! | ATGTGAAGAAATGGGGTATT+TGG | - | chr7.1:38545396-38545415 | MS.gene91571:intron | 35.0% |
| ! | ATTGGTTCATGGTAAGAGTA+GGG | - | chr7.1:38545505-38545524 | MS.gene91571:intron | 35.0% |
| ! | ATTTTATCCACGGATATCCA+CGG | + | chr7.1:38545551-38545570 | None:intergenic | 35.0% |
| ! | CAAACAGAATGATGATGAAG+GGG | - | chr7.1:38549222-38549241 | MS.gene91571:intron | 35.0% |
| ! | CCACTTTCACTACCTTTTAA+AGG | + | chr7.1:38545922-38545941 | None:intergenic | 35.0% |
| ! | CCTTTAAAAGGTAGTGAAAG+TGG | - | chr7.1:38545919-38545938 | MS.gene91571:intron | 35.0% |
| ! | CTCAAACAGAATGATGATGA+AGG | - | chr7.1:38549220-38549239 | MS.gene91571:intron | 35.0% |
| ! | GAAGAACTTAGCATTGGAAT+GGG | - | chr7.1:38546743-38546762 | MS.gene91571:intron | 35.0% |
| ! | GTAGTGTCTAAAACACCTAT+GGG | - | chr7.1:38549262-38549281 | MS.gene91571:intron | 35.0% |
| ! | GTGAGTTTAGCTCATTTGAT+AGG | + | chr7.1:38545453-38545472 | None:intergenic | 35.0% |
| ! | GTTCTGTTGTTGGTAGATTA+TGG | + | chr7.1:38547600-38547619 | None:intergenic | 35.0% |
| ! | TCAATGAAACGTACCTTTTG+TGG | + | chr7.1:38543804-38543823 | None:intergenic | 35.0% |
| ! | TCTATGGATTATCCGCTAAA+CGG | - | chr7.1:38546224-38546243 | MS.gene91571:intron | 35.0% |
| ! | TGTAGTGTCTAAAACACCTA+TGG | - | chr7.1:38549261-38549280 | MS.gene91571:intron | 35.0% |
| ! | TGTGAAGAAATGGGGTATTT+GGG | - | chr7.1:38545397-38545416 | MS.gene91571:intron | 35.0% |
| !! | ACCCTCTTCTAAAACAATCT+GGG | - | chr7.1:38543708-38543727 | MS.gene91571:intron | 35.0% |
| !! | CGATATCAATTTTAGTGGGT+TGG | + | chr7.1:38548550-38548569 | None:intergenic | 35.0% |
| !! | CTTCTAAAACAATCTGGGTA+TGG | - | chr7.1:38543713-38543732 | MS.gene91571:intron | 35.0% |
| !! | GTGACAACTTTAAAGGGTTT+TGG | - | chr7.1:38548039-38548058 | MS.gene91571:intron | 35.0% |
| !! | TATTGGTTCATGGTAAGAGT+AGG | - | chr7.1:38545504-38545523 | MS.gene91571:intron | 35.0% |
| !! | TTTATAGGGTTGGTATCTCA+TGG | + | chr7.1:38547508-38547527 | None:intergenic | 35.0% |
| !!! | ACCCAGATTGTTTTAGAAGA+GGG | + | chr7.1:38543712-38543731 | None:intergenic | 35.0% |
| !!! | CGTCATCCATTTTGAAGTAT+CGG | - | chr7.1:38544800-38544819 | MS.gene91571:intron | 35.0% |
| !!! | GTCATCCATTTTGAAGTATC+GGG | - | chr7.1:38544801-38544820 | MS.gene91571:intron | 35.0% |
| !!! | TACACTCCTTTTTTTTGTGG+TGG | - | chr7.1:38545814-38545833 | MS.gene91571:intron | 35.0% |
| !!! | TACCCAGATTGTTTTAGAAG+AGG | + | chr7.1:38543713-38543732 | None:intergenic | 35.0% |
| !!! | TCATCCATTTTGAAGTATCG+GGG | - | chr7.1:38544802-38544821 | MS.gene91571:intron | 35.0% |
| AAAACACCTATGGGTCGTAT+GGG | - | chr7.1:38549271-38549290 | MS.gene91571:intron | 40.0% | |
| AAGCTTCCAACTCCACAATT+AGG | - | chr7.1:38547924-38547943 | MS.gene91571:intron | 40.0% | |
| AAGGAAATTACCCAATGCCT+CGG | + | chr7.1:38542784-38542803 | None:intergenic | 40.0% | |
| AATTGCACCACGTGACAAAA+AGG | - | chr7.1:38547526-38547545 | MS.gene91571:intron | 40.0% | |
| ACAAACCCTAATTGTGGAGT+TGG | + | chr7.1:38547933-38547952 | None:intergenic | 40.0% | |
| ACACAAGTATCCGTGTGTAT+CGG | - | chr7.1:38544652-38544671 | MS.gene91571:intron | 40.0% | |
| ACGAATTAGGTACGCAATTG+TGG | - | chr7.1:38543299-38543318 | MS.gene91571:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr7.1:38547057-38547076 | MS.gene91571:intron | 40.0% | |
| AGCTTCCAACTCCACAATTA+GGG | - | chr7.1:38547925-38547944 | MS.gene91571:intron | 40.0% | |
| ATACTCTCTGGATACGTATC+GGG | - | chr7.1:38544732-38544751 | MS.gene91571:intron | 40.0% | |
| ATAGTACAACGGTTGATTGG+AGG | + | chr7.1:38548347-38548366 | None:intergenic | 40.0% | |
| ATGCAATTGTTTGTGTGGTG+TGG | - | chr7.1:38544512-38544531 | MS.gene91571:intron | 40.0% | |
| GAGAGTTTAGAGAATGTACG+AGG | - | chr7.1:38547955-38547974 | MS.gene91571:intron | 40.0% | |
| GATACTCTCTGGATACGTAT+CGG | - | chr7.1:38544731-38544750 | MS.gene91571:intron | 40.0% | |
| GATTATGTATGTCAGCACAG+TGG | + | chr7.1:38548424-38548443 | None:intergenic | 40.0% | |
| GCAGCTTCAAGGATAAAAGA+TGG | - | chr7.1:38542720-38542739 | MS.gene91571:CDS | 40.0% | |
| GGATTTAATGGTATCTGCAC+CGG | - | chr7.1:38545663-38545682 | MS.gene91571:intron | 40.0% | |
| GGCTCCATAAACGGATAATA+TGG | + | chr7.1:38543783-38543802 | None:intergenic | 40.0% | |
| GGCTGCGATTCTTCTAAATT+GGG | - | chr7.1:38547434-38547453 | MS.gene91571:intron | 40.0% | |
| GGGATGTAAAAGGATATCCA+TGG | + | chr7.1:38546328-38546347 | None:intergenic | 40.0% | |
| GTATTCTATCCATATCAGCG+TGG | + | chr7.1:38546254-38546273 | None:intergenic | 40.0% | |
| GTCACGTGGTGCAATTTATA+GGG | + | chr7.1:38547522-38547541 | None:intergenic | 40.0% | |
| GTCACTCTTGCAATCAATCA+GGG | - | chr7.1:38546815-38546834 | MS.gene91571:intron | 40.0% | |
| GTGATGTGGCAGTAATTAAC+TGG | + | chr7.1:38543958-38543977 | None:intergenic | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | - | chr7.1:38543318-38543337 | MS.gene91571:intron | 40.0% | |
| TAAAACACCTATGGGTCGTA+TGG | - | chr7.1:38549270-38549289 | MS.gene91571:intron | 40.0% | |
| TATCACACTATCTGCATCCA+TGG | - | chr7.1:38546308-38546327 | MS.gene91571:intron | 40.0% | |
| TCAAATGAGCTAAACTCACG+GGG | - | chr7.1:38545454-38545473 | MS.gene91571:intron | 40.0% | |
| TCATTGTGGAGAAGGAAGAA+TGG | - | chr7.1:38545202-38545221 | MS.gene91571:intron | 40.0% | |
| TGGAAGAGTGGAAAAGTAAG+GGG | - | chr7.1:38543391-38543410 | MS.gene91571:intron | 40.0% | |
| TGGCAGTAATTAACTGGAGA+GGG | + | chr7.1:38543952-38543971 | None:intergenic | 40.0% | |
| TGGCTGCGATTCTTCTAAAT+TGG | - | chr7.1:38547433-38547452 | MS.gene91571:intron | 40.0% | |
| TGGGTTCAAGACTTCTTTGA+CGG | - | chr7.1:38544061-38544080 | MS.gene91571:intron | 40.0% | |
| TGTCACGTGGTGCAATTTAT+AGG | + | chr7.1:38547523-38547542 | None:intergenic | 40.0% | |
| TTATGGTCAGGTGTTCATCT+TGG | + | chr7.1:38547583-38547602 | None:intergenic | 40.0% | |
| TTCCTTCCACACAAAAAGGT+GGG | - | chr7.1:38547659-38547678 | MS.gene91571:intron | 40.0% | |
| ! | AAGAGAGTGCAGTGAATGTT+GGG | - | chr7.1:38544042-38544061 | MS.gene91571:intron | 40.0% |
| ! | ACCTTTTGTGGCTCCATAAA+CGG | + | chr7.1:38543792-38543811 | None:intergenic | 40.0% |
| ! | ATCGCAGCCATGTGATTTTT+CGG | + | chr7.1:38547423-38547442 | None:intergenic | 40.0% |
| ! | CAAACTATGGACTGTGTGTT+TGG | - | chr7.1:38549085-38549104 | MS.gene91571:intron | 40.0% |
| ! | CGAAGAACTTAGCATTGGAA+TGG | - | chr7.1:38546742-38546761 | MS.gene91571:intron | 40.0% |
| ! | GTGAAGAAATGGGGTATTTG+GGG | - | chr7.1:38545398-38545417 | MS.gene91571:intron | 40.0% |
| ! | GTTGTTGGTAGATTATGGTC+AGG | + | chr7.1:38547595-38547614 | None:intergenic | 40.0% |
| ! | GTTTGGTGGCTATGTTTGTT+TGG | + | chr7.1:38547237-38547256 | None:intergenic | 40.0% |
| ! | TAGCGGATATGGATATCTAC+CGG | + | chr7.1:38545685-38545704 | None:intergenic | 40.0% |
| ! | TTGTATGAGCTCTAACCACT+AGG | + | chr7.1:38545372-38545391 | None:intergenic | 40.0% |
| ! | TTTAACCCCACCTTTTTGTG+TGG | + | chr7.1:38547668-38547687 | None:intergenic | 40.0% |
| ! | TTTTATCCACGGATATCCAC+GGG | + | chr7.1:38545550-38545569 | None:intergenic | 40.0% |
| ! | TTTTGGCAGGACAAAATGTC+AGG | + | chr7.1:38543908-38543927 | None:intergenic | 40.0% |
| !! | AAAGGTTTGGTGTACTTGGT+TGG | - | chr7.1:38545257-38545276 | MS.gene91571:intron | 40.0% |
| !! | ATTTTTCCGTATCGGCGTAT+CGG | + | chr7.1:38544190-38544209 | None:intergenic | 40.0% |
| !! | CACCCTCTTCTAAAACAATC+TGG | - | chr7.1:38543707-38543726 | MS.gene91571:intron | 40.0% |
| !! | CCACTGCTCTGAAAAAACAA+AGG | + | chr7.1:38546374-38546393 | None:intergenic | 40.0% |
| !! | GGATTAGTCGATCTTTAGAC+CGG | + | chr7.1:38548472-38548491 | None:intergenic | 40.0% |
| !! | TCACAAAGGTTTGGTGTACT+TGG | - | chr7.1:38545253-38545272 | MS.gene91571:intron | 40.0% |
| !!! | CCTTTGTTTTTTCAGAGCAG+TGG | - | chr7.1:38546371-38546390 | MS.gene91571:intron | 40.0% |
| AACGGATATCCACGCTGATA+TGG | - | chr7.1:38546242-38546261 | MS.gene91571:intron | 45.0% | |
| ACGGGTTTATGCAGATACCA+TGG | + | chr7.1:38546191-38546210 | None:intergenic | 45.0% | |
| AGGAAATTACCCAATGCCTC+GGG | + | chr7.1:38542783-38542802 | None:intergenic | 45.0% | |
| ATGGTATCTGCATAAACCCG+TGG | - | chr7.1:38546190-38546209 | MS.gene91571:intron | 45.0% | |
| ATGTGGGATCCACTAAGTGT+AGG | + | chr7.1:38544977-38544996 | None:intergenic | 45.0% | |
| ATGTTAATGTGCTACGAGCC+TGG | + | chr7.1:38544332-38544351 | None:intergenic | 45.0% | |
| ATTGTTTGTGTGGTGTGGTG+TGG | - | chr7.1:38544517-38544536 | MS.gene91571:intron | 45.0% | |
| CACAAGTATCCGTGTGTATC+GGG | - | chr7.1:38544653-38544672 | MS.gene91571:intron | 45.0% | |
| CCTCGACCACCACAAAAAAA+AGG | + | chr7.1:38545823-38545842 | None:intergenic | 45.0% | |
| CGTCACTCTTGCAATCAATC+AGG | - | chr7.1:38546814-38546833 | MS.gene91571:intron | 45.0% | |
| CGTGGTGCAATTTATAGGGT+TGG | + | chr7.1:38547518-38547537 | None:intergenic | 45.0% | |
| CTTCCTTCCACACAAAAAGG+TGG | - | chr7.1:38547658-38547677 | MS.gene91571:intron | 45.0% | |
| GAAGCCCCGATACTTCAAAA+TGG | + | chr7.1:38544809-38544828 | None:intergenic | 45.0% | |
| GATAAAATCCCCCATGGACA+CGG | - | chr7.1:38545563-38545582 | MS.gene91571:intron | 45.0% | |
| GCAAAAAAAAATCGCACCCG+TGG | - | chr7.1:38545531-38545550 | MS.gene91571:intron | 45.0% | |
| GGTGACGAACATATAAGAGG+TGG | - | chr7.1:38545308-38545327 | MS.gene91571:CDS | 45.0% | |
| GTAGTGAGTCCTACACTTAG+TGG | - | chr7.1:38544965-38544984 | MS.gene91571:intron | 45.0% | |
| GTCAGGTGTTCATCTTGGTT+AGG | + | chr7.1:38547578-38547597 | None:intergenic | 45.0% | |
| GTGGCAGTAATTAACTGGAG+AGG | + | chr7.1:38543953-38543972 | None:intergenic | 45.0% | |
| GTGTTTACTTCGTCCATTGC+TGG | - | chr7.1:38543743-38543762 | MS.gene91571:intron | 45.0% | |
| GTTCATGGTAAGAGTAGGGA+TGG | - | chr7.1:38545509-38545528 | MS.gene91571:intron | 45.0% | |
| TATGTATGTCAGCACAGTGG+CGG | + | chr7.1:38548421-38548440 | None:intergenic | 45.0% | |
| TCCGTATCGTATCTCGTATC+CGG | + | chr7.1:38544155-38544174 | None:intergenic | 45.0% | |
| TCCGTTTATGGAGCCACAAA+AGG | - | chr7.1:38543788-38543807 | MS.gene91571:intron | 45.0% | |
| TCCTTCCACACAAAAAGGTG+GGG | - | chr7.1:38547660-38547679 | MS.gene91571:intron | 45.0% | |
| TCTTGTGAGCTTAGCTCAGT+TGG | + | chr7.1:38545886-38545905 | None:intergenic | 45.0% | |
| TGAAGAGAATCTGTGAAGCC+CGG | - | chr7.1:38544133-38544152 | MS.gene91571:intron | 45.0% | |
| TGCAGCTGGAAGACAAAGAA+AGG | + | chr7.1:38549326-38549345 | None:intergenic | 45.0% | |
| TGGTATGACTGCGTTAGTGA+CGG | - | chr7.1:38542751-38542770 | MS.gene91571:CDS | 45.0% | |
| TTGTTTGTGTGGTGTGGTGT+GGG | - | chr7.1:38544518-38544537 | MS.gene91571:intron | 45.0% | |
| ! | AACCACACCTTTTTGTCACG+TGG | + | chr7.1:38547536-38547555 | None:intergenic | 45.0% |
| ! | ACTATGGACTGTGTGTTTGG+AGG | - | chr7.1:38549088-38549107 | MS.gene91571:intron | 45.0% |
| ! | CAAGAGAGTGCAGTGAATGT+TGG | - | chr7.1:38544041-38544060 | MS.gene91571:intron | 45.0% |
| ! | GGATACGTATCGGGAAGTAT+CGG | - | chr7.1:38544741-38544760 | MS.gene91571:intron | 45.0% |
| ! | GGTGTGCAAGTTGACACAAA+TGG | + | chr7.1:38543691-38543710 | None:intergenic | 45.0% |
| ! | TCCATGGGGGATTTTATCCA+CGG | + | chr7.1:38545561-38545580 | None:intergenic | 45.0% |
| ! | TCTTTGGAAAGGGAGAGTTG+TGG | - | chr7.1:38548017-38548036 | MS.gene91571:intron | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+CGG | + | chr7.1:38545881-38545900 | None:intergenic | 45.0% |
| ! | TTTTTGTGGTGGTCGAGGTT+TGG | - | chr7.1:38545825-38545844 | MS.gene91571:intron | 45.0% |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr7.1:38544742-38544761 | MS.gene91571:intron | 45.0% |
| !!! | CCTTTTTTTTGTGGTGGTCG+AGG | - | chr7.1:38545820-38545839 | MS.gene91571:intron | 45.0% |
| !! | AAATTTAATTACTTAAAAAT+TGG | - | chr7.1:38543925-38543944 | MS.gene91571:intron | 5.0% |
| !! | AATAATGTTAAATATTTATT+TGG | - | chr7.1:38545478-38545497 | MS.gene91571:intron | 5.0% |
| !! | TAGAAAAATAAAAAATAATA+AGG | + | chr7.1:38543277-38543296 | None:intergenic | 5.0% |
| !!! | ATTTTTAAGTAATTAAATTT+TGG | + | chr7.1:38543925-38543944 | None:intergenic | 5.0% |
| AAAATAGAGCCTCCCGCAAG+TGG | + | chr7.1:38548515-38548534 | None:intergenic | 50.0% | |
| AGGTATCTGATCCGTGTCCA+TGG | + | chr7.1:38545577-38545596 | None:intergenic | 50.0% | |
| CACCACGTGACAAAAAGGTG+TGG | - | chr7.1:38547531-38547550 | MS.gene91571:intron | 50.0% | |
| CACCGTCGAAGTCTTGGTAT+CGG | + | chr7.1:38544427-38544446 | None:intergenic | 50.0% | |
| CAGCGTGGATATCCGTTTAG+CGG | + | chr7.1:38546239-38546258 | None:intergenic | 50.0% | |
| CCAGCTGCATCATACATCAC+TGG | - | chr7.1:38549337-38549356 | MS.gene91571:CDS | 50.0% | |
| CCAGTGATGTATGATGCAGC+TGG | + | chr7.1:38549340-38549359 | None:intergenic | 50.0% | |
| CCCGGATACGAGATACGATA+CGG | - | chr7.1:38544151-38544170 | MS.gene91571:intron | 50.0% | |
| CCGTATCGTATCTCGTATCC+GGG | + | chr7.1:38544154-38544173 | None:intergenic | 50.0% | |
| GAAGGGGTTGAAGCTGTAGA+TGG | - | chr7.1:38549238-38549257 | MS.gene91571:intron | 50.0% | |
| GGTATCTGATCCGTGTCCAT+GGG | + | chr7.1:38545576-38545595 | None:intergenic | 50.0% | |
| GGTATGACTGCGTTAGTGAC+GGG | - | chr7.1:38542752-38542771 | MS.gene91571:CDS | 50.0% | |
| GTATCTGATCCGTGTCCATG+GGG | + | chr7.1:38545575-38545594 | None:intergenic | 50.0% | |
| GTCCGATACCAAGACTTCGA+CGG | - | chr7.1:38544422-38544441 | MS.gene91571:intron | 50.0% | |
| TATCTGATCCGTGTCCATGG+GGG | + | chr7.1:38545574-38545593 | None:intergenic | 50.0% | |
| TCCGTGGATAAAATCCCCCA+TGG | - | chr7.1:38545557-38545576 | MS.gene91571:intron | 50.0% | |
| TGCAAGAGTGACGTCTTGAC+AGG | + | chr7.1:38546807-38546826 | None:intergenic | 50.0% | |
| ! | ACCCCACCTTTTTGTGTGGA+AGG | + | chr7.1:38547664-38547683 | None:intergenic | 50.0% |
| ! | CGGGACGTATCGGAAAGTAT+CGG | - | chr7.1:38544672-38544691 | MS.gene91571:intron | 50.0% |
| ! | GTCTTGGTATCGGACGACTT+TGG | + | chr7.1:38544417-38544436 | None:intergenic | 50.0% |
| !! | GGGAAGTATCGGGAAGGTAT+CGG | - | chr7.1:38544752-38544771 | MS.gene91571:intron | 50.0% |
| AAAGTGGACGGCGACCACTT+TGG | - | chr7.1:38544450-38544469 | MS.gene91571:intron | 55.0% | |
| AAAGTGGTCGCCGTCCACTT+TGG | + | chr7.1:38544451-38544470 | None:intergenic | 55.0% | |
| AGTGACGTCTTGACAGGTCC+AGG | + | chr7.1:38546801-38546820 | None:intergenic | 55.0% | |
| CCGATACGTCCCGATACACA+CGG | + | chr7.1:38544665-38544684 | None:intergenic | 55.0% | |
| CCGATTACACCGTCCACTTG+CGG | - | chr7.1:38548499-38548518 | MS.gene91571:intron | 55.0% | |
| CCGCAAGTGGACGGTGTAAT+CGG | + | chr7.1:38548502-38548521 | None:intergenic | 55.0% | |
| CCGTGTGTATCGGGACGTAT+CGG | - | chr7.1:38544662-38544681 | MS.gene91571:intron | 55.0% | |
| CGATACCAAGACTTCGACGG+TGG | - | chr7.1:38544425-38544444 | MS.gene91571:intron | 55.0% | |
| CGATTACACCGTCCACTTGC+GGG | - | chr7.1:38548500-38548519 | MS.gene91571:intron | 55.0% | |
| CGCAAGTGGACGGTGTAATC+GGG | + | chr7.1:38548501-38548520 | None:intergenic | 55.0% | |
| TATCGGTGCAGGATACGCAG+GGG | - | chr7.1:38544769-38544788 | MS.gene91571:intron | 55.0% | |
| TGCAGGATACGCAGGGGATA+CGG | - | chr7.1:38544775-38544794 | MS.gene91571:intron | 55.0% | |
| TTTGGCCACCGTCGAAGTCT+TGG | + | chr7.1:38544433-38544452 | None:intergenic | 55.0% | |
| ! | ACTGCACCGATACGCCGATA+CGG | - | chr7.1:38544181-38544200 | MS.gene91571:intron | 55.0% |
| ! | ATGACTGCGTTAGTGACGGG+AGG | - | chr7.1:38542755-38542774 | MS.gene91571:CDS | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr7.1:38544768-38544787 | MS.gene91571:intron | 55.0% |
| !! | CGTATCGGGAAGTATCGGGA+AGG | - | chr7.1:38544746-38544765 | MS.gene91571:intron | 55.0% |
| !! | TATCGGGAAGGTATCGGTGC+AGG | - | chr7.1:38544758-38544777 | MS.gene91571:intron | 55.0% |
| ATCGCACCCGTGGATATCCG+TGG | - | chr7.1:38545541-38545560 | MS.gene91571:intron | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | - | chr7.1:38546780-38546799 | MS.gene91571:intron | 60.0% | |
| GACGGTGTAATCGGGCACCT+TGG | + | chr7.1:38548493-38548512 | None:intergenic | 60.0% | |
| GACTTCGACGGTGGCCAAAG+TGG | - | chr7.1:38544434-38544453 | MS.gene91571:intron | 60.0% | |
| GGCTCTCCCATACGACCCAT+AGG | + | chr7.1:38549280-38549299 | None:intergenic | 60.0% | |
| TAGAGCCTCCCGCAAGTGGA+CGG | + | chr7.1:38548511-38548530 | None:intergenic | 60.0% | |
| TCGACGGTGGCCAAAGTGGA+CGG | - | chr7.1:38544438-38544457 | MS.gene91571:intron | 60.0% | |
| TGGTGTGGTGTGGGTCGTAC+TGG | - | chr7.1:38544527-38544546 | MS.gene91571:intron | 60.0% | |
| TTACACCGTCCACTTGCGGG+AGG | - | chr7.1:38548503-38548522 | MS.gene91571:intron | 60.0% | |
| ! | TTAGTGACGGGAGGAACCCG+AGG | - | chr7.1:38542764-38542783 | MS.gene91571:CDS | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr7.1:38544767-38544786 | MS.gene91571:intron | 60.0% |
| ACGGGAGGAACCCGAGGCAT+TGG | - | chr7.1:38542770-38542789 | MS.gene91571:CDS | 65.0% | |
| ! | CGGGAGGAACCCGAGGCATT+GGG | - | chr7.1:38542771-38542790 | MS.gene91571:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 38542701 | 38549396 | 38542701 | ID=MS.gene91571 |
| chr7.1 | mRNA | 38542701 | 38549396 | 38542701 | ID=MS.gene91571.t1;Parent=MS.gene91571 |
| chr7.1 | exon | 38549305 | 38549396 | 38549305 | ID=MS.gene91571.t1.exon1;Parent=MS.gene91571.t1 |
| chr7.1 | CDS | 38549305 | 38549396 | 38549305 | ID=cds.MS.gene91571.t1;Parent=MS.gene91571.t1 |
| chr7.1 | exon | 38548582 | 38548789 | 38548582 | ID=MS.gene91571.t1.exon2;Parent=MS.gene91571.t1 |
| chr7.1 | CDS | 38548582 | 38548789 | 38548582 | ID=cds.MS.gene91571.t1;Parent=MS.gene91571.t1 |
| chr7.1 | exon | 38548288 | 38548504 | 38548288 | ID=MS.gene91571.t1.exon3;Parent=MS.gene91571.t1 |
| chr7.1 | CDS | 38548288 | 38548504 | 38548288 | ID=cds.MS.gene91571.t1;Parent=MS.gene91571.t1 |
| chr7.1 | exon | 38545261 | 38545373 | 38545261 | ID=MS.gene91571.t1.exon4;Parent=MS.gene91571.t1 |
| chr7.1 | CDS | 38545261 | 38545373 | 38545261 | ID=cds.MS.gene91571.t1;Parent=MS.gene91571.t1 |
| chr7.1 | exon | 38542701 | 38542868 | 38542701 | ID=MS.gene91571.t1.exon5;Parent=MS.gene91571.t1 |
| chr7.1 | CDS | 38542701 | 38542868 | 38542701 | ID=cds.MS.gene91571.t1;Parent=MS.gene91571.t1 |
| Gene Sequence |
| Protein sequence |
