Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92019.t1 | XP_013447731.1 | 92.3 | 375 | 26 | 3 | 1 | 373 | 1 | 374 | 1.00E-123 | 453.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92019.t1 | Q9FYG7 | 48.6 | 111 | 50 | 2 | 73 | 183 | 47 | 150 | 4.1e-20 | 100.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92019.t1 | A0A072TXB5 | 92.3 | 375 | 26 | 3 | 1 | 373 | 1 | 374 | 7.5e-124 | 453.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92019.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058168 | MS.gene92019 | 0.816555 | 5.21E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92019.t1 | MTR_7g018500 | 95.467 | 375 | 14 | 3 | 1 | 373 | 1 | 374 | 0.0 | 552 |
| MS.gene92019.t1 | MTR_6g017055 | 48.596 | 356 | 102 | 16 | 73 | 366 | 67 | 403 | 2.15e-75 | 239 |
| MS.gene92019.t1 | MTR_1g103380 | 35.417 | 384 | 163 | 15 | 41 | 356 | 119 | 485 | 4.22e-43 | 156 |
| MS.gene92019.t1 | MTR_4g111935 | 33.459 | 266 | 141 | 11 | 5 | 245 | 14 | 268 | 2.49e-26 | 108 |
| MS.gene92019.t1 | MTR_2g078200 | 58.333 | 60 | 25 | 0 | 120 | 179 | 20 | 79 | 1.62e-16 | 79.7 |
| MS.gene92019.t1 | MTR_2g090960 | 51.562 | 64 | 31 | 0 | 115 | 178 | 19 | 82 | 4.47e-16 | 79.0 |
| MS.gene92019.t1 | MTR_6g015350 | 48.750 | 80 | 39 | 1 | 121 | 200 | 50 | 127 | 4.55e-16 | 79.0 |
| MS.gene92019.t1 | MTR_8g463380 | 52.308 | 65 | 31 | 0 | 115 | 179 | 49 | 113 | 5.04e-16 | 79.3 |
| MS.gene92019.t1 | MTR_4g079580 | 52.308 | 65 | 31 | 0 | 115 | 179 | 17 | 81 | 6.14e-16 | 78.6 |
| MS.gene92019.t1 | MTR_7g015010 | 53.448 | 58 | 27 | 0 | 121 | 178 | 58 | 115 | 2.31e-14 | 73.9 |
| MS.gene92019.t1 | MTR_4g109660 | 50.000 | 58 | 29 | 0 | 121 | 178 | 57 | 114 | 6.82e-13 | 68.9 |
| MS.gene92019.t1 | MTR_3g026050 | 50.000 | 58 | 29 | 0 | 121 | 178 | 58 | 115 | 3.04e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92019.t1 | AT1G67260 | 37.687 | 268 | 130 | 11 | 73 | 312 | 47 | 305 | 6.57e-35 | 131 |
| MS.gene92019.t1 | AT1G67260 | 37.687 | 268 | 130 | 11 | 73 | 312 | 47 | 305 | 6.57e-35 | 131 |
| MS.gene92019.t1 | AT1G67260 | 37.687 | 268 | 130 | 11 | 73 | 312 | 47 | 305 | 6.71e-35 | 132 |
| MS.gene92019.t1 | AT1G68800 | 54.867 | 113 | 42 | 4 | 120 | 229 | 112 | 218 | 1.66e-25 | 106 |
| MS.gene92019.t1 | AT1G68800 | 54.867 | 113 | 42 | 4 | 120 | 229 | 112 | 218 | 1.98e-25 | 105 |
| MS.gene92019.t1 | AT3G18550 | 38.562 | 153 | 70 | 3 | 113 | 241 | 141 | 293 | 5.76e-21 | 94.0 |
| MS.gene92019.t1 | AT3G18550 | 36.306 | 157 | 72 | 3 | 113 | 241 | 141 | 297 | 9.12e-20 | 90.5 |
| MS.gene92019.t1 | AT3G18550 | 36.306 | 157 | 72 | 3 | 113 | 241 | 141 | 297 | 1.02e-19 | 90.5 |
| MS.gene92019.t1 | AT3G18550 | 36.306 | 157 | 72 | 3 | 113 | 241 | 141 | 297 | 1.02e-19 | 90.5 |
| MS.gene92019.t1 | AT4G18390 | 36.986 | 146 | 88 | 3 | 103 | 248 | 27 | 168 | 2.73e-17 | 82.8 |
| MS.gene92019.t1 | AT4G18390 | 36.986 | 146 | 88 | 3 | 103 | 248 | 27 | 168 | 2.73e-17 | 82.8 |
| MS.gene92019.t1 | AT1G30210 | 58.621 | 58 | 24 | 0 | 121 | 178 | 51 | 108 | 1.81e-16 | 79.7 |
| MS.gene92019.t1 | AT1G30210 | 58.621 | 58 | 24 | 0 | 121 | 178 | 51 | 108 | 1.81e-16 | 79.7 |
| MS.gene92019.t1 | AT1G53230 | 51.515 | 66 | 32 | 0 | 115 | 180 | 44 | 109 | 5.29e-16 | 79.3 |
| MS.gene92019.t1 | AT1G53230 | 51.515 | 66 | 32 | 0 | 115 | 180 | 44 | 109 | 5.29e-16 | 79.3 |
| MS.gene92019.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 115 | 179 | 40 | 104 | 6.59e-16 | 79.0 |
| MS.gene92019.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 115 | 179 | 40 | 104 | 6.59e-16 | 79.0 |
| MS.gene92019.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 115 | 179 | 40 | 104 | 6.59e-16 | 79.0 |
| MS.gene92019.t1 | AT3G15030 | 52.308 | 65 | 31 | 0 | 115 | 179 | 40 | 104 | 6.59e-16 | 79.0 |
| MS.gene92019.t1 | AT2G31070 | 51.562 | 64 | 31 | 0 | 115 | 178 | 24 | 87 | 1.66e-15 | 77.4 |
| MS.gene92019.t1 | AT3G02150 | 55.172 | 58 | 26 | 0 | 121 | 178 | 75 | 132 | 1.08e-14 | 73.9 |
| MS.gene92019.t1 | AT3G02150 | 55.172 | 58 | 26 | 0 | 121 | 178 | 75 | 132 | 1.85e-14 | 74.3 |
| MS.gene92019.t1 | AT5G60970 | 48.276 | 58 | 30 | 0 | 121 | 178 | 64 | 121 | 1.19e-12 | 68.9 |
| MS.gene92019.t1 | AT5G08070 | 46.552 | 58 | 31 | 0 | 121 | 178 | 34 | 91 | 2.82e-11 | 63.5 |
| MS.gene92019.t1 | AT5G08070 | 46.552 | 58 | 31 | 0 | 121 | 178 | 34 | 91 | 2.82e-11 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCAACTTATTGCTCTTT+AGG | 0.129653 | 7.3:-79736493 | MS.gene92019:CDS |
| ATCCTGATACACTAACAAAT+TGG | 0.193845 | 7.3:-79736267 | MS.gene92019:CDS |
| GCCCAATTTGTTAGTGTATC+AGG | 0.208804 | 7.3:+79736265 | None:intergenic |
| CTCCAATGTTATCACCAAAT+TGG | 0.217754 | 7.3:-79735538 | MS.gene92019:CDS |
| GTTAGTGTATCAGGATTAAT+TGG | 0.223236 | 7.3:+79736274 | None:intergenic |
| CTTCGAAGACGAAGGATTCT+AGG | 0.286350 | 7.3:-79735832 | MS.gene92019:CDS |
| CTATGCCTGTCTTTCTTAAC+CGG | 0.314288 | 7.3:+79736148 | None:intergenic |
| TTCGATCTTCAAGACATGTT+AGG | 0.334610 | 7.3:-79736055 | MS.gene92019:CDS |
| TTTGAAGTTTCATCCTCATT+AGG | 0.336904 | 7.3:+79735695 | None:intergenic |
| TTATTATTAGCATCCCAATT+TGG | 0.341400 | 7.3:+79735524 | None:intergenic |
| TCATGAGAATCACTATTATT+AGG | 0.353829 | 7.3:+79735563 | None:intergenic |
| TCAGGGGTAAGGAAAGTAAA+AGG | 0.368203 | 7.3:+79736418 | None:intergenic |
| AATATCAGCTAATATCGATT+TGG | 0.375751 | 7.3:+79735255 | None:intergenic |
| TTCTTAACCGGTTTCTTGAC+CGG | 0.388342 | 7.3:+79736160 | None:intergenic |
| GAGCCATTCAAGTGTGTTGC+TGG | 0.409129 | 7.3:+79736021 | None:intergenic |
| TTCAAATCTTTGGAAAATCA+TGG | 0.409744 | 7.3:-79735296 | MS.gene92019:CDS |
| TCCAATGTTATCACCAAATT+GGG | 0.411724 | 7.3:-79735537 | MS.gene92019:CDS |
| CTAAAGATAGAAAGATGAAA+AGG | 0.414926 | 7.3:-79735868 | MS.gene92019:CDS |
| TCTTGATATTGCAGAAAAGT+TGG | 0.424180 | 7.3:+79735475 | None:intergenic |
| TCCTGATACACTAACAAATT+GGG | 0.434497 | 7.3:-79736266 | MS.gene92019:CDS |
| TCGATCTTCAAGACATGTTA+GGG | 0.442491 | 7.3:-79736054 | MS.gene92019:CDS |
| AGCAAGAACAACATAGCTTC+TGG | 0.450038 | 7.3:-79735959 | MS.gene92019:CDS |
| TTCATCTCCTTCATCGGACG+AGG | 0.483567 | 7.3:+79735901 | None:intergenic |
| TCTTCTTCCTCGTCCGATGA+AGG | 0.488840 | 7.3:-79735908 | MS.gene92019:CDS |
| TGATGAGTTGTTTGTGTGTA+GGG | 0.490224 | 7.3:+79736304 | None:intergenic |
| AATAACAATGATGCTGTCAC+TGG | 0.496363 | 7.3:-79735503 | MS.gene92019:CDS |
| AAAGAAACCGGTCAAGAAAC+CGG | 0.496709 | 7.3:-79736167 | MS.gene92019:CDS |
| AAATTTGCTCACAAAGAAAC+CGG | 0.498565 | 7.3:-79736179 | MS.gene92019:CDS |
| CATTAGGCATCAATTGATGA+AGG | 0.499616 | 7.3:+79735711 | None:intergenic |
| ATCTTCTTCATCTCCTTCAT+CGG | 0.500031 | 7.3:+79735895 | None:intergenic |
| CCTAAAGAGCAATAAGTTGA+AGG | 0.500471 | 7.3:+79736493 | None:intergenic |
| AGCAAGATTCACACATCTCA+AGG | 0.503482 | 7.3:-79736127 | MS.gene92019:CDS |
| TCAAGAACGAATCTATCATC+AGG | 0.510472 | 7.3:-79735458 | MS.gene92019:intron |
| TGTGATGAAGAAGATGAGTT+AGG | 0.521777 | 7.3:+79736451 | None:intergenic |
| TAAAGATAGAAAGATGAAAA+GGG | 0.526209 | 7.3:-79735867 | MS.gene92019:CDS |
| TCAAATCTTTGGAAAATCAT+GGG | 0.526493 | 7.3:-79735295 | MS.gene92019:CDS |
| GAACTTCCTCGCGATCTCGA+TGG | 0.528472 | 7.3:+79736078 | None:intergenic |
| AAGCCAGCAACACACTTGAA+TGG | 0.532128 | 7.3:-79736024 | MS.gene92019:CDS |
| TCATCAATTGATGCCTAATG+AGG | 0.536962 | 7.3:-79735708 | MS.gene92019:CDS |
| TTCGAAGACGAAGGATTCTA+GGG | 0.537014 | 7.3:-79735831 | MS.gene92019:CDS |
| AGAAAGCAAGAGCAAGAACA+AGG | 0.538860 | 7.3:-79735808 | MS.gene92019:CDS |
| TGATATCTTTAACTTCATTG+AGG | 0.548363 | 7.3:-79735657 | MS.gene92019:CDS |
| AGAAACCGGTTAAGAAAGAC+AGG | 0.551030 | 7.3:-79736153 | MS.gene92019:CDS |
| TAGGGAACAGAAATTGCTGC+TGG | 0.557496 | 7.3:+79736322 | None:intergenic |
| TCCCAATTTGGTGATAACAT+TGG | 0.563066 | 7.3:+79735536 | None:intergenic |
| TTAGGATTATAACAAGGGTA+AGG | 0.565101 | 7.3:+79736469 | None:intergenic |
| GATGAGTTAGGATTATAACA+AGG | 0.570713 | 7.3:+79736463 | None:intergenic |
| ATGATGAGTTGTTTGTGTGT+AGG | 0.581066 | 7.3:+79736303 | None:intergenic |
| GGGTAAGGAAAGTAAAAGGA+GGG | 0.582814 | 7.3:+79736422 | None:intergenic |
| CAGCTAATATCGATTTGGAC+TGG | 0.588709 | 7.3:+79735260 | None:intergenic |
| GGGGTAAGGAAAGTAAAAGG+AGG | 0.592199 | 7.3:+79736421 | None:intergenic |
| ATGAGTTAGGATTATAACAA+GGG | 0.601724 | 7.3:+79736464 | None:intergenic |
| GACTTTCCATCGAGATCGCG+AGG | 0.608900 | 7.3:-79736084 | MS.gene92019:CDS |
| CTCAAGGGTTGAGAGACAGA+AGG | 0.613193 | 7.3:-79736111 | MS.gene92019:CDS |
| GAAAGCAAGAGCAAGAACAA+GGG | 0.614345 | 7.3:-79735807 | MS.gene92019:CDS |
| GCTTCTGGCGATGACGATGA+TGG | 0.616062 | 7.3:-79735944 | MS.gene92019:CDS |
| GAAAGAATCTTCGAAGACGA+AGG | 0.618129 | 7.3:-79735840 | MS.gene92019:CDS |
| TCAAGGGTTGAGAGACAGAA+GGG | 0.623957 | 7.3:-79736110 | MS.gene92019:CDS |
| AATCTTTGGAAAATCATGGG+AGG | 0.624471 | 7.3:-79735292 | MS.gene92019:CDS |
| GCAAGATTCACACATCTCAA+GGG | 0.635283 | 7.3:-79736126 | MS.gene92019:CDS |
| ATGTTGAAACAAGATCTAAG+TGG | 0.698091 | 7.3:-79736223 | MS.gene92019:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAATTAATTAACAAAA+AGG | - | chr7.3:79736369-79736388 | MS.gene92019:CDS | 10.0% |
| !!! | TTTTAGGTTTAAACTTTTTA+GGG | - | chr7.3:79736442-79736461 | MS.gene92019:CDS | 15.0% |
| !!! | TTTTTAGGTTTAAACTTTTT+AGG | - | chr7.3:79736441-79736460 | MS.gene92019:CDS | 15.0% |
| !! | TAAAGATAGAAAGATGAAAA+GGG | - | chr7.3:79735895-79735914 | MS.gene92019:CDS | 20.0% |
| !!! | TTGTGATACTTACAATTTTT+AGG | - | chr7.3:79736426-79736445 | MS.gene92019:CDS | 20.0% |
| ! | ATGAGTTAGGATTATAACAA+GGG | + | chr7.3:79735301-79735320 | None:intergenic | 25.0% |
| ! | CTAAAGATAGAAAGATGAAA+AGG | - | chr7.3:79735894-79735913 | MS.gene92019:CDS | 25.0% |
| ! | TCATGAGAATCACTATTATT+AGG | + | chr7.3:79736202-79736221 | None:intergenic | 25.0% |
| ! | TTATTATTAGCATCCCAATT+TGG | + | chr7.3:79736241-79736260 | None:intergenic | 25.0% |
| !! | TCAAATCTTTGGAAAATCAT+GGG | - | chr7.3:79736467-79736486 | MS.gene92019:CDS | 25.0% |
| !! | TGATATCTTTAACTTCATTG+AGG | - | chr7.3:79736105-79736124 | MS.gene92019:CDS | 25.0% |
| !! | TTCAAATCTTTGGAAAATCA+TGG | - | chr7.3:79736466-79736485 | MS.gene92019:CDS | 25.0% |
| !!! | TGTTGATTTTGATCAATTTC+AGG | + | chr7.3:79736028-79736047 | None:intergenic | 25.0% |
| ATCCTGATACACTAACAAAT+TGG | - | chr7.3:79735495-79735514 | MS.gene92019:CDS | 30.0% | |
| ATGTTGAAACAAGATCTAAG+TGG | - | chr7.3:79735539-79735558 | MS.gene92019:CDS | 30.0% | |
| GATGAGTTAGGATTATAACA+AGG | + | chr7.3:79735302-79735321 | None:intergenic | 30.0% | |
| GTTAGTGTATCAGGATTAAT+TGG | + | chr7.3:79735491-79735510 | None:intergenic | 30.0% | |
| TCCAATGTTATCACCAAATT+GGG | - | chr7.3:79736225-79736244 | MS.gene92019:CDS | 30.0% | |
| TCCTGATACACTAACAAATT+GGG | - | chr7.3:79735496-79735515 | MS.gene92019:CDS | 30.0% | |
| TCTTGATATTGCAGAAAAGT+TGG | + | chr7.3:79736290-79736309 | None:intergenic | 30.0% | |
| TTAGGATTATAACAAGGGTA+AGG | + | chr7.3:79735296-79735315 | None:intergenic | 30.0% | |
| ! | AAATTTGCTCACAAAGAAAC+CGG | - | chr7.3:79735583-79735602 | MS.gene92019:CDS | 30.0% |
| ! | TTTGAAGTTTCATCCTCATT+AGG | + | chr7.3:79736070-79736089 | None:intergenic | 30.0% |
| !!! | TAGAAGAAGCATTTTGATCA+GGG | + | chr7.3:79735364-79735383 | None:intergenic | 30.0% |
| !!! | TTAGAAGAAGCATTTTGATC+AGG | + | chr7.3:79735365-79735384 | None:intergenic | 30.0% |
| !!! | TTTTTAGGGCTTCAAATCTT+TGG | - | chr7.3:79736456-79736475 | MS.gene92019:CDS | 30.0% |
| AATAACAATGATGCTGTCAC+TGG | - | chr7.3:79736259-79736278 | MS.gene92019:CDS | 35.0% | |
| ATCTTCTTCATCTCCTTCAT+CGG | + | chr7.3:79735870-79735889 | None:intergenic | 35.0% | |
| ATGATGAGTTGTTTGTGTGT+AGG | + | chr7.3:79735462-79735481 | None:intergenic | 35.0% | |
| CATTAGGCATCAATTGATGA+AGG | + | chr7.3:79736054-79736073 | None:intergenic | 35.0% | |
| CCTTCAACTTATTGCTCTTT+AGG | - | chr7.3:79735269-79735288 | MS.gene92019:CDS | 35.0% | |
| CTCCAATGTTATCACCAAAT+TGG | - | chr7.3:79736224-79736243 | MS.gene92019:CDS | 35.0% | |
| TCAAGAACGAATCTATCATC+AGG | - | chr7.3:79736304-79736323 | MS.gene92019:CDS | 35.0% | |
| TCATCAATTGATGCCTAATG+AGG | - | chr7.3:79736054-79736073 | MS.gene92019:CDS | 35.0% | |
| TCGATCTTCAAGACATGTTA+GGG | - | chr7.3:79735708-79735727 | MS.gene92019:CDS | 35.0% | |
| TGATGAGTTGTTTGTGTGTA+GGG | + | chr7.3:79735461-79735480 | None:intergenic | 35.0% | |
| TGTGATGAAGAAGATGAGTT+AGG | + | chr7.3:79735314-79735333 | None:intergenic | 35.0% | |
| TTCGATCTTCAAGACATGTT+AGG | - | chr7.3:79735707-79735726 | MS.gene92019:CDS | 35.0% | |
| ! | AATCTTTGGAAAATCATGGG+AGG | - | chr7.3:79736470-79736489 | MS.gene92019:CDS | 35.0% |
| ! | CCTAAAGAGCAATAAGTTGA+AGG | + | chr7.3:79735272-79735291 | None:intergenic | 35.0% |
| ! | TCCCAATTTGGTGATAACAT+TGG | + | chr7.3:79736229-79736248 | None:intergenic | 35.0% |
| !!! | AGAAGAAGCATTTTGATCAG+GGG | + | chr7.3:79735363-79735382 | None:intergenic | 35.0% |
| AAAGAAACCGGTCAAGAAAC+CGG | - | chr7.3:79735595-79735614 | MS.gene92019:CDS | 40.0% | |
| AGAAACCGGTTAAGAAAGAC+AGG | - | chr7.3:79735609-79735628 | MS.gene92019:CDS | 40.0% | |
| AGAAAGCAAGAGCAAGAACA+AGG | - | chr7.3:79735954-79735973 | MS.gene92019:CDS | 40.0% | |
| AGCAAGAACAACATAGCTTC+TGG | - | chr7.3:79735803-79735822 | MS.gene92019:CDS | 40.0% | |
| AGCAAGATTCACACATCTCA+AGG | - | chr7.3:79735635-79735654 | MS.gene92019:CDS | 40.0% | |
| CTATGCCTGTCTTTCTTAAC+CGG | + | chr7.3:79735617-79735636 | None:intergenic | 40.0% | |
| GAAAGAATCTTCGAAGACGA+AGG | - | chr7.3:79735922-79735941 | MS.gene92019:CDS | 40.0% | |
| GAAAGCAAGAGCAAGAACAA+GGG | - | chr7.3:79735955-79735974 | MS.gene92019:CDS | 40.0% | |
| GCAAGATTCACACATCTCAA+GGG | - | chr7.3:79735636-79735655 | MS.gene92019:CDS | 40.0% | |
| GGGTAAGGAAAGTAAAAGGA+GGG | + | chr7.3:79735343-79735362 | None:intergenic | 40.0% | |
| TCAGGGGTAAGGAAAGTAAA+AGG | + | chr7.3:79735347-79735366 | None:intergenic | 40.0% | |
| TTCGAAGACGAAGGATTCTA+GGG | - | chr7.3:79735931-79735950 | MS.gene92019:CDS | 40.0% | |
| ! | TTCTTAACCGGTTTCTTGAC+CGG | + | chr7.3:79735605-79735624 | None:intergenic | 40.0% |
| !! | AAGCATTTTGATCAGGGGTA+AGG | + | chr7.3:79735358-79735377 | None:intergenic | 40.0% |
| !! | GCCCAATTTGTTAGTGTATC+AGG | + | chr7.3:79735500-79735519 | None:intergenic | 40.0% |
| AAGCCAGCAACACACTTGAA+TGG | - | chr7.3:79735738-79735757 | MS.gene92019:CDS | 45.0% | |
| CTTCGAAGACGAAGGATTCT+AGG | - | chr7.3:79735930-79735949 | MS.gene92019:CDS | 45.0% | |
| GGGGTAAGGAAAGTAAAAGG+AGG | + | chr7.3:79735344-79735363 | None:intergenic | 45.0% | |
| TAGGGAACAGAAATTGCTGC+TGG | + | chr7.3:79735443-79735462 | None:intergenic | 45.0% | |
| TCAAGGGTTGAGAGACAGAA+GGG | - | chr7.3:79735652-79735671 | MS.gene92019:CDS | 45.0% | |
| CTCAAGGGTTGAGAGACAGA+AGG | - | chr7.3:79735651-79735670 | MS.gene92019:CDS | 50.0% | |
| GAGCCATTCAAGTGTGTTGC+TGG | + | chr7.3:79735744-79735763 | None:intergenic | 50.0% | |
| TCTTCTTCCTCGTCCGATGA+AGG | - | chr7.3:79735854-79735873 | MS.gene92019:CDS | 50.0% | |
| TTCATCTCCTTCATCGGACG+AGG | + | chr7.3:79735864-79735883 | None:intergenic | 50.0% | |
| GAACTTCCTCGCGATCTCGA+TGG | + | chr7.3:79735687-79735706 | None:intergenic | 55.0% | |
| GACTTTCCATCGAGATCGCG+AGG | - | chr7.3:79735678-79735697 | MS.gene92019:CDS | 55.0% | |
| GCTTCTGGCGATGACGATGA+TGG | - | chr7.3:79735818-79735837 | MS.gene92019:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 79735263 | 79736521 | 79735263 | ID=MS.gene92019 |
| chr7.3 | mRNA | 79735263 | 79736521 | 79735263 | ID=MS.gene92019.t1;Parent=MS.gene92019 |
| chr7.3 | exon | 79735459 | 79736521 | 79735459 | ID=MS.gene92019.t1.exon1;Parent=MS.gene92019.t1 |
| chr7.3 | CDS | 79735459 | 79736521 | 79735459 | ID=cds.MS.gene92019.t1;Parent=MS.gene92019.t1 |
| chr7.3 | exon | 79735263 | 79735321 | 79735263 | ID=MS.gene92019.t1.exon2;Parent=MS.gene92019.t1 |
| chr7.3 | CDS | 79735263 | 79735321 | 79735263 | ID=cds.MS.gene92019.t1;Parent=MS.gene92019.t1 |
| Gene Sequence |
| Protein sequence |
