Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92265.t1 | XP_003627434.1 | 98 | 769 | 15 | 0 | 1 | 769 | 1 | 769 | 0.00E+00 | 1507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92265.t1 | Q6NQ79 | 60.8 | 762 | 271 | 9 | 4 | 758 | 2 | 742 | 3.6e-268 | 925.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92265.t1 | G7L956 | 98.0 | 769 | 15 | 0 | 1 | 769 | 1 | 769 | 0.0e+00 | 1507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92265.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051033 | MS.gene92265 | 0.928918 | 1.46E-92 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92265.t1 | MTR_8g022980 | 98.049 | 769 | 15 | 0 | 1 | 769 | 1 | 769 | 0.0 | 1567 |
| MS.gene92265.t1 | MTR_8g022980 | 97.972 | 641 | 13 | 0 | 129 | 769 | 1 | 641 | 0.0 | 1311 |
| MS.gene92265.t1 | MTR_8g022980 | 98.427 | 572 | 9 | 0 | 198 | 769 | 1 | 572 | 0.0 | 1170 |
| MS.gene92265.t1 | MTR_2g044550 | 61.578 | 773 | 267 | 10 | 2 | 759 | 1 | 758 | 0.0 | 956 |
| MS.gene92265.t1 | MTR_8g038730 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 3.14e-126 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92265.t1 | AT3G43240 | 61.417 | 762 | 266 | 9 | 4 | 758 | 2 | 742 | 0.0 | 939 |
Find 191 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGAAAGTAAACAAAATT+TGG | 0.119113 | 8.2:+72762565 | None:intergenic |
| GCAGGGTCTTGGCGCATTTA+AGG | 0.202754 | 8.2:-72756165 | MS.gene92265:intron |
| TTCCCTGAGTTGGTTTCTTC+GGG | 0.216916 | 8.2:-72763752 | MS.gene92265:CDS |
| GCTTCCTCAATGGGCTTTGC+AGG | 0.239030 | 8.2:-72759460 | MS.gene92265:intron |
| CTCTGCCTAGCTGGAGTTAA+TGG | 0.257092 | 8.2:+72758326 | None:intergenic |
| CTTTCAAGGGGAGCAGTTAC+TGG | 0.263650 | 8.2:-72762551 | MS.gene92265:CDS |
| AGTGGACCTTCTGGTGTAAA+TGG | 0.273095 | 8.2:-72758242 | MS.gene92265:CDS |
| CTGCAAAACTTTCTCCATTT+GGG | 0.274228 | 8.2:+72761950 | None:intergenic |
| GAATCCCATATGTTGTGTTT+TGG | 0.280927 | 8.2:-72761752 | MS.gene92265:CDS |
| TGAGTCATTGCTGAGATCTT+TGG | 0.295961 | 8.2:-72760676 | MS.gene92265:CDS |
| TTTCCCTGAGTTGGTTTCTT+CGG | 0.299281 | 8.2:-72763753 | MS.gene92265:CDS |
| AAGAGCTCTGATATCTCTTC+AGG | 0.306181 | 8.2:+72762481 | None:intergenic |
| TGCAGAGGCCCTTCATCTTA+AGG | 0.306525 | 8.2:-72761932 | MS.gene92265:intron |
| GAGCTAATTCATATTCTAAA+AGG | 0.310868 | 8.2:+72756526 | None:intergenic |
| TCTGCAAAACTTTCTCCATT+TGG | 0.312545 | 8.2:+72761949 | None:intergenic |
| CAATGATGCTGATAGCGATA+TGG | 0.314916 | 8.2:-72761168 | MS.gene92265:CDS |
| TGCCCCTCCACCACCGCTTC+AGG | 0.318880 | 8.2:-72760155 | MS.gene92265:CDS |
| CACTAAAAGGTGTCATTCTA+TGG | 0.325620 | 8.2:+72758261 | None:intergenic |
| GATTCACACCTCTTTCTTGT+AGG | 0.334905 | 8.2:+72758425 | None:intergenic |
| ACACCAGAAGGTCCACTAAA+AGG | 0.337433 | 8.2:+72758248 | None:intergenic |
| CCATGTTTCTTCAACGGTAA+TGG | 0.343971 | 8.2:+72758086 | None:intergenic |
| TCTTCATCATTGTGGATGTC+AGG | 0.348427 | 8.2:+72758386 | None:intergenic |
| AGGAAGTTGGTTCACTGGTT+TGG | 0.360399 | 8.2:-72762525 | MS.gene92265:CDS |
| CATATCTCACTTCTAGTATC+TGG | 0.366260 | 8.2:-72760070 | MS.gene92265:CDS |
| CCTTCTGGTGTAAATGGCTT+TGG | 0.390245 | 8.2:-72758236 | MS.gene92265:CDS |
| CTTGGCATTGCTAGTATTCA+AGG | 0.391786 | 8.2:-72758581 | MS.gene92265:CDS |
| ACAGTAGTGCTGCTGGGGAT+TGG | 0.392031 | 8.2:-72756238 | MS.gene92265:intron |
| GATATGGGGCCACACCTTCT+TGG | 0.399730 | 8.2:-72761152 | MS.gene92265:CDS |
| GAACTCGGCAAGCCCACCTT+GGG | 0.404076 | 8.2:+72757063 | None:intergenic |
| TCATCATGTATCTGAATAGA+AGG | 0.407728 | 8.2:+72761050 | None:intergenic |
| CAGTAGTGCTGCTGGGGATT+GGG | 0.410452 | 8.2:-72756237 | MS.gene92265:CDS |
| TCATGGAGTTTCTGATTCTC+CGG | 0.410638 | 8.2:-72757105 | MS.gene92265:CDS |
| TGGCGTCGAACATGAGGAAT+TGG | 0.411641 | 8.2:+72758281 | None:intergenic |
| AAAATAATGCGTGACGGAAA+TGG | 0.412532 | 8.2:+72761700 | None:intergenic |
| CAAGTATCCTTTCCCTGAGT+TGG | 0.416051 | 8.2:-72763762 | MS.gene92265:CDS |
| TATCAAAGCTCTGATAAAGA+TGG | 0.426674 | 8.2:-72758506 | MS.gene92265:CDS |
| CACCTCTTTCTTGTAGGAGG+GGG | 0.429083 | 8.2:+72758431 | None:intergenic |
| ACGTTGGCAATGGCATCAAC+TGG | 0.431163 | 8.2:-72756879 | MS.gene92265:CDS |
| TAGCATGAAGCTTCCTCAAT+GGG | 0.431181 | 8.2:-72759469 | MS.gene92265:CDS |
| AACTCTTTGCAATCCGGAAA+AGG | 0.432695 | 8.2:-72762620 | MS.gene92265:CDS |
| CCAATACTACTACGCTTCAC+AGG | 0.433287 | 8.2:+72758179 | None:intergenic |
| TTTCCATTCAGAATGGCATC+AGG | 0.435615 | 8.2:+72757040 | None:intergenic |
| GCTGCCTGAAGCGGTGGTGG+AGG | 0.438692 | 8.2:+72760151 | None:intergenic |
| GGTTCAAACTCTTTGCAATC+CGG | 0.439687 | 8.2:-72762626 | MS.gene92265:CDS |
| AATGATGCTGATAGCGATAT+GGG | 0.440722 | 8.2:-72761167 | MS.gene92265:CDS |
| TATATAAGTTGTAGAGATCA+AGG | 0.442313 | 8.2:+72757014 | None:intergenic |
| TGTGACAGAAGGCAGGGTCT+TGG | 0.443860 | 8.2:-72756176 | MS.gene92265:CDS |
| CTGTTCAACAGTAGTGCTGC+TGG | 0.445981 | 8.2:-72756245 | MS.gene92265:intron |
| TCATCTTCTTCATCCATCTC+TGG | 0.448210 | 8.2:+72761101 | None:intergenic |
| GGATGTCAGGGCTAGCCCCT+TGG | 0.453940 | 8.2:+72758399 | None:intergenic |
| ACCTCAGAGCAAGTCTGTAC+CGG | 0.455288 | 8.2:+72758050 | None:intergenic |
| CCACAATGATGAAGAGGAAA+AGG | 0.457336 | 8.2:-72758378 | MS.gene92265:CDS |
| ACCAAAATACCTTAAGATGA+AGG | 0.457949 | 8.2:+72761923 | None:intergenic |
| CATGGAGTTTCTGATTCTCC+GGG | 0.458678 | 8.2:-72757104 | MS.gene92265:CDS |
| AATGCTGCTTGCTGTGTCAC+AGG | 0.459679 | 8.2:-72756485 | MS.gene92265:intron |
| GGGGAGGCTTCAACCAAATG+GGG | 0.466408 | 8.2:+72758450 | None:intergenic |
| AGGATAGGACAATGGTGAAT+GGG | 0.468465 | 8.2:-72758358 | MS.gene92265:CDS |
| TCACACCTCTTTCTTGTAGG+AGG | 0.470346 | 8.2:+72758428 | None:intergenic |
| CCTGTGAAGCGTAGTAGTAT+TGG | 0.471268 | 8.2:-72758179 | MS.gene92265:CDS |
| TTCCCTGATGCCATTCTGAA+TGG | 0.472931 | 8.2:-72757043 | MS.gene92265:CDS |
| TTCAATGAAATAACCTGCTT+AGG | 0.475210 | 8.2:+72758110 | None:intergenic |
| GGATGAGGAAGTTGGTTCAC+TGG | 0.477657 | 8.2:-72762530 | MS.gene92265:CDS |
| AGGTACCTGATCATTAAAAC+AGG | 0.479430 | 8.2:+72760036 | None:intergenic |
| CTTCGGCTGTGACAGAAGGC+AGG | 0.479531 | 8.2:-72756183 | MS.gene92265:CDS |
| CTCTGATATCTCTTCAGGGT+TGG | 0.486126 | 8.2:+72762486 | None:intergenic |
| AAGCTCATCTCAGCCTAAGC+AGG | 0.489092 | 8.2:-72758123 | MS.gene92265:CDS |
| GGGAGGCTTCAACCAAATGG+GGG | 0.489152 | 8.2:+72758451 | None:intergenic |
| ATGTTTCTTCTACAGGGAGT+TGG | 0.489899 | 8.2:-72756579 | MS.gene92265:intron |
| CTGCCTGAAGCGGTGGTGGA+GGG | 0.490738 | 8.2:+72760152 | None:intergenic |
| AAGGATAGGACAATGGTGAA+TGG | 0.491742 | 8.2:-72758359 | MS.gene92265:CDS |
| TCTGGTGTAAATGGCTTTGG+TGG | 0.494892 | 8.2:-72758233 | MS.gene92265:CDS |
| AACACAGTAAAGCTTGAAAG+AGG | 0.495127 | 8.2:+72761220 | None:intergenic |
| GGAACTCGGCAAGCCCACCT+TGG | 0.495235 | 8.2:+72757062 | None:intergenic |
| GCAAGCTCCATGGCAAGTAT+AGG | 0.496463 | 8.2:-72760319 | MS.gene92265:intron |
| CAGTTACTGGATGAGGAAGT+TGG | 0.497802 | 8.2:-72762538 | MS.gene92265:CDS |
| GATAAAGATGGATGTGATAA+CGG | 0.502582 | 8.2:-72758494 | MS.gene92265:CDS |
| GGAGGCTTCAACCAAATGGG+GGG | 0.505795 | 8.2:+72758452 | None:intergenic |
| GGAATTTATTAAAGATGTCA+TGG | 0.506761 | 8.2:-72757122 | MS.gene92265:CDS |
| GAAGCTGCCTGAAGCGGTGG+TGG | 0.510387 | 8.2:+72760148 | None:intergenic |
| CACACCTCTTTCTTGTAGGA+GGG | 0.510592 | 8.2:+72758429 | None:intergenic |
| TTAGCATGAAGCTTCCTCAA+TGG | 0.514746 | 8.2:-72759470 | MS.gene92265:CDS |
| CCTTCTGTCACAGCCGAAGT+GGG | 0.515520 | 8.2:+72756187 | None:intergenic |
| TTCACTGGTTTGGCAAGGTG+TGG | 0.516514 | 8.2:-72762515 | MS.gene92265:CDS |
| GCTGGGGATTGGGTGAATTG+TGG | 0.518001 | 8.2:-72756227 | MS.gene92265:CDS |
| TGTTCAACAGTAGTGCTGCT+GGG | 0.519023 | 8.2:-72756244 | MS.gene92265:intron |
| TTGCTGAGATCTTTGGAGGA+TGG | 0.521508 | 8.2:-72760669 | MS.gene92265:CDS |
| AGGGGAGCAGTTACTGGATG+AGG | 0.522856 | 8.2:-72762545 | MS.gene92265:CDS |
| GTTGGTTCACTGGTTTGGCA+AGG | 0.524333 | 8.2:-72762520 | MS.gene92265:CDS |
| CAGAATGGCATCAGGGAACT+CGG | 0.525188 | 8.2:+72757048 | None:intergenic |
| TGCCTGAAGCGGTGGTGGAG+GGG | 0.526869 | 8.2:+72760153 | None:intergenic |
| TGGGTGAATTGTGGCATATG+TGG | 0.528030 | 8.2:-72756218 | MS.gene92265:CDS |
| GAATCAGTCGGCTATGCCCC+CGG | 0.528908 | 8.2:+72757086 | None:intergenic |
| GATGATGAAGAAAGTTCCTC+AGG | 0.530128 | 8.2:-72761080 | MS.gene92265:CDS |
| CTTCATCATTGTGGATGTCA+GGG | 0.531068 | 8.2:+72758387 | None:intergenic |
| GCAGGCAGCATATTGAGAAA+AGG | 0.532018 | 8.2:+72761722 | None:intergenic |
| AGCTTTGATAAAAGAAAAGC+AGG | 0.532122 | 8.2:+72758519 | None:intergenic |
| GTTTACTTAGAAATCCCAAA+TGG | 0.532260 | 8.2:-72761964 | MS.gene92265:CDS |
| TCTTTCTCAAAAGAAGCTAC+AGG | 0.532796 | 8.2:+72758554 | None:intergenic |
| CAATGTTGACCCTCCAGAGA+TGG | 0.533538 | 8.2:-72761114 | MS.gene92265:CDS |
| CCAAAATACCTTAAGATGAA+GGG | 0.533560 | 8.2:+72761924 | None:intergenic |
| AAACTTCGATAAGAAACATC+AGG | 0.533627 | 8.2:+72758611 | None:intergenic |
| CTTTGGTGGTGCCCATGTTG+AGG | 0.535826 | 8.2:-72758219 | MS.gene92265:CDS |
| TCTCTACAACTTATATAAAG+AGG | 0.539055 | 8.2:-72757008 | MS.gene92265:intron |
| GGAGGATTTCACGTTGGCAA+TGG | 0.539913 | 8.2:-72756889 | MS.gene92265:CDS |
| CGCCCCGAAGAAACCAACTC+AGG | 0.541385 | 8.2:+72763749 | None:intergenic |
| TATCGAAGTTTAGTTGCACT+TGG | 0.543468 | 8.2:-72758599 | MS.gene92265:CDS |
| TCTTAGGTGGTTACAAGGGG+AGG | 0.545591 | 8.2:-72756907 | MS.gene92265:intron |
| CCCACTTCGGCTGTGACAGA+AGG | 0.550457 | 8.2:-72756187 | MS.gene92265:CDS |
| TCTTCTTCATCCATCTCTGG+AGG | 0.551868 | 8.2:+72761104 | None:intergenic |
| TGAGATATGTGCAGAACTGC+AGG | 0.552300 | 8.2:+72760084 | None:intergenic |
| GTTGCAAATGGGTATTCTCA+AGG | 0.557448 | 8.2:-72755956 | MS.gene92265:CDS |
| ACACCTCTTTCTTGTAGGAG+GGG | 0.558864 | 8.2:+72758430 | None:intergenic |
| CCATTACCGTTGAAGAAACA+TGG | 0.561425 | 8.2:-72758086 | MS.gene92265:CDS |
| GCCTTCTGTCACAGCCGAAG+TGG | 0.563244 | 8.2:+72756186 | None:intergenic |
| GTCATTGCTGAGATCTTTGG+AGG | 0.563395 | 8.2:-72760673 | MS.gene92265:CDS |
| CAACATACCTATACTTGCCA+TGG | 0.567611 | 8.2:+72760312 | None:intergenic |
| TGGCAATGGCATCAACTGGA+AGG | 0.569612 | 8.2:-72756875 | MS.gene92265:CDS |
| CTACAGCCATGTTTCTTCAA+CGG | 0.569703 | 8.2:+72758080 | None:intergenic |
| AACTTGAGATTTCTCATCTG+TGG | 0.569846 | 8.2:-72761020 | MS.gene92265:CDS |
| GGTTTCTTCGGGGCGTCTCG+AGG | 0.575757 | 8.2:-72763741 | MS.gene92265:intron |
| TAATGCGTGACGGAAATGGC+AGG | 0.576765 | 8.2:+72761704 | None:intergenic |
| ACATGGCTGTAGCAGAGGCC+CGG | 0.576956 | 8.2:-72758069 | MS.gene92265:CDS |
| TGACATCCACAATGATGAAG+AGG | 0.577598 | 8.2:-72758384 | MS.gene92265:CDS |
| TTGGCATTGCTAGTATTCAA+GGG | 0.579438 | 8.2:-72758580 | MS.gene92265:CDS |
| AGAGCTCTGATATCTCTTCA+GGG | 0.580730 | 8.2:+72762482 | None:intergenic |
| CCTCAGAGCAAGTCTGTACC+GGG | 0.582355 | 8.2:+72758051 | None:intergenic |
| AAGAAACATGGCTGTAGCAG+AGG | 0.582907 | 8.2:-72758074 | MS.gene92265:CDS |
| TTCAACAGAACGTGTTTCAG+AGG | 0.582910 | 8.2:+72763808 | None:intergenic |
| GAAGAAACCAACTCAGGGAA+AGG | 0.585243 | 8.2:+72763755 | None:intergenic |
| GCCGACTGATTCCCCAAGGT+GGG | 0.585564 | 8.2:-72757075 | MS.gene92265:CDS |
| TTGTGGCATATGTGGTGAGT+GGG | 0.586975 | 8.2:-72756210 | MS.gene92265:CDS |
| GTTCAACAGTAGTGCTGCTG+GGG | 0.589643 | 8.2:-72756243 | MS.gene92265:intron |
| CTTCTTCATCCATCTCTGGA+GGG | 0.590584 | 8.2:+72761105 | None:intergenic |
| ATTCTATGGCGTCGAACATG+AGG | 0.590589 | 8.2:+72758275 | None:intergenic |
| TTCGGCTGTGACAGAAGGCA+GGG | 0.591667 | 8.2:-72756182 | MS.gene92265:CDS |
| ATGATGAAGAGGAAAAGGAT+AGG | 0.591727 | 8.2:-72758373 | MS.gene92265:CDS |
| CCAAAGCCATTTACACCAGA+AGG | 0.591921 | 8.2:+72758236 | None:intergenic |
| GTGGCACATAAGCCTCAACA+TGG | 0.597135 | 8.2:+72758207 | None:intergenic |
| ACATACAGCCGTCGGTAATG+TGG | 0.597154 | 8.2:+72762453 | None:intergenic |
| CTACGCTTCACAGGGACAAG+TGG | 0.597593 | 8.2:+72758188 | None:intergenic |
| ATGCGTAGTTGCAAGCTCCA+TGG | 0.599062 | 8.2:-72760329 | MS.gene92265:CDS |
| AAAGAAGCTGCCTGAAGCGG+TGG | 0.599822 | 8.2:+72760145 | None:intergenic |
| ATGTTGCAGTTTCAGCCACA+AGG | 0.599844 | 8.2:-72763866 | MS.gene92265:CDS |
| TAATTCATATTCTAAAAGGT+AGG | 0.599846 | 8.2:+72756530 | None:intergenic |
| GGCAATGGCATCAACTGGAA+GGG | 0.600155 | 8.2:-72756874 | MS.gene92265:CDS |
| CAGAAGCTTACAACAGTGGA+AGG | 0.600470 | 8.2:+72760993 | None:intergenic |
| TTCCATTCAGAATGGCATCA+GGG | 0.602855 | 8.2:+72757041 | None:intergenic |
| TCCCTGAGTTGGTTTCTTCG+GGG | 0.603052 | 8.2:-72763751 | MS.gene92265:CDS |
| AGATCTGCTTCAATAGCTTG+TGG | 0.605138 | 8.2:-72759510 | MS.gene92265:CDS |
| AAAACCTGCAAAGCCCATTG+AGG | 0.606920 | 8.2:+72759456 | None:intergenic |
| CAATACTACTACGCTTCACA+GGG | 0.609711 | 8.2:+72758180 | None:intergenic |
| AGAGGTGTGAATCAAGCCAA+GGG | 0.613158 | 8.2:-72758415 | MS.gene92265:CDS |
| GGTTGATATATCACATCGCA+TGG | 0.613948 | 8.2:+72760105 | None:intergenic |
| TTGCAAATGGGTATTCTCAA+GGG | 0.613998 | 8.2:-72755955 | MS.gene92265:CDS |
| GTCTGTTTAGAAGCTCCTTG+TGG | 0.615021 | 8.2:+72763851 | None:intergenic |
| TGATCATTAAAACAGGCTTG+TGG | 0.616696 | 8.2:+72760043 | None:intergenic |
| GCCCCGAAGAAACCAACTCA+GGG | 0.619432 | 8.2:+72763750 | None:intergenic |
| ATAGTTTGTGCACAGCTCAA+CGG | 0.621033 | 8.2:-72759567 | MS.gene92265:CDS |
| AAGAGGTGTGAATCAAGCCA+AGG | 0.621579 | 8.2:-72758416 | MS.gene92265:CDS |
| AGCCGACTGATTCCCCAAGG+TGG | 0.622396 | 8.2:-72757076 | MS.gene92265:CDS |
| TGAATTAGCTCATGATGATG+TGG | 0.628032 | 8.2:-72756514 | MS.gene92265:CDS |
| GCCCACCTTGGGGAATCAGT+CGG | 0.628960 | 8.2:+72757074 | None:intergenic |
| TTAGCTCATGATGATGTGGA+TGG | 0.631481 | 8.2:-72756510 | MS.gene92265:CDS |
| ATTGTGGCATATGTGGTGAG+TGG | 0.631500 | 8.2:-72756211 | MS.gene92265:CDS |
| ACAAGGGGAGGATTTCACGT+TGG | 0.631639 | 8.2:-72756895 | MS.gene92265:CDS |
| TCAGCATCATTGCTATCAGT+AGG | 0.634321 | 8.2:+72761179 | None:intergenic |
| TGTGGTGAGTGGGCCCACTT+CGG | 0.634797 | 8.2:-72756200 | MS.gene92265:CDS |
| GCAGTTCATCTACACACACA+TGG | 0.635510 | 8.2:-72761265 | MS.gene92265:intron |
| AGAGGAAAAGGATAGGACAA+TGG | 0.635674 | 8.2:-72758366 | MS.gene92265:CDS |
| GCTTGAAAGAGGCACGTGCA+AGG | 0.637439 | 8.2:+72761231 | None:intergenic |
| TTCAGAATACATACAGCCGT+CGG | 0.639840 | 8.2:+72762445 | None:intergenic |
| ATGGAGTTTCTGATTCTCCG+GGG | 0.643557 | 8.2:-72757103 | MS.gene92265:CDS |
| AGACACTCACCAAGAAGGTG+TGG | 0.649077 | 8.2:+72761143 | None:intergenic |
| TGGAGTTTCTGATTCTCCGG+GGG | 0.651219 | 8.2:-72757102 | MS.gene92265:CDS |
| CCACTGAAAATAATGCGTGA+CGG | 0.651651 | 8.2:+72761694 | None:intergenic |
| GCACACCATTAACTCCAGCT+AGG | 0.652707 | 8.2:-72758331 | MS.gene92265:CDS |
| GATTAAAAGTATCAGCAATG+AGG | 0.652782 | 8.2:-72758304 | MS.gene92265:CDS |
| CCCGGTACAGACTTGCTCTG+AGG | 0.653574 | 8.2:-72758051 | MS.gene92265:intron |
| CATAGCCGACTGATTCCCCA+AGG | 0.655094 | 8.2:-72757079 | MS.gene92265:CDS |
| TCCACAGAAGCTTACAACAG+TGG | 0.659825 | 8.2:+72760989 | None:intergenic |
| TGAAAGAGGCACGTGCAAGG+TGG | 0.666954 | 8.2:+72761234 | None:intergenic |
| ATGATGCTGATAGCGATATG+GGG | 0.667822 | 8.2:-72761166 | MS.gene92265:CDS |
| CTTCGATACCACATTACCGA+CGG | 0.677069 | 8.2:-72762461 | MS.gene92265:CDS |
| AACTCGGCAAGCCCACCTTG+GGG | 0.678033 | 8.2:+72757064 | None:intergenic |
| AATAGAAGGAAGACTGCCTG+AGG | 0.683184 | 8.2:+72761064 | None:intergenic |
| CAGTTCATCTACACACACAT+GGG | 0.683334 | 8.2:-72761264 | MS.gene92265:CDS |
| TCAACGGTGAAGCAAACACA+CGG | 0.687021 | 8.2:-72759551 | MS.gene92265:CDS |
| GCTATTGAAGCAGATCTGCG+AGG | 0.710579 | 8.2:+72759516 | None:intergenic |
| TGGCACATAAGCCTCAACAT+GGG | 0.713146 | 8.2:+72758208 | None:intergenic |
| AAATTCGTAACACTACAATG+AGG | 0.721351 | 8.2:+72755995 | None:intergenic |
| GAGGTGTGAATCAAGCCAAG+GGG | 0.748167 | 8.2:-72758414 | MS.gene92265:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 72755931 | 72763888 | 72755931 | ID=MS.gene92265 |
| chr8.2 | mRNA | 72755931 | 72763888 | 72755931 | ID=MS.gene92265.t1;Parent=MS.gene92265 |
| chr8.2 | exon | 72763742 | 72763888 | 72763742 | ID=MS.gene92265.t1.exon1;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72763742 | 72763888 | 72763742 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72762459 | 72762647 | 72762459 | ID=MS.gene92265.t1.exon2;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72762459 | 72762647 | 72762459 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72761933 | 72761986 | 72761933 | ID=MS.gene92265.t1.exon3;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72761933 | 72761986 | 72761933 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72761687 | 72761775 | 72761687 | ID=MS.gene92265.t1.exon4;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72761687 | 72761775 | 72761687 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72761004 | 72761283 | 72761004 | ID=MS.gene92265.t1.exon5;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72761004 | 72761283 | 72761004 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72760644 | 72760700 | 72760644 | ID=MS.gene92265.t1.exon6;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72760644 | 72760700 | 72760644 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72760320 | 72760351 | 72760320 | ID=MS.gene92265.t1.exon7;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72760320 | 72760351 | 72760320 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72760042 | 72760177 | 72760042 | ID=MS.gene92265.t1.exon8;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72760042 | 72760177 | 72760042 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72759461 | 72759634 | 72759461 | ID=MS.gene92265.t1.exon9;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72759461 | 72759634 | 72759461 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72758052 | 72758651 | 72758052 | ID=MS.gene92265.t1.exon10;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72758052 | 72758651 | 72758052 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72757009 | 72757146 | 72757009 | ID=MS.gene92265.t1.exon11;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72757009 | 72757146 | 72757009 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72756825 | 72756923 | 72756825 | ID=MS.gene92265.t1.exon12;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72756825 | 72756923 | 72756825 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72756486 | 72756586 | 72756486 | ID=MS.gene92265.t1.exon13;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72756486 | 72756586 | 72756486 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72756166 | 72756256 | 72756166 | ID=MS.gene92265.t1.exon14;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72756166 | 72756256 | 72756166 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| chr8.2 | exon | 72755931 | 72756053 | 72755931 | ID=MS.gene92265.t1.exon15;Parent=MS.gene92265.t1 |
| chr8.2 | CDS | 72755931 | 72756053 | 72755931 | ID=cds.MS.gene92265.t1;Parent=MS.gene92265.t1 |
| Gene Sequence |
| Protein sequence |
