Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92770.t1 | XP_013449273.1 | 94.4 | 591 | 32 | 1 | 1 | 591 | 1 | 590 | 1.60E-163 | 586.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92770.t1 | A0A072UBT1 | 94.4 | 591 | 32 | 1 | 1 | 591 | 1 | 590 | 1.2e-163 | 586.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051361 | MS.gene92770 | 0.802869 | 4.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92770.t1 | MTR_7g073720 | 97.631 | 591 | 13 | 1 | 1 | 591 | 1 | 590 | 0.0 | 1118 |
| MS.gene92770.t1 | MTR_5g082480 | 36.285 | 463 | 212 | 20 | 74 | 467 | 77 | 525 | 5.75e-30 | 125 |
| MS.gene92770.t1 | MTR_5g082480 | 34.624 | 465 | 217 | 20 | 74 | 467 | 88 | 536 | 6.25e-30 | 125 |
| MS.gene92770.t1 | MTR_3g070300 | 33.984 | 512 | 177 | 24 | 74 | 467 | 88 | 556 | 8.70e-28 | 118 |
| MS.gene92770.t1 | MTR_7g068220 | 32.366 | 448 | 196 | 19 | 67 | 465 | 55 | 444 | 5.76e-24 | 105 |
| MS.gene92770.t1 | MTR_7g068220 | 31.991 | 422 | 181 | 18 | 93 | 465 | 1 | 365 | 4.62e-16 | 81.3 |
| MS.gene92770.t1 | MTR_7g068220 | 32.540 | 378 | 171 | 17 | 137 | 465 | 4 | 346 | 3.82e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92770.t1 | AT3G08670 | 58.156 | 564 | 192 | 17 | 34 | 591 | 42 | 567 | 1.46e-150 | 445 |
| MS.gene92770.t1 | AT2G40070 | 33.129 | 489 | 203 | 15 | 69 | 467 | 79 | 533 | 8.58e-35 | 139 |
| MS.gene92770.t1 | AT2G40070 | 33.129 | 489 | 203 | 15 | 69 | 467 | 39 | 493 | 2.78e-34 | 137 |
| MS.gene92770.t1 | AT2G40070 | 34.734 | 357 | 142 | 12 | 194 | 467 | 68 | 416 | 2.20e-22 | 101 |
| MS.gene92770.t1 | AT3G09000 | 37.061 | 313 | 131 | 15 | 199 | 467 | 177 | 467 | 5.24e-20 | 94.4 |
| MS.gene92770.t1 | AT3G51540 | 30.584 | 582 | 226 | 25 | 30 | 591 | 15 | 438 | 2.23e-17 | 85.5 |
| MS.gene92770.t1 | AT3G51540 | 32.456 | 228 | 100 | 8 | 373 | 591 | 199 | 381 | 2.93e-15 | 78.2 |
| MS.gene92770.t1 | AT3G51540 | 32.895 | 228 | 99 | 9 | 373 | 591 | 251 | 433 | 7.71e-15 | 77.4 |
| MS.gene92770.t1 | AT1G27850 | 33.819 | 343 | 133 | 18 | 18 | 354 | 20 | 274 | 3.16e-14 | 76.6 |
Find 181 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTAGTTTCTGTTAAAT+TGG | 0.193096 | 7.4:+30975274 | MS.gene92770:intron |
| GCTTCTTCTGTTATGGTTGA+TGG | 0.223100 | 7.4:-30974846 | None:intergenic |
| TCCTGGTGCTGGCACTTTGC+GGG | 0.254022 | 7.4:+30976831 | MS.gene92770:CDS |
| GGTGGAAACTGAACGTATTC+TGG | 0.271163 | 7.4:-30976434 | None:intergenic |
| AATGGAAGAGACTCTCTTTA+TGG | 0.272117 | 7.4:+30974821 | MS.gene92770:CDS |
| GGCTCCTTATTATTTGATAA+TGG | 0.273063 | 7.4:+30978182 | MS.gene92770:CDS |
| GATCTACTCAAACTTCTTCT+TGG | 0.297444 | 7.4:-30975850 | None:intergenic |
| AGGTATTGCTTCTTCTGTTA+TGG | 0.305972 | 7.4:-30974853 | None:intergenic |
| GTCACTGAACTGCTTCTTGC+CGG | 0.307921 | 7.4:-30976202 | None:intergenic |
| GATTTAGTTTCTGTTAAATT+GGG | 0.311220 | 7.4:+30975275 | MS.gene92770:intron |
| CCTGCAGAGAGTGGCCTATC+AGG | 0.321330 | 7.4:-30976799 | None:intergenic |
| ACGACCGAGAACACTGGATT+TGG | 0.325689 | 7.4:+30977060 | MS.gene92770:CDS |
| GAGAACCTGCCTGAGCCTTT+TGG | 0.327676 | 7.4:+30978209 | MS.gene92770:CDS |
| TTCATACTTAACAGGATATA+AGG | 0.329629 | 7.4:+30977817 | MS.gene92770:intron |
| CCTCAGTTTCATCTTACATT+AGG | 0.331598 | 7.4:+30976323 | MS.gene92770:CDS |
| GAAGATGTTGAGCGGGTTAC+TGG | 0.339971 | 7.4:-30976355 | None:intergenic |
| AAATCCATTATCAAATAATA+AGG | 0.346962 | 7.4:-30978186 | None:intergenic |
| TTCATTGAACGGACGTAGTT+CGG | 0.358363 | 7.4:+30976666 | MS.gene92770:CDS |
| CTCAAAGAAGTCCTTGGATA+TGG | 0.360316 | 7.4:+30977092 | MS.gene92770:CDS |
| GGCCATCGACTCCTAGTTCT+AGG | 0.373458 | 7.4:+30976500 | MS.gene92770:CDS |
| CCTCCCAAATCCAGTGTTCT+CGG | 0.379614 | 7.4:-30977064 | None:intergenic |
| GAGCTCTGTGATGTTGGTCT+AGG | 0.384434 | 7.4:-30976475 | None:intergenic |
| AAGCAACAGTGCGTCGTAAC+GGG | 0.385069 | 7.4:-30978102 | None:intergenic |
| GGTAGGTCCCGTCCTGGTGC+TGG | 0.397382 | 7.4:+30976820 | MS.gene92770:CDS |
| CTCCTACGAGTGGGAGTTGA+AGG | 0.403014 | 7.4:-30976583 | None:intergenic |
| GATGGGGAATGTAAGTTTGC+AGG | 0.405842 | 7.4:-30976532 | None:intergenic |
| GGTAATGTTGTTCTGAGGTT+TGG | 0.407394 | 7.4:-30976778 | None:intergenic |
| TCCATTCCTTCCATTCATCA+TGG | 0.407480 | 7.4:-30974804 | None:intergenic |
| TGAGGTTTGGTGGTGTATCA+AGG | 0.407701 | 7.4:-30976765 | None:intergenic |
| GTCCTGGTGCTGGCACTTTG+CGG | 0.412701 | 7.4:+30976830 | MS.gene92770:CDS |
| GGAAAGTCAGGTGGAACAAC+AGG | 0.413901 | 7.4:-30976742 | None:intergenic |
| GCGCGGTAAGATTGGCTCTT+GGG | 0.416563 | 7.4:-30977909 | None:intergenic |
| CGTGACAACGACCGAGTTGA+TGG | 0.417986 | 7.4:-30976559 | None:intergenic |
| GGCGGCCGGACTCGTGGACT+TGG | 0.419542 | 7.4:-30976712 | None:intergenic |
| TACTTGAAGCGCGGTAAGAT+TGG | 0.423585 | 7.4:-30977917 | None:intergenic |
| CATGTTTCCATTCGTTTCGA+TGG | 0.424815 | 7.4:-30977952 | None:intergenic |
| GTAGAATTTCGAATACTTTG+TGG | 0.425811 | 7.4:-30977885 | None:intergenic |
| AGTTTCAAGGAGATCGGTTA+AGG | 0.430454 | 7.4:+30977026 | MS.gene92770:CDS |
| GGGGCAAAACCAGCTAGAAA+TGG | 0.438130 | 7.4:+30975314 | MS.gene92770:CDS |
| ACTCGTGGACTTGGTGAGCT+TGG | 0.443163 | 7.4:-30976703 | None:intergenic |
| ACGTGGTAAATGGTATCAAC+AGG | 0.447859 | 7.4:+30978003 | MS.gene92770:CDS |
| CAAAGTGCCAGCACCAGGAC+GGG | 0.456711 | 7.4:-30976827 | None:intergenic |
| AAGATTTGAAGAATACAAAC+TGG | 0.457929 | 7.4:+30978129 | MS.gene92770:CDS |
| GATATGTTGTCATCTGTAGA+AGG | 0.460615 | 7.4:+30975344 | MS.gene92770:CDS |
| TCCTCAATCCCATTTCTAGC+TGG | 0.465340 | 7.4:-30975323 | None:intergenic |
| TCAGAACAACATTACCTGAT+AGG | 0.467626 | 7.4:+30976785 | MS.gene92770:CDS |
| GGTGTATCAAGGGGAAAGTC+AGG | 0.468615 | 7.4:-30976754 | None:intergenic |
| TGCTAGGCTCCTTACTCCCC+CGG | 0.470339 | 7.4:+30975774 | MS.gene92770:intron |
| GACTCCTAGTTCTAGGCCTC+AGG | 0.470422 | 7.4:+30976507 | MS.gene92770:CDS |
| GAGGAAAGCATGATTATGAT+TGG | 0.470423 | 7.4:+30975366 | MS.gene92770:CDS |
| GTTATCATCATGGTGGTTGT+TGG | 0.471078 | 7.4:-30974888 | None:intergenic |
| TTCTTCTCCTATTGTCAGTA+GGG | 0.472216 | 7.4:+30976900 | MS.gene92770:CDS |
| CGACCGAGAACACTGGATTT+GGG | 0.472679 | 7.4:+30977061 | MS.gene92770:CDS |
| CCGAGTTGATGGAGCGGATG+GGG | 0.472937 | 7.4:-30976548 | None:intergenic |
| GAATATGATGAGAGGAAGAG+AGG | 0.478833 | 7.4:+30978025 | MS.gene92770:CDS |
| GAAGAACTTGTTGTAGAGGA+AGG | 0.479507 | 7.4:-30976625 | None:intergenic |
| TCTTCAGATGATTCTTCTGA+TGG | 0.480146 | 7.4:+30974956 | MS.gene92770:CDS |
| ACAAGTTCTTCAATTTCAGC+TGG | 0.482784 | 7.4:+30976637 | MS.gene92770:CDS |
| CCATTCGTTTCGATGGATGT+TGG | 0.483534 | 7.4:-30977945 | None:intergenic |
| ATTCTTCTCCTATTGTCAGT+AGG | 0.484138 | 7.4:+30976899 | MS.gene92770:CDS |
| GCTCACCAAGTCCACGAGTC+CGG | 0.485243 | 7.4:+30976707 | MS.gene92770:CDS |
| GACCGAGTTGATGGAGCGGA+TGG | 0.486507 | 7.4:-30976550 | None:intergenic |
| TACAAGAGTCCAAAAGGCTC+AGG | 0.490074 | 7.4:-30978218 | None:intergenic |
| CGTGGCTTTGCCTCTGCCAA+TGG | 0.492378 | 7.4:+30976952 | MS.gene92770:CDS |
| CCCCGCAAAGTGCCAGCACC+AGG | 0.492720 | 7.4:-30976832 | None:intergenic |
| AATGTTGTTCTGAGGTTTGG+TGG | 0.493105 | 7.4:-30976775 | None:intergenic |
| GGTGAGCTTGGCCGCGATGA+CGG | 0.498388 | 7.4:-30976691 | None:intergenic |
| CTGTGAGTGTGATGTGGAGA+TGG | 0.498652 | 7.4:-30976233 | None:intergenic |
| AGCGCGGTAAGATTGGCTCT+TGG | 0.500061 | 7.4:-30977910 | None:intergenic |
| TAAGCAACAGTGCGTCGTAA+CGG | 0.502111 | 7.4:-30978103 | None:intergenic |
| GTTGTTGGAATGATGATTGA+AGG | 0.504100 | 7.4:-30974873 | None:intergenic |
| GGCCTTGAGCTCTGTGATGT+TGG | 0.504658 | 7.4:-30976481 | None:intergenic |
| GAATATCTCAAAGAAGTCCT+TGG | 0.504781 | 7.4:+30977086 | MS.gene92770:CDS |
| TTCGTTTCGATGGATGTTGG+TGG | 0.505732 | 7.4:-30977942 | None:intergenic |
| GTTCTCGGTCGTAGTGGTTG+AGG | 0.509245 | 7.4:-30977049 | None:intergenic |
| GGAACCTGAGGCCTAGAACT+AGG | 0.509877 | 7.4:-30976511 | None:intergenic |
| CTTCTACTGCTAAGGCCTCA+AGG | 0.514374 | 7.4:+30975875 | MS.gene92770:CDS |
| CAACAGGCTGTGGTGGCGGC+CGG | 0.515546 | 7.4:-30976726 | None:intergenic |
| GTGTAATCAACCATGATGAA+TGG | 0.516630 | 7.4:+30974794 | None:intergenic |
| AGAGGCTACAAGAGTCCAAA+AGG | 0.518349 | 7.4:-30978224 | None:intergenic |
| TTGGGGAGACTCTCAGTTGG+AGG | 0.519185 | 7.4:+30975293 | MS.gene92770:CDS |
| ACCATGATGAATGGAAGGAA+TGG | 0.520582 | 7.4:+30974803 | None:intergenic |
| GGGCAAAACCAGCTAGAAAT+GGG | 0.521227 | 7.4:+30975315 | MS.gene92770:CDS |
| TCTGCAGGTAGGTCCCGTCC+TGG | 0.522094 | 7.4:+30976814 | MS.gene92770:CDS |
| CTACTCAAACTTCTTCTTGG+AGG | 0.523779 | 7.4:-30975847 | None:intergenic |
| GAGGTTTGGTGGTGTATCAA+GGG | 0.525634 | 7.4:-30976764 | None:intergenic |
| CCTGGTGCTGGCACTTTGCG+GGG | 0.526734 | 7.4:+30976832 | MS.gene92770:CDS |
| CCTGATAGGCCACTCTCTGC+AGG | 0.528235 | 7.4:+30976799 | MS.gene92770:CDS |
| GGAACAACAGGCTGTGGTGG+CGG | 0.532834 | 7.4:-30976730 | None:intergenic |
| GTTAAGAATATTTGTAGAGG+AGG | 0.533254 | 7.4:-30976290 | None:intergenic |
| GAGCGGGTTACTGGGGAAGA+TGG | 0.533881 | 7.4:-30976346 | None:intergenic |
| ATGCTCCTGAGGTAGTTTCA+AGG | 0.534602 | 7.4:+30977013 | MS.gene92770:CDS |
| GCTGGACGTGTTTCATTGAA+CGG | 0.534767 | 7.4:+30976655 | MS.gene92770:CDS |
| TAGATCAACTTCTACTGCTA+AGG | 0.535623 | 7.4:+30975867 | MS.gene92770:CDS |
| GGAGCATGTGAAACTTTCCT+AGG | 0.537155 | 7.4:-30976997 | None:intergenic |
| GGCATGATGGCCATTGGCAG+AGG | 0.539524 | 7.4:-30976962 | None:intergenic |
| TATCAGGTAATGTTGTTCTG+AGG | 0.540143 | 7.4:-30976783 | None:intergenic |
| AAGATGTTGAGCGGGTTACT+GGG | 0.541062 | 7.4:-30976354 | None:intergenic |
| ACCAGCTAGAAATGGGATTG+AGG | 0.543808 | 7.4:+30975322 | MS.gene92770:CDS |
| TGAGGTAGTTTCAAGGAGAT+CGG | 0.545304 | 7.4:+30977020 | MS.gene92770:CDS |
| TGGGGAGACTCTCAGTTGGA+GGG | 0.545913 | 7.4:+30975294 | MS.gene92770:CDS |
| CCCCATCCGCTCCATCAACT+CGG | 0.546552 | 7.4:+30976548 | MS.gene92770:CDS |
| GAACGGCTCAGGAAATCATC+GGG | 0.546645 | 7.4:+30977839 | MS.gene92770:CDS |
| TGTGTTAAGAATATTTGTAG+AGG | 0.546852 | 7.4:-30976293 | None:intergenic |
| GTAGAGGAAGGAGATAGAGA+TGG | 0.547091 | 7.4:-30976613 | None:intergenic |
| ATTTAGTTTCTGTTAAATTG+GGG | 0.547188 | 7.4:+30975276 | MS.gene92770:intron |
| TTCTACTGCTAAGGCCTCAA+GGG | 0.547303 | 7.4:+30975876 | MS.gene92770:CDS |
| CAGGATATAAGGAACGGCTC+AGG | 0.547603 | 7.4:+30977828 | MS.gene92770:intron |
| ACCGAGTTGATGGAGCGGAT+GGG | 0.552441 | 7.4:-30976549 | None:intergenic |
| AACATCGGCATGATGGCCAT+TGG | 0.552805 | 7.4:-30976968 | None:intergenic |
| GGAGGCGCCAAGGTTGATTG+TGG | 0.554671 | 7.4:-30975829 | None:intergenic |
| CCTTGTTGAAGATGTTGAGC+GGG | 0.556891 | 7.4:-30976362 | None:intergenic |
| TCAGAAGAATCATCTGAAGA+AGG | 0.556963 | 7.4:-30974953 | None:intergenic |
| GATCAAGAGTGTTATCATCA+TGG | 0.556989 | 7.4:-30974898 | None:intergenic |
| GGTGACGACAAATGTGATCA+AGG | 0.562965 | 7.4:+30978161 | MS.gene92770:CDS |
| GGAACGGCTCAGGAAATCAT+CGG | 0.563311 | 7.4:+30977838 | MS.gene92770:CDS |
| GTGCGAGAGGTAGGAGTGGA+AGG | 0.563591 | 7.4:-30976385 | None:intergenic |
| ACTTCTTCTTGGAGGCGCCA+AGG | 0.563805 | 7.4:-30975839 | None:intergenic |
| TGTGGTGGCGGCCGGACTCG+TGG | 0.563948 | 7.4:-30976718 | None:intergenic |
| AATTGAAGAACTTGTTGTAG+AGG | 0.564094 | 7.4:-30976629 | None:intergenic |
| ACCACTACGACCGAGAACAC+TGG | 0.565721 | 7.4:+30977054 | MS.gene92770:CDS |
| AGAGTCCAAAAGGCTCAGGC+AGG | 0.572313 | 7.4:-30978214 | None:intergenic |
| GCTCATGAACATCGGCATGA+TGG | 0.572376 | 7.4:-30976975 | None:intergenic |
| GATGCTGTTGTGCGAGAGGT+AGG | 0.574918 | 7.4:-30976394 | None:intergenic |
| TCAGGTGGAACAACAGGCTG+TGG | 0.577041 | 7.4:-30976736 | None:intergenic |
| GGTGGAACAACAGGCTGTGG+TGG | 0.580096 | 7.4:-30976733 | None:intergenic |
| CAACAATCACTCTAGTAGAC+CGG | 0.581176 | 7.4:+30976183 | MS.gene92770:CDS |
| AATCAACCATGATGAATGGA+AGG | 0.583698 | 7.4:+30974798 | None:intergenic |
| ACGTATTCTGGAGGGTGTTG+AGG | 0.588168 | 7.4:-30976422 | None:intergenic |
| AAATGAACCACAATCAACCT+TGG | 0.592903 | 7.4:+30975822 | MS.gene92770:CDS |
| TCCAGTGTTCTCGGTCGTAG+TGG | 0.593237 | 7.4:-30977055 | None:intergenic |
| ATAGGAGAAGAATGTCGCCT+TGG | 0.593839 | 7.4:-30976889 | None:intergenic |
| GGCCTAGAACTAGGAGTCGA+TGG | 0.595719 | 7.4:-30976502 | None:intergenic |
| GCAAAGTGCCAGCACCAGGA+CGG | 0.596098 | 7.4:-30976828 | None:intergenic |
| CCTCTCGCACAACAGCATCA+AGG | 0.600553 | 7.4:+30976398 | MS.gene92770:CDS |
| GAAAGTTTCACATGCTCCTG+AGG | 0.600571 | 7.4:+30977002 | MS.gene92770:CDS |
| TGTAAGTTTGCAGGAACCTG+AGG | 0.606679 | 7.4:-30976523 | None:intergenic |
| GATCTCCTTGAAACTACCTC+AGG | 0.607656 | 7.4:-30977018 | None:intergenic |
| GTTGTACTGTGAGTGTGATG+TGG | 0.610446 | 7.4:-30976239 | None:intergenic |
| TGATGTGGAGATGGAAGAGC+GGG | 0.610628 | 7.4:-30976224 | None:intergenic |
| ATGCCGATGTTCATGAGCCT+AGG | 0.613088 | 7.4:+30976980 | MS.gene92770:CDS |
| GACCAACATCACAGAGCTCA+AGG | 0.613481 | 7.4:+30976479 | MS.gene92770:CDS |
| CTTCTCCTATTGTCAGTAGG+GGG | 0.614974 | 7.4:+30976902 | MS.gene92770:CDS |
| CCAACATCCATCGAAACGAA+TGG | 0.616440 | 7.4:+30977945 | MS.gene92770:CDS |
| CCTTGATGCTGTTGTGCGAG+AGG | 0.618072 | 7.4:-30976398 | None:intergenic |
| AATACAAACTGGCTGCATAG+TGG | 0.619893 | 7.4:+30978140 | MS.gene92770:CDS |
| ATAGGCCACTCTCTGCAGGT+AGG | 0.624588 | 7.4:+30976803 | MS.gene92770:CDS |
| GGATATGGCTATCAAGCACA+TGG | 0.628067 | 7.4:+30977107 | MS.gene92770:CDS |
| GCCTTGTTGAAGATGTTGAG+CGG | 0.628447 | 7.4:-30976363 | None:intergenic |
| TTTCCTAGGCTCATGAACAT+CGG | 0.631060 | 7.4:-30976983 | None:intergenic |
| AAATTGGGGAGACTCTCAGT+TGG | 0.631568 | 7.4:+30975290 | MS.gene92770:CDS |
| TCTTCTCCTATTGTCAGTAG+GGG | 0.634045 | 7.4:+30976901 | MS.gene92770:CDS |
| AAGCGTCGGTTAATATGCCA+AGG | 0.635693 | 7.4:+30976872 | MS.gene92770:CDS |
| CGGGACCTACCTGCAGAGAG+TGG | 0.636608 | 7.4:-30976808 | None:intergenic |
| TGGTATTGAACTCCTACGAG+TGG | 0.638063 | 7.4:-30976593 | None:intergenic |
| GTGCTTGATAGCCATATCCA+AGG | 0.638311 | 7.4:-30977103 | None:intergenic |
| AGGTTTGGTGGTGTATCAAG+GGG | 0.642877 | 7.4:-30976763 | None:intergenic |
| CCCGCTCAACATCTTCAACA+AGG | 0.643167 | 7.4:+30976362 | MS.gene92770:CDS |
| TAGTTCTGAAACACAAGCGT+CGG | 0.646208 | 7.4:+30976858 | MS.gene92770:CDS |
| ATCAACAGGAATATGATGAG+AGG | 0.648711 | 7.4:+30978017 | MS.gene92770:CDS |
| AGATGTTGAGCGGGTTACTG+GGG | 0.658354 | 7.4:-30976353 | None:intergenic |
| GTATCAAGGGGAAAGTCAGG+TGG | 0.659171 | 7.4:-30976751 | None:intergenic |
| TCCTACGAGTGGGAGTTGAA+GGG | 0.661003 | 7.4:-30976582 | None:intergenic |
| GGTATTGAACTCCTACGAGT+GGG | 0.662807 | 7.4:-30976592 | None:intergenic |
| ACTTAACAGGATATAAGGAA+CGG | 0.664333 | 7.4:+30977822 | MS.gene92770:intron |
| GGGGAGACTCTCAGTTGGAG+GGG | 0.666324 | 7.4:+30975295 | MS.gene92770:CDS |
| ATGTTGTCATCTGTAGAAGG+AGG | 0.667010 | 7.4:+30975347 | MS.gene92770:CDS |
| CAACGACCGAGTTGATGGAG+CGG | 0.669920 | 7.4:-30976554 | None:intergenic |
| GAAACTGAACGTATTCTGGA+GGG | 0.675558 | 7.4:-30976430 | None:intergenic |
| CCGAGAACACTGGATTTGGG+AGG | 0.682648 | 7.4:+30977064 | MS.gene92770:CDS |
| GAACCTGTCAGTAAAAGTCG+TGG | 0.688191 | 7.4:+30976934 | MS.gene92770:CDS |
| GCCCTTCAACTCCCACTCGT+AGG | 0.688488 | 7.4:+30976581 | MS.gene92770:CDS |
| GTAGTTCGGCGCCGTCATCG+CGG | 0.694565 | 7.4:+30976680 | MS.gene92770:CDS |
| GGAAACTGAACGTATTCTGG+AGG | 0.697081 | 7.4:-30976431 | None:intergenic |
| CAAGAGTGTTATCATCATGG+TGG | 0.709308 | 7.4:-30974895 | None:intergenic |
| GTGATGTGGAGATGGAAGAG+CGG | 0.710085 | 7.4:-30976225 | None:intergenic |
| CCTAATGTAAGATGAAACTG+AGG | 0.713466 | 7.4:-30976323 | None:intergenic |
| TTGGTGGAGTACTTGAAGCG+CGG | 0.723742 | 7.4:-30977926 | None:intergenic |
| AAGGTAAAGAAAGAGAACGA+CGG | 0.746213 | 7.4:-30974934 | None:intergenic |
| GAGGACCGCACATACCCTTG+AGG | 0.752520 | 7.4:-30975890 | None:intergenic |
| TGTTGTGCGAGAGGTAGGAG+TGG | 0.765834 | 7.4:-30976389 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAATAAAATTACTAT+TGG | + | chr7.4:30975715-30975734 | MS.gene92770:intron | 10.0% |
| !! | AATTTATCCTTAATTTATTT+AGG | - | chr7.4:30977559-30977578 | None:intergenic | 10.0% |
| !!! | TATTTTTCCTAAATAAATTA+AGG | + | chr7.4:30977549-30977568 | MS.gene92770:intron | 10.0% |
| !! | AAATCCATTATCAAATAATA+AGG | - | chr7.4:30978189-30978208 | None:intergenic | 15.0% |
| !!! | AATTTAAGTTTTTACTAGTT+TGG | + | chr7.4:30975178-30975197 | MS.gene92770:intron | 15.0% |
| !!! | ACATATAAAAAACATGTTTT+TGG | - | chr7.4:30975025-30975044 | None:intergenic | 15.0% |
| !!! | ATGGATTTTTTTTTAAAGAA+AGG | - | chr7.4:30975937-30975956 | None:intergenic | 15.0% |
| !! | AAAAAATCCATTTATGTTAC+TGG | + | chr7.4:30975946-30975965 | MS.gene92770:intron | 20.0% |
| !! | AATACAAAGGGAAAAAAAAA+AGG | - | chr7.4:30977490-30977509 | None:intergenic | 20.0% |
| !! | ATATAATTGAACTGTTCAAT+TGG | - | chr7.4:30975593-30975612 | None:intergenic | 20.0% |
| !! | ATATAGTTATAAACTATGAG+AGG | - | chr7.4:30975912-30975931 | None:intergenic | 20.0% |
| !! | CATATGGTTATTATAGATTA+TGG | + | chr7.4:30975088-30975107 | MS.gene92770:intron | 20.0% |
| !! | TGTTATTAGTAGATTGAATT+TGG | + | chr7.4:30975425-30975444 | MS.gene92770:intron | 20.0% |
| !! | TTGCAGATAAATATTTATGA+TGG | + | chr7.4:30975558-30975577 | MS.gene92770:intron | 20.0% |
| !!! | ATATTTGTTCCTTTAAAGTT+TGG | - | chr7.4:30977656-30977675 | None:intergenic | 20.0% |
| !!! | ATTTAGAATGAGAAATGAAA+AGG | - | chr7.4:30974998-30975017 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTCTGTTAAATTG+GGG | + | chr7.4:30975276-30975295 | MS.gene92770:intron | 20.0% |
| !!! | ATTTTTAGAGTACAATACAA+AGG | - | chr7.4:30977503-30977522 | None:intergenic | 20.0% |
| !!! | CAAACATATATACATTTTCA+TGG | - | chr7.4:30976010-30976029 | None:intergenic | 20.0% |
| !!! | GATTTAGTTTCTGTTAAATT+GGG | + | chr7.4:30975275-30975294 | MS.gene92770:intron | 20.0% |
| !!! | TATTTGTTCCTTTAAAGTTT+GGG | - | chr7.4:30977655-30977674 | None:intergenic | 20.0% |
| !!! | TTGTGAAAGTTTTGTTTTTT+AGG | + | chr7.4:30975144-30975163 | MS.gene92770:intron | 20.0% |
| !!! | TTTAGAATGAGAAATGAAAA+GGG | - | chr7.4:30974997-30975016 | None:intergenic | 20.0% |
| !!! | TTTTTAGAGTACAATACAAA+GGG | - | chr7.4:30977502-30977521 | None:intergenic | 20.0% |
| ! | AAGATTTGAAGAATACAAAC+TGG | + | chr7.4:30978129-30978148 | MS.gene92770:CDS | 25.0% |
| ! | TGTGTTAAGAATATTTGTAG+AGG | - | chr7.4:30976296-30976315 | None:intergenic | 25.0% |
| ! | TTAGAATGAGAAATGAAAAG+GGG | - | chr7.4:30974996-30975015 | None:intergenic | 25.0% |
| ! | TTATATCCTGTTAAGTATGA+AGG | - | chr7.4:30977818-30977837 | None:intergenic | 25.0% |
| ! | TTCATACTTAACAGGATATA+AGG | + | chr7.4:30977817-30977836 | MS.gene92770:intron | 25.0% |
| !! | AAATGACATAACCTTTTCTA+AGG | - | chr7.4:30975512-30975531 | None:intergenic | 25.0% |
| !! | AATGACATAACCTTTTCTAA+GGG | - | chr7.4:30975511-30975530 | None:intergenic | 25.0% |
| !! | GGATTTAGTTTCTGTTAAAT+TGG | + | chr7.4:30975274-30975293 | MS.gene92770:intron | 25.0% |
| !! | GTAGTTTCAAATTTTATGCA+TGG | + | chr7.4:30977208-30977227 | MS.gene92770:intron | 25.0% |
| !!! | AGTTACAGTATTTTAGTTGT+TGG | + | chr7.4:30975616-30975635 | MS.gene92770:intron | 25.0% |
| !!! | ATCATGTTTTTTTCAGCTTT+CGG | + | chr7.4:30976144-30976163 | MS.gene92770:intron | 25.0% |
| !!! | GTAGCTTTATTTCAATCATA+TGG | + | chr7.4:30975072-30975091 | MS.gene92770:intron | 25.0% |
| !!! | GTTACAGTATTTTAGTTGTT+GGG | + | chr7.4:30975617-30975636 | MS.gene92770:intron | 25.0% |
| !!! | TGAATTGATTTTGCTATTTG+TGG | + | chr7.4:30975253-30975272 | MS.gene92770:intron | 25.0% |
| AACATGCTAAGCAAAAACAA+TGG | + | chr7.4:30977969-30977988 | MS.gene92770:CDS | 30.0% | |
| AAGGATTGATGTATCATTTG+GGG | - | chr7.4:30977294-30977313 | None:intergenic | 30.0% | |
| ACAAGGATTGATGTATCATT+TGG | - | chr7.4:30977296-30977315 | None:intergenic | 30.0% | |
| ACTTAACAGGATATAAGGAA+CGG | + | chr7.4:30977822-30977841 | MS.gene92770:intron | 30.0% | |
| ATGGATACCAGTAACATAAA+TGG | - | chr7.4:30975956-30975975 | None:intergenic | 30.0% | |
| CAAGGATTGATGTATCATTT+GGG | - | chr7.4:30977295-30977314 | None:intergenic | 30.0% | |
| GATTCTCAAGTCTCAATATT+TGG | + | chr7.4:30977186-30977205 | MS.gene92770:intron | 30.0% | |
| GATTGAATTTGGCCATAATA+AGG | + | chr7.4:30975436-30975455 | MS.gene92770:intron | 30.0% | |
| GGCAGATATATTAAGTATCA+TGG | - | chr7.4:30977396-30977415 | None:intergenic | 30.0% | |
| GGCTCCTTATTATTTGATAA+TGG | + | chr7.4:30978182-30978201 | MS.gene92770:CDS | 30.0% | |
| GTAGAATTTCGAATACTTTG+TGG | - | chr7.4:30977888-30977907 | None:intergenic | 30.0% | |
| GTTAAGAATATTTGTAGAGG+AGG | - | chr7.4:30976293-30976312 | None:intergenic | 30.0% | |
| ! | TTGGGTTACTATTTGAAATG+AGG | + | chr7.4:30975635-30975654 | MS.gene92770:intron | 30.0% |
| ! | TTTTAGATCATTCCTAGATC+TGG | + | chr7.4:30975529-30975548 | MS.gene92770:intron | 30.0% |
| !! | AATTGAAGAACTTGTTGTAG+AGG | - | chr7.4:30976632-30976651 | None:intergenic | 30.0% |
| !! | TATTTTTAATCCTGCAGAAC+TGG | - | chr7.4:30977151-30977170 | None:intergenic | 30.0% |
| !!! | ATCACTGATTTTATGTTGCT+AGG | + | chr7.4:30975758-30975777 | MS.gene92770:intron | 30.0% |
| !!! | TTTTCTGATGATGGAAAAAC+CGG | - | chr7.4:30975805-30975824 | None:intergenic | 30.0% |
| AAAAAGGCTTATCTGTATCC+TGG | - | chr7.4:30977474-30977493 | None:intergenic | 35.0% | |
| AAATGAACCACAATCAACCT+TGG | + | chr7.4:30975822-30975841 | MS.gene92770:CDS | 35.0% | |
| AAGGTAAAGAAAGAGAACGA+CGG | - | chr7.4:30974937-30974956 | None:intergenic | 35.0% | |
| AATGGAAGAGACTCTCTTTA+TGG | + | chr7.4:30974821-30974840 | MS.gene92770:CDS | 35.0% | |
| ACAACCTAAGTCCAAAGATT+AGG | - | chr7.4:30977442-30977461 | None:intergenic | 35.0% | |
| ACAAGTTCTTCAATTTCAGC+TGG | + | chr7.4:30976637-30976656 | MS.gene92770:CDS | 35.0% | |
| ATCAACAGGAATATGATGAG+AGG | + | chr7.4:30978017-30978036 | MS.gene92770:CDS | 35.0% | |
| ATGGTCATAGTAGAGACATT+AGG | + | chr7.4:30977227-30977246 | MS.gene92770:intron | 35.0% | |
| ATTCTTCTCCTATTGTCAGT+AGG | + | chr7.4:30976899-30976918 | MS.gene92770:CDS | 35.0% | |
| ATTTGGCCATAATAAGGAAG+AGG | + | chr7.4:30975442-30975461 | MS.gene92770:intron | 35.0% | |
| CAACCTAAGTCCAAAGATTA+GGG | - | chr7.4:30977441-30977460 | None:intergenic | 35.0% | |
| CAAGTAATCACTAAGCTCAA+AGG | - | chr7.4:30976050-30976069 | None:intergenic | 35.0% | |
| CCTAATGTAAGATGAAACTG+AGG | - | chr7.4:30976326-30976345 | None:intergenic | 35.0% | |
| CCTCAGTTTCATCTTACATT+AGG | + | chr7.4:30976323-30976342 | MS.gene92770:CDS | 35.0% | |
| CTGCAATTATTTCCAGATCT+AGG | - | chr7.4:30975544-30975563 | None:intergenic | 35.0% | |
| CTTTGAGCTTAGTGATTACT+TGG | + | chr7.4:30976048-30976067 | MS.gene92770:intron | 35.0% | |
| GAATATCTCAAAGAAGTCCT+TGG | + | chr7.4:30977086-30977105 | MS.gene92770:CDS | 35.0% | |
| GATATGTTGTCATCTGTAGA+AGG | + | chr7.4:30975344-30975363 | MS.gene92770:CDS | 35.0% | |
| GATCTACTCAAACTTCTTCT+TGG | - | chr7.4:30975853-30975872 | None:intergenic | 35.0% | |
| GTTGTTGGAATGATGATTGA+AGG | - | chr7.4:30974876-30974895 | None:intergenic | 35.0% | |
| TAGATCAACTTCTACTGCTA+AGG | + | chr7.4:30975867-30975886 | MS.gene92770:CDS | 35.0% | |
| TATCAGGTAATGTTGTTCTG+AGG | - | chr7.4:30976786-30976805 | None:intergenic | 35.0% | |
| TCAGAACAACATTACCTGAT+AGG | + | chr7.4:30976785-30976804 | MS.gene92770:CDS | 35.0% | |
| TCAGAACCAATATGTAAGCA+TGG | - | chr7.4:30975975-30975994 | None:intergenic | 35.0% | |
| TCAGAAGAATCATCTGAAGA+AGG | - | chr7.4:30974956-30974975 | None:intergenic | 35.0% | |
| TCTTCAGATGATTCTTCTGA+TGG | + | chr7.4:30974956-30974975 | MS.gene92770:CDS | 35.0% | |
| TCTTTCCCTCTTCCTTATTA+TGG | - | chr7.4:30975451-30975470 | None:intergenic | 35.0% | |
| TGACGTTCATTTAAGTAGGT+TGG | - | chr7.4:30977269-30977288 | None:intergenic | 35.0% | |
| TGAGACTTCATGAATTAGAC+TGG | + | chr7.4:30977354-30977373 | MS.gene92770:intron | 35.0% | |
| TGGTATCCATGCTTACATAT+TGG | + | chr7.4:30975966-30975985 | MS.gene92770:intron | 35.0% | |
| TTAGCAGTTTCCCTTAGAAA+AGG | + | chr7.4:30975498-30975517 | MS.gene92770:intron | 35.0% | |
| TTCTTCTCCTATTGTCAGTA+GGG | + | chr7.4:30976900-30976919 | MS.gene92770:CDS | 35.0% | |
| TTGACACGTTGAAAATGATG+TGG | + | chr7.4:30976095-30976114 | MS.gene92770:intron | 35.0% | |
| TTTGGCCATAATAAGGAAGA+GGG | + | chr7.4:30975443-30975462 | MS.gene92770:intron | 35.0% | |
| ! | AGGTATTGCTTCTTCTGTTA+TGG | - | chr7.4:30974856-30974875 | None:intergenic | 35.0% |
| ! | ATGAAGGTACACGGTAAATT+AGG | - | chr7.4:30977802-30977821 | None:intergenic | 35.0% |
| ! | CTAACAAAGCATTACTGACA+AGG | - | chr7.4:30977313-30977332 | None:intergenic | 35.0% |
| ! | CTGTTAAGTATGAAGGTACA+CGG | - | chr7.4:30977811-30977830 | None:intergenic | 35.0% |
| ! | GAGGAAAGCATGATTATGAT+TGG | + | chr7.4:30975366-30975385 | MS.gene92770:CDS | 35.0% |
| ! | TGTGGTTCATTTTCTGATGA+TGG | - | chr7.4:30975814-30975833 | None:intergenic | 35.0% |
| !! | ACTAGTTTGGCTTTAGTCTA+TGG | + | chr7.4:30975191-30975210 | MS.gene92770:intron | 35.0% |
| !! | ATTGGTTCTGATGAGAGAAA+AGG | + | chr7.4:30975984-30976003 | MS.gene92770:intron | 35.0% |
| !! | CTTTGGACTTAGGTTGTTTT+AGG | + | chr7.4:30977445-30977464 | MS.gene92770:intron | 35.0% |
| !! | GATCAAGAGTGTTATCATCA+TGG | - | chr7.4:30974901-30974920 | None:intergenic | 35.0% |
| !! | TCTCATTTTGACGTGGTAAA+TGG | + | chr7.4:30977993-30978012 | MS.gene92770:CDS | 35.0% |
| !! | TTTCTGATGATGGAAAAACC+GGG | - | chr7.4:30975804-30975823 | None:intergenic | 35.0% |
| !!! | TTAGGTTGTTTTAGGAAACC+AGG | + | chr7.4:30977453-30977472 | MS.gene92770:intron | 35.0% |
| AATACAAACTGGCTGCATAG+TGG | + | chr7.4:30978140-30978159 | MS.gene92770:CDS | 40.0% | |
| ACGTGGTAAATGGTATCAAC+AGG | + | chr7.4:30978003-30978022 | MS.gene92770:CDS | 40.0% | |
| AGTTTCAAGGAGATCGGTTA+AGG | + | chr7.4:30977026-30977045 | MS.gene92770:CDS | 40.0% | |
| ATGTTGTCATCTGTAGAAGG+AGG | + | chr7.4:30975347-30975366 | MS.gene92770:CDS | 40.0% | |
| CAACAATCACTCTAGTAGAC+CGG | + | chr7.4:30976183-30976202 | MS.gene92770:CDS | 40.0% | |
| CACGTTGAAAATGATGTGGT+AGG | + | chr7.4:30976099-30976118 | MS.gene92770:intron | 40.0% | |
| CATCTCTGCCCAAACTTTAA+AGG | + | chr7.4:30977644-30977663 | MS.gene92770:intron | 40.0% | |
| CATGTTTCCATTCGTTTCGA+TGG | - | chr7.4:30977955-30977974 | None:intergenic | 40.0% | |
| CGTGTACCTTCATACTTAAC+AGG | + | chr7.4:30977809-30977828 | MS.gene92770:intron | 40.0% | |
| CTAAGTCCAAAGATTAGGGA+CGG | - | chr7.4:30977437-30977456 | None:intergenic | 40.0% | |
| CTAATTCATGAAGTCTCACG+AGG | - | chr7.4:30977352-30977371 | None:intergenic | 40.0% | |
| CTACTCAAACTTCTTCTTGG+AGG | - | chr7.4:30975850-30975869 | None:intergenic | 40.0% | |
| CTCAAAGAAGTCCTTGGATA+TGG | + | chr7.4:30977092-30977111 | MS.gene92770:CDS | 40.0% | |
| GAAACTGAACGTATTCTGGA+GGG | - | chr7.4:30976433-30976452 | None:intergenic | 40.0% | |
| GAATATGATGAGAGGAAGAG+AGG | + | chr7.4:30978025-30978044 | MS.gene92770:CDS | 40.0% | |
| GCTTCTTCTGTTATGGTTGA+TGG | - | chr7.4:30974849-30974868 | None:intergenic | 40.0% | |
| GGCATGACGTTCATTTAAGT+AGG | - | chr7.4:30977273-30977292 | None:intergenic | 40.0% | |
| GTTATCATCATGGTGGTTGT+TGG | - | chr7.4:30974891-30974910 | None:intergenic | 40.0% | |
| TCTTCTCCTATTGTCAGTAG+GGG | + | chr7.4:30976901-30976920 | MS.gene92770:CDS | 40.0% | |
| TGAGCTTAGTGATTACTTGG+AGG | + | chr7.4:30976051-30976070 | MS.gene92770:intron | 40.0% | |
| TGAGGTAGTTTCAAGGAGAT+CGG | + | chr7.4:30977020-30977039 | MS.gene92770:CDS | 40.0% | |
| TTCATTGAACGGACGTAGTT+CGG | + | chr7.4:30976666-30976685 | MS.gene92770:CDS | 40.0% | |
| TTTCCTAGGCTCATGAACAT+CGG | - | chr7.4:30976986-30977005 | None:intergenic | 40.0% | |
| ! | CGGAGGGAGTATAACTTTAA+TGG | - | chr7.4:30977417-30977436 | None:intergenic | 40.0% |
| !! | AATGTTGTTCTGAGGTTTGG+TGG | - | chr7.4:30976778-30976797 | None:intergenic | 40.0% |
| !! | CAAGAGTGTTATCATCATGG+TGG | - | chr7.4:30974898-30974917 | None:intergenic | 40.0% |
| !! | CAATGGATCTCATTTTGACG+TGG | + | chr7.4:30977986-30978005 | MS.gene92770:CDS | 40.0% |
| !! | CTAAGCTCAAAGGTACTAAC+TGG | - | chr7.4:30976040-30976059 | None:intergenic | 40.0% |
| !! | GAAGAACTTGTTGTAGAGGA+AGG | - | chr7.4:30976628-30976647 | None:intergenic | 40.0% |
| !! | GGTAATGTTGTTCTGAGGTT+TGG | - | chr7.4:30976781-30976800 | None:intergenic | 40.0% |
| !! | TAGTTCTGAAACACAAGCGT+CGG | + | chr7.4:30976858-30976877 | MS.gene92770:CDS | 40.0% |
| !! | TTCTGATGATGGAAAAACCG+GGG | - | chr7.4:30975803-30975822 | None:intergenic | 40.0% |
| AAATTGGGGAGACTCTCAGT+TGG | + | chr7.4:30975290-30975309 | MS.gene92770:CDS | 45.0% | |
| ACCAGCTAGAAATGGGATTG+AGG | + | chr7.4:30975322-30975341 | MS.gene92770:CDS | 45.0% | |
| ATAGGAGAAGAATGTCGCCT+TGG | - | chr7.4:30976892-30976911 | None:intergenic | 45.0% | |
| ATGCTCCTGAGGTAGTTTCA+AGG | + | chr7.4:30977013-30977032 | MS.gene92770:CDS | 45.0% | |
| CCAACATCCATCGAAACGAA+TGG | + | chr7.4:30977945-30977964 | MS.gene92770:CDS | 45.0% | |
| CCATTCGTTTCGATGGATGT+TGG | - | chr7.4:30977948-30977967 | None:intergenic | 45.0% | |
| CCTTGTTGAAGATGTTGAGC+GGG | - | chr7.4:30976365-30976384 | None:intergenic | 45.0% | |
| CGTCCCTAATCTTTGGACTT+AGG | + | chr7.4:30977435-30977454 | MS.gene92770:intron | 45.0% | |
| CTTCTCCTATTGTCAGTAGG+GGG | + | chr7.4:30976902-30976921 | MS.gene92770:CDS | 45.0% | |
| GAAAGTTTCACATGCTCCTG+AGG | + | chr7.4:30977002-30977021 | MS.gene92770:CDS | 45.0% | |
| GAACCTGTCAGTAAAAGTCG+TGG | + | chr7.4:30976934-30976953 | MS.gene92770:CDS | 45.0% | |
| GATCTCCTTGAAACTACCTC+AGG | - | chr7.4:30977021-30977040 | None:intergenic | 45.0% | |
| GATGGGGAATGTAAGTTTGC+AGG | - | chr7.4:30976535-30976554 | None:intergenic | 45.0% | |
| GCTGGACGTGTTTCATTGAA+CGG | + | chr7.4:30976655-30976674 | MS.gene92770:CDS | 45.0% | |
| GGAAACTGAACGTATTCTGG+AGG | - | chr7.4:30976434-30976453 | None:intergenic | 45.0% | |
| GGAGCATGTGAAACTTTCCT+AGG | - | chr7.4:30977000-30977019 | None:intergenic | 45.0% | |
| GGATATGGCTATCAAGCACA+TGG | + | chr7.4:30977107-30977126 | MS.gene92770:CDS | 45.0% | |
| GGGCAAAACCAGCTAGAAAT+GGG | + | chr7.4:30975315-30975334 | MS.gene92770:CDS | 45.0% | |
| GGTGACGACAAATGTGATCA+AGG | + | chr7.4:30978161-30978180 | MS.gene92770:CDS | 45.0% | |
| GGTGGAAACTGAACGTATTC+TGG | - | chr7.4:30976437-30976456 | None:intergenic | 45.0% | |
| GTAGAGGAAGGAGATAGAGA+TGG | - | chr7.4:30976616-30976635 | None:intergenic | 45.0% | |
| GTTGTACTGTGAGTGTGATG+TGG | - | chr7.4:30976242-30976261 | None:intergenic | 45.0% | |
| TAAGCAACAGTGCGTCGTAA+CGG | - | chr7.4:30978106-30978125 | None:intergenic | 45.0% | |
| TACAAGAGTCCAAAAGGCTC+AGG | - | chr7.4:30978221-30978240 | None:intergenic | 45.0% | |
| TACTTGAAGCGCGGTAAGAT+TGG | - | chr7.4:30977920-30977939 | None:intergenic | 45.0% | |
| TGTAAGTTTGCAGGAACCTG+AGG | - | chr7.4:30976526-30976545 | None:intergenic | 45.0% | |
| TTCGTTTCGATGGATGTTGG+TGG | - | chr7.4:30977945-30977964 | None:intergenic | 45.0% | |
| TTCTACTGCTAAGGCCTCAA+GGG | + | chr7.4:30975876-30975895 | MS.gene92770:CDS | 45.0% | |
| ! | AAGCCACGACTTTTACTGAC+AGG | - | chr7.4:30976940-30976959 | None:intergenic | 45.0% |
| ! | GCCTTGTTGAAGATGTTGAG+CGG | - | chr7.4:30976366-30976385 | None:intergenic | 45.0% |
| ! | GGTATTGAACTCCTACGAGT+GGG | - | chr7.4:30976595-30976614 | None:intergenic | 45.0% |
| ! | GTGCTTGATAGCCATATCCA+AGG | - | chr7.4:30977106-30977125 | None:intergenic | 45.0% |
| ! | TGGTATTGAACTCCTACGAG+TGG | - | chr7.4:30976596-30976615 | None:intergenic | 45.0% |
| !! | AAGATGTTGAGCGGGTTACT+GGG | - | chr7.4:30976357-30976376 | None:intergenic | 45.0% |
| !! | AAGCGTCGGTTAATATGCCA+AGG | + | chr7.4:30976872-30976891 | MS.gene92770:CDS | 45.0% |
| !! | AGGTTTGGTGGTGTATCAAG+GGG | - | chr7.4:30976766-30976785 | None:intergenic | 45.0% |
| !! | CTCTACTTTTCCAGTTCTGC+AGG | + | chr7.4:30977138-30977157 | MS.gene92770:intron | 45.0% |
| !! | GAGGTTTGGTGGTGTATCAA+GGG | - | chr7.4:30976767-30976786 | None:intergenic | 45.0% |
| !! | TCCTCAATCCCATTTCTAGC+TGG | - | chr7.4:30975326-30975345 | None:intergenic | 45.0% |
| !! | TGAGGTTTGGTGGTGTATCA+AGG | - | chr7.4:30976768-30976787 | None:intergenic | 45.0% |
| !! | TGGTCTAGGTTTTTCAGCAG+CGG | - | chr7.4:30976464-30976483 | None:intergenic | 45.0% |
| AACATCGGCATGATGGCCAT+TGG | - | chr7.4:30976971-30976990 | None:intergenic | 50.0% | |
| AAGCAACAGTGCGTCGTAAC+GGG | - | chr7.4:30978105-30978124 | None:intergenic | 50.0% | |
| ACGACCGAGAACACTGGATT+TGG | + | chr7.4:30977060-30977079 | MS.gene92770:CDS | 50.0% | |
| AGTCCAAAGATTAGGGACGG+AGG | - | chr7.4:30977434-30977453 | None:intergenic | 50.0% | |
| ATGCCGATGTTCATGAGCCT+AGG | + | chr7.4:30976980-30976999 | MS.gene92770:CDS | 50.0% | |
| CAGGATATAAGGAACGGCTC+AGG | + | chr7.4:30977828-30977847 | MS.gene92770:intron | 50.0% | |
| CCCGCTCAACATCTTCAACA+AGG | + | chr7.4:30976362-30976381 | MS.gene92770:CDS | 50.0% | |
| CCTCCCAAATCCAGTGTTCT+CGG | - | chr7.4:30977067-30977086 | None:intergenic | 50.0% | |
| CGACCGAGAACACTGGATTT+GGG | + | chr7.4:30977061-30977080 | MS.gene92770:CDS | 50.0% | |
| CTGTGAGTGTGATGTGGAGA+TGG | - | chr7.4:30976236-30976255 | None:intergenic | 50.0% | |
| CTTCTACTGCTAAGGCCTCA+AGG | + | chr7.4:30975875-30975894 | MS.gene92770:CDS | 50.0% | |
| GAACGGCTCAGGAAATCATC+GGG | + | chr7.4:30977839-30977858 | MS.gene92770:CDS | 50.0% | |
| GACCAACATCACAGAGCTCA+AGG | + | chr7.4:30976479-30976498 | MS.gene92770:CDS | 50.0% | |
| GATCTCCCCCTACTGACAAT+AGG | - | chr7.4:30976910-30976929 | None:intergenic | 50.0% | |
| GCTCATGAACATCGGCATGA+TGG | - | chr7.4:30976978-30976997 | None:intergenic | 50.0% | |
| GGAAAGTCAGGTGGAACAAC+AGG | - | chr7.4:30976745-30976764 | None:intergenic | 50.0% | |
| GGAACGGCTCAGGAAATCAT+CGG | + | chr7.4:30977838-30977857 | MS.gene92770:CDS | 50.0% | |
| GGGGCAAAACCAGCTAGAAA+TGG | + | chr7.4:30975314-30975333 | MS.gene92770:CDS | 50.0% | |
| GGTGTATCAAGGGGAAAGTC+AGG | - | chr7.4:30976757-30976776 | None:intergenic | 50.0% | |
| GTATCAAGGGGAAAGTCAGG+TGG | - | chr7.4:30976754-30976773 | None:intergenic | 50.0% | |
| GTCACTGAACTGCTTCTTGC+CGG | - | chr7.4:30976205-30976224 | None:intergenic | 50.0% | |
| GTCCAAAGATTAGGGACGGA+GGG | - | chr7.4:30977433-30977452 | None:intergenic | 50.0% | |
| GTGATGTGGAGATGGAAGAG+CGG | - | chr7.4:30976228-30976247 | None:intergenic | 50.0% | |
| TCCTACGAGTGGGAGTTGAA+GGG | - | chr7.4:30976585-30976604 | None:intergenic | 50.0% | |
| TGATGTGGAGATGGAAGAGC+GGG | - | chr7.4:30976227-30976246 | None:intergenic | 50.0% | |
| ! | GAGCTCTGTGATGTTGGTCT+AGG | - | chr7.4:30976478-30976497 | None:intergenic | 50.0% |
| ! | TAAGGCCTCAAGGGTATGTG+CGG | + | chr7.4:30975885-30975904 | MS.gene92770:intron | 50.0% |
| ! | TTGGTGGAGTACTTGAAGCG+CGG | - | chr7.4:30977929-30977948 | None:intergenic | 50.0% |
| !! | ACGTATTCTGGAGGGTGTTG+AGG | - | chr7.4:30976425-30976444 | None:intergenic | 50.0% |
| !! | AGATGTTGAGCGGGTTACTG+GGG | - | chr7.4:30976356-30976375 | None:intergenic | 50.0% |
| !! | GAAGATGTTGAGCGGGTTAC+TGG | - | chr7.4:30976358-30976377 | None:intergenic | 50.0% |
| ACCACTACGACCGAGAACAC+TGG | + | chr7.4:30977054-30977073 | MS.gene92770:CDS | 55.0% | |
| AGAGTCCAAAAGGCTCAGGC+AGG | - | chr7.4:30978217-30978236 | None:intergenic | 55.0% | |
| ATAGGCCACTCTCTGCAGGT+AGG | + | chr7.4:30976803-30976822 | MS.gene92770:CDS | 55.0% | |
| CCGAGAACACTGGATTTGGG+AGG | + | chr7.4:30977064-30977083 | MS.gene92770:CDS | 55.0% | |
| CCTCTCGCACAACAGCATCA+AGG | + | chr7.4:30976398-30976417 | MS.gene92770:CDS | 55.0% | |
| CCTTGATGCTGTTGTGCGAG+AGG | - | chr7.4:30976401-30976420 | None:intergenic | 55.0% | |
| CTCCCTCCGTCCCTAATCTT+TGG | + | chr7.4:30977428-30977447 | MS.gene92770:intron | 55.0% | |
| CTCCTACGAGTGGGAGTTGA+AGG | - | chr7.4:30976586-30976605 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGAGAGGT+AGG | - | chr7.4:30976397-30976416 | None:intergenic | 55.0% | |
| GGAACCTGAGGCCTAGAACT+AGG | - | chr7.4:30976514-30976533 | None:intergenic | 55.0% | |
| GGCCTAGAACTAGGAGTCGA+TGG | - | chr7.4:30976505-30976524 | None:intergenic | 55.0% | |
| GGCCTTGAGCTCTGTGATGT+TGG | - | chr7.4:30976484-30976503 | None:intergenic | 55.0% | |
| GTTCTCGGTCGTAGTGGTTG+AGG | - | chr7.4:30977052-30977071 | None:intergenic | 55.0% | |
| TCAGGTGGAACAACAGGCTG+TGG | - | chr7.4:30976739-30976758 | None:intergenic | 55.0% | |
| TCCAGTGTTCTCGGTCGTAG+TGG | - | chr7.4:30977058-30977077 | None:intergenic | 55.0% | |
| TGGGGAGACTCTCAGTTGGA+GGG | + | chr7.4:30975294-30975313 | MS.gene92770:CDS | 55.0% | |
| TGTTGTGCGAGAGGTAGGAG+TGG | - | chr7.4:30976392-30976411 | None:intergenic | 55.0% | |
| TTGGGGAGACTCTCAGTTGG+AGG | + | chr7.4:30975293-30975312 | MS.gene92770:CDS | 55.0% | |
| ! | AGCGCGGTAAGATTGGCTCT+TGG | - | chr7.4:30977913-30977932 | None:intergenic | 55.0% |
| ! | CGTGACAACGACCGAGTTGA+TGG | - | chr7.4:30976562-30976581 | None:intergenic | 55.0% |
| ! | GAGAACCTGCCTGAGCCTTT+TGG | + | chr7.4:30978209-30978228 | MS.gene92770:CDS | 55.0% |
| ! | GCGCGGTAAGATTGGCTCTT+GGG | - | chr7.4:30977912-30977931 | None:intergenic | 55.0% |
| !! | ACCGAGTTGATGGAGCGGAT+GGG | - | chr7.4:30976552-30976571 | None:intergenic | 55.0% |
| !! | ACTCGTGGACTTGGTGAGCT+TGG | - | chr7.4:30976706-30976725 | None:intergenic | 55.0% |
| !! | ACTTCTTCTTGGAGGCGCCA+AGG | - | chr7.4:30975842-30975861 | None:intergenic | 55.0% |
| !! | AGGTTTTTCAGCAGCGGAGC+TGG | - | chr7.4:30976458-30976477 | None:intergenic | 55.0% |
| !! | CAACGACCGAGTTGATGGAG+CGG | - | chr7.4:30976557-30976576 | None:intergenic | 55.0% |
| !! | GACTCCTAGTTCTAGGCCTC+AGG | + | chr7.4:30976507-30976526 | MS.gene92770:CDS | 55.0% |
| !! | GGCCATCGACTCCTAGTTCT+AGG | + | chr7.4:30976500-30976519 | MS.gene92770:CDS | 55.0% |
| !! | TTTTTCAGCAGCGGAGCTGG+TGG | - | chr7.4:30976455-30976474 | None:intergenic | 55.0% |
| ATGGAAAAACCGGGGTCCCC+GGG | - | chr7.4:30975795-30975814 | None:intergenic | 60.0% | |
| CCCCATCCGCTCCATCAACT+CGG | + | chr7.4:30976548-30976567 | MS.gene92770:CDS | 60.0% | |
| CCTGATAGGCCACTCTCTGC+AGG | + | chr7.4:30976799-30976818 | MS.gene92770:CDS | 60.0% | |
| CCTGCAGAGAGTGGCCTATC+AGG | - | chr7.4:30976802-30976821 | None:intergenic | 60.0% | |
| GAGGACCGCACATACCCTTG+AGG | - | chr7.4:30975893-30975912 | None:intergenic | 60.0% | |
| GATGGAAAAACCGGGGTCCC+CGG | - | chr7.4:30975796-30975815 | None:intergenic | 60.0% | |
| GCCCTTCAACTCCCACTCGT+AGG | + | chr7.4:30976581-30976600 | MS.gene92770:CDS | 60.0% | |
| GCTCACCAAGTCCACGAGTC+CGG | + | chr7.4:30976707-30976726 | MS.gene92770:CDS | 60.0% | |
| GGAACAACAGGCTGTGGTGG+CGG | - | chr7.4:30976733-30976752 | None:intergenic | 60.0% | |
| GGCATGATGGCCATTGGCAG+AGG | - | chr7.4:30976965-30976984 | None:intergenic | 60.0% | |
| GGGGAGACTCTCAGTTGGAG+GGG | + | chr7.4:30975295-30975314 | MS.gene92770:CDS | 60.0% | |
| GGTGGAACAACAGGCTGTGG+TGG | - | chr7.4:30976736-30976755 | None:intergenic | 60.0% | |
| GTGCGAGAGGTAGGAGTGGA+AGG | - | chr7.4:30976388-30976407 | None:intergenic | 60.0% | |
| TGCTAGGCTCCTTACTCCCC+CGG | + | chr7.4:30975774-30975793 | MS.gene92770:intron | 60.0% | |
| ! | CAAAGTGCCAGCACCAGGAC+GGG | - | chr7.4:30976830-30976849 | None:intergenic | 60.0% |
| ! | CGTGGCTTTGCCTCTGCCAA+TGG | + | chr7.4:30976952-30976971 | MS.gene92770:CDS | 60.0% |
| ! | GCAAAGTGCCAGCACCAGGA+CGG | - | chr7.4:30976831-30976850 | None:intergenic | 60.0% |
| !! | CCGAGTTGATGGAGCGGATG+GGG | - | chr7.4:30976551-30976570 | None:intergenic | 60.0% |
| !! | GACCGAGTTGATGGAGCGGA+TGG | - | chr7.4:30976553-30976572 | None:intergenic | 60.0% |
| !! | GAGCGGGTTACTGGGGAAGA+TGG | - | chr7.4:30976349-30976368 | None:intergenic | 60.0% |
| !! | GGAGGCGCCAAGGTTGATTG+TGG | - | chr7.4:30975832-30975851 | None:intergenic | 60.0% |
| !! | GTCCTGGTGCTGGCACTTTG+CGG | + | chr7.4:30976830-30976849 | MS.gene92770:CDS | 60.0% |
| !! | TCCTGGTGCTGGCACTTTGC+GGG | + | chr7.4:30976831-30976850 | MS.gene92770:CDS | 60.0% |
| CGGGACCTACCTGCAGAGAG+TGG | - | chr7.4:30976811-30976830 | None:intergenic | 65.0% | |
| CTAGGCTCCTTACTCCCCCG+GGG | + | chr7.4:30975776-30975795 | MS.gene92770:intron | 65.0% | |
| GCTAGGCTCCTTACTCCCCC+GGG | + | chr7.4:30975775-30975794 | MS.gene92770:intron | 65.0% | |
| GGTGAGCTTGGCCGCGATGA+CGG | - | chr7.4:30976694-30976713 | None:intergenic | 65.0% | |
| GTAGTTCGGCGCCGTCATCG+CGG | + | chr7.4:30976680-30976699 | MS.gene92770:CDS | 65.0% | |
| TCTGCAGGTAGGTCCCGTCC+TGG | + | chr7.4:30976814-30976833 | MS.gene92770:CDS | 65.0% | |
| TGGAAAAACCGGGGTCCCCG+GGG | - | chr7.4:30975794-30975813 | None:intergenic | 65.0% | |
| !! | CCTGGTGCTGGCACTTTGCG+GGG | + | chr7.4:30976832-30976851 | MS.gene92770:CDS | 65.0% |
| GGAAAAACCGGGGTCCCCGG+GGG | - | chr7.4:30975793-30975812 | None:intergenic | 70.0% | |
| GGTAGGTCCCGTCCTGGTGC+TGG | + | chr7.4:30976820-30976839 | MS.gene92770:CDS | 70.0% | |
| ! | CCCCGCAAAGTGCCAGCACC+AGG | - | chr7.4:30976835-30976854 | None:intergenic | 70.0% |
| !! | CAACAGGCTGTGGTGGCGGC+CGG | - | chr7.4:30976729-30976748 | None:intergenic | 70.0% |
| CCTTACTCCCCCGGGGACCC+CGG | + | chr7.4:30975783-30975802 | MS.gene92770:CDS | 75.0% | |
| GGCGGCCGGACTCGTGGACT+TGG | - | chr7.4:30976715-30976734 | None:intergenic | 75.0% | |
| !! | TGTGGTGGCGGCCGGACTCG+TGG | - | chr7.4:30976721-30976740 | None:intergenic | 75.0% |
| ! | CCGGGGTCCCCGGGGGAGTA+AGG | - | chr7.4:30975786-30975805 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30974806 | 30978241 | 30974806 | ID=MS.gene92770 |
| chr7.4 | mRNA | 30974806 | 30978241 | 30974806 | ID=MS.gene92770.t1;Parent=MS.gene92770 |
| chr7.4 | exon | 30974806 | 30974977 | 30974806 | ID=MS.gene92770.t1.exon1;Parent=MS.gene92770.t1 |
| chr7.4 | CDS | 30974806 | 30974977 | 30974806 | ID=cds.MS.gene92770.t1;Parent=MS.gene92770.t1 |
| chr7.4 | exon | 30975282 | 30975387 | 30975282 | ID=MS.gene92770.t1.exon2;Parent=MS.gene92770.t1 |
| chr7.4 | CDS | 30975282 | 30975387 | 30975282 | ID=cds.MS.gene92770.t1;Parent=MS.gene92770.t1 |
| chr7.4 | exon | 30975780 | 30975897 | 30975780 | ID=MS.gene92770.t1.exon3;Parent=MS.gene92770.t1 |
| chr7.4 | CDS | 30975780 | 30975897 | 30975780 | ID=cds.MS.gene92770.t1;Parent=MS.gene92770.t1 |
| chr7.4 | exon | 30976160 | 30977128 | 30976160 | ID=MS.gene92770.t1.exon4;Parent=MS.gene92770.t1 |
| chr7.4 | CDS | 30976160 | 30977128 | 30976160 | ID=cds.MS.gene92770.t1;Parent=MS.gene92770.t1 |
| chr7.4 | exon | 30977831 | 30978241 | 30977831 | ID=MS.gene92770.t1.exon5;Parent=MS.gene92770.t1 |
| chr7.4 | CDS | 30977831 | 30978241 | 30977831 | ID=cds.MS.gene92770.t1;Parent=MS.gene92770.t1 |
| Gene Sequence |
| Protein sequence |
