Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92826.t1 | XP_003614163.1 | 95.3 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 1.40E-283 | 984.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92826.t1 | P0C7R4 | 66.2 | 515 | 168 | 4 | 1 | 513 | 147 | 657 | 1.2e-195 | 684.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92826.t1 | G7JZ42 | 95.3 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 9.9e-284 | 984.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92826 | MS.gene29333 | PPI |
| MS.gene035805 | MS.gene92826 | PPI |
| MS.gene92826 | MS.gene050870 | PPI |
| MS.gene92826 | MS.gene064542 | PPI |
| MS.gene92826 | MS.gene050867 | PPI |
| MS.gene92826 | MS.gene072467 | PPI |
| MS.gene92826 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92826.t1 | MTR_5g045620 | 95.331 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 0.0 | 1021 |
| MS.gene92826.t1 | MTR_5g044930 | 95.136 | 514 | 25 | 0 | 1 | 514 | 151 | 664 | 0.0 | 1020 |
| MS.gene92826.t1 | MTR_4g081540 | 34.524 | 336 | 208 | 6 | 185 | 512 | 454 | 785 | 2.76e-61 | 215 |
| MS.gene92826.t1 | MTR_1g066900 | 24.476 | 572 | 357 | 13 | 10 | 512 | 136 | 701 | 8.98e-39 | 150 |
| MS.gene92826.t1 | MTR_5g459290 | 87.719 | 57 | 7 | 0 | 22 | 78 | 26 | 82 | 7.80e-30 | 112 |
| MS.gene92826.t1 | MTR_4g099200 | 23.031 | 508 | 294 | 16 | 67 | 513 | 215 | 686 | 2.16e-29 | 122 |
| MS.gene92826.t1 | MTR_1g048080 | 25.937 | 347 | 215 | 10 | 96 | 409 | 469 | 806 | 7.81e-16 | 81.3 |
| MS.gene92826.t1 | MTR_6g079920 | 22.222 | 468 | 304 | 15 | 58 | 486 | 107 | 553 | 1.72e-14 | 76.6 |
| MS.gene92826.t1 | MTR_1g068960 | 23.698 | 384 | 259 | 10 | 65 | 439 | 163 | 521 | 4.55e-14 | 75.5 |
| MS.gene92826.t1 | MTR_3g034990 | 22.940 | 449 | 282 | 16 | 5 | 414 | 82 | 505 | 5.41e-14 | 74.7 |
| MS.gene92826.t1 | MTR_6g078160 | 24.561 | 285 | 195 | 5 | 144 | 423 | 234 | 503 | 6.35e-14 | 74.7 |
| MS.gene92826.t1 | MTR_1g031720 | 23.611 | 360 | 257 | 7 | 66 | 422 | 309 | 653 | 1.81e-13 | 73.6 |
| MS.gene92826.t1 | MTR_6g079590 | 23.196 | 388 | 254 | 13 | 65 | 437 | 233 | 591 | 1.86e-13 | 73.2 |
| MS.gene92826.t1 | MTR_4g068360 | 23.464 | 358 | 226 | 11 | 67 | 406 | 250 | 577 | 2.70e-13 | 72.8 |
| MS.gene92826.t1 | MTR_6g079830 | 22.762 | 391 | 259 | 11 | 58 | 414 | 107 | 488 | 3.10e-13 | 72.8 |
| MS.gene92826.t1 | MTR_5g095130 | 23.113 | 212 | 158 | 4 | 226 | 436 | 593 | 800 | 3.49e-13 | 72.8 |
| MS.gene92826.t1 | MTR_6g022260 | 21.809 | 376 | 270 | 8 | 54 | 422 | 147 | 505 | 5.41e-13 | 71.6 |
| MS.gene92826.t1 | MTR_1g050495 | 24.585 | 301 | 201 | 6 | 144 | 437 | 236 | 517 | 1.04e-12 | 70.9 |
| MS.gene92826.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 288 | 673 | 1.19e-12 | 70.9 |
| MS.gene92826.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 149 | 534 | 1.21e-12 | 70.9 |
| MS.gene92826.t1 | MTR_1g045880 | 24.000 | 300 | 206 | 7 | 118 | 411 | 229 | 512 | 1.24e-12 | 70.9 |
| MS.gene92826.t1 | MTR_6g078190 | 22.460 | 374 | 239 | 12 | 58 | 423 | 84 | 414 | 1.43e-12 | 70.5 |
| MS.gene92826.t1 | MTR_2g037740 | 24.016 | 254 | 187 | 4 | 184 | 437 | 130 | 377 | 1.63e-12 | 70.9 |
| MS.gene92826.t1 | MTR_4g074390 | 22.343 | 367 | 245 | 8 | 86 | 437 | 216 | 557 | 1.66e-12 | 70.1 |
| MS.gene92826.t1 | MTR_4g108060 | 22.071 | 367 | 246 | 8 | 86 | 437 | 82 | 423 | 1.85e-12 | 69.7 |
| MS.gene92826.t1 | MTR_2g035630 | 22.140 | 271 | 200 | 4 | 144 | 414 | 236 | 495 | 2.63e-12 | 69.7 |
| MS.gene92826.t1 | MTR_7g091410 | 22.302 | 417 | 279 | 12 | 67 | 469 | 84 | 469 | 2.63e-12 | 69.7 |
| MS.gene92826.t1 | MTR_2g049740 | 23.362 | 351 | 222 | 9 | 90 | 406 | 215 | 552 | 2.70e-12 | 70.1 |
| MS.gene92826.t1 | MTR_3g061000 | 24.268 | 239 | 169 | 5 | 184 | 419 | 281 | 510 | 2.82e-12 | 69.3 |
| MS.gene92826.t1 | MTR_3g061000 | 23.361 | 244 | 169 | 4 | 238 | 476 | 157 | 387 | 7.28e-12 | 68.2 |
| MS.gene92826.t1 | MTR_7g103600 | 23.823 | 361 | 254 | 6 | 63 | 422 | 183 | 523 | 3.09e-12 | 69.7 |
| MS.gene92826.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 43 | 428 | 3.39e-12 | 69.3 |
| MS.gene92826.t1 | MTR_3g037490 | 21.286 | 451 | 276 | 13 | 21 | 418 | 117 | 541 | 3.93e-12 | 68.9 |
| MS.gene92826.t1 | MTR_5g090210 | 22.506 | 431 | 234 | 12 | 57 | 425 | 330 | 722 | 3.95e-12 | 69.3 |
| MS.gene92826.t1 | MTR_4g108060 | 22.071 | 367 | 246 | 8 | 86 | 437 | 216 | 557 | 3.96e-12 | 68.9 |
| MS.gene92826.t1 | MTR_4g091600 | 26.606 | 218 | 116 | 5 | 249 | 425 | 213 | 427 | 4.23e-12 | 69.3 |
| MS.gene92826.t1 | MTR_7g076550 | 25.234 | 214 | 150 | 4 | 217 | 425 | 172 | 380 | 5.20e-12 | 68.6 |
| MS.gene92826.t1 | MTR_6g065540 | 23.898 | 431 | 255 | 18 | 67 | 455 | 138 | 537 | 6.01e-12 | 68.6 |
| MS.gene92826.t1 | MTR_5g045490 | 26.749 | 243 | 168 | 5 | 220 | 461 | 320 | 553 | 6.50e-12 | 68.6 |
| MS.gene92826.t1 | MTR_6g079380 | 23.077 | 364 | 248 | 10 | 67 | 408 | 136 | 489 | 1.03e-11 | 67.8 |
| MS.gene92826.t1 | MTR_8g105170 | 25.728 | 206 | 151 | 2 | 221 | 425 | 242 | 446 | 2.00e-11 | 67.4 |
| MS.gene92826.t1 | MTR_6g079250 | 21.555 | 283 | 206 | 6 | 144 | 423 | 80 | 349 | 2.39e-11 | 65.9 |
| MS.gene92826.t1 | MTR_7g011500 | 20.727 | 275 | 202 | 4 | 180 | 454 | 223 | 481 | 2.62e-11 | 66.6 |
| MS.gene92826.t1 | MTR_7g011500 | 24.424 | 217 | 150 | 4 | 267 | 480 | 202 | 407 | 8.77e-11 | 65.1 |
| MS.gene92826.t1 | MTR_2g103520 | 24.335 | 263 | 167 | 7 | 226 | 476 | 211 | 453 | 3.40e-11 | 66.2 |
| MS.gene92826.t1 | MTR_7g007400 | 25.229 | 218 | 155 | 3 | 237 | 449 | 338 | 552 | 4.16e-11 | 65.9 |
| MS.gene92826.t1 | MTR_6g471100 | 20.958 | 334 | 238 | 9 | 81 | 405 | 288 | 604 | 4.32e-11 | 65.9 |
| MS.gene92826.t1 | MTR_6g078210 | 25.581 | 172 | 127 | 1 | 237 | 408 | 334 | 504 | 4.55e-11 | 65.5 |
| MS.gene92826.t1 | MTR_3g053350 | 24.483 | 290 | 206 | 6 | 179 | 466 | 202 | 480 | 4.97e-11 | 65.9 |
| MS.gene92826.t1 | MTR_2g026645 | 22.188 | 320 | 231 | 7 | 89 | 404 | 166 | 471 | 6.02e-11 | 65.5 |
| MS.gene92826.t1 | MTR_6g069840 | 22.286 | 350 | 248 | 10 | 67 | 410 | 195 | 526 | 7.48e-11 | 65.1 |
| MS.gene92826.t1 | MTR_6g069840 | 22.286 | 350 | 248 | 10 | 67 | 410 | 179 | 510 | 8.98e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92826.t1 | AT1G69290 | 66.085 | 516 | 169 | 4 | 1 | 514 | 147 | 658 | 0.0 | 711 |
| MS.gene92826.t1 | AT1G68980 | 59.728 | 514 | 194 | 4 | 1 | 514 | 119 | 619 | 0.0 | 627 |
| MS.gene92826.t1 | AT1G03100 | 36.202 | 337 | 202 | 7 | 185 | 513 | 462 | 793 | 2.67e-66 | 229 |
| MS.gene92826.t1 | AT3G09650 | 28.933 | 356 | 233 | 4 | 176 | 512 | 408 | 762 | 4.26e-44 | 166 |
| MS.gene92826.t1 | AT4G17616 | 24.809 | 262 | 163 | 5 | 226 | 487 | 416 | 643 | 1.18e-22 | 102 |
| MS.gene92826.t1 | AT5G64320 | 24.479 | 384 | 251 | 12 | 66 | 438 | 284 | 639 | 2.82e-17 | 85.5 |
| MS.gene92826.t1 | AT3G54980 | 24.936 | 393 | 251 | 10 | 67 | 425 | 266 | 648 | 1.10e-16 | 84.0 |
| MS.gene92826.t1 | AT3G54980 | 24.936 | 393 | 251 | 10 | 67 | 425 | 266 | 648 | 1.10e-16 | 84.0 |
| MS.gene92826.t1 | AT1G64583 | 25.833 | 360 | 224 | 8 | 80 | 405 | 115 | 465 | 1.12e-16 | 83.2 |
| MS.gene92826.t1 | AT1G64583 | 27.155 | 232 | 152 | 6 | 196 | 416 | 82 | 307 | 4.69e-11 | 65.5 |
| MS.gene92826.t1 | AT1G64583 | 25.833 | 360 | 224 | 8 | 80 | 405 | 90 | 440 | 1.73e-16 | 82.4 |
| MS.gene92826.t1 | AT1G64583 | 27.155 | 232 | 152 | 6 | 196 | 416 | 57 | 282 | 5.71e-11 | 65.1 |
| MS.gene92826.t1 | AT1G62720 | 25.538 | 372 | 242 | 12 | 67 | 430 | 137 | 481 | 8.91e-16 | 80.1 |
| MS.gene92826.t1 | AT5G04810 | 25.703 | 249 | 181 | 3 | 225 | 472 | 629 | 874 | 2.96e-14 | 76.3 |
| MS.gene92826.t1 | AT1G64100 | 25.103 | 243 | 170 | 4 | 237 | 479 | 418 | 648 | 3.14e-14 | 76.3 |
| MS.gene92826.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.07e-11 | 65.5 |
| MS.gene92826.t1 | AT1G64100 | 25.854 | 205 | 144 | 3 | 261 | 465 | 438 | 634 | 4.61e-14 | 75.5 |
| MS.gene92826.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.69e-11 | 65.1 |
| MS.gene92826.t1 | AT1G64100 | 25.854 | 205 | 144 | 3 | 261 | 465 | 438 | 634 | 4.61e-14 | 75.5 |
| MS.gene92826.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.69e-11 | 65.1 |
| MS.gene92826.t1 | AT3G53700 | 22.581 | 403 | 280 | 12 | 67 | 462 | 187 | 564 | 1.47e-13 | 73.9 |
| MS.gene92826.t1 | AT5G38730 | 26.316 | 228 | 154 | 4 | 226 | 453 | 209 | 422 | 1.47e-13 | 73.6 |
| MS.gene92826.t1 | AT1G12620 | 27.835 | 194 | 135 | 2 | 237 | 430 | 369 | 557 | 2.26e-13 | 73.2 |
| MS.gene92826.t1 | AT1G12620 | 22.626 | 358 | 258 | 9 | 76 | 429 | 114 | 456 | 5.92e-11 | 65.5 |
| MS.gene92826.t1 | AT5G39710 | 21.053 | 399 | 261 | 8 | 66 | 425 | 166 | 549 | 3.95e-13 | 72.4 |
| MS.gene92826.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene92826.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene92826.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene92826.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene92826.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene92826.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene92826.t1 | AT5G61400 | 21.136 | 317 | 210 | 5 | 141 | 425 | 95 | 403 | 6.06e-13 | 72.0 |
| MS.gene92826.t1 | AT1G62680 | 25.128 | 195 | 136 | 3 | 229 | 417 | 132 | 322 | 6.44e-13 | 71.6 |
| MS.gene92826.t1 | AT1G62680 | 25.128 | 195 | 136 | 3 | 229 | 417 | 132 | 322 | 6.44e-13 | 71.6 |
| MS.gene92826.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene92826.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene92826.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene92826.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene92826.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene92826.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene92826.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene92826.t1 | AT1G12300 | 23.864 | 264 | 185 | 5 | 171 | 430 | 322 | 573 | 1.87e-12 | 70.1 |
| MS.gene92826.t1 | AT1G12300 | 22.222 | 405 | 282 | 11 | 80 | 476 | 132 | 511 | 7.30e-12 | 68.6 |
| MS.gene92826.t1 | AT3G09060 | 23.894 | 339 | 191 | 9 | 144 | 419 | 293 | 627 | 2.00e-12 | 70.1 |
| MS.gene92826.t1 | AT3G09060 | 23.894 | 339 | 191 | 9 | 144 | 419 | 293 | 627 | 2.00e-12 | 70.1 |
| MS.gene92826.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 558 | 765 | 2.12e-12 | 70.5 |
| MS.gene92826.t1 | AT1G63230 | 25.000 | 200 | 149 | 1 | 226 | 425 | 47 | 245 | 2.35e-12 | 68.6 |
| MS.gene92826.t1 | AT4G11690 | 22.039 | 363 | 225 | 6 | 104 | 425 | 162 | 507 | 2.66e-12 | 69.7 |
| MS.gene92826.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 2.87e-12 | 70.1 |
| MS.gene92826.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 2.87e-12 | 70.1 |
| MS.gene92826.t1 | AT1G63400 | 22.195 | 401 | 287 | 10 | 80 | 476 | 129 | 508 | 2.90e-12 | 69.7 |
| MS.gene92826.t1 | AT1G63400 | 21.701 | 341 | 243 | 8 | 96 | 429 | 111 | 434 | 1.50e-11 | 67.4 |
| MS.gene92826.t1 | AT1G63400 | 25.108 | 231 | 164 | 4 | 205 | 431 | 346 | 571 | 6.13e-11 | 65.5 |
| MS.gene92826.t1 | AT1G22960 | 24.752 | 404 | 263 | 15 | 45 | 430 | 310 | 690 | 3.24e-12 | 69.7 |
| MS.gene92826.t1 | AT1G22960 | 24.752 | 404 | 263 | 15 | 45 | 430 | 310 | 690 | 3.24e-12 | 69.7 |
| MS.gene92826.t1 | AT5G61990 | 24.405 | 168 | 120 | 2 | 261 | 425 | 563 | 726 | 3.54e-12 | 69.7 |
| MS.gene92826.t1 | AT5G61990 | 22.402 | 433 | 245 | 13 | 88 | 445 | 470 | 886 | 1.19e-11 | 68.2 |
| MS.gene92826.t1 | AT3G16710 | 31.148 | 183 | 120 | 4 | 226 | 405 | 123 | 302 | 4.38e-12 | 68.9 |
| MS.gene92826.t1 | AT3G16710 | 22.812 | 377 | 240 | 11 | 67 | 406 | 116 | 478 | 1.97e-11 | 66.6 |
| MS.gene92826.t1 | AT3G16710 | 31.148 | 183 | 120 | 4 | 226 | 405 | 123 | 302 | 4.39e-12 | 68.6 |
| MS.gene92826.t1 | AT1G62670 | 23.448 | 290 | 204 | 6 | 138 | 423 | 288 | 563 | 4.60e-12 | 68.9 |
| MS.gene92826.t1 | AT1G62670 | 23.448 | 290 | 204 | 6 | 138 | 423 | 288 | 563 | 4.60e-12 | 68.9 |
| MS.gene92826.t1 | AT3G22470 | 27.778 | 234 | 154 | 6 | 238 | 469 | 368 | 588 | 5.00e-12 | 68.9 |
| MS.gene92826.t1 | AT1G63130 | 24.206 | 252 | 175 | 5 | 184 | 431 | 328 | 567 | 5.67e-12 | 68.6 |
| MS.gene92826.t1 | AT1G63130 | 20.681 | 411 | 270 | 9 | 67 | 476 | 149 | 504 | 1.79e-11 | 67.0 |
| MS.gene92826.t1 | AT1G63130 | 24.206 | 252 | 175 | 5 | 184 | 431 | 328 | 567 | 5.67e-12 | 68.6 |
| MS.gene92826.t1 | AT1G63130 | 20.681 | 411 | 270 | 9 | 67 | 476 | 149 | 504 | 1.79e-11 | 67.0 |
| MS.gene92826.t1 | AT5G50280 | 23.166 | 259 | 192 | 1 | 209 | 467 | 333 | 584 | 6.24e-12 | 68.6 |
| MS.gene92826.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 26 | 192 | 6.94e-12 | 67.8 |
| MS.gene92826.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 126 | 292 | 7.78e-12 | 68.2 |
| MS.gene92826.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 126 | 292 | 7.86e-12 | 68.2 |
| MS.gene92826.t1 | AT1G63150 | 23.707 | 232 | 162 | 3 | 226 | 456 | 229 | 446 | 9.56e-12 | 68.2 |
| MS.gene92826.t1 | AT1G63150 | 23.077 | 403 | 275 | 12 | 80 | 471 | 127 | 505 | 1.43e-11 | 67.4 |
| MS.gene92826.t1 | AT1G63150 | 23.707 | 232 | 162 | 3 | 226 | 456 | 229 | 446 | 9.56e-12 | 68.2 |
| MS.gene92826.t1 | AT1G63150 | 23.077 | 403 | 275 | 12 | 80 | 471 | 127 | 505 | 1.43e-11 | 67.4 |
| MS.gene92826.t1 | AT1G62590 | 26.087 | 230 | 161 | 4 | 206 | 431 | 347 | 571 | 1.13e-11 | 67.8 |
| MS.gene92826.t1 | AT1G62590 | 26.087 | 230 | 161 | 4 | 206 | 431 | 347 | 571 | 1.13e-11 | 67.8 |
| MS.gene92826.t1 | AT1G19520 | 21.739 | 322 | 234 | 8 | 86 | 403 | 400 | 707 | 1.14e-11 | 67.8 |
| MS.gene92826.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 156 | 480 | 1.60e-11 | 67.0 |
| MS.gene92826.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene92826.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene92826.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene92826.t1 | AT1G79080 | 23.512 | 336 | 206 | 8 | 67 | 399 | 104 | 391 | 1.87e-11 | 67.0 |
| MS.gene92826.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 81 | 405 | 1.91e-11 | 66.6 |
| MS.gene92826.t1 | AT1G62930 | 25.000 | 404 | 272 | 14 | 80 | 476 | 124 | 503 | 2.01e-11 | 67.0 |
| MS.gene92826.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene92826.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene92826.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene92826.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 351 | 585 | 2.34e-11 | 66.6 |
| MS.gene92826.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 11 | 335 | 2.77e-11 | 65.9 |
| MS.gene92826.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 367 | 601 | 3.12e-11 | 66.2 |
| MS.gene92826.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 367 | 601 | 3.12e-11 | 66.2 |
| MS.gene92826.t1 | AT1G62910 | 22.989 | 348 | 248 | 7 | 80 | 422 | 127 | 459 | 4.30e-11 | 65.9 |
| MS.gene92826.t1 | AT1G62910 | 23.715 | 253 | 175 | 6 | 184 | 431 | 330 | 569 | 4.49e-11 | 65.9 |
| MS.gene92826.t1 | AT2G39230 | 25.789 | 190 | 141 | 0 | 234 | 423 | 463 | 652 | 4.45e-11 | 66.2 |
| MS.gene92826.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 651 | 996 | 4.92e-11 | 66.2 |
| MS.gene92826.t1 | AT3G07290 | 23.562 | 365 | 256 | 10 | 54 | 414 | 359 | 704 | 5.14e-11 | 65.9 |
| MS.gene92826.t1 | AT1G12775 | 23.111 | 225 | 165 | 3 | 209 | 429 | 252 | 472 | 5.32e-11 | 65.5 |
| MS.gene92826.t1 | AT1G12775 | 22.409 | 357 | 247 | 7 | 67 | 414 | 191 | 526 | 7.81e-11 | 65.1 |
| MS.gene92826.t1 | AT3G61520 | 20.606 | 330 | 247 | 5 | 101 | 427 | 366 | 683 | 5.96e-11 | 65.5 |
| MS.gene92826.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 446 | 791 | 7.89e-11 | 65.5 |
| MS.gene92826.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 446 | 791 | 7.89e-11 | 65.5 |
| MS.gene92826.t1 | AT4G11690 | 22.997 | 287 | 179 | 6 | 180 | 425 | 195 | 480 | 9.23e-11 | 64.7 |
Find 95 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATTTATATGCACTTAA+AGG | 0.150295 | 5.2:-36392239 | MS.gene92826:CDS |
| TGGGAGGCTCTGTGGGTCTT+GGG | 0.176003 | 5.2:-36391827 | MS.gene92826:CDS |
| TTGGGAGGCTCTGTGGGTCT+TGG | 0.177689 | 5.2:-36391828 | MS.gene92826:CDS |
| TCTTCATAAGGGAAATATTA+AGG | 0.192767 | 5.2:-36391997 | MS.gene92826:CDS |
| CTCTTATTGCTTTCAAGAAT+TGG | 0.227572 | 5.2:-36391068 | MS.gene92826:CDS |
| GATTATTGAAGCTCAGAAAT+TGG | 0.273337 | 5.2:-36391961 | MS.gene92826:CDS |
| AGCTCAAAGTGGCCAGATTA+AGG | 0.274692 | 5.2:-36391116 | MS.gene92826:CDS |
| GAGATGATGACAAACAAATT+TGG | 0.280789 | 5.2:-36392061 | MS.gene92826:CDS |
| CCGAAACATATCCGTTAATC+AGG | 0.336662 | 5.2:+36391370 | None:intergenic |
| CTTCATAAGGGAAATATTAA+GGG | 0.341682 | 5.2:-36391996 | MS.gene92826:CDS |
| AAGCCAGATGAGTTTAGTTT+TGG | 0.342276 | 5.2:-36392269 | MS.gene92826:CDS |
| GGTCATTCGGCTCAAATTGC+AGG | 0.350988 | 5.2:+36391406 | None:intergenic |
| TGTTTCTATTAGAGCATCAT+AGG | 0.352643 | 5.2:+36391698 | None:intergenic |
| GTTGACGAGTCTATAGGTTT+TGG | 0.353471 | 5.2:-36391921 | MS.gene92826:CDS |
| TGAAAATATTTGTTGATAAG+TGG | 0.364460 | 5.2:-36391173 | MS.gene92826:CDS |
| GGAATGCATCAACCAGATTC+TGG | 0.365582 | 5.2:+36391262 | None:intergenic |
| CTTATTTATATGCACTTAAA+GGG | 0.372712 | 5.2:-36392238 | MS.gene92826:CDS |
| GATCAAATTTGACCAGAATC+TGG | 0.373436 | 5.2:-36391274 | MS.gene92826:CDS |
| TCTTATTGCTTTCAAGAATT+GGG | 0.377175 | 5.2:-36391067 | MS.gene92826:CDS |
| TGGTCAAATTTGATCTCCTT+CGG | 0.380909 | 5.2:+36391282 | None:intergenic |
| GACTATAATGACAGGTTTGA+TGG | 0.384239 | 5.2:-36391586 | MS.gene92826:CDS |
| GACAAGTATGTCTGGTCATT+CGG | 0.398593 | 5.2:+36391393 | None:intergenic |
| CCTGATTAACGGATATGTTT+CGG | 0.406581 | 5.2:-36391370 | MS.gene92826:CDS |
| AGACAACTGCAGGGTTGCTT+TGG | 0.409968 | 5.2:-36392420 | MS.gene92826:CDS |
| GAGATACAAGCAAGCGTTCA+TGG | 0.416295 | 5.2:-36391151 | MS.gene92826:CDS |
| GGGAGGCTCTGTGGGTCTTG+GGG | 0.421493 | 5.2:-36391826 | MS.gene92826:CDS |
| CTTGATGAGATGAATGCTTT+GGG | 0.425114 | 5.2:-36391846 | MS.gene92826:CDS |
| AACTCTATCCGCATCAGTTA+CGG | 0.428093 | 5.2:+36392319 | None:intergenic |
| ACATACTTGTCCCTGATTAA+CGG | 0.428702 | 5.2:-36391381 | MS.gene92826:CDS |
| TCTTGATGAGATGAATGCTT+TGG | 0.429748 | 5.2:-36391847 | MS.gene92826:CDS |
| CTCTGTTTAGGGACATGAGA+GGG | 0.436667 | 5.2:-36391641 | MS.gene92826:CDS |
| AACTGCGGAGGCTACTCTAT+TGG | 0.438932 | 5.2:-36391763 | MS.gene92826:CDS |
| AAACCAAAACTAAACTCATC+TGG | 0.447180 | 5.2:+36392266 | None:intergenic |
| AGTTAAGGAATATCTTCATA+AGG | 0.447351 | 5.2:-36392009 | MS.gene92826:CDS |
| GTTAATGCTTGTGTTAGTAT+TGG | 0.447831 | 5.2:-36391894 | MS.gene92826:CDS |
| ACACCGCCCCACCAATGAAA+AGG | 0.449893 | 5.2:+36392500 | None:intergenic |
| CCGCATCAGTTACGGATTCA+AGG | 0.453366 | 5.2:+36392327 | None:intergenic |
| TCTTGCATCTTCTAGCCTCC+CGG | 0.455695 | 5.2:+36391452 | None:intergenic |
| ATCAAAGTTGACGAGTCTAT+AGG | 0.458638 | 5.2:-36391927 | MS.gene92826:CDS |
| GTCTGCTAATTTAGTTTCTG+TGG | 0.461296 | 5.2:-36392114 | MS.gene92826:CDS |
| AATGCTTTGGGAGGCTCTGT+GGG | 0.462220 | 5.2:-36391834 | MS.gene92826:CDS |
| GTGACGGAGATAAGTAGTTC+AGG | 0.463218 | 5.2:-36391741 | MS.gene92826:CDS |
| GAATTACAAGCAGCAACATC+AGG | 0.464759 | 5.2:+36392374 | None:intergenic |
| TTGAGGTAGGTACTCATGAT+TGG | 0.467602 | 5.2:-36391503 | MS.gene92826:CDS |
| CGAGGGTTCTTGATTTGAAA+GGG | 0.470046 | 5.2:-36391617 | MS.gene92826:CDS |
| ACTGATGCGGATAGAGTTGT+TGG | 0.475556 | 5.2:-36392314 | MS.gene92826:CDS |
| CTGAAAGTCTTGACCGGACA+TGG | 0.478163 | 5.2:+36391674 | None:intergenic |
| GTTAAGGAATATCTTCATAA+GGG | 0.479601 | 5.2:-36392008 | MS.gene92826:CDS |
| TTGCAGTAAGCTTTCAAGAT+CGG | 0.484880 | 5.2:+36391795 | None:intergenic |
| TATGCACTTAAAGGGTTACA+AGG | 0.491051 | 5.2:-36392230 | MS.gene92826:CDS |
| GGTTGCTTTGGATGACAAGC+TGG | 0.491271 | 5.2:-36392408 | MS.gene92826:CDS |
| ATTGCTTTCAAGAATTGGGC+TGG | 0.497828 | 5.2:-36391063 | MS.gene92826:CDS |
| ATCTGGCTTAACACCAAGCT+TGG | 0.499272 | 5.2:+36392283 | None:intergenic |
| TTTCTTAGATGAGGTGGTAG+AGG | 0.503852 | 5.2:-36391535 | MS.gene92826:CDS |
| GAACCATCGACCTGAGTTGA+TGG | 0.506113 | 5.2:-36391562 | MS.gene92826:CDS |
| GGCTGCTTTCTTAGATGAGG+TGG | 0.511399 | 5.2:-36391541 | MS.gene92826:CDS |
| CACCGCCCCACCAATGAAAA+GGG | 0.511917 | 5.2:+36392501 | None:intergenic |
| TAATCAGGGACAAGTATGTC+TGG | 0.515514 | 5.2:+36391385 | None:intergenic |
| CTCCTTTGACCATAGCATAC+AGG | 0.517653 | 5.2:+36391241 | None:intergenic |
| GAATGCTTTGGGAGGCTCTG+TGG | 0.523683 | 5.2:-36391835 | MS.gene92826:CDS |
| TAGGGACATGAGAGGGGCGA+GGG | 0.531432 | 5.2:-36391634 | MS.gene92826:CDS |
| TTAGGGACATGAGAGGGGCG+AGG | 0.535492 | 5.2:-36391635 | MS.gene92826:CDS |
| CTAATAGAAACATCCATGTC+CGG | 0.537039 | 5.2:-36391687 | MS.gene92826:CDS |
| GCGAGGGTTCTTGATTTGAA+AGG | 0.543509 | 5.2:-36391618 | MS.gene92826:CDS |
| AATGAAAAGGGATAAAGAAA+CGG | 0.553013 | 5.2:+36392513 | None:intergenic |
| AAGTAGTTCAGGTCTAAAGT+TGG | 0.559965 | 5.2:-36391730 | MS.gene92826:CDS |
| TTCCTGTATGCTATGGTCAA+AGG | 0.564937 | 5.2:-36391243 | MS.gene92826:CDS |
| GGTAGAGGATCCTCGTATTG+AGG | 0.569398 | 5.2:-36391520 | MS.gene92826:CDS |
| GTTGGAATTATGTCCAAGCT+TGG | 0.570246 | 5.2:-36392296 | MS.gene92826:CDS |
| CCTTGAATCCGTAACTGATG+CGG | 0.572129 | 5.2:-36392327 | MS.gene92826:CDS |
| AGTTACTTGACTATAATGAC+AGG | 0.574269 | 5.2:-36391594 | MS.gene92826:CDS |
| GATGGCTGCTTTCTTAGATG+AGG | 0.574433 | 5.2:-36391544 | MS.gene92826:CDS |
| TGATGCATTCCTGTATGCTA+TGG | 0.578318 | 5.2:-36391250 | MS.gene92826:CDS |
| GACCGACTGAAAGTCTTGAC+CGG | 0.581684 | 5.2:+36391668 | None:intergenic |
| AAGAAAGCAGCCATCAACTC+AGG | 0.583919 | 5.2:+36391552 | None:intergenic |
| GAGGTTAAGAGAAAGTTAGC+GGG | 0.585709 | 5.2:-36391312 | MS.gene92826:CDS |
| GTGTGCTTGTTGATATTGCT+AGG | 0.590445 | 5.2:-36392481 | MS.gene92826:CDS |
| TTCAGGTCTAAAGTTGGACG+TGG | 0.606771 | 5.2:-36391724 | MS.gene92826:CDS |
| CAGCCATCAACTCAGGTCGA+TGG | 0.606962 | 5.2:+36391559 | None:intergenic |
| TCTCTGTTTAGGGACATGAG+AGG | 0.609112 | 5.2:-36391642 | MS.gene92826:CDS |
| TGATGCTGTGATGCAAGTTG+TGG | 0.610490 | 5.2:-36391211 | MS.gene92826:CDS |
| CTGTATGCTATGGTCAAAGG+AGG | 0.610526 | 5.2:-36391240 | MS.gene92826:CDS |
| GATGAGATGAATGCTTTGGG+AGG | 0.611114 | 5.2:-36391843 | MS.gene92826:CDS |
| CGAGGTTAAGAGAAAGTTAG+CGG | 0.617178 | 5.2:-36391313 | MS.gene92826:CDS |
| GAGGATCCTCGTATTGAGGT+AGG | 0.619738 | 5.2:-36391516 | MS.gene92826:CDS |
| TGTAATGATGTTGTGGAACG+AGG | 0.624533 | 5.2:-36391331 | MS.gene92826:CDS |
| TCTGTTTAGGGACATGAGAG+GGG | 0.625777 | 5.2:-36391640 | MS.gene92826:CDS |
| CGAAACATATCCGTTAATCA+GGG | 0.628051 | 5.2:+36391371 | None:intergenic |
| GGAGGCTACTCTATTGGTGA+CGG | 0.634065 | 5.2:-36391757 | MS.gene92826:CDS |
| GTCCGGTCAAGACTTTCAGT+CGG | 0.642135 | 5.2:-36391670 | MS.gene92826:CDS |
| CAAAGAGAATCGAACTGCGG+AGG | 0.652528 | 5.2:-36391775 | MS.gene92826:CDS |
| AGGTTAAGAGAAAGTTAGCG+GGG | 0.663255 | 5.2:-36391311 | MS.gene92826:CDS |
| GGTTAAGAGAAAGTTAGCGG+GGG | 0.720845 | 5.2:-36391310 | MS.gene92826:CDS |
| CTGCAAAGAGAATCGAACTG+CGG | 0.726664 | 5.2:-36391778 | MS.gene92826:CDS |
| TGAGTACCTACCTCAATACG+AGG | 0.748508 | 5.2:+36391510 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAACATTTATTGTTTT+TGG | + | chr5.2:36391462-36391481 | None:intergenic | 10.0% |
| !!! | CATTACATCAAAATATTTTT+CGG | + | chr5.2:36392278-36392297 | None:intergenic | 15.0% |
| !!! | TTTTATTCTAATTTGATTAC+TGG | - | chr5.2:36391476-36391495 | MS.gene92826:CDS | 15.0% |
| !! | CTTATTTATATGCACTTAAA+GGG | - | chr5.2:36391384-36391403 | MS.gene92826:CDS | 20.0% |
| !!! | TGAAAATATTTGTTGATAAG+TGG | - | chr5.2:36392449-36392468 | MS.gene92826:CDS | 20.0% |
| ! | AATGAAAAGGGATAAAGAAA+CGG | + | chr5.2:36391112-36391131 | None:intergenic | 25.0% |
| ! | AGTTAAGGAATATCTTCATA+AGG | - | chr5.2:36391613-36391632 | MS.gene92826:CDS | 25.0% |
| ! | CTTCATAAGGGAAATATTAA+GGG | - | chr5.2:36391626-36391645 | MS.gene92826:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | - | chr5.2:36392528-36392547 | MS.gene92826:CDS | 25.0% |
| ! | GCTTATTTATATGCACTTAA+AGG | - | chr5.2:36391383-36391402 | MS.gene92826:CDS | 25.0% |
| ! | GTTAAGGAATATCTTCATAA+GGG | - | chr5.2:36391614-36391633 | MS.gene92826:CDS | 25.0% |
| ! | TCTTATTGCTTTCAAGAATT+GGG | - | chr5.2:36392555-36392574 | MS.gene92826:CDS | 25.0% |
| ! | TCTTCATAAGGGAAATATTA+AGG | - | chr5.2:36391625-36391644 | MS.gene92826:CDS | 25.0% |
| !!! | ATTTTGATGTAATGATGTTG+TGG | - | chr5.2:36392284-36392303 | MS.gene92826:CDS | 25.0% |
| !!! | CAAATTTGGAATTTTGATAG+AGG | - | chr5.2:36391575-36391594 | MS.gene92826:CDS | 25.0% |
| !!! | CACTTTTTGTTTAGTAGTTA+AGG | - | chr5.2:36391598-36391617 | MS.gene92826:CDS | 25.0% |
| AAACCAAAACTAAACTCATC+TGG | + | chr5.2:36391359-36391378 | None:intergenic | 30.0% | |
| AGTTACTTGACTATAATGAC+AGG | - | chr5.2:36392028-36392047 | MS.gene92826:CDS | 30.0% | |
| CTCTTATTGCTTTCAAGAAT+TGG | - | chr5.2:36392554-36392573 | MS.gene92826:CDS | 30.0% | |
| GAGATGATGACAAACAAATT+TGG | - | chr5.2:36391561-36391580 | MS.gene92826:CDS | 30.0% | |
| GATTATTGAAGCTCAGAAAT+TGG | - | chr5.2:36391661-36391680 | MS.gene92826:CDS | 30.0% | |
| GTTAATGCTTGTGTTAGTAT+TGG | - | chr5.2:36391728-36391747 | MS.gene92826:CDS | 30.0% | |
| ! | ATGCAAGAAGAACTTTTAGA+AGG | - | chr5.2:36392185-36392204 | MS.gene92826:CDS | 30.0% |
| ! | GACATTCTTTTTCCTTAATC+TGG | + | chr5.2:36392521-36392540 | None:intergenic | 30.0% |
| ! | GTTTCTTTATCCCTTTTCAT+TGG | - | chr5.2:36391111-36391130 | MS.gene92826:CDS | 30.0% |
| ! | TGTTTCTATTAGAGCATCAT+AGG | + | chr5.2:36391927-36391946 | None:intergenic | 30.0% |
| !! | AAAGTTTTGATGCTTGGTTT+TGG | - | chr5.2:36391431-36391450 | MS.gene92826:CDS | 30.0% |
| !! | GAGTTAAAAGTTTTGATGCT+TGG | - | chr5.2:36391425-36391444 | MS.gene92826:CDS | 30.0% |
| AAAGAGGTAAAAAAGCAGCA+AGG | + | chr5.2:36391178-36391197 | None:intergenic | 35.0% | |
| ACATACTTGTCCCTGATTAA+CGG | - | chr5.2:36392241-36392260 | MS.gene92826:CDS | 35.0% | |
| ATCAAAGTTGACGAGTCTAT+AGG | - | chr5.2:36391695-36391714 | MS.gene92826:CDS | 35.0% | |
| ATCTGACAAGTGAAAAAGCA+GGG | + | chr5.2:36391076-36391095 | None:intergenic | 35.0% | |
| CGAAACATATCCGTTAATCA+GGG | + | chr5.2:36392254-36392273 | None:intergenic | 35.0% | |
| CTAATAGAAACATCCATGTC+CGG | - | chr5.2:36391935-36391954 | MS.gene92826:CDS | 35.0% | |
| CTTGATGAGATGAATGCTTT+GGG | - | chr5.2:36391776-36391795 | MS.gene92826:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | - | chr5.2:36392495-36392514 | MS.gene92826:CDS | 35.0% | |
| GACTATAATGACAGGTTTGA+TGG | - | chr5.2:36392036-36392055 | MS.gene92826:CDS | 35.0% | |
| GATCAAATTTGACCAGAATC+TGG | - | chr5.2:36392348-36392367 | MS.gene92826:CDS | 35.0% | |
| TATGCACTTAAAGGGTTACA+AGG | - | chr5.2:36391392-36391411 | MS.gene92826:CDS | 35.0% | |
| TCTTGATGAGATGAATGCTT+TGG | - | chr5.2:36391775-36391794 | MS.gene92826:CDS | 35.0% | |
| TGGTCAAATTTGATCTCCTT+CGG | + | chr5.2:36392343-36392362 | None:intergenic | 35.0% | |
| TTGCAGTAAGCTTTCAAGAT+CGG | + | chr5.2:36391830-36391849 | None:intergenic | 35.0% | |
| ! | AAGTAGTTCAGGTCTAAAGT+TGG | - | chr5.2:36391892-36391911 | MS.gene92826:CDS | 35.0% |
| ! | CCTGATTAACGGATATGTTT+CGG | - | chr5.2:36392252-36392271 | MS.gene92826:CDS | 35.0% |
| ! | CTTTATCCCTTTTCATTGGT+GGG | - | chr5.2:36391115-36391134 | MS.gene92826:CDS | 35.0% |
| ! | GTCTGCTAATTTAGTTTCTG+TGG | - | chr5.2:36391508-36391527 | MS.gene92826:CDS | 35.0% |
| ! | TCTTTATCCCTTTTCATTGG+TGG | - | chr5.2:36391114-36391133 | MS.gene92826:CDS | 35.0% |
| ! | TTTATCCCTTTTCATTGGTG+GGG | - | chr5.2:36391116-36391135 | MS.gene92826:CDS | 35.0% |
| !! | AAGCCAGATGAGTTTAGTTT+TGG | - | chr5.2:36391353-36391372 | MS.gene92826:CDS | 35.0% |
| !! | TCTTTTTGAAGACAACTGCA+GGG | - | chr5.2:36391193-36391212 | MS.gene92826:CDS | 35.0% |
| AACTCTATCCGCATCAGTTA+CGG | + | chr5.2:36391306-36391325 | None:intergenic | 40.0% | |
| AGGTTAAGAGAAAGTTAGCG+GGG | - | chr5.2:36392311-36392330 | MS.gene92826:CDS | 40.0% | |
| ATTGCTTTCAAGAATTGGGC+TGG | - | chr5.2:36392559-36392578 | MS.gene92826:CDS | 40.0% | |
| CCGAAACATATCCGTTAATC+AGG | + | chr5.2:36392255-36392274 | None:intergenic | 40.0% | |
| CGAGGTTAAGAGAAAGTTAG+CGG | - | chr5.2:36392309-36392328 | MS.gene92826:CDS | 40.0% | |
| CTGCAGTTGTCTTCAAAAAG+AGG | + | chr5.2:36391194-36391213 | None:intergenic | 40.0% | |
| GAATTACAAGCAGCAACATC+AGG | + | chr5.2:36391251-36391270 | None:intergenic | 40.0% | |
| GACAAGTATGTCTGGTCATT+CGG | + | chr5.2:36392232-36392251 | None:intergenic | 40.0% | |
| GAGGTTAAGAGAAAGTTAGC+GGG | - | chr5.2:36392310-36392329 | MS.gene92826:CDS | 40.0% | |
| GATCTGACAAGTGAAAAAGC+AGG | + | chr5.2:36391077-36391096 | None:intergenic | 40.0% | |
| GTTGGAATTATGTCCAAGCT+TGG | - | chr5.2:36391326-36391345 | MS.gene92826:CDS | 40.0% | |
| TAATCAGGGACAAGTATGTC+TGG | + | chr5.2:36392240-36392259 | None:intergenic | 40.0% | |
| TCTGACAAGTGAAAAAGCAG+GGG | + | chr5.2:36391075-36391094 | None:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | - | chr5.2:36392372-36392391 | MS.gene92826:CDS | 40.0% | |
| TGTAATGATGTTGTGGAACG+AGG | - | chr5.2:36392291-36392310 | MS.gene92826:CDS | 40.0% | |
| TTCCTGTATGCTATGGTCAA+AGG | - | chr5.2:36392379-36392398 | MS.gene92826:CDS | 40.0% | |
| TTGAGGTAGGTACTCATGAT+TGG | - | chr5.2:36392119-36392138 | MS.gene92826:CDS | 40.0% | |
| TTTCTTAGATGAGGTGGTAG+AGG | - | chr5.2:36392087-36392106 | MS.gene92826:CDS | 40.0% | |
| ! | AGTCGGTCTTTTCTCTGTTT+AGG | - | chr5.2:36391969-36391988 | MS.gene92826:CDS | 40.0% |
| ! | CGAGGGTTCTTGATTTGAAA+GGG | - | chr5.2:36392005-36392024 | MS.gene92826:CDS | 40.0% |
| ! | GTCGGTCTTTTCTCTGTTTA+GGG | - | chr5.2:36391970-36391989 | MS.gene92826:CDS | 40.0% |
| ! | GTGTGCTTGTTGATATTGCT+AGG | - | chr5.2:36391141-36391160 | MS.gene92826:CDS | 40.0% |
| ! | GTTGACGAGTCTATAGGTTT+TGG | - | chr5.2:36391701-36391720 | MS.gene92826:CDS | 40.0% |
| !! | ATCCACGCTTTTTGTAAAGC+CGG | - | chr5.2:36392151-36392170 | MS.gene92826:CDS | 40.0% |
| !! | CTCTTTTTGAAGACAACTGC+AGG | - | chr5.2:36391192-36391211 | MS.gene92826:CDS | 40.0% |
| AAGAAAGCAGCCATCAACTC+AGG | + | chr5.2:36392073-36392092 | None:intergenic | 45.0% | |
| ACTGATGCGGATAGAGTTGT+TGG | - | chr5.2:36391308-36391327 | MS.gene92826:CDS | 45.0% | |
| AGCTCAAAGTGGCCAGATTA+AGG | - | chr5.2:36392506-36392525 | MS.gene92826:CDS | 45.0% | |
| CCTTGAATCCGTAACTGATG+CGG | - | chr5.2:36391295-36391314 | MS.gene92826:CDS | 45.0% | |
| CTCCTTTGACCATAGCATAC+AGG | + | chr5.2:36392384-36392403 | None:intergenic | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | - | chr5.2:36391981-36392000 | MS.gene92826:CDS | 45.0% | |
| CTGACAAGTGAAAAAGCAGG+GGG | + | chr5.2:36391074-36391093 | None:intergenic | 45.0% | |
| CTGCAAAGAGAATCGAACTG+CGG | - | chr5.2:36391844-36391863 | MS.gene92826:CDS | 45.0% | |
| CTGTATGCTATGGTCAAAGG+AGG | - | chr5.2:36392382-36392401 | MS.gene92826:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | - | chr5.2:36392471-36392490 | MS.gene92826:CDS | 45.0% | |
| GGAATGCATCAACCAGATTC+TGG | + | chr5.2:36392363-36392382 | None:intergenic | 45.0% | |
| GGATTCAAGGCAAAAACAGC+AGG | + | chr5.2:36391285-36391304 | None:intergenic | 45.0% | |
| GGTTAAGAGAAAGTTAGCGG+GGG | - | chr5.2:36392312-36392331 | MS.gene92826:CDS | 45.0% | |
| TCTCTGTTTAGGGACATGAG+AGG | - | chr5.2:36391980-36391999 | MS.gene92826:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | - | chr5.2:36391982-36392001 | MS.gene92826:CDS | 45.0% | |
| TGAGTACCTACCTCAATACG+AGG | + | chr5.2:36392115-36392134 | None:intergenic | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | - | chr5.2:36392411-36392430 | MS.gene92826:CDS | 45.0% | |
| ! | ATCTGGCTTAACACCAAGCT+TGG | + | chr5.2:36391342-36391361 | None:intergenic | 45.0% |
| ! | GATGAGATGAATGCTTTGGG+AGG | - | chr5.2:36391779-36391798 | MS.gene92826:CDS | 45.0% |
| ! | GATGGCTGCTTTCTTAGATG+AGG | - | chr5.2:36392078-36392097 | MS.gene92826:CDS | 45.0% |
| ! | GCGAGGGTTCTTGATTTGAA+AGG | - | chr5.2:36392004-36392023 | MS.gene92826:CDS | 45.0% |
| ! | GTGACGGAGATAAGTAGTTC+AGG | - | chr5.2:36391881-36391900 | MS.gene92826:CDS | 45.0% |
| ! | TTCAGGTCTAAAGTTGGACG+TGG | - | chr5.2:36391898-36391917 | MS.gene92826:CDS | 45.0% |
| !! | TCCACGCTTTTTGTAAAGCC+GGG | - | chr5.2:36392152-36392171 | MS.gene92826:CDS | 45.0% |
| AACTGCGGAGGCTACTCTAT+TGG | - | chr5.2:36391859-36391878 | MS.gene92826:CDS | 50.0% | |
| AAGAGAAAGTTAGCGGGGGA+TGG | - | chr5.2:36392316-36392335 | MS.gene92826:CDS | 50.0% | |
| AGACAACTGCAGGGTTGCTT+TGG | - | chr5.2:36391202-36391221 | MS.gene92826:CDS | 50.0% | |
| AGAGAAAGTTAGCGGGGGAT+GGG | - | chr5.2:36392317-36392336 | MS.gene92826:CDS | 50.0% | |
| CAAAGAGAATCGAACTGCGG+AGG | - | chr5.2:36391847-36391866 | MS.gene92826:CDS | 50.0% | |
| CCGCATCAGTTACGGATTCA+AGG | + | chr5.2:36391298-36391317 | None:intergenic | 50.0% | |
| CTGAAAGTCTTGACCGGACA+TGG | + | chr5.2:36391951-36391970 | None:intergenic | 50.0% | |
| GACCGACTGAAAGTCTTGAC+CGG | + | chr5.2:36391957-36391976 | None:intergenic | 50.0% | |
| GAGGATCCTCGTATTGAGGT+AGG | - | chr5.2:36392106-36392125 | MS.gene92826:CDS | 50.0% | |
| GGAGGCTACTCTATTGGTGA+CGG | - | chr5.2:36391865-36391884 | MS.gene92826:CDS | 50.0% | |
| GGTAGAGGATCCTCGTATTG+AGG | - | chr5.2:36392102-36392121 | MS.gene92826:CDS | 50.0% | |
| GGTCATTCGGCTCAAATTGC+AGG | + | chr5.2:36392219-36392238 | None:intergenic | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | - | chr5.2:36391952-36391971 | MS.gene92826:CDS | 50.0% | |
| TCCCGGCTTTACAAAAAGCG+TGG | + | chr5.2:36392156-36392175 | None:intergenic | 50.0% | |
| TCTTGCATCTTCTAGCCTCC+CGG | + | chr5.2:36392173-36392192 | None:intergenic | 50.0% | |
| ! | ATCCCTTTTCATTGGTGGGG+CGG | - | chr5.2:36391119-36391138 | MS.gene92826:CDS | 50.0% |
| ! | GAACCATCGACCTGAGTTGA+TGG | - | chr5.2:36392060-36392079 | MS.gene92826:CDS | 50.0% |
| ! | GGCTGCTTTCTTAGATGAGG+TGG | - | chr5.2:36392081-36392100 | MS.gene92826:CDS | 50.0% |
| ! | GGTTGCTTTGGATGACAAGC+TGG | - | chr5.2:36391214-36391233 | MS.gene92826:CDS | 50.0% |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | - | chr5.2:36391788-36391807 | MS.gene92826:CDS | 50.0% |
| !! | ACGCTTTTTGTAAAGCCGGG+AGG | - | chr5.2:36392155-36392174 | MS.gene92826:CDS | 50.0% |
| AAAAGCAGGGGGAGCAGTGT+TGG | + | chr5.2:36391063-36391082 | None:intergenic | 55.0% | |
| ACACCGCCCCACCAATGAAA+AGG | + | chr5.2:36391125-36391144 | None:intergenic | 55.0% | |
| CACCGCCCCACCAATGAAAA+GGG | + | chr5.2:36391124-36391143 | None:intergenic | 55.0% | |
| CAGCCATCAACTCAGGTCGA+TGG | + | chr5.2:36392066-36392085 | None:intergenic | 55.0% | |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | - | chr5.2:36391787-36391806 | MS.gene92826:CDS | 55.0% |
| TAGGGACATGAGAGGGGCGA+GGG | - | chr5.2:36391988-36392007 | MS.gene92826:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | - | chr5.2:36391795-36391814 | MS.gene92826:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | - | chr5.2:36391987-36392006 | MS.gene92826:CDS | 60.0% | |
| TTGGGAGGCTCTGTGGGTCT+TGG | - | chr5.2:36391794-36391813 | MS.gene92826:CDS | 60.0% | |
| GGGAGGCTCTGTGGGTCTTG+GGG | - | chr5.2:36391796-36391815 | MS.gene92826:CDS | 65.0% | |
| ! | AGCAGGGGGAGCAGTGTTGG+CGG | + | chr5.2:36391060-36391079 | None:intergenic | 65.0% |
| GTTAGCGGGGGATGGGCCGA+AGG | - | chr5.2:36392324-36392343 | MS.gene92826:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 36391050 | 36392594 | 36391050 | ID=MS.gene92826 |
| chr5.2 | mRNA | 36391050 | 36392594 | 36391050 | ID=MS.gene92826.t1;Parent=MS.gene92826 |
| chr5.2 | exon | 36391050 | 36392594 | 36391050 | ID=MS.gene92826.t1.exon1;Parent=MS.gene92826.t1 |
| chr5.2 | CDS | 36391050 | 36392594 | 36391050 | ID=cds.MS.gene92826.t1;Parent=MS.gene92826.t1 |
| Gene Sequence |
| Protein sequence |
