Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92868.t1 | RHN72162.1 | 92.1 | 605 | 43 | 2 | 1 | 602 | 1 | 603 | 0.00E+00 | 1088.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92868.t1 | P26413 | 67.9 | 613 | 172 | 6 | 1 | 596 | 1 | 605 | 1.9e-232 | 806.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92868.t1 | A0A396J4A8 | 92.1 | 605 | 43 | 2 | 1 | 602 | 1 | 603 | 0.0e+00 | 1088.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053646 | MS.gene92868 | 0.806296 | 8.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92868.t1 | MTR_2g017730 | 91.901 | 605 | 44 | 2 | 1 | 602 | 1 | 603 | 0.0 | 1136 |
| MS.gene92868.t1 | MTR_4g130540 | 68.189 | 613 | 170 | 6 | 1 | 596 | 1 | 605 | 0.0 | 853 |
| MS.gene92868.t1 | MTR_4g063710 | 66.667 | 606 | 177 | 6 | 8 | 596 | 9 | 606 | 0.0 | 815 |
| MS.gene92868.t1 | MTR_4g063720 | 66.337 | 606 | 179 | 6 | 8 | 596 | 9 | 606 | 0.0 | 810 |
| MS.gene92868.t1 | MTR_7g024390 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 807 |
| MS.gene92868.t1 | MTR_7g099680 | 65.677 | 606 | 183 | 6 | 8 | 596 | 9 | 606 | 0.0 | 803 |
| MS.gene92868.t1 | MTR_7g024580 | 66.007 | 606 | 181 | 6 | 8 | 596 | 9 | 606 | 0.0 | 801 |
| MS.gene92868.t1 | MTR_6g033850 | 54.833 | 600 | 245 | 6 | 8 | 590 | 9 | 599 | 0.0 | 660 |
| MS.gene92868.t1 | MTR_8g099795 | 55.426 | 599 | 236 | 8 | 2 | 581 | 32 | 618 | 0.0 | 649 |
| MS.gene92868.t1 | MTR_6g033760 | 55.500 | 600 | 241 | 6 | 8 | 590 | 9 | 599 | 0.0 | 647 |
| MS.gene92868.t1 | MTR_7g025820 | 58.185 | 562 | 220 | 7 | 5 | 561 | 6 | 557 | 0.0 | 646 |
| MS.gene92868.t1 | MTR_8g099945 | 54.682 | 598 | 240 | 8 | 3 | 581 | 33 | 618 | 0.0 | 646 |
| MS.gene92868.t1 | MTR_5g066800 | 53.600 | 625 | 250 | 9 | 8 | 602 | 9 | 623 | 0.0 | 638 |
| MS.gene92868.t1 | MTR_7g026030 | 56.584 | 562 | 228 | 9 | 8 | 564 | 9 | 559 | 0.0 | 635 |
| MS.gene92868.t1 | MTR_7g021440 | 54.516 | 609 | 248 | 9 | 8 | 597 | 9 | 607 | 0.0 | 632 |
| MS.gene92868.t1 | MTR_7g025760 | 56.406 | 562 | 230 | 7 | 5 | 561 | 6 | 557 | 0.0 | 632 |
| MS.gene92868.t1 | MTR_2g038260 | 53.883 | 618 | 255 | 10 | 5 | 602 | 6 | 613 | 0.0 | 630 |
| MS.gene92868.t1 | MTR_7g025720 | 56.351 | 559 | 228 | 8 | 8 | 561 | 9 | 556 | 0.0 | 623 |
| MS.gene92868.t1 | MTR_7g451380 | 57.194 | 563 | 227 | 6 | 8 | 565 | 9 | 562 | 0.0 | 622 |
| MS.gene92868.t1 | MTR_2g032550 | 53.234 | 603 | 253 | 9 | 7 | 589 | 9 | 602 | 0.0 | 620 |
| MS.gene92868.t1 | MTR_8g032650 | 56.887 | 559 | 225 | 8 | 8 | 561 | 9 | 556 | 0.0 | 620 |
| MS.gene92868.t1 | MTR_7g025790 | 56.050 | 562 | 231 | 8 | 5 | 561 | 6 | 556 | 0.0 | 620 |
| MS.gene92868.t1 | MTR_6g033955 | 51.901 | 605 | 264 | 7 | 5 | 589 | 6 | 603 | 0.0 | 614 |
| MS.gene92868.t1 | MTR_7g025770 | 52.683 | 615 | 261 | 10 | 8 | 602 | 9 | 613 | 0.0 | 613 |
| MS.gene92868.t1 | MTR_7g026110 | 52.053 | 609 | 261 | 10 | 8 | 597 | 9 | 605 | 0.0 | 612 |
| MS.gene92868.t1 | MTR_6g033870 | 52.483 | 604 | 263 | 7 | 5 | 589 | 7 | 605 | 0.0 | 612 |
| MS.gene92868.t1 | MTR_7g025740 | 52.922 | 616 | 255 | 9 | 8 | 597 | 9 | 615 | 0.0 | 611 |
| MS.gene92868.t1 | MTR_7g026090 | 55.300 | 566 | 236 | 8 | 8 | 568 | 9 | 562 | 0.0 | 611 |
| MS.gene92868.t1 | MTR_7g025620 | 54.804 | 562 | 238 | 8 | 8 | 564 | 9 | 559 | 0.0 | 608 |
| MS.gene92868.t1 | MTR_7g029415 | 53.055 | 622 | 261 | 11 | 1 | 602 | 9 | 619 | 0.0 | 608 |
| MS.gene92868.t1 | MTR_7g024030 | 54.626 | 562 | 239 | 8 | 5 | 561 | 6 | 556 | 0.0 | 607 |
| MS.gene92868.t1 | MTR_6g033820 | 51.974 | 608 | 268 | 7 | 1 | 589 | 1 | 603 | 0.0 | 607 |
| MS.gene92868.t1 | MTR_7g078190 | 55.846 | 573 | 228 | 11 | 8 | 573 | 9 | 563 | 0.0 | 606 |
| MS.gene92868.t1 | MTR_2g022050 | 52.195 | 615 | 265 | 9 | 8 | 602 | 9 | 614 | 0.0 | 601 |
| MS.gene92868.t1 | MTR_7g026170 | 52.342 | 619 | 263 | 11 | 5 | 602 | 6 | 613 | 0.0 | 598 |
| MS.gene92868.t1 | MTR_7g011590 | 52.080 | 601 | 246 | 10 | 8 | 589 | 9 | 586 | 0.0 | 597 |
| MS.gene92868.t1 | MTR_4g079590 | 51.545 | 615 | 268 | 10 | 8 | 602 | 9 | 613 | 0.0 | 597 |
| MS.gene92868.t1 | MTR_8g103930 | 51.129 | 620 | 247 | 11 | 8 | 597 | 11 | 604 | 0.0 | 588 |
| MS.gene92868.t1 | MTR_7g078210 | 55.536 | 560 | 228 | 9 | 8 | 559 | 9 | 555 | 0.0 | 584 |
| MS.gene92868.t1 | MTR_7g025630 | 53.846 | 559 | 228 | 10 | 8 | 561 | 9 | 542 | 0.0 | 582 |
| MS.gene92868.t1 | MTR_2g437440 | 50.404 | 619 | 260 | 9 | 4 | 602 | 5 | 596 | 0.0 | 581 |
| MS.gene92868.t1 | MTR_7g074460 | 51.724 | 609 | 247 | 9 | 8 | 597 | 9 | 589 | 0.0 | 578 |
| MS.gene92868.t1 | MTR_7g026140 | 53.534 | 566 | 232 | 8 | 5 | 565 | 6 | 545 | 0.0 | 570 |
| MS.gene92868.t1 | MTR_2g038270 | 50.000 | 624 | 271 | 13 | 9 | 602 | 10 | 622 | 0.0 | 570 |
| MS.gene92868.t1 | MTR_7g026130 | 50.804 | 622 | 271 | 10 | 5 | 602 | 6 | 616 | 0.0 | 567 |
| MS.gene92868.t1 | MTR_2g032580 | 50.669 | 598 | 251 | 9 | 8 | 599 | 9 | 568 | 0.0 | 560 |
| MS.gene92868.t1 | MTR_4g027145 | 49.287 | 631 | 276 | 13 | 5 | 602 | 6 | 625 | 0.0 | 554 |
| MS.gene92868.t1 | MTR_1g017130 | 47.317 | 615 | 256 | 10 | 7 | 602 | 8 | 573 | 0.0 | 546 |
| MS.gene92868.t1 | MTR_7g025260 | 52.820 | 532 | 236 | 7 | 38 | 564 | 11 | 532 | 0.0 | 542 |
| MS.gene92868.t1 | MTR_7g451360 | 51.423 | 562 | 206 | 7 | 8 | 567 | 9 | 505 | 0.0 | 532 |
| MS.gene92868.t1 | MTR_7g007000 | 50.973 | 565 | 217 | 8 | 7 | 565 | 8 | 518 | 0.0 | 528 |
| MS.gene92868.t1 | MTR_6g033800 | 52.408 | 519 | 219 | 7 | 89 | 590 | 1 | 508 | 0.0 | 525 |
| MS.gene92868.t1 | MTR_2g040220 | 54.328 | 543 | 174 | 8 | 8 | 541 | 1018 | 1495 | 3.13e-177 | 543 |
| MS.gene92868.t1 | MTR_7g035155 | 46.602 | 618 | 246 | 13 | 5 | 602 | 6 | 559 | 6.54e-171 | 498 |
| MS.gene92868.t1 | MTR_1g041565 | 46.732 | 612 | 222 | 15 | 8 | 597 | 5 | 534 | 1.13e-167 | 489 |
| MS.gene92868.t1 | MTR_2g040370 | 66.324 | 389 | 121 | 4 | 8 | 396 | 1029 | 1407 | 1.42e-166 | 519 |
| MS.gene92868.t1 | MTR_2g040370 | 65.206 | 388 | 124 | 6 | 8 | 394 | 1413 | 1790 | 4.11e-152 | 479 |
| MS.gene92868.t1 | MTR_2g040370 | 66.324 | 389 | 121 | 4 | 8 | 396 | 1029 | 1407 | 1.89e-166 | 519 |
| MS.gene92868.t1 | MTR_2g040370 | 65.206 | 388 | 124 | 6 | 8 | 394 | 1413 | 1790 | 5.17e-152 | 479 |
| MS.gene92868.t1 | MTR_2g040260 | 62.000 | 400 | 142 | 5 | 8 | 407 | 1038 | 1427 | 1.99e-161 | 499 |
| MS.gene92868.t1 | MTR_2g010020 | 45.868 | 593 | 276 | 16 | 9 | 583 | 57 | 622 | 3.82e-160 | 474 |
| MS.gene92868.t1 | MTR_2g032160 | 61.067 | 375 | 136 | 4 | 8 | 380 | 9 | 375 | 4.25e-160 | 466 |
| MS.gene92868.t1 | MTR_2g010020 | 45.868 | 593 | 276 | 16 | 9 | 583 | 58 | 623 | 4.79e-160 | 474 |
| MS.gene92868.t1 | MTR_4g092920 | 44.444 | 603 | 295 | 14 | 6 | 591 | 51 | 630 | 2.59e-156 | 464 |
| MS.gene92868.t1 | MTR_2g040160 | 62.000 | 400 | 142 | 5 | 8 | 407 | 1109 | 1498 | 2.76e-156 | 486 |
| MS.gene92868.t1 | MTR_2g040350 | 58.911 | 404 | 152 | 6 | 8 | 407 | 820 | 1213 | 1.30e-148 | 460 |
| MS.gene92868.t1 | MTR_2g040350 | 58.911 | 404 | 152 | 6 | 8 | 407 | 1038 | 1431 | 1.01e-146 | 460 |
| MS.gene92868.t1 | MTR_2g005690 | 44.923 | 581 | 286 | 14 | 7 | 575 | 70 | 628 | 1.46e-145 | 437 |
| MS.gene92868.t1 | MTR_4g092920 | 44.316 | 519 | 250 | 13 | 89 | 591 | 1 | 496 | 6.63e-130 | 392 |
| MS.gene92868.t1 | MTR_6g034005 | 45.582 | 498 | 238 | 11 | 79 | 563 | 2 | 479 | 5.82e-129 | 395 |
| MS.gene92868.t1 | MTR_4g063720 | 60.000 | 320 | 107 | 4 | 294 | 596 | 220 | 535 | 2.46e-124 | 379 |
| MS.gene92868.t1 | MTR_4g063720 | 64.074 | 270 | 73 | 4 | 8 | 266 | 9 | 265 | 3.31e-110 | 342 |
| MS.gene92868.t1 | MTR_1g077230 | 62.278 | 281 | 100 | 3 | 5 | 283 | 6 | 282 | 6.13e-119 | 354 |
| MS.gene92868.t1 | MTR_7g026080 | 64.435 | 239 | 81 | 2 | 8 | 244 | 9 | 245 | 1.29e-105 | 319 |
| MS.gene92868.t1 | MTR_4g088515 | 43.478 | 437 | 151 | 9 | 7 | 441 | 275 | 617 | 1.29e-98 | 313 |
| MS.gene92868.t1 | MTR_6g033810 | 47.904 | 334 | 117 | 5 | 89 | 422 | 15 | 291 | 3.57e-93 | 288 |
| MS.gene92868.t1 | MTR_2g031670 | 55.731 | 253 | 108 | 2 | 14 | 264 | 37 | 287 | 2.24e-92 | 288 |
| MS.gene92868.t1 | MTR_2g031670 | 55.844 | 77 | 28 | 4 | 339 | 415 | 270 | 340 | 8.08e-14 | 73.6 |
| MS.gene92868.t1 | MTR_7g026050 | 41.176 | 374 | 174 | 6 | 244 | 602 | 1 | 343 | 6.58e-84 | 266 |
| MS.gene92868.t1 | MTR_6g033855 | 42.746 | 386 | 123 | 9 | 83 | 465 | 9 | 299 | 4.30e-83 | 263 |
| MS.gene92868.t1 | MTR_4g012050 | 33.632 | 446 | 272 | 6 | 9 | 441 | 4 | 438 | 5.83e-74 | 253 |
| MS.gene92868.t1 | MTR_2g102180 | 31.656 | 477 | 300 | 8 | 9 | 470 | 4 | 469 | 1.50e-72 | 249 |
| MS.gene92868.t1 | MTR_2g017710 | 51.527 | 262 | 43 | 3 | 224 | 485 | 17 | 194 | 3.39e-68 | 223 |
| MS.gene92868.t1 | MTR_1207s0010 | 60.556 | 180 | 66 | 3 | 105 | 284 | 1 | 175 | 3.96e-68 | 219 |
| MS.gene92868.t1 | MTR_6g478100 | 51.515 | 231 | 95 | 4 | 35 | 265 | 10 | 223 | 2.94e-66 | 219 |
| MS.gene92868.t1 | MTR_5g006180 | 30.966 | 507 | 306 | 13 | 8 | 498 | 29 | 507 | 7.67e-66 | 225 |
| MS.gene92868.t1 | MTR_3g051300 | 29.167 | 504 | 335 | 8 | 9 | 502 | 4 | 495 | 7.80e-65 | 227 |
| MS.gene92868.t1 | MTR_5g097190 | 47.036 | 253 | 83 | 5 | 5 | 255 | 155 | 358 | 1.14e-64 | 216 |
| MS.gene92868.t1 | MTR_5g092570 | 30.889 | 450 | 291 | 7 | 9 | 452 | 4 | 439 | 1.36e-63 | 223 |
| MS.gene92868.t1 | MTR_4g107920 | 30.315 | 508 | 316 | 12 | 9 | 500 | 21 | 506 | 6.72e-57 | 201 |
| MS.gene92868.t1 | MTR_4g115780 | 31.499 | 527 | 328 | 13 | 8 | 512 | 140 | 655 | 2.06e-56 | 202 |
| MS.gene92868.t1 | MTR_1g077240 | 47.347 | 245 | 120 | 5 | 323 | 564 | 1 | 239 | 1.98e-55 | 189 |
| MS.gene92868.t1 | MTR_5g090110 | 30.078 | 512 | 272 | 16 | 8 | 486 | 28 | 486 | 1.70e-52 | 188 |
| MS.gene92868.t1 | MTR_3g081170 | 26.554 | 531 | 346 | 11 | 6 | 502 | 24 | 544 | 2.18e-51 | 190 |
| MS.gene92868.t1 | MTR_2g040355 | 32.439 | 410 | 128 | 9 | 188 | 597 | 2 | 262 | 5.49e-45 | 162 |
| MS.gene92868.t1 | MTR_7g026180 | 64.228 | 123 | 42 | 1 | 75 | 197 | 23 | 143 | 2.11e-44 | 161 |
| MS.gene92868.t1 | MTR_5g005890 | 39.827 | 231 | 84 | 5 | 71 | 300 | 5 | 181 | 3.08e-43 | 153 |
| MS.gene92868.t1 | MTR_6g033910 | 40.807 | 223 | 77 | 5 | 61 | 281 | 9 | 178 | 3.14e-42 | 150 |
| MS.gene92868.t1 | MTR_5g005870 | 35.556 | 270 | 160 | 6 | 299 | 563 | 68 | 328 | 2.43e-41 | 155 |
| MS.gene92868.t1 | MTR_6g033805 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 4.25e-28 | 107 |
| MS.gene92868.t1 | MTR_7g074540 | 34.896 | 192 | 107 | 3 | 423 | 597 | 1 | 191 | 2.64e-27 | 109 |
| MS.gene92868.t1 | MTR_4g027235 | 65.714 | 70 | 22 | 1 | 5 | 72 | 6 | 75 | 2.15e-25 | 100 |
| MS.gene92868.t1 | MTR_4g027085 | 65.714 | 70 | 22 | 1 | 5 | 72 | 6 | 75 | 2.15e-25 | 100 |
| MS.gene92868.t1 | MTR_1g116250 | 31.317 | 281 | 132 | 9 | 343 | 600 | 41 | 283 | 2.52e-25 | 106 |
| MS.gene92868.t1 | MTR_7g451390 | 36.416 | 173 | 94 | 3 | 445 | 602 | 15 | 186 | 1.82e-23 | 98.6 |
| MS.gene92868.t1 | MTR_1g068900 | 38.411 | 151 | 82 | 4 | 420 | 565 | 14 | 158 | 2.52e-23 | 97.4 |
| MS.gene92868.t1 | MTR_7g026190 | 45.918 | 98 | 40 | 2 | 289 | 386 | 9 | 93 | 4.68e-20 | 89.4 |
| MS.gene92868.t1 | MTR_4g115860 | 38.462 | 91 | 53 | 1 | 404 | 491 | 30 | 120 | 1.46e-14 | 70.9 |
| MS.gene92868.t1 | MTR_7g026095 | 41.111 | 90 | 35 | 2 | 85 | 174 | 189 | 260 | 1.32e-13 | 72.8 |
| MS.gene92868.t1 | MTR_7g026095 | 34.646 | 127 | 73 | 4 | 448 | 564 | 208 | 334 | 1.65e-12 | 69.7 |
| MS.gene92868.t1 | MTR_2g017700 | 59.375 | 64 | 23 | 2 | 455 | 517 | 3 | 64 | 5.76e-13 | 64.3 |
| MS.gene92868.t1 | MTR_7g021430 | 29.412 | 187 | 114 | 4 | 214 | 389 | 1 | 180 | 9.14e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92868.t1 | AT1G16030 | 66.884 | 613 | 178 | 6 | 1 | 596 | 1 | 605 | 0.0 | 829 |
| MS.gene92868.t1 | AT3G12580 | 66.886 | 607 | 176 | 6 | 8 | 597 | 9 | 607 | 0.0 | 811 |
| MS.gene92868.t1 | AT5G02500 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 804 |
| MS.gene92868.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 796 |
| MS.gene92868.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 796 |
| MS.gene92868.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 796 |
| MS.gene92868.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 796 |
| MS.gene92868.t1 | AT5G02490 | 65.239 | 607 | 186 | 6 | 8 | 597 | 9 | 607 | 0.0 | 792 |
| MS.gene92868.t1 | AT1G56410 | 64.793 | 605 | 190 | 7 | 8 | 597 | 9 | 605 | 0.0 | 782 |
| MS.gene92868.t1 | AT5G42020 | 55.700 | 614 | 241 | 8 | 2 | 596 | 31 | 632 | 0.0 | 670 |
| MS.gene92868.t1 | AT5G42020 | 55.700 | 614 | 241 | 8 | 2 | 596 | 36 | 637 | 0.0 | 669 |
| MS.gene92868.t1 | AT5G28540 | 55.537 | 614 | 242 | 8 | 2 | 596 | 31 | 632 | 0.0 | 668 |
| MS.gene92868.t1 | AT1G09080 | 55.611 | 606 | 239 | 7 | 9 | 596 | 53 | 646 | 0.0 | 649 |
| MS.gene92868.t1 | AT1G09080 | 55.611 | 606 | 239 | 7 | 9 | 596 | 43 | 636 | 0.0 | 649 |
| MS.gene92868.t1 | AT5G42020 | 51.833 | 600 | 231 | 11 | 2 | 596 | 31 | 577 | 0.0 | 583 |
| MS.gene92868.t1 | AT5G02500 | 70.051 | 394 | 110 | 4 | 8 | 401 | 9 | 394 | 0.0 | 566 |
| MS.gene92868.t1 | AT5G02500 | 45.652 | 92 | 36 | 1 | 520 | 597 | 386 | 477 | 8.85e-16 | 80.9 |
| MS.gene92868.t1 | AT5G09590 | 45.812 | 585 | 278 | 15 | 9 | 577 | 60 | 621 | 1.91e-155 | 462 |
| MS.gene92868.t1 | AT4G37910 | 46.140 | 570 | 269 | 13 | 9 | 563 | 55 | 601 | 3.39e-150 | 449 |
| MS.gene92868.t1 | AT4G37910 | 46.140 | 570 | 269 | 13 | 9 | 563 | 55 | 601 | 3.39e-150 | 449 |
| MS.gene92868.t1 | AT4G24280 | 44.750 | 581 | 287 | 15 | 7 | 575 | 79 | 637 | 3.46e-145 | 437 |
| MS.gene92868.t1 | AT5G49910 | 44.234 | 581 | 290 | 14 | 7 | 575 | 79 | 637 | 8.83e-145 | 436 |
| MS.gene92868.t1 | AT1G79930 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 1.33e-77 | 262 |
| MS.gene92868.t1 | AT1G79930 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 3.58e-77 | 261 |
| MS.gene92868.t1 | AT1G79920 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 1.03e-76 | 258 |
| MS.gene92868.t1 | AT1G79920 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 1.71e-76 | 258 |
| MS.gene92868.t1 | AT1G79920 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 1.71e-76 | 258 |
| MS.gene92868.t1 | AT1G79920 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 1.71e-76 | 258 |
| MS.gene92868.t1 | AT1G11660 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 9.49e-73 | 248 |
| MS.gene92868.t1 | AT1G11660 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 9.49e-73 | 248 |
| MS.gene92868.t1 | AT1G11660 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 9.49e-73 | 248 |
| MS.gene92868.t1 | AT2G32120 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 4.30e-65 | 223 |
| MS.gene92868.t1 | AT2G32120 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 4.30e-65 | 223 |
| MS.gene92868.t1 | AT1G11660 | 28.247 | 616 | 367 | 17 | 44 | 602 | 2 | 599 | 1.02e-63 | 223 |
| MS.gene92868.t1 | AT4G16660 | 26.154 | 455 | 303 | 8 | 5 | 436 | 23 | 467 | 9.52e-49 | 182 |
| MS.gene92868.t1 | AT4G16660 | 26.154 | 455 | 303 | 8 | 5 | 436 | 47 | 491 | 1.15e-48 | 182 |
Find 119 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATTGCTGAAACTTATT+TGG | 0.082085 | 3.4:-20596216 | MS.gene92868:CDS |
| CATGGTGTTGTCTAAATTAA+AGG | 0.157364 | 3.4:-20596237 | MS.gene92868:CDS |
| TCAAAACAAATATTGATATT+TGG | 0.181030 | 3.4:+20595165 | None:intergenic |
| TTGATATTTGGAACCTTTCT+AGG | 0.182799 | 3.4:+20595177 | None:intergenic |
| ACTGCAGCTGCTATTGCTTA+TGG | 0.208608 | 3.4:-20596065 | MS.gene92868:CDS |
| TGGTTTGGAACAACCTTAAA+AGG | 0.212043 | 3.4:+20596332 | None:intergenic |
| TGTTGATGTTAATGGAATTT+TGG | 0.222928 | 3.4:-20595142 | MS.gene92868:CDS |
| GTTTCAACACCAAGACTAAA+AGG | 0.273894 | 3.4:+20595378 | None:intergenic |
| CAGTGAGAATTCCAAAGCTT+TGG | 0.318063 | 3.4:-20595823 | MS.gene92868:CDS |
| CCTGATGAAGCTGTGGCTTA+TGG | 0.330474 | 3.4:-20595477 | MS.gene92868:CDS |
| AATGTTCTTGTCTTTGATCT+TGG | 0.331932 | 3.4:-20596008 | MS.gene92868:CDS |
| AGTGAGAATTCCAAAGCTTT+GGG | 0.334628 | 3.4:-20595822 | MS.gene92868:CDS |
| GAAATTGCTGAAACTTATTT+GGG | 0.342870 | 3.4:-20596215 | MS.gene92868:CDS |
| ACACGGTTCCCTTGGTCGTT+TGG | 0.354947 | 3.4:+20596515 | None:intergenic |
| CGAAGGAATGTTCCAGGTTA+AGG | 0.357597 | 3.4:-20595949 | MS.gene92868:CDS |
| GAGGGATGCCGAGCGGTATA+AGG | 0.359508 | 3.4:-20595022 | MS.gene92868:CDS |
| TTCAGTAGTTGTTGAATCTT+CGG | 0.360449 | 3.4:+20595552 | None:intergenic |
| ACTTTGGGAGATACTCATTT+GGG | 0.360641 | 3.4:-20595924 | MS.gene92868:CDS |
| TTCCAGGTTAAGGCCACTTT+GGG | 0.364020 | 3.4:-20595939 | MS.gene92868:CDS |
| ACCGATACTGAAAGATTAAT+AGG | 0.373414 | 3.4:-20596470 | MS.gene92868:CDS |
| AGCTGCTATTGCTTATGGTT+TGG | 0.376546 | 3.4:-20596060 | MS.gene92868:CDS |
| CACTTTGGGAGATACTCATT+TGG | 0.379211 | 3.4:-20595925 | MS.gene92868:CDS |
| ACTCATCAATTTCTGCCAAT+TGG | 0.383486 | 3.4:+20594869 | None:intergenic |
| TTATGTCTTGTTGGACTGAT+TGG | 0.384773 | 3.4:+20596363 | None:intergenic |
| TCCAACAAGACATAAGGTTT+TGG | 0.384795 | 3.4:-20596355 | MS.gene92868:CDS |
| AGGCAGAGGATGAGGAGGTT+AGG | 0.400721 | 3.4:-20595002 | MS.gene92868:CDS |
| TCTTAACCTCCCCAAAGCTT+TGG | 0.400779 | 3.4:+20595812 | None:intergenic |
| ACTCAACCTTCCCTCCTTGT+TGG | 0.402188 | 3.4:+20595068 | None:intergenic |
| CAATAACAAATTCATGAACT+TGG | 0.402514 | 3.4:+20595595 | None:intergenic |
| CTTGTCTTTGATCTTGGTGG+TGG | 0.402810 | 3.4:-20596002 | MS.gene92868:CDS |
| GCCAAAACCTTATGTCTTGT+TGG | 0.404961 | 3.4:+20596354 | None:intergenic |
| TTTGATGCCAAACGTTTGAT+TGG | 0.412646 | 3.4:-20596401 | MS.gene92868:CDS |
| GTTCTTGTCTTTGATCTTGG+TGG | 0.414303 | 3.4:-20596005 | MS.gene92868:CDS |
| GTTCATGAATTTGTTATTGT+CGG | 0.430114 | 3.4:-20595591 | MS.gene92868:CDS |
| TTTGATCAAAACTTTACCTT+GGG | 0.431046 | 3.4:+20595278 | None:intergenic |
| AGAATTATGTTTATGAAATG+AGG | 0.432257 | 3.4:-20594951 | MS.gene92868:CDS |
| GTAGGGATCCTAGTATTCTT+CGG | 0.433514 | 3.4:+20595327 | None:intergenic |
| ATGAAATGAGGGAGAGAGTG+AGG | 0.434187 | 3.4:-20594939 | MS.gene92868:CDS |
| TTTGTAATTGACAACAATCA+TGG | 0.440479 | 3.4:+20596298 | None:intergenic |
| CTCCCAAAGTGGCCTTAACC+TGG | 0.442345 | 3.4:+20595937 | None:intergenic |
| TGTTGACGAAGGAATGTTCC+AGG | 0.444778 | 3.4:-20595955 | MS.gene92868:CDS |
| GTTCCAGGTTAAGGCCACTT+TGG | 0.448544 | 3.4:-20595940 | MS.gene92868:CDS |
| TCGGTGAAGGCAACGTAAGA+AGG | 0.448873 | 3.4:+20596488 | None:intergenic |
| GGATGAGGAGGTTAGGAAGA+AGG | 0.449706 | 3.4:-20594995 | MS.gene92868:CDS |
| GATTGAAGGCTTATTGCTGT+TGG | 0.451601 | 3.4:-20595409 | MS.gene92868:CDS |
| ATGCTCTTTAGTACCTAGAA+AGG | 0.452071 | 3.4:-20595190 | MS.gene92868:CDS |
| CCATAAGCCACAGCTTCATC+AGG | 0.453102 | 3.4:+20595477 | None:intergenic |
| ATCATTCTTCTCATCTCTTG+AGG | 0.461303 | 3.4:+20595045 | None:intergenic |
| AGTCTTGGTGTTGAAACTAA+AGG | 0.463181 | 3.4:-20595372 | MS.gene92868:CDS |
| TATGAAATAATTCAACAAGA+TGG | 0.465475 | 3.4:+20595871 | None:intergenic |
| ACTGCTGAAGATAAGACAAA+AGG | 0.472237 | 3.4:-20595114 | MS.gene92868:CDS |
| ACCTATTAATCTTTCAGTAT+CGG | 0.473250 | 3.4:+20596469 | None:intergenic |
| GCGGTATAAGGCAGAGGATG+AGG | 0.474792 | 3.4:-20595010 | MS.gene92868:CDS |
| CTTTGATCAAAACTTTACCT+TGG | 0.475667 | 3.4:+20595277 | None:intergenic |
| GCGATGACCAATCAAACGTT+TGG | 0.484985 | 3.4:+20596394 | None:intergenic |
| AGGAGAACATGCTAAGACTA+AGG | 0.487241 | 3.4:-20595247 | MS.gene92868:CDS |
| GAGGAAGCTTGAAAAGGTAG+TGG | 0.489230 | 3.4:-20594920 | MS.gene92868:CDS |
| GAAGGAGACAAGAAGATTGA+AGG | 0.489825 | 3.4:-20595423 | MS.gene92868:CDS |
| TGAGTTTGAATTCAAGAAGC+AGG | 0.491801 | 3.4:-20594851 | MS.gene92868:CDS |
| TGAATTCAAGAAGCAGGAGT+TGG | 0.497584 | 3.4:-20594845 | MS.gene92868:CDS |
| GATCCTCATCACATTAAAAC+CGG | 0.502743 | 3.4:+20596100 | None:intergenic |
| GAGAGTGAGGAAGCTTGAAA+AGG | 0.502774 | 3.4:-20594926 | MS.gene92868:CDS |
| GAATTATGTTTATGAAATGA+GGG | 0.504803 | 3.4:-20594950 | MS.gene92868:CDS |
| ATGGCTTGACAGAAACCAAT+TGG | 0.505887 | 3.4:-20594884 | MS.gene92868:CDS |
| CTGCTGAAGATAAGACAAAA+GGG | 0.507869 | 3.4:-20595113 | MS.gene92868:CDS |
| AATCAGTCCAACAAGACATA+AGG | 0.516258 | 3.4:-20596361 | MS.gene92868:CDS |
| AAGGGGTGACACGGTTCCCT+TGG | 0.517703 | 3.4:+20596507 | None:intergenic |
| TGTACCAAGGTCAATGCCTA+TGG | 0.520221 | 3.4:+20596586 | None:intergenic |
| CATGAATTTGTTATTGTCGG+AGG | 0.522698 | 3.4:-20595588 | MS.gene92868:CDS |
| TGTGAGTTGTTGAAGTAAGC+AGG | 0.526143 | 3.4:+20596155 | None:intergenic |
| TTGTAATTGACAACAATCAT+GGG | 0.527199 | 3.4:+20596299 | None:intergenic |
| CGGTGAAGGCAACGTAAGAA+GGG | 0.529846 | 3.4:+20596489 | None:intergenic |
| AGCTTGATTCACTATGTGAA+GGG | 0.532350 | 3.4:-20595734 | MS.gene92868:CDS |
| CAAAACTTTACCTTGGGCTG+TGG | 0.533300 | 3.4:+20595284 | None:intergenic |
| TAGTGGAGGAAAGTATAGAA+TGG | 0.539580 | 3.4:-20594903 | MS.gene92868:CDS |
| TCCTTCGTCAACAGTCACTA+AGG | 0.546693 | 3.4:+20595965 | None:intergenic |
| TGCCGAGCGGTATAAGGCAG+AGG | 0.550389 | 3.4:-20595016 | MS.gene92868:CDS |
| ACCTCAAGAGATATCTTCCA+TGG | 0.553297 | 3.4:-20596255 | MS.gene92868:CDS |
| ATGAATTTGTTATTGTCGGA+GGG | 0.553906 | 3.4:-20595587 | MS.gene92868:CDS |
| ATTTCATAGAAAGTACAAGA+AGG | 0.557642 | 3.4:-20595856 | MS.gene92868:CDS |
| ATCCTCTGCCTTATACCGCT+CGG | 0.563812 | 3.4:+20595014 | None:intergenic |
| GCAGCAATATTGAATACTGA+AGG | 0.571285 | 3.4:-20595441 | MS.gene92868:CDS |
| TTGGGAGATACTCATTTGGG+TGG | 0.571754 | 3.4:-20595921 | MS.gene92868:CDS |
| GAAGATTCAACAACTACTGA+AGG | 0.574421 | 3.4:-20595550 | MS.gene92868:CDS |
| GACAAGAAAATGTGGAGAGA+AGG | 0.578701 | 3.4:-20596038 | MS.gene92868:CDS |
| ATGATTGTTGTCAATTACAA+AGG | 0.584826 | 3.4:-20596296 | MS.gene92868:CDS |
| TAATCTTTCAGTATCGGTGA+AGG | 0.586135 | 3.4:+20596475 | None:intergenic |
| AGACAAGCTACAAAAGATGC+AGG | 0.588448 | 3.4:-20596131 | MS.gene92868:CDS |
| ATCATTATCACCAACAAGGA+GGG | 0.590966 | 3.4:-20595078 | MS.gene92868:CDS |
| AGAGATGAGAAGAATGATGA+GGG | 0.595789 | 3.4:-20595040 | MS.gene92868:CDS |
| GAAGCTTGAAAAGGTAGTGG+AGG | 0.595927 | 3.4:-20594917 | MS.gene92868:CDS |
| AAGGAAATGTTTAGTGTCAA+CGG | 0.596200 | 3.4:-20595531 | MS.gene92868:CDS |
| TGTGGAGAAGTGTTTGATTG+AGG | 0.604035 | 3.4:-20595634 | MS.gene92868:CDS |
| TACAGCTGTAGCTTGTACCA+AGG | 0.607846 | 3.4:+20596573 | None:intergenic |
| AGAATTCCAAAGCTTTGGGG+AGG | 0.611200 | 3.4:-20595818 | MS.gene92868:CDS |
| CATTAATCCTGATGAAGCTG+TGG | 0.613030 | 3.4:-20595484 | MS.gene92868:CDS |
| TAAGCAATAGCAGCTGCAGT+AGG | 0.618882 | 3.4:+20596068 | None:intergenic |
| GTGAGAATTCCAAAGCTTTG+GGG | 0.624343 | 3.4:-20595821 | MS.gene92868:CDS |
| AAGAGATGAGAAGAATGATG+AGG | 0.628540 | 3.4:-20595041 | MS.gene92868:CDS |
| CAACGTAAGAAGGGGTGACA+CGG | 0.629570 | 3.4:+20596498 | None:intergenic |
| AGATCATTCCAAACGACCAA+GGG | 0.630317 | 3.4:-20596523 | MS.gene92868:CDS |
| GAGATCATTCCAAACGACCA+AGG | 0.630381 | 3.4:-20596524 | MS.gene92868:CDS |
| ATGGTTTGGACAAGAAAATG+TGG | 0.630603 | 3.4:-20596046 | MS.gene92868:CDS |
| TTATCACCAACAAGGAGGGA+AGG | 0.634341 | 3.4:-20595074 | MS.gene92868:CDS |
| GAGCTTGATTCACTATGTGA+AGG | 0.634799 | 3.4:-20595735 | MS.gene92868:CDS |
| CAAATGAGTATCTCCCAAAG+TGG | 0.637746 | 3.4:+20595926 | None:intergenic |
| AAAGCCATAGGCATTGACCT+TGG | 0.638972 | 3.4:-20596590 | MS.gene92868:CDS |
| TCCTTAGTGACTGTTGACGA+AGG | 0.640013 | 3.4:-20595966 | MS.gene92868:CDS |
| ACCATGGAAGATATCTCTTG+AGG | 0.641800 | 3.4:+20596254 | None:intergenic |
| GTATAAGGCAGAGGATGAGG+AGG | 0.650304 | 3.4:-20595007 | MS.gene92868:CDS |
| CAGCATGCGAGAAAGCAAAG+AGG | 0.658762 | 3.4:-20595788 | MS.gene92868:CDS |
| GATCATTATCACCAACAAGG+AGG | 0.670278 | 3.4:-20595079 | MS.gene92868:CDS |
| GGTGAAGGCAACGTAAGAAG+GGG | 0.671684 | 3.4:+20596490 | None:intergenic |
| CTTTAATTTAGACAACACCA+TGG | 0.682894 | 3.4:+20596238 | None:intergenic |
| CAGAAAGTGCATGAAGACTG+TGG | 0.701540 | 3.4:-20595652 | MS.gene92868:CDS |
| CTTGGTGTTGAAACTAAAGG+TGG | 0.707841 | 3.4:-20595369 | MS.gene92868:CDS |
| GAATGATGAGGGATGCCGAG+CGG | 0.719182 | 3.4:-20595029 | MS.gene92868:CDS |
| GAAGATCATTATCACCAACA+AGG | 0.723817 | 3.4:-20595082 | MS.gene92868:CDS |
| GCTACAGCTGTATTGCAGTG+TGG | 0.732257 | 3.4:-20596562 | MS.gene92868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAACAAATATTGATATT+TGG | + | chr3.4:20596268-20596287 | None:intergenic | 15.0% |
| !! | AGAATTATGTTTATGAAATG+AGG | - | chr3.4:20596479-20596498 | MS.gene92868:CDS | 20.0% |
| !! | GAATTATGTTTATGAAATGA+GGG | - | chr3.4:20596480-20596499 | MS.gene92868:CDS | 20.0% |
| !! | TATGAAATAATTCAACAAGA+TGG | + | chr3.4:20595562-20595581 | None:intergenic | 20.0% |
| !!! | TGTTGATTTTGATAACAATT+TGG | - | chr3.4:20595532-20595551 | MS.gene92868:CDS | 20.0% |
| !!! | TTTTTTTGAGGAAATAAACA+AGG | - | chr3.4:20595748-20595767 | MS.gene92868:CDS | 20.0% |
| ! | ACCTATTAATCTTTCAGTAT+CGG | + | chr3.4:20594964-20594983 | None:intergenic | 25.0% |
| ! | ATGATTGTTGTCAATTACAA+AGG | - | chr3.4:20595134-20595153 | MS.gene92868:CDS | 25.0% |
| ! | CAATAACAAATTCATGAACT+TGG | + | chr3.4:20595838-20595857 | None:intergenic | 25.0% |
| ! | GAAATTGCTGAAACTTATTT+GGG | - | chr3.4:20595215-20595234 | MS.gene92868:CDS | 25.0% |
| ! | TTGTAATTGACAACAATCAT+GGG | + | chr3.4:20595134-20595153 | None:intergenic | 25.0% |
| ! | TTTGATCAAAACTTTACCTT+GGG | + | chr3.4:20596155-20596174 | None:intergenic | 25.0% |
| ! | TTTGTAATTGACAACAATCA+TGG | + | chr3.4:20595135-20595154 | None:intergenic | 25.0% |
| !! | ATTTCATAGAAAGTACAAGA+AGG | - | chr3.4:20595574-20595593 | MS.gene92868:CDS | 25.0% |
| !! | TGTTGATGTTAATGGAATTT+TGG | - | chr3.4:20596288-20596307 | MS.gene92868:CDS | 25.0% |
| !!! | AAAACATTCTCCTTTTTTGT+AGG | + | chr3.4:20596124-20596143 | None:intergenic | 25.0% |
| !!! | AAACATTCTCCTTTTTTGTA+GGG | + | chr3.4:20596123-20596142 | None:intergenic | 25.0% |
| !!! | GTTCATGAATTTGTTATTGT+CGG | - | chr3.4:20595839-20595858 | MS.gene92868:CDS | 25.0% |
| !!! | TGTTTTGATGTTGATGTTAA+TGG | - | chr3.4:20596280-20596299 | MS.gene92868:CDS | 25.0% |
| AAGGAAATGTTTAGTGTCAA+CGG | - | chr3.4:20595899-20595918 | MS.gene92868:CDS | 30.0% | |
| AATGTTCTTGTCTTTGATCT+TGG | - | chr3.4:20595422-20595441 | MS.gene92868:CDS | 30.0% | |
| ACCGATACTGAAAGATTAAT+AGG | - | chr3.4:20594960-20594979 | MS.gene92868:CDS | 30.0% | |
| CTTTGATCAAAACTTTACCT+TGG | + | chr3.4:20596156-20596175 | None:intergenic | 30.0% | |
| GGAAATTGCTGAAACTTATT+TGG | - | chr3.4:20595214-20595233 | MS.gene92868:CDS | 30.0% | |
| TTCAGTAGTTGTTGAATCTT+CGG | + | chr3.4:20595881-20595900 | None:intergenic | 30.0% | |
| ! | CTTTAATTTAGACAACACCA+TGG | + | chr3.4:20595195-20595214 | None:intergenic | 30.0% |
| ! | GAGGTGAAAAATGTTTTTCT+TGG | + | chr3.4:20595160-20595179 | None:intergenic | 30.0% |
| ! | TGATGTTAATGGAATTTTGG+AGG | - | chr3.4:20596291-20596310 | MS.gene92868:CDS | 30.0% |
| ! | TTGATATTTGGAACCTTTCT+AGG | + | chr3.4:20596256-20596275 | None:intergenic | 30.0% |
| !! | ATGAATTTGTTATTGTCGGA+GGG | - | chr3.4:20595843-20595862 | MS.gene92868:CDS | 30.0% |
| !! | CATGGTGTTGTCTAAATTAA+AGG | - | chr3.4:20595193-20595212 | MS.gene92868:CDS | 30.0% |
| !! | GTTTTGATCAAAGTCTATGA+AGG | - | chr3.4:20596163-20596182 | MS.gene92868:CDS | 30.0% |
| !! | TTTTGATTCCGAAGAATACT+AGG | - | chr3.4:20596095-20596114 | MS.gene92868:CDS | 30.0% |
| !!! | ATTTTTGGCTGATTGGTTTA+TGG | + | chr3.4:20594994-20595013 | None:intergenic | 30.0% |
| !!! | TGTTACTAGAGCTTTTTTTG+AGG | - | chr3.4:20595736-20595755 | MS.gene92868:CDS | 30.0% |
| AAAGATGCAGGAAAAATTGC+CGG | - | chr3.4:20595311-20595330 | MS.gene92868:CDS | 35.0% | |
| AAGAGATGAGAAGAATGATG+AGG | - | chr3.4:20596389-20596408 | MS.gene92868:CDS | 35.0% | |
| AATCAGTCCAACAAGACATA+AGG | - | chr3.4:20595069-20595088 | MS.gene92868:CDS | 35.0% | |
| ACAAGAAAAAGCAAAGCCAT+AGG | - | chr3.4:20594828-20594847 | MS.gene92868:CDS | 35.0% | |
| ACTCATCAATTTCTGCCAAT+TGG | + | chr3.4:20596564-20596583 | None:intergenic | 35.0% | |
| ACTGCTGAAGATAAGACAAA+AGG | - | chr3.4:20596316-20596335 | MS.gene92868:CDS | 35.0% | |
| AGAGATGAGAAGAATGATGA+GGG | - | chr3.4:20596390-20596409 | MS.gene92868:CDS | 35.0% | |
| AGCTTGATTCACTATGTGAA+GGG | - | chr3.4:20595696-20595715 | MS.gene92868:CDS | 35.0% | |
| AGTGAGAATTCCAAAGCTTT+GGG | - | chr3.4:20595608-20595627 | MS.gene92868:CDS | 35.0% | |
| ATCATTATCACCAACAAGGA+GGG | - | chr3.4:20596352-20596371 | MS.gene92868:CDS | 35.0% | |
| ATCATTCTTCTCATCTCTTG+AGG | + | chr3.4:20596388-20596407 | None:intergenic | 35.0% | |
| ATGCTCTTTAGTACCTAGAA+AGG | - | chr3.4:20596240-20596259 | MS.gene92868:CDS | 35.0% | |
| CAAACGTTTGGCATCAAAAA+CGG | + | chr3.4:20595027-20595046 | None:intergenic | 35.0% | |
| CTGCTGAAGATAAGACAAAA+GGG | - | chr3.4:20596317-20596336 | MS.gene92868:CDS | 35.0% | |
| GAAGATCATTATCACCAACA+AGG | - | chr3.4:20596348-20596367 | MS.gene92868:CDS | 35.0% | |
| GAAGATTCAACAACTACTGA+AGG | - | chr3.4:20595880-20595899 | MS.gene92868:CDS | 35.0% | |
| GATCCTCATCACATTAAAAC+CGG | + | chr3.4:20595333-20595352 | None:intergenic | 35.0% | |
| GCAGCAATATTGAATACTGA+AGG | - | chr3.4:20595989-20596008 | MS.gene92868:CDS | 35.0% | |
| GTTTCAACACCAAGACTAAA+AGG | + | chr3.4:20596055-20596074 | None:intergenic | 35.0% | |
| TACTAGGATCCCTACAAAAA+AGG | - | chr3.4:20596111-20596130 | MS.gene92868:CDS | 35.0% | |
| TGAGTTTGAATTCAAGAAGC+AGG | - | chr3.4:20596579-20596598 | MS.gene92868:CDS | 35.0% | |
| TTTGATGCCAAACGTTTGAT+TGG | - | chr3.4:20595029-20595048 | MS.gene92868:CDS | 35.0% | |
| ! | ACTAAGGACAACTTTTTGCT+TGG | - | chr3.4:20596199-20596218 | MS.gene92868:CDS | 35.0% |
| ! | ACTTTGGGAGATACTCATTT+GGG | - | chr3.4:20595506-20595525 | MS.gene92868:CDS | 35.0% |
| ! | ATGGTTTGGACAAGAAAATG+TGG | - | chr3.4:20595384-20595403 | MS.gene92868:CDS | 35.0% |
| ! | GATGTTATGCCTTTTAGTCT+TGG | - | chr3.4:20596043-20596062 | MS.gene92868:CDS | 35.0% |
| ! | TAGTGGAGGAAAGTATAGAA+TGG | - | chr3.4:20596527-20596546 | MS.gene92868:CDS | 35.0% |
| ! | TCAGGATTAATGCTTTTGCA+AGG | + | chr3.4:20595938-20595957 | None:intergenic | 35.0% |
| ! | TCCAACAAGACATAAGGTTT+TGG | - | chr3.4:20595075-20595094 | MS.gene92868:CDS | 35.0% |
| ! | TGGTTTGGAACAACCTTAAA+AGG | + | chr3.4:20595101-20595120 | None:intergenic | 35.0% |
| ! | TTATGTCTTGTTGGACTGAT+TGG | + | chr3.4:20595070-20595089 | None:intergenic | 35.0% |
| !! | AGTCTTGGTGTTGAAACTAA+AGG | - | chr3.4:20596058-20596077 | MS.gene92868:CDS | 35.0% |
| !! | CATAAGGTTTTGGCCTTTTA+AGG | - | chr3.4:20595085-20595104 | MS.gene92868:CDS | 35.0% |
| !! | CATGAATTTGTTATTGTCGG+AGG | - | chr3.4:20595842-20595861 | MS.gene92868:CDS | 35.0% |
| !! | TAATCTTTCAGTATCGGTGA+AGG | + | chr3.4:20594958-20594977 | None:intergenic | 35.0% |
| !!! | ATGGGTTTGTTTTTGTGGTT+TGG | + | chr3.4:20595116-20595135 | None:intergenic | 35.0% |
| !!! | CAATCATGGGTTTGTTTTTG+TGG | + | chr3.4:20595121-20595140 | None:intergenic | 35.0% |
| ACCATGGAAGATATCTCTTG+AGG | + | chr3.4:20595179-20595198 | None:intergenic | 40.0% | |
| ACCTCAAGAGATATCTTCCA+TGG | - | chr3.4:20595175-20595194 | MS.gene92868:CDS | 40.0% | |
| AGACAAGCTACAAAAGATGC+AGG | - | chr3.4:20595299-20595318 | MS.gene92868:CDS | 40.0% | |
| AGATCATTCCAAACGACCAA+GGG | - | chr3.4:20594907-20594926 | MS.gene92868:CDS | 40.0% | |
| AGCTGCTATTGCTTATGGTT+TGG | - | chr3.4:20595370-20595389 | MS.gene92868:CDS | 40.0% | |
| AGGAGAACATGCTAAGACTA+AGG | - | chr3.4:20596183-20596202 | MS.gene92868:CDS | 40.0% | |
| ATGGCTTGACAGAAACCAAT+TGG | - | chr3.4:20596546-20596565 | MS.gene92868:CDS | 40.0% | |
| CAAATGAGTATCTCCCAAAG+TGG | + | chr3.4:20595507-20595526 | None:intergenic | 40.0% | |
| CAGTGAGAATTCCAAAGCTT+TGG | - | chr3.4:20595607-20595626 | MS.gene92868:CDS | 40.0% | |
| CATTAATCCTGATGAAGCTG+TGG | - | chr3.4:20595946-20595965 | MS.gene92868:CDS | 40.0% | |
| GAAGGAGACAAGAAGATTGA+AGG | - | chr3.4:20596007-20596026 | MS.gene92868:CDS | 40.0% | |
| GACAAGAAAATGTGGAGAGA+AGG | - | chr3.4:20595392-20595411 | MS.gene92868:CDS | 40.0% | |
| GAGCTTGATTCACTATGTGA+AGG | - | chr3.4:20595695-20595714 | MS.gene92868:CDS | 40.0% | |
| GATCATTATCACCAACAAGG+AGG | - | chr3.4:20596351-20596370 | MS.gene92868:CDS | 40.0% | |
| GATTGAAGGCTTATTGCTGT+TGG | - | chr3.4:20596021-20596040 | MS.gene92868:CDS | 40.0% | |
| GCCAAAACCTTATGTCTTGT+TGG | + | chr3.4:20595079-20595098 | None:intergenic | 40.0% | |
| GTAGGGATCCTAGTATTCTT+CGG | + | chr3.4:20596106-20596125 | None:intergenic | 40.0% | |
| GTGAGAATTCCAAAGCTTTG+GGG | - | chr3.4:20595609-20595628 | MS.gene92868:CDS | 40.0% | |
| GTTCTTGTCTTTGATCTTGG+TGG | - | chr3.4:20595425-20595444 | MS.gene92868:CDS | 40.0% | |
| TGAATTCAAGAAGCAGGAGT+TGG | - | chr3.4:20596585-20596604 | MS.gene92868:CDS | 40.0% | |
| TGTGAGTTGTTGAAGTAAGC+AGG | + | chr3.4:20595278-20595297 | None:intergenic | 40.0% | |
| ! | CACTTTGGGAGATACTCATT+TGG | - | chr3.4:20595505-20595524 | MS.gene92868:CDS | 40.0% |
| !! | CTTGGTGTTGAAACTAAAGG+TGG | - | chr3.4:20596061-20596080 | MS.gene92868:CDS | 40.0% |
| !! | TGTGGAGAAGTGTTTGATTG+AGG | - | chr3.4:20595796-20595815 | MS.gene92868:CDS | 40.0% |
| !!! | AACGGTGTTGTGTGGATTTT+TGG | + | chr3.4:20595009-20595028 | None:intergenic | 40.0% |
| !!! | TGTGTGGATTTTTGGCTGAT+TGG | + | chr3.4:20595001-20595020 | None:intergenic | 40.0% |
| !!! | TTGCCGGTTTTAATGTGATG+AGG | - | chr3.4:20595327-20595346 | MS.gene92868:CDS | 40.0% |
| ACTGCAGCTGCTATTGCTTA+TGG | - | chr3.4:20595365-20595384 | MS.gene92868:CDS | 45.0% | |
| ATGAAATGAGGGAGAGAGTG+AGG | - | chr3.4:20596491-20596510 | MS.gene92868:CDS | 45.0% | |
| CAAAACTTTACCTTGGGCTG+TGG | + | chr3.4:20596149-20596168 | None:intergenic | 45.0% | |
| CGAAGGAATGTTCCAGGTTA+AGG | - | chr3.4:20595481-20595500 | MS.gene92868:CDS | 45.0% | |
| CTTGTCTTTGATCTTGGTGG+TGG | - | chr3.4:20595428-20595447 | MS.gene92868:CDS | 45.0% | |
| GAGAGTGAGGAAGCTTGAAA+AGG | - | chr3.4:20596504-20596523 | MS.gene92868:CDS | 45.0% | |
| GAGATCATTCCAAACGACCA+AGG | - | chr3.4:20594906-20594925 | MS.gene92868:CDS | 45.0% | |
| GAGGAAGCTTGAAAAGGTAG+TGG | - | chr3.4:20596510-20596529 | MS.gene92868:CDS | 45.0% | |
| GCGATGACCAATCAAACGTT+TGG | + | chr3.4:20595039-20595058 | None:intergenic | 45.0% | |
| TAAGCAATAGCAGCTGCAGT+AGG | + | chr3.4:20595365-20595384 | None:intergenic | 45.0% | |
| TCCTTAGTGACTGTTGACGA+AGG | - | chr3.4:20595464-20595483 | MS.gene92868:CDS | 45.0% | |
| TCCTTCGTCAACAGTCACTA+AGG | + | chr3.4:20595468-20595487 | None:intergenic | 45.0% | |
| TCTTAACCTCCCCAAAGCTT+TGG | + | chr3.4:20595621-20595640 | None:intergenic | 45.0% | |
| TGTACCAAGGTCAATGCCTA+TGG | + | chr3.4:20594847-20594866 | None:intergenic | 45.0% | |
| TGTTGACGAAGGAATGTTCC+AGG | - | chr3.4:20595475-20595494 | MS.gene92868:CDS | 45.0% | |
| TTATCACCAACAAGGAGGGA+AGG | - | chr3.4:20596356-20596375 | MS.gene92868:CDS | 45.0% | |
| TTGGGAGATACTCATTTGGG+TGG | - | chr3.4:20595509-20595528 | MS.gene92868:CDS | 45.0% | |
| ! | AATGTTTTCTCCACAGCCCA+AGG | - | chr3.4:20596136-20596155 | MS.gene92868:CDS | 45.0% |
| ! | CAGAAAGTGCATGAAGACTG+TGG | - | chr3.4:20595778-20595797 | MS.gene92868:CDS | 45.0% |
| ! | GAAGCTTGAAAAGGTAGTGG+AGG | - | chr3.4:20596513-20596532 | MS.gene92868:CDS | 45.0% |
| ! | TACAGCTGTAGCTTGTACCA+AGG | + | chr3.4:20594860-20594879 | None:intergenic | 45.0% |
| ! | TTCCAGGTTAAGGCCACTTT+GGG | - | chr3.4:20595491-20595510 | MS.gene92868:CDS | 45.0% |
| !! | AAAGCCATAGGCATTGACCT+TGG | - | chr3.4:20594840-20594859 | MS.gene92868:CDS | 45.0% |
| !! | AGAATTCCAAAGCTTTGGGG+AGG | - | chr3.4:20595612-20595631 | MS.gene92868:CDS | 45.0% |
| !! | GCATCAAAAACGGTGTTGTG+TGG | + | chr3.4:20595017-20595036 | None:intergenic | 45.0% |
| ACTCAACCTTCCCTCCTTGT+TGG | + | chr3.4:20596365-20596384 | None:intergenic | 50.0% | |
| ATCCTCTGCCTTATACCGCT+CGG | + | chr3.4:20596419-20596438 | None:intergenic | 50.0% | |
| CAACGTAAGAAGGGGTGACA+CGG | + | chr3.4:20594935-20594954 | None:intergenic | 50.0% | |
| CAGCATGCGAGAAAGCAAAG+AGG | - | chr3.4:20595642-20595661 | MS.gene92868:CDS | 50.0% | |
| CCATAAGCCACAGCTTCATC+AGG | + | chr3.4:20595956-20595975 | None:intergenic | 50.0% | |
| CCTGATGAAGCTGTGGCTTA+TGG | - | chr3.4:20595953-20595972 | MS.gene92868:CDS | 50.0% | |
| CGGTGAAGGCAACGTAAGAA+GGG | + | chr3.4:20594944-20594963 | None:intergenic | 50.0% | |
| GCTACAGCTGTATTGCAGTG+TGG | - | chr3.4:20594868-20594887 | MS.gene92868:CDS | 50.0% | |
| GGATGAGGAGGTTAGGAAGA+AGG | - | chr3.4:20596435-20596454 | MS.gene92868:CDS | 50.0% | |
| GGTGAAGGCAACGTAAGAAG+GGG | + | chr3.4:20594943-20594962 | None:intergenic | 50.0% | |
| GTATAAGGCAGAGGATGAGG+AGG | - | chr3.4:20596423-20596442 | MS.gene92868:CDS | 50.0% | |
| GTTCCAGGTTAAGGCCACTT+TGG | - | chr3.4:20595490-20595509 | MS.gene92868:CDS | 50.0% | |
| TCGGTGAAGGCAACGTAAGA+AGG | + | chr3.4:20594945-20594964 | None:intergenic | 50.0% | |
| ACACGGTTCCCTTGGTCGTT+TGG | + | chr3.4:20594918-20594937 | None:intergenic | 55.0% | |
| AGGCAGAGGATGAGGAGGTT+AGG | - | chr3.4:20596428-20596447 | MS.gene92868:CDS | 55.0% | |
| GAATGATGAGGGATGCCGAG+CGG | - | chr3.4:20596401-20596420 | MS.gene92868:CDS | 55.0% | |
| GCGGTATAAGGCAGAGGATG+AGG | - | chr3.4:20596420-20596439 | MS.gene92868:CDS | 55.0% | |
| ! | CTCCCAAAGTGGCCTTAACC+TGG | + | chr3.4:20595496-20595515 | None:intergenic | 55.0% |
| AAGGGGTGACACGGTTCCCT+TGG | + | chr3.4:20594926-20594945 | None:intergenic | 60.0% | |
| GAGGGATGCCGAGCGGTATA+AGG | - | chr3.4:20596408-20596427 | MS.gene92868:CDS | 60.0% | |
| TGCCGAGCGGTATAAGGCAG+AGG | - | chr3.4:20596414-20596433 | MS.gene92868:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 20594822 | 20596630 | 20594822 | ID=MS.gene92868 |
| chr3.4 | mRNA | 20594822 | 20596630 | 20594822 | ID=MS.gene92868.t1;Parent=MS.gene92868 |
| chr3.4 | exon | 20594822 | 20596630 | 20594822 | ID=MS.gene92868.t1.exon1;Parent=MS.gene92868.t1 |
| chr3.4 | CDS | 20594822 | 20596630 | 20594822 | ID=cds.MS.gene92868.t1;Parent=MS.gene92868.t1 |
| Gene Sequence |
| Protein sequence |
