Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93077.t1 | XP_013446199.1 | 98.8 | 781 | 7 | 1 | 1 | 779 | 1 | 781 | 0.00E+00 | 1531.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93077.t1 | Q93ZF5 | 67.7 | 792 | 234 | 10 | 1 | 778 | 1 | 784 | 3.9e-299 | 1028.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93077.t1 | A0A072TSP3 | 98.8 | 781 | 7 | 1 | 1 | 779 | 1 | 781 | 0.0e+00 | 1531.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056473 | MS.gene93077 | 0.882463 | 1.02E-70 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93077.t1 | MTR_8g069955 | 98.848 | 781 | 7 | 1 | 1 | 779 | 1 | 781 | 0.0 | 1603 |
MS.gene93077.t1 | MTR_8g069955 | 98.802 | 751 | 7 | 1 | 1 | 749 | 1 | 751 | 0.0 | 1539 |
MS.gene93077.t1 | MTR_8g069955 | 98.725 | 706 | 7 | 1 | 1 | 704 | 1 | 706 | 0.0 | 1449 |
MS.gene93077.t1 | MTR_1g075640 | 47.408 | 791 | 382 | 11 | 1 | 777 | 1 | 771 | 0.0 | 726 |
MS.gene93077.t1 | MTR_1g041695 | 46.203 | 790 | 394 | 8 | 1 | 777 | 1 | 772 | 0.0 | 696 |
MS.gene93077.t1 | MTR_7g011350 | 34.950 | 804 | 469 | 18 | 2 | 779 | 1 | 776 | 1.45e-146 | 449 |
MS.gene93077.t1 | MTR_2g045780 | 35.194 | 824 | 459 | 24 | 2 | 779 | 1 | 795 | 2.20e-146 | 449 |
MS.gene93077.t1 | MTR_5g042150 | 33.668 | 796 | 478 | 16 | 4 | 777 | 3 | 770 | 6.88e-146 | 447 |
MS.gene93077.t1 | MTR_7g011330 | 35.916 | 813 | 449 | 22 | 2 | 779 | 1 | 776 | 1.26e-144 | 444 |
MS.gene93077.t1 | MTR_7g011330 | 36.084 | 812 | 452 | 22 | 2 | 779 | 1 | 779 | 2.87e-144 | 443 |
MS.gene93077.t1 | MTR_2g045780 | 33.423 | 745 | 427 | 21 | 2 | 704 | 1 | 718 | 1.64e-115 | 366 |
MS.gene93077.t1 | MTR_7g011280 | 41.000 | 400 | 226 | 7 | 387 | 779 | 30 | 426 | 1.50e-96 | 307 |
MS.gene93077.t1 | MTR_6g034015 | 45.251 | 179 | 74 | 5 | 623 | 779 | 2 | 178 | 5.16e-42 | 151 |
MS.gene93077.t1 | MTR_7g011310 | 32.010 | 403 | 229 | 13 | 2 | 385 | 1 | 377 | 1.26e-38 | 148 |
MS.gene93077.t1 | MTR_2g088870 | 30.060 | 336 | 214 | 11 | 430 | 753 | 111 | 437 | 1.24e-24 | 108 |
MS.gene93077.t1 | MTR_2g088870 | 30.060 | 336 | 212 | 12 | 430 | 753 | 111 | 435 | 3.70e-23 | 103 |
MS.gene93077.t1 | MTR_7g076560 | 28.955 | 335 | 219 | 12 | 430 | 753 | 76 | 402 | 1.74e-20 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93077.t1 | AT1G68740 | 67.970 | 793 | 231 | 11 | 1 | 779 | 1 | 784 | 0.0 | 1050 |
MS.gene93077.t1 | AT1G68740 | 65.877 | 718 | 223 | 10 | 1 | 704 | 1 | 710 | 0.0 | 918 |
MS.gene93077.t1 | AT3G23430 | 45.828 | 803 | 375 | 13 | 1 | 771 | 1 | 775 | 0.0 | 704 |
MS.gene93077.t1 | AT1G26730 | 37.883 | 784 | 443 | 15 | 2 | 778 | 1 | 747 | 1.15e-152 | 464 |
MS.gene93077.t1 | AT3G29060 | 34.870 | 846 | 426 | 16 | 2 | 774 | 1 | 794 | 3.31e-151 | 461 |
MS.gene93077.t1 | AT1G35350 | 36.822 | 793 | 440 | 20 | 2 | 778 | 1 | 748 | 1.53e-149 | 456 |
MS.gene93077.t1 | AT1G14040 | 35.119 | 840 | 452 | 20 | 2 | 778 | 1 | 810 | 4.42e-147 | 451 |
MS.gene93077.t1 | AT4G25350 | 35.279 | 788 | 452 | 11 | 2 | 778 | 1 | 741 | 7.09e-146 | 446 |
MS.gene93077.t1 | AT1G69480 | 34.457 | 801 | 460 | 17 | 2 | 772 | 1 | 766 | 2.82e-140 | 432 |
MS.gene93077.t1 | AT1G69480 | 34.457 | 801 | 460 | 17 | 2 | 772 | 1 | 766 | 2.82e-140 | 432 |
MS.gene93077.t1 | AT2G03260 | 33.613 | 833 | 468 | 17 | 2 | 778 | 1 | 804 | 4.44e-136 | 422 |
MS.gene93077.t1 | AT2G03240 | 33.373 | 836 | 482 | 20 | 2 | 778 | 1 | 820 | 1.37e-130 | 409 |
MS.gene93077.t1 | AT1G35350 | 41.715 | 513 | 293 | 6 | 269 | 778 | 55 | 564 | 3.13e-128 | 394 |
MS.gene93077.t1 | AT2G03260 | 37.171 | 608 | 347 | 10 | 189 | 778 | 1 | 591 | 8.38e-126 | 389 |
MS.gene93077.t1 | AT1G26730 | 35.196 | 716 | 420 | 15 | 2 | 710 | 1 | 679 | 8.70e-118 | 371 |
MS.gene93077.t1 | AT2G03250 | 33.108 | 740 | 420 | 19 | 2 | 713 | 1 | 693 | 1.19e-104 | 337 |
MS.gene93077.t1 | AT2G03250 | 31.646 | 632 | 362 | 17 | 2 | 610 | 1 | 585 | 5.69e-75 | 254 |
MS.gene93077.t1 | AT2G32295 | 28.493 | 365 | 236 | 16 | 430 | 779 | 98 | 452 | 5.00e-25 | 109 |
MS.gene93077.t1 | AT2G32295 | 28.493 | 365 | 236 | 16 | 430 | 779 | 98 | 452 | 5.00e-25 | 109 |
MS.gene93077.t1 | AT5G35730 | 28.729 | 362 | 229 | 12 | 430 | 779 | 102 | 446 | 2.13e-23 | 104 |
Find 138 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACTCATTTGATGATTATT+TGG | 0.164431 | 8.2:-32935037 | None:intergenic |
TGTCCTTTCTGCCATATTAT+TGG | 0.182093 | 8.2:+32941581 | MS.gene93077:CDS |
ACAAAAGCTTCTTTCCATTC+TGG | 0.212257 | 8.2:-32934950 | None:intergenic |
GCTAAGGAGCCTAGAGTTTA+TGG | 0.215307 | 8.2:+32941471 | MS.gene93077:CDS |
TATTAACCTTATTGAGGTTT+TGG | 0.228739 | 8.2:-32935375 | None:intergenic |
TTTCTACATTTCTTCCTCTA+TGG | 0.229554 | 8.2:+32940716 | MS.gene93077:CDS |
GACTATTTACTGGATGCTTT+TGG | 0.234826 | 8.2:+32940448 | MS.gene93077:CDS |
TTCCTTGCCCACTAAGAAAA+TGG | 0.237152 | 8.2:-32936896 | None:intergenic |
TTTCCATGTAGACTGAATTT+TGG | 0.245627 | 8.2:-32940527 | None:intergenic |
AAAATAAAGTTTACTTGAAT+TGG | 0.251298 | 8.2:-32935124 | None:intergenic |
AATTTGGTCACCTCTTTATA+AGG | 0.256825 | 8.2:+32941170 | MS.gene93077:CDS |
GCACAAGTTCAATTCCTTCT+TGG | 0.261445 | 8.2:+32940914 | MS.gene93077:CDS |
GAGAAAGAGTTTCTTGATAG+AGG | 0.262919 | 8.2:+32935415 | MS.gene93077:CDS |
ATGGCATGTTACTATATAAC+TGG | 0.266181 | 8.2:+32941490 | MS.gene93077:CDS |
TGGTTTCATTGAGCTTTATA+AGG | 0.272211 | 8.2:+32937091 | MS.gene93077:CDS |
TTGGGACTTTGTAAGGGATT+GGG | 0.277186 | 8.2:+32941894 | MS.gene93077:CDS |
ATAAATTCAGGACTATTTAC+TGG | 0.286750 | 8.2:+32940438 | MS.gene93077:intron |
ATTTCTTAACCAAGGATTCT+TGG | 0.294130 | 8.2:-32941935 | None:intergenic |
GTGTGATAAGGAACATAATT+TGG | 0.298051 | 8.2:+32941154 | MS.gene93077:CDS |
CATGCAATTACTTTCTTCAT+TGG | 0.303322 | 8.2:+32938322 | MS.gene93077:CDS |
AATTGTATTGGGACTTTGTA+AGG | 0.308439 | 8.2:+32941887 | MS.gene93077:CDS |
CAGAGAACAAACAGAGGATT+TGG | 0.309805 | 8.2:+32936782 | MS.gene93077:CDS |
AACTTTCTTAGTGATGAAAA+AGG | 0.319449 | 8.2:-32935073 | None:intergenic |
ACACGAAGCACACCACCTTC+TGG | 0.324304 | 8.2:-32937026 | None:intergenic |
TGAGCTCAAATCTGCATTCA+TGG | 0.325797 | 8.2:+32935471 | MS.gene93077:CDS |
TAGGATATTTGAATGATTAT+AGG | 0.326678 | 8.2:+32937117 | MS.gene93077:CDS |
AACTTTGTACCAATTGTATT+GGG | 0.326926 | 8.2:+32941876 | MS.gene93077:CDS |
TGCATTGCTCTCCAATAATA+TGG | 0.328656 | 8.2:-32941592 | None:intergenic |
CAACTTTGTACCAATTGTAT+TGG | 0.332482 | 8.2:+32941875 | MS.gene93077:CDS |
AGTTTACTTGAATTGGTTCA+TGG | 0.347483 | 8.2:-32935117 | None:intergenic |
TTTAGACCAAAACCTCAATA+AGG | 0.348820 | 8.2:+32935369 | MS.gene93077:CDS |
TGGGACTTTGTAAGGGATTG+GGG | 0.360028 | 8.2:+32941895 | MS.gene93077:CDS |
TCAACTACTTTGAGATAGAT+TGG | 0.368425 | 8.2:-32937589 | None:intergenic |
ATAAATCAATGGATTTGAAA+TGG | 0.376768 | 8.2:+32936844 | MS.gene93077:CDS |
TTCTCCCTAGGTTCTTATGC+TGG | 0.380374 | 8.2:+32941292 | MS.gene93077:intron |
AGAAATTAGTTACCTTGTAA+TGG | 0.385123 | 8.2:+32936968 | MS.gene93077:CDS |
ACCACTTCCTTTGTGTGATA+AGG | 0.390771 | 8.2:+32941142 | MS.gene93077:CDS |
TAGCATCAGTGTCAGCAAAT+TGG | 0.391037 | 8.2:-32935327 | None:intergenic |
AAGTTATTAGAAGAGGACTA+TGG | 0.394611 | 8.2:+32942538 | MS.gene93077:CDS |
ATTGGGACTTTGTAAGGGAT+TGG | 0.402051 | 8.2:+32941893 | MS.gene93077:CDS |
CATTTGACTCTACTCACAAA+AGG | 0.402742 | 8.2:+32940881 | MS.gene93077:CDS |
AGAAAGAGTTTCTTGATAGA+GGG | 0.409944 | 8.2:+32935416 | MS.gene93077:CDS |
TTTATCCTCTTCATTTGATT+CGG | 0.410402 | 8.2:-32936826 | None:intergenic |
TAAATCAATGGATTTGAAAT+GGG | 0.413347 | 8.2:+32936845 | MS.gene93077:CDS |
AAGGTAACTAATTTCTGAAA+AGG | 0.416741 | 8.2:-32936961 | None:intergenic |
TCATCCACATTCTCTATTAA+CGG | 0.416803 | 8.2:+32935547 | MS.gene93077:CDS |
TCATCCTCCACTTCATGAAA+AGG | 0.425572 | 8.2:-32942746 | None:intergenic |
ATTGAGCTTTATAAGGGCCT+AGG | 0.431124 | 8.2:+32937098 | MS.gene93077:CDS |
ACAAGTCACCTTATCAATCT+AGG | 0.432374 | 8.2:+32941751 | MS.gene93077:CDS |
ACATTACTCTGAGGCTTGCT+TGG | 0.433030 | 8.2:+32942442 | MS.gene93077:CDS |
AGCTATAAGACTCAAGACTA+TGG | 0.433500 | 8.2:+32941514 | MS.gene93077:CDS |
ATTACAGGTGGTGAAGTTCA+TGG | 0.433820 | 8.2:+32938204 | MS.gene93077:intron |
GGTTTCATTGAGCTTTATAA+GGG | 0.440025 | 8.2:+32937092 | MS.gene93077:CDS |
ATAAGGTTAATAAATTCTAT+AGG | 0.440648 | 8.2:+32935386 | MS.gene93077:CDS |
GAAATTCTCTAAGCAATTTG+AGG | 0.442628 | 8.2:+32934916 | MS.gene93077:CDS |
CATATTTGCCTAGATTGATA+AGG | 0.449824 | 8.2:-32941759 | None:intergenic |
GGCTGATCAACTTTGCAGTC+AGG | 0.450379 | 8.2:+32941325 | MS.gene93077:CDS |
TTACAAAGTCCCAATACAAT+TGG | 0.458613 | 8.2:-32941885 | None:intergenic |
TGATTATTGGCAACTTAAGA+AGG | 0.460532 | 8.2:+32934973 | MS.gene93077:CDS |
GAAAGAGTTTCTTGATAGAG+GGG | 0.460793 | 8.2:+32935417 | MS.gene93077:CDS |
TTCATGGATAAGAAAGGTAA+AGG | 0.465006 | 8.2:+32935487 | MS.gene93077:CDS |
CTTGTTTCATCAACTAGTAA+AGG | 0.467786 | 8.2:+32935277 | MS.gene93077:CDS |
AGAATTTATTAACCTTATTG+AGG | 0.469370 | 8.2:-32935381 | None:intergenic |
AAAGGAACTCCAAGAATCCT+TGG | 0.469620 | 8.2:+32941926 | MS.gene93077:CDS |
TTTCGAGATAGTTCCAACTA+AGG | 0.469743 | 8.2:+32940787 | MS.gene93077:CDS |
ATGCAGAGGAAGACTCTGTT+AGG | 0.473028 | 8.2:+32936757 | MS.gene93077:intron |
ACCGGTATATAATGTTGAAC+GGG | 0.474302 | 8.2:-32941110 | None:intergenic |
CTGTACTTTAGTTCCTTAGT+TGG | 0.482476 | 8.2:-32940800 | None:intergenic |
TGAGACAGATTCCTCCTCCT+TGG | 0.484421 | 8.2:-32935527 | None:intergenic |
CTTTAAAGGTTCCAATGCTA+AGG | 0.487227 | 8.2:+32941455 | MS.gene93077:intron |
ATTTCTAGTGTGCAAGGAGA+TGG | 0.490178 | 8.2:+32941713 | MS.gene93077:intron |
AACTCTAGGCTCCTTAGCAT+TGG | 0.493715 | 8.2:-32941466 | None:intergenic |
GGAAGTGGTATCGGCTTGAC+CGG | 0.496093 | 8.2:-32941128 | None:intergenic |
GGTAAATTGAGGACATTATC+CGG | 0.496131 | 8.2:+32936873 | MS.gene93077:CDS |
ATATTATTGGAGAGCAATGC+AGG | 0.496213 | 8.2:+32941594 | MS.gene93077:CDS |
AGCTATTTACTACTTGTCAA+TGG | 0.497208 | 8.2:+32941978 | MS.gene93077:CDS |
TATAATCATTCAAATATCCT+AGG | 0.503873 | 8.2:-32937115 | None:intergenic |
GTTTCAGCTATGTTAGCTGC+AGG | 0.508558 | 8.2:+32941781 | MS.gene93077:CDS |
ATCAATTCATTTCTTAACCA+AGG | 0.508898 | 8.2:-32941943 | None:intergenic |
TCATGGATAAGAAAGGTAAA+GGG | 0.512773 | 8.2:+32935488 | MS.gene93077:CDS |
ATTTGACTCTACTCACAAAA+GGG | 0.513008 | 8.2:+32940882 | MS.gene93077:CDS |
GAGGACTATGGAATTTCTAC+AGG | 0.514396 | 8.2:+32942550 | MS.gene93077:CDS |
GCACTTGAAGTTATTAGAAG+AGG | 0.514485 | 8.2:+32942531 | MS.gene93077:CDS |
TGAACAAATCTTCCATTACA+AGG | 0.514803 | 8.2:-32936980 | None:intergenic |
CATGAGCATCTAAATAATGC+TGG | 0.518926 | 8.2:+32942692 | MS.gene93077:CDS |
GTTTGAGAAGGTGTTGTCAA+AGG | 0.521767 | 8.2:-32936939 | None:intergenic |
GGGATTGGGGTTTGTTACAA+AGG | 0.525459 | 8.2:+32941908 | MS.gene93077:CDS |
ATGGATTTGAAATGGGAAGA+TGG | 0.530453 | 8.2:+32936852 | MS.gene93077:CDS |
AAATTCTCTAAGCAATTTGA+GGG | 0.530514 | 8.2:+32934917 | MS.gene93077:CDS |
AAGGAGATGGTTTGATGAAG+GGG | 0.532761 | 8.2:+32941726 | MS.gene93077:CDS |
TGCTAAAGGAGATCATAGAA+AGG | 0.536929 | 8.2:+32938258 | MS.gene93077:CDS |
AAATGAAGAGGATAAATCAA+TGG | 0.537080 | 8.2:+32936833 | MS.gene93077:CDS |
ACACCAAAATTCAGTCTACA+TGG | 0.537834 | 8.2:+32940524 | MS.gene93077:CDS |
AATTTGATTTCTAGTGTGCA+AGG | 0.539390 | 8.2:+32941707 | MS.gene93077:intron |
ATTACCGTTAATAGAGAATG+TGG | 0.545235 | 8.2:-32935551 | None:intergenic |
AGGGACAACTCATTCCAGAA+TGG | 0.545665 | 8.2:+32934936 | MS.gene93077:CDS |
ATTTCTGAAAAGGTTTGAGA+AGG | 0.545715 | 8.2:-32936951 | None:intergenic |
GAATCTTTATAAATGCAAGC+AGG | 0.546938 | 8.2:-32937427 | None:intergenic |
CAATAATGTTGCAGCCATAG+AGG | 0.547217 | 8.2:-32940730 | None:intergenic |
TTCTCACTATTCCAAGGAGG+AGG | 0.553993 | 8.2:+32935516 | MS.gene93077:CDS |
AGTAACATGCCATAAACTCT+AGG | 0.555517 | 8.2:-32941480 | None:intergenic |
TCTGCATTCATGGATAAGAA+AGG | 0.557752 | 8.2:+32935481 | MS.gene93077:CDS |
TCACACAAAGGAAGTGGTAT+CGG | 0.558786 | 8.2:-32941137 | None:intergenic |
ATTGTATTGGGACTTTGTAA+GGG | 0.559765 | 8.2:+32941888 | MS.gene93077:CDS |
GCCCGTTCAACATTATATAC+CGG | 0.560241 | 8.2:+32941109 | MS.gene93077:CDS |
GCAAGGAGATGGTTTGATGA+AGG | 0.560927 | 8.2:+32941724 | MS.gene93077:CDS |
TTGCCCACTAAGAAAATGGC+CGG | 0.564116 | 8.2:-32936892 | None:intergenic |
TGGCAAGTTTAGAGCAGTGA+AGG | 0.564530 | 8.2:+32942712 | MS.gene93077:CDS |
TCCTTATCACACAAAGGAAG+TGG | 0.565272 | 8.2:-32941143 | None:intergenic |
AAACTGTCTACCCTGTGCTT+AGG | 0.566067 | 8.2:+32940547 | MS.gene93077:CDS |
TCCACTTCATGAAAAGGAAG+TGG | 0.569024 | 8.2:-32942740 | None:intergenic |
GACCGGTATATAATGTTGAA+CGG | 0.570809 | 8.2:-32941111 | None:intergenic |
CATGCAGAAAAGATGATCAA+AGG | 0.585159 | 8.2:+32937068 | MS.gene93077:CDS |
TACAATGTCTATGACTGCTG+TGG | 0.588387 | 8.2:+32940841 | MS.gene93077:CDS |
CAAGGAGATGGTTTGATGAA+GGG | 0.590192 | 8.2:+32941725 | MS.gene93077:CDS |
TCTCCAATAATATGGCAGAA+AGG | 0.590845 | 8.2:-32941584 | None:intergenic |
GCATACAAGTAATAGTAAGA+AGG | 0.594475 | 8.2:-32941088 | None:intergenic |
AATGGGAAGATGGTAAATTG+AGG | 0.594587 | 8.2:+32936862 | MS.gene93077:CDS |
AAGGAATTGAACTTGTGCAT+AGG | 0.598938 | 8.2:-32940909 | None:intergenic |
ATGTCTATGACTGCTGTGGT+TGG | 0.604592 | 8.2:+32940845 | MS.gene93077:CDS |
TGGCATGTTACTATATAACT+GGG | 0.604737 | 8.2:+32941491 | MS.gene93077:CDS |
ATGGCTGCAACATTATTGCA+TGG | 0.604892 | 8.2:+32940735 | MS.gene93077:CDS |
GAACTCTTCTCACTATTCCA+AGG | 0.613505 | 8.2:+32935510 | MS.gene93077:CDS |
GGTGAAGTTCATGGACGAAG+TGG | 0.623365 | 8.2:+32938213 | MS.gene93077:CDS |
GAAGTTCATGGACGAAGTGG+AGG | 0.627533 | 8.2:+32938216 | MS.gene93077:CDS |
TGCTTCGTGTTAATAAAACA+AGG | 0.630774 | 8.2:+32937039 | MS.gene93077:CDS |
TAATCATCAAATGAGTTCAG+TGG | 0.642708 | 8.2:+32935042 | MS.gene93077:CDS |
TCAAGAAAATGCAATCCAGA+AGG | 0.642722 | 8.2:+32937011 | MS.gene93077:CDS |
AGAAAATGCAATCCAGAAGG+TGG | 0.643834 | 8.2:+32937014 | MS.gene93077:CDS |
TAATAAATTCTATAGGACAA+AGG | 0.644773 | 8.2:+32935393 | MS.gene93077:CDS |
GTGGGCAAGGAAAGAATGTG+AGG | 0.650577 | 8.2:+32936907 | MS.gene93077:CDS |
GCAGAAAAGATGATCAAAGG+TGG | 0.655712 | 8.2:+32937071 | MS.gene93077:CDS |
TTATGTTCCTTATCACACAA+AGG | 0.659762 | 8.2:-32941149 | None:intergenic |
GATTCTGAAGAAATTTGACA+AGG | 0.671965 | 8.2:+32937445 | MS.gene93077:CDS |
AGGTATTAAACATTACTCTG+AGG | 0.690644 | 8.2:+32942433 | MS.gene93077:intron |
CTCTTCTCACTATTCCAAGG+AGG | 0.702664 | 8.2:+32935513 | MS.gene93077:CDS |
ATATTTCAACAACTCAGACA+AGG | 0.704761 | 8.2:+32937618 | MS.gene93077:CDS |
TAGGAGCAGAGAACAAACAG+AGG | 0.705511 | 8.2:+32936776 | MS.gene93077:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 32934911 | 32942778 | 32934911 | ID=MS.gene93077 |
chr8.2 | mRNA | 32934911 | 32942778 | 32934911 | ID=MS.gene93077.t1;Parent=MS.gene93077 |
chr8.2 | exon | 32934911 | 32935132 | 32934911 | ID=MS.gene93077.t1.exon1;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32934911 | 32935132 | 32934911 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32935265 | 32935568 | 32935265 | ID=MS.gene93077.t1.exon2;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32935265 | 32935568 | 32935265 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32936763 | 32937138 | 32936763 | ID=MS.gene93077.t1.exon3;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32936763 | 32937138 | 32936763 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32937418 | 32937466 | 32937418 | ID=MS.gene93077.t1.exon4;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32937418 | 32937466 | 32937418 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32937568 | 32937639 | 32937568 | ID=MS.gene93077.t1.exon5;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32937568 | 32937639 | 32937568 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32938211 | 32938343 | 32938211 | ID=MS.gene93077.t1.exon6;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32938211 | 32938343 | 32938211 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32940448 | 32940568 | 32940448 | ID=MS.gene93077.t1.exon7;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32940448 | 32940568 | 32940448 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32940700 | 32940949 | 32940700 | ID=MS.gene93077.t1.exon8;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32940700 | 32940949 | 32940700 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32941087 | 32941191 | 32941087 | ID=MS.gene93077.t1.exon9;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32941087 | 32941191 | 32941087 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32941302 | 32941346 | 32941302 | ID=MS.gene93077.t1.exon10;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32941302 | 32941346 | 32941302 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32941463 | 32941615 | 32941463 | ID=MS.gene93077.t1.exon11;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32941463 | 32941615 | 32941463 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32941721 | 32941999 | 32941721 | ID=MS.gene93077.t1.exon12;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32941721 | 32941999 | 32941721 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32942435 | 32942571 | 32942435 | ID=MS.gene93077.t1.exon13;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32942435 | 32942571 | 32942435 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
chr8.2 | exon | 32942685 | 32942778 | 32942685 | ID=MS.gene93077.t1.exon14;Parent=MS.gene93077.t1 |
chr8.2 | CDS | 32942685 | 32942778 | 32942685 | ID=cds.MS.gene93077.t1;Parent=MS.gene93077.t1 |
Gene Sequence |
Protein sequence |