Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93093.t1 | XP_013447041.1 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.00E+00 | 1085.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93093.t1 | O66601 | 53.2 | 524 | 226 | 8 | 13 | 536 | 6 | 510 | 1.3e-152 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93093.t1 | A0A072TW15 | 98.9 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0e+00 | 1085.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93093 | MS.gene064542 | PPI |
| MS.gene93093 | MS.gene36640 | PPI |
| MS.gene93093 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene93093 | PPI |
| MS.gene93093 | MS.gene023974 | PPI |
| MS.gene85452 | MS.gene93093 | PPI |
| MS.gene93093 | MS.gene058668 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93093.t1 | MTR_8g098325 | 98.881 | 536 | 6 | 0 | 1 | 536 | 1 | 536 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93093.t1 | AT1G63660 | 79.962 | 529 | 106 | 0 | 8 | 536 | 6 | 534 | 0.0 | 898 |
| MS.gene93093.t1 | AT1G63660 | 77.156 | 429 | 98 | 0 | 8 | 436 | 6 | 434 | 0.0 | 706 |
Find 156 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCTTACAAAGCTTAA+AGG | 0.212229 | 4.2:-6431571 | MS.gene93093:CDS |
| TGTATAAAGGTACGTCAATT+AGG | 0.224273 | 4.2:-6431162 | MS.gene93093:intron |
| TGGTCTTGCAGTTAGAGTTC+TGG | 0.234935 | 4.2:-6431085 | MS.gene93093:CDS |
| TCCCCGACGGCTTTCTTCAA+TGG | 0.264395 | 4.2:-6432552 | MS.gene93093:CDS |
| CTTTAAGCTTTGTAAGAAAT+TGG | 0.278879 | 4.2:+6431572 | None:intergenic |
| CAGACCTTCTTACTTGGTTC+AGG | 0.287543 | 4.2:-6431452 | MS.gene93093:CDS |
| CATGTCATTTGTGCCTTATC+TGG | 0.306235 | 4.2:-6431860 | MS.gene93093:CDS |
| GAAGCTGTTACTCTTCCTTC+TGG | 0.306647 | 4.2:-6432334 | MS.gene93093:CDS |
| CCCCGACGGCTTTCTTCAAT+GGG | 0.310713 | 4.2:-6432551 | MS.gene93093:CDS |
| CTGGCCTTTATGACGTAATA+TGG | 0.320042 | 4.2:-6430899 | MS.gene93093:CDS |
| TTGGACATAATCAGATTGTT+TGG | 0.324863 | 4.2:-6432372 | MS.gene93093:CDS |
| TTGCTGTGTCTATAGGTATA+AGG | 0.328120 | 4.2:-6431665 | MS.gene93093:intron |
| GCCAATGGCTTTATGAACTA+TGG | 0.344313 | 4.2:+6431811 | None:intergenic |
| ATACTGAAGACCATAAAATT+TGG | 0.353194 | 4.2:+6432252 | None:intergenic |
| GAAGTAAAGAGGAAAATTAT+TGG | 0.356749 | 4.2:-6431535 | MS.gene93093:CDS |
| GGTCTTGCAGTTAGAGTTCT+GGG | 0.357052 | 4.2:-6431084 | MS.gene93093:CDS |
| GTATGGCCGGATGGAAATTA+AGG | 0.366637 | 4.2:-6432431 | MS.gene93093:CDS |
| GTCGGGGAAGGAAGGGGAAT+CGG | 0.371614 | 4.2:+6432567 | None:intergenic |
| AGTTTCAATTTCATATCCTT+TGG | 0.386250 | 4.2:+6431331 | None:intergenic |
| GTTGGAAACACGCAGGAGTA+TGG | 0.395537 | 4.2:-6432448 | MS.gene93093:CDS |
| TCCAATGCAGTTCCTGTTCT+CGG | 0.396120 | 4.2:-6432523 | MS.gene93093:CDS |
| GAGAGAAAACGGAGAGGCTT+CGG | 0.409425 | 4.2:+6432683 | None:intergenic |
| GGCTCTTGATGGTATGGGAA+TGG | 0.412411 | 4.2:+6431374 | None:intergenic |
| GACATTATGATGGCTCTTGA+TGG | 0.415267 | 4.2:+6431363 | None:intergenic |
| TACCTGTCGGAGAACATCTA+AGG | 0.416589 | 4.2:+6431041 | None:intergenic |
| GCTCTTGATGGTATGGGAAT+GGG | 0.417699 | 4.2:+6431375 | None:intergenic |
| TCGGGGAAGGAAGGGGAATC+GGG | 0.419706 | 4.2:+6432568 | None:intergenic |
| TTCTTACCAGTAAGATCTGT+TGG | 0.422935 | 4.2:-6430861 | MS.gene93093:CDS |
| TGAACTCCAACAGATCTTAC+TGG | 0.423500 | 4.2:+6430855 | None:intergenic |
| GTAAGATCTGTTGGAGTTCA+AGG | 0.429733 | 4.2:-6430852 | MS.gene93093:CDS |
| GCACAAATGACATGCTCATC+AGG | 0.431096 | 4.2:+6431869 | None:intergenic |
| GGGCATGATTCAATCACATC+AGG | 0.436861 | 4.2:+6431418 | None:intergenic |
| GTATAAAGGTACGTCAATTA+GGG | 0.444870 | 4.2:-6431161 | MS.gene93093:intron |
| GTGGAAGATGGAGGATGTGT+TGG | 0.444993 | 4.2:-6431927 | MS.gene93093:CDS |
| CGTCATCCCTTCCCTGGGCC+TGG | 0.447113 | 4.2:-6431105 | MS.gene93093:CDS |
| TGGAAGCAGACCTTCTTACT+TGG | 0.447736 | 4.2:-6431458 | MS.gene93093:CDS |
| GATGTTTGTGGGATTTCAGC+AGG | 0.450199 | 4.2:-6431950 | MS.gene93093:CDS |
| GACTCATACGCCGGAGGGAA+TGG | 0.454303 | 4.2:-6431996 | MS.gene93093:CDS |
| CAAAAGCTAGAAAAGGAACT+TGG | 0.456695 | 4.2:-6431478 | MS.gene93093:CDS |
| CTAAAACGTCATCCCTTCCC+TGG | 0.460144 | 4.2:-6431111 | MS.gene93093:CDS |
| TCCTTCTGGTTTCAATGTCG+TGG | 0.462035 | 4.2:-6432320 | MS.gene93093:CDS |
| CCCTCCCTCGTCATTCTCTC+CGG | 0.466714 | 4.2:-6432613 | MS.gene93093:CDS |
| TATGATGGCTCTTGATGGTA+TGG | 0.468360 | 4.2:+6431368 | None:intergenic |
| CGAAGTCGAGGATGAGAACT+AGG | 0.468903 | 4.2:+6432740 | None:intergenic |
| TCCTTGAAAAGTAGTTTAAG+TGG | 0.473279 | 4.2:+6431301 | None:intergenic |
| AATCGGGAGTGTGAACGGAG+TGG | 0.473517 | 4.2:+6432584 | None:intergenic |
| TTGTTGACAATGGCTTGCTC+AGG | 0.477269 | 4.2:-6431769 | MS.gene93093:intron |
| ATCGGGAGTGTGAACGGAGT+GGG | 0.478020 | 4.2:+6432585 | None:intergenic |
| AGACCTTCTTACTTGGTTCA+GGG | 0.478848 | 4.2:-6431451 | MS.gene93093:CDS |
| CTTGCCATATTACGTCATAA+AGG | 0.478901 | 4.2:+6430895 | None:intergenic |
| TTATGTCCAACTTTCTCAGC+AGG | 0.480136 | 4.2:+6432385 | None:intergenic |
| GCAGCATCAACACACTCAAC+TGG | 0.486387 | 4.2:+6431598 | None:intergenic |
| TTCAGTGTTTCCATTCCCTC+CGG | 0.487027 | 4.2:+6431986 | None:intergenic |
| CAGCTTCTTGTTAGCCGTCT+CGG | 0.488371 | 4.2:-6432484 | MS.gene93093:CDS |
| TGTGATGGAAACCTTTAAAA+CGG | 0.496167 | 4.2:-6431632 | MS.gene93093:CDS |
| AAACGGAGAGGCTTCGGATA+CGG | 0.496736 | 4.2:+6432689 | None:intergenic |
| CCGTAGCAGATACCGAGAAC+AGG | 0.498393 | 4.2:+6432511 | None:intergenic |
| TTTGGACCTTAATTTCCATC+CGG | 0.502860 | 4.2:+6432425 | None:intergenic |
| GCCCATTGAAGAAAGCCGTC+GGG | 0.506662 | 4.2:+6432550 | None:intergenic |
| GAAAGCCGTCGGGGAAGGAA+GGG | 0.507848 | 4.2:+6432560 | None:intergenic |
| GATTTCAGCAGGGTGGAAGA+TGG | 0.508686 | 4.2:-6431939 | MS.gene93093:CDS |
| GTTGAGGCAGAGAGAGAAAA+CGG | 0.509193 | 4.2:+6432672 | None:intergenic |
| TGTCTATAGGTATAAGGAGC+AGG | 0.509880 | 4.2:-6431659 | MS.gene93093:intron |
| GGAATCAACACCACCAGATA+AGG | 0.510348 | 4.2:+6431847 | None:intergenic |
| GAAGATGGAGGATGTGTTGG+AGG | 0.511074 | 4.2:-6431924 | MS.gene93093:CDS |
| GAAGACCACCGACATTATGA+TGG | 0.513566 | 4.2:+6431353 | None:intergenic |
| TCATGCCCACCACCTGGAAG+TGG | 0.514563 | 4.2:-6431403 | MS.gene93093:CDS |
| CATTCCATCTTGACTTGTCA+CGG | 0.515702 | 4.2:+6430791 | None:intergenic |
| TTCAATCACATCAGGGTACA+AGG | 0.515784 | 4.2:+6431426 | None:intergenic |
| AGGGGAATCGGGAGTGTGAA+CGG | 0.516292 | 4.2:+6432579 | None:intergenic |
| GTGAACGGAGTGGGGACCAC+CGG | 0.517539 | 4.2:+6432594 | None:intergenic |
| AAAGTGATTAATAATACAGT+GGG | 0.519092 | 4.2:-6431893 | MS.gene93093:CDS |
| TGGGAAGGTGACTCATACGC+CGG | 0.519837 | 4.2:-6432005 | MS.gene93093:intron |
| AAAGCCGTCGGGGAAGGAAG+GGG | 0.520124 | 4.2:+6432561 | None:intergenic |
| TATTCCCACTCAATTGTTGA+AGG | 0.524026 | 4.2:+6430095 | None:intergenic |
| ATTCAGTCAATCAAAGATGC+TGG | 0.527113 | 4.2:-6430918 | MS.gene93093:CDS |
| TGCCTTAGATGTTCTCCGAC+AGG | 0.531680 | 4.2:-6431043 | MS.gene93093:intron |
| AGAAAGCCGTCGGGGAAGGA+AGG | 0.532276 | 4.2:+6432559 | None:intergenic |
| CCGGAGAGAATGACGAGGGA+GGG | 0.536699 | 4.2:+6432613 | None:intergenic |
| TAAGGAGCAGGAACGTGTGA+TGG | 0.541741 | 4.2:-6431647 | MS.gene93093:CDS |
| TGCAAGACCAGGCCCAGGGA+AGG | 0.542703 | 4.2:+6431098 | None:intergenic |
| ACCATAGTTCATAAAGCCAT+TGG | 0.544087 | 4.2:-6431812 | MS.gene93093:CDS |
| CGGCTCTGAGTGCAACAACA+TGG | 0.545340 | 4.2:+6430811 | None:intergenic |
| TAAAACGTCATCCCTTCCCT+GGG | 0.546430 | 4.2:-6431110 | MS.gene93093:CDS |
| GCAAGACCAGGCCCAGGGAA+GGG | 0.552040 | 4.2:+6431099 | None:intergenic |
| CGGAGAGAATGACGAGGGAG+GGG | 0.552242 | 4.2:+6432614 | None:intergenic |
| ACCGAGAACAGGAACTGCAT+TGG | 0.554925 | 4.2:+6432522 | None:intergenic |
| ACGTCAATTAGGGAGGATCA+TGG | 0.556420 | 4.2:-6431151 | MS.gene93093:CDS |
| GGAGGGGTTGAGTTCAGTGA+TGG | 0.557696 | 4.2:+6432630 | None:intergenic |
| TGACAGATCCTGAAGTAAAG+AGG | 0.559123 | 4.2:-6431546 | MS.gene93093:CDS |
| TTGAAGAAAGCCGTCGGGGA+AGG | 0.559604 | 4.2:+6432555 | None:intergenic |
| CCTGTTCTCGGTATCTGCTA+CGG | 0.560452 | 4.2:-6432511 | MS.gene93093:CDS |
| CTAGTTCTCATCCTCGACTT+CGG | 0.560880 | 4.2:-6432739 | MS.gene93093:CDS |
| CGCGAACTTCACCGCCGAGA+CGG | 0.560925 | 4.2:+6432470 | None:intergenic |
| ATTGAATCATGCCCACCACC+TGG | 0.563547 | 4.2:-6431409 | MS.gene93093:CDS |
| GTTTCACGCAAAATCTGTAA+TGG | 0.563756 | 4.2:-6430164 | MS.gene93093:CDS |
| CTAACTGCAAGACCAGGCCC+AGG | 0.566444 | 4.2:+6431093 | None:intergenic |
| GTTCCCTGAACCAAGTAAGA+AGG | 0.567722 | 4.2:+6431448 | None:intergenic |
| TCCCTCGTCATTCTCTCCGG+TGG | 0.567925 | 4.2:-6432610 | MS.gene93093:CDS |
| TCCCACTCAATTGTTGAAGG+AGG | 0.570083 | 4.2:+6430098 | None:intergenic |
| GGGGTTCTCGATGGCAGCGA+CGG | 0.572007 | 4.2:+6432279 | None:intergenic |
| TTCATAAAGCCATTGGCGAT+AGG | 0.572442 | 4.2:-6431805 | MS.gene93093:CDS |
| GCCTCCTTCAACAATTGAGT+GGG | 0.574342 | 4.2:-6430099 | MS.gene93093:CDS |
| GAAACACGCAGGAGTATGGC+CGG | 0.577417 | 4.2:-6432444 | MS.gene93093:CDS |
| AGACCATAAAATTTGGCAGA+GGG | 0.578757 | 4.2:+6432259 | None:intergenic |
| CTCGGCGGTGAAGTTCGCGT+TGG | 0.580756 | 4.2:-6432466 | MS.gene93093:CDS |
| AAGATGGAATGACAGCAGAC+TGG | 0.581634 | 4.2:-6430779 | MS.gene93093:intron |
| GGCTCTGAGTGCAACAACAT+GGG | 0.583042 | 4.2:+6430812 | None:intergenic |
| GAAGAGAAGAAGTGCCGTTG+AGG | 0.585102 | 4.2:+6432656 | None:intergenic |
| TCGGGAGTGTGAACGGAGTG+GGG | 0.587305 | 4.2:+6432586 | None:intergenic |
| AGCCCATTGAAGAAAGCCGT+CGG | 0.590042 | 4.2:+6432549 | None:intergenic |
| AGAACTCTAACTGCAAGACC+AGG | 0.590896 | 4.2:+6431087 | None:intergenic |
| CACGCAGGAGTATGGCCGGA+TGG | 0.594351 | 4.2:-6432440 | MS.gene93093:CDS |
| GTCATTTGTGCCTTATCTGG+TGG | 0.595067 | 4.2:-6431857 | MS.gene93093:CDS |
| ATGTTTGTGGGATTTCAGCA+GGG | 0.596794 | 4.2:-6431949 | MS.gene93093:CDS |
| CATGCCCACCACCTGGAAGT+GGG | 0.599206 | 4.2:-6431402 | MS.gene93093:CDS |
| TACTGGTAAGAAAACTGCAA+AGG | 0.601593 | 4.2:+6430872 | None:intergenic |
| ATCAAGAGCCATCATAATGT+CGG | 0.606367 | 4.2:-6431361 | MS.gene93093:CDS |
| TTTGGCAGAGGGGTTCTCGA+TGG | 0.608956 | 4.2:+6432270 | None:intergenic |
| AGCCTCCTTCAACAATTGAG+TGG | 0.609163 | 4.2:-6430100 | MS.gene93093:CDS |
| AACTATGGTAGCAGCAACAG+TGG | 0.609789 | 4.2:+6431826 | None:intergenic |
| GACCATAAAATTTGGCAGAG+GGG | 0.610716 | 4.2:+6432260 | None:intergenic |
| ACAATGAAGCCTATCGCCAA+TGG | 0.610723 | 4.2:+6431796 | None:intergenic |
| AGAGCCGTGACAAGTCAAGA+TGG | 0.616452 | 4.2:-6430795 | MS.gene93093:CDS |
| TGTATTGAGAACCGAAGTCG+AGG | 0.618773 | 4.2:+6432728 | None:intergenic |
| GTTCTGGGTGACGTGACTGA+AGG | 0.621656 | 4.2:-6431069 | MS.gene93093:CDS |
| TAATGTCGGTGGTCTTCCAA+AGG | 0.622152 | 4.2:-6431347 | MS.gene93093:CDS |
| AAGGTGACTCATACGCCGGA+GGG | 0.623263 | 4.2:-6432001 | MS.gene93093:CDS |
| CAGATTGTTTGGATGAGTCA+TGG | 0.625708 | 4.2:-6432361 | MS.gene93093:CDS |
| CAAAGTGATTAATAATACAG+TGG | 0.630032 | 4.2:-6431894 | MS.gene93093:CDS |
| TTCGGATACGGCGAGTGATG+AGG | 0.631967 | 4.2:+6432701 | None:intergenic |
| GATTCCCCTTCCTTCCCCGA+CGG | 0.633487 | 4.2:-6432565 | MS.gene93093:CDS |
| TTCAGCAGGGTGGAAGATGG+AGG | 0.635225 | 4.2:-6431936 | MS.gene93093:CDS |
| ATGATGGCTCTTGATGGTAT+GGG | 0.637099 | 4.2:+6431369 | None:intergenic |
| CCCATTGAAGAAAGCCGTCG+GGG | 0.638613 | 4.2:+6432551 | None:intergenic |
| GTCGTGGCACGAAGTCAACA+AGG | 0.638723 | 4.2:-6432304 | MS.gene93093:CDS |
| AGGATCATGGATGTCCCTGA+GGG | 0.638998 | 4.2:-6431138 | MS.gene93093:CDS |
| GCCACGACATTGAAACCAGA+AGG | 0.640831 | 4.2:+6432319 | None:intergenic |
| ACCGGAGAGAATGACGAGGG+AGG | 0.643815 | 4.2:+6432612 | None:intergenic |
| AAGACCATAAAATTTGGCAG+AGG | 0.647998 | 4.2:+6432258 | None:intergenic |
| GCACAACACGATTCACACCA+CGG | 0.648587 | 4.2:+6430138 | None:intergenic |
| GGCATGATTCAATCACATCA+GGG | 0.655836 | 4.2:+6431419 | None:intergenic |
| TAAAGGTACGTCAATTAGGG+AGG | 0.658939 | 4.2:-6431158 | MS.gene93093:intron |
| AAGAGCCATCATAATGTCGG+TGG | 0.662337 | 4.2:-6431358 | MS.gene93093:CDS |
| GAAGGTGACTCATACGCCGG+AGG | 0.662543 | 4.2:-6432002 | MS.gene93093:intron |
| GAGGATCATGGATGTCCCTG+AGG | 0.671870 | 4.2:-6431139 | MS.gene93093:CDS |
| ACCACCGGAGAGAATGACGA+GGG | 0.673607 | 4.2:+6432609 | None:intergenic |
| TAACTGCAAGACCAGGCCCA+GGG | 0.675071 | 4.2:+6431094 | None:intergenic |
| TTTGTGGGATTTCAGCAGGG+TGG | 0.679722 | 4.2:-6431946 | MS.gene93093:CDS |
| AAAATCTGTAATGGTGTCCG+TGG | 0.698688 | 4.2:-6430155 | MS.gene93093:CDS |
| GGCAGAGAGAGAAAACGGAG+AGG | 0.709889 | 4.2:+6432677 | None:intergenic |
| GACCACCGGAGAGAATGACG+AGG | 0.712882 | 4.2:+6432608 | None:intergenic |
| AGTTCGCGTTGGAAACACGC+AGG | 0.714465 | 4.2:-6432455 | MS.gene93093:CDS |
| TGGTCTTCAGTATCACCCTG+AGG | 0.715570 | 4.2:-6432242 | MS.gene93093:intron |
| CTTCTTGTTAGCCGTCTCGG+CGG | 0.726294 | 4.2:-6432481 | MS.gene93093:CDS |
| AAGTGATTAATAATACAGTG+GGG | 0.782696 | 4.2:-6431892 | MS.gene93093:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTATTTCTTTTTTAAA+TGG | - | chr4.2:6432193-6432212 | MS.gene93093:intron | 10.0% |
| !! | AAATTGAATCAAAATATTGA+AGG | + | chr4.2:6431901-6431920 | None:intergenic | 15.0% |
| !! | TTTATTCATTGTAAAGATAT+TGG | - | chr4.2:6431136-6431155 | MS.gene93093:CDS | 15.0% |
| !!! | AACCTTTAAAATTTCAAATA+CGG | - | chr4.2:6432593-6432612 | MS.gene93093:CDS | 15.0% |
| !!! | ATTGTTATTTGTTCTTTTTT+GGG | - | chr4.2:6430842-6430861 | MS.gene93093:CDS | 15.0% |
| !!! | TGATAGAACAAAATTTATTT+TGG | - | chr4.2:6432262-6432281 | MS.gene93093:CDS | 15.0% |
| !! | AAAGTGATTAATAATACAGT+GGG | - | chr4.2:6430973-6430992 | MS.gene93093:intron | 20.0% |
| !! | CTGTTAAAAAGAAAAAACTA+AGG | + | chr4.2:6432376-6432395 | None:intergenic | 20.0% |
| !! | GAAAACAAAATAAAGTTATG+CGG | + | chr4.2:6432177-6432196 | None:intergenic | 20.0% |
| !! | TAAAGATATTGGATTACAAA+CGG | - | chr4.2:6431147-6431166 | MS.gene93093:CDS | 20.0% |
| !!! | AACTTGATAAAATGATAATG+TGG | + | chr4.2:6432454-6432473 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTCCTTGTATAA+AGG | - | chr4.2:6431691-6431710 | MS.gene93093:intron | 20.0% |
| !!! | ATTTTCTATTTGATGTTTGT+GGG | - | chr4.2:6430905-6430924 | MS.gene93093:CDS | 20.0% |
| !!! | GATTGTTATTTGTTCTTTTT+TGG | - | chr4.2:6430841-6430860 | MS.gene93093:CDS | 20.0% |
| !!! | TAAGGTATATTTTAGCTTTT+AGG | + | chr4.2:6432358-6432377 | None:intergenic | 20.0% |
| !!! | TGCTAGTTCATTTTAATAAT+TGG | - | chr4.2:6432558-6432577 | MS.gene93093:CDS | 20.0% |
| ! | AAGTGATTAATAATACAGTG+GGG | - | chr4.2:6430974-6430993 | MS.gene93093:intron | 25.0% |
| ! | AATCAAAATTAAACACAAGC+AGG | + | chr4.2:6430666-6430685 | None:intergenic | 25.0% |
| ! | AGGTATATTATTATACCTCA+GGG | + | chr4.2:6430642-6430661 | None:intergenic | 25.0% |
| ! | AGTTTCAATTTCATATCCTT+TGG | + | chr4.2:6431538-6431557 | None:intergenic | 25.0% |
| ! | ATACTGAAGACCATAAAATT+TGG | + | chr4.2:6430617-6430636 | None:intergenic | 25.0% |
| ! | CAAAGTGATTAATAATACAG+TGG | - | chr4.2:6430972-6430991 | MS.gene93093:intron | 25.0% |
| ! | CAATTTCTTACAAAGCTTAA+AGG | - | chr4.2:6431295-6431314 | MS.gene93093:intron | 25.0% |
| ! | CTATCAATCAATTATATCGA+TGG | + | chr4.2:6430779-6430798 | None:intergenic | 25.0% |
| ! | GAAGTAAAGAGGAAAATTAT+TGG | - | chr4.2:6431331-6431350 | MS.gene93093:CDS | 25.0% |
| ! | TAGGTATATTATTATACCTC+AGG | + | chr4.2:6430643-6430662 | None:intergenic | 25.0% |
| ! | TGTAATTTGAATTGAATTCC+AGG | - | chr4.2:6432649-6432668 | MS.gene93093:CDS | 25.0% |
| ! | TTAAAATGAACTAGCATCAA+AGG | + | chr4.2:6432554-6432573 | None:intergenic | 25.0% |
| !! | ATAATTTTCCTCTTTACTTC+AGG | + | chr4.2:6431331-6431350 | None:intergenic | 25.0% |
| !! | CATTTTCTATTTGATGTTTG+TGG | - | chr4.2:6430904-6430923 | MS.gene93093:CDS | 25.0% |
| !! | CTTTAAGCTTTGTAAGAAAT+TGG | + | chr4.2:6431297-6431316 | None:intergenic | 25.0% |
| !! | GATTCAATTTTTCTTTTCTC+AGG | - | chr4.2:6431911-6431930 | MS.gene93093:CDS | 25.0% |
| !! | TAAATGAAGATCCGTTTTAA+AGG | + | chr4.2:6431248-6431267 | None:intergenic | 25.0% |
| !!! | AGCCGTATTTGAAATTTTAA+AGG | + | chr4.2:6432598-6432617 | None:intergenic | 25.0% |
| !!! | ATATTTTAGCTTTTAGGACT+TGG | + | chr4.2:6432352-6432371 | None:intergenic | 25.0% |
| !!! | TATTTTAGCTTTTAGGACTT+GGG | + | chr4.2:6432351-6432370 | None:intergenic | 25.0% |
| !!! | TCTATCAAATAGTTTGCTAA+AGG | + | chr4.2:6432249-6432268 | None:intergenic | 25.0% |
| !!! | TTATTTGTTCTTTTTTGGGA+AGG | - | chr4.2:6430846-6430865 | MS.gene93093:CDS | 25.0% |
| AAAATTAAACACAAGCAGGT+AGG | + | chr4.2:6430662-6430681 | None:intergenic | 30.0% | |
| AATGGTACCAAATTACCATT+AGG | - | chr4.2:6432211-6432230 | MS.gene93093:intron | 30.0% | |
| AATTGACGTACCTTTATACA+AGG | + | chr4.2:6431704-6431723 | None:intergenic | 30.0% | |
| ATCATCTTAATAGCACTTTG+CGG | - | chr4.2:6432622-6432641 | MS.gene93093:CDS | 30.0% | |
| TCCTTGAAAAGTAGTTTAAG+TGG | + | chr4.2:6431568-6431587 | None:intergenic | 30.0% | |
| TTAACCTCCTAATGGTAATT+TGG | + | chr4.2:6432221-6432240 | None:intergenic | 30.0% | |
| TTGGAAATATATCAGCTTCT+GGG | - | chr4.2:6432514-6432533 | MS.gene93093:CDS | 30.0% | |
| TTGGACATAATCAGATTGTT+TGG | - | chr4.2:6430494-6430513 | MS.gene93093:intron | 30.0% | |
| TTTCAACTGAAGTATGCATA+TGG | - | chr4.2:6432115-6432134 | MS.gene93093:intron | 30.0% | |
| ! | AGGTCTGATTTTACTTGTTT+TGG | + | chr4.2:6430109-6430128 | None:intergenic | 30.0% |
| ! | GTATAAAGGTACGTCAATTA+GGG | - | chr4.2:6431705-6431724 | MS.gene93093:intron | 30.0% |
| ! | TGTATAAAGGTACGTCAATT+AGG | - | chr4.2:6431704-6431723 | MS.gene93093:intron | 30.0% |
| ! | TGTGATGGAAACCTTTAAAA+CGG | - | chr4.2:6431234-6431253 | MS.gene93093:intron | 30.0% |
| ! | TTTTGCTCAAAAGCTAGAAA+AGG | - | chr4.2:6431381-6431400 | MS.gene93093:CDS | 30.0% |
| !! | CATTGTGTTTTTGTTGACAA+TGG | - | chr4.2:6431087-6431106 | MS.gene93093:CDS | 30.0% |
| !! | TAAACTACTTTTCAAGGATG+AGG | - | chr4.2:6431570-6431589 | MS.gene93093:CDS | 30.0% |
| AACGACCCTAGTATCTAATT+AGG | + | chr4.2:6432487-6432506 | None:intergenic | 35.0% | |
| AAGACCATAAAATTTGGCAG+AGG | + | chr4.2:6430611-6430630 | None:intergenic | 35.0% | |
| AATGAATAAACCGAGACTAG+TGG | + | chr4.2:6431126-6431145 | None:intergenic | 35.0% | |
| ACCATAGTTCATAAAGCCAT+TGG | - | chr4.2:6431054-6431073 | MS.gene93093:CDS | 35.0% | |
| ACGAGCCTAATTAGATACTA+GGG | - | chr4.2:6432479-6432498 | MS.gene93093:CDS | 35.0% | |
| AGACCATAAAATTTGGCAGA+GGG | + | chr4.2:6430610-6430629 | None:intergenic | 35.0% | |
| ATCAAGAGCCATCATAATGT+CGG | - | chr4.2:6431505-6431524 | MS.gene93093:CDS | 35.0% | |
| ATTCAGTCAATCAAAGATGC+TGG | - | chr4.2:6431948-6431967 | MS.gene93093:CDS | 35.0% | |
| CAAAAGCTAGAAAAGGAACT+TGG | - | chr4.2:6431388-6431407 | MS.gene93093:CDS | 35.0% | |
| CAGAAGCTGATATATTTCCA+AGG | + | chr4.2:6432515-6432534 | None:intergenic | 35.0% | |
| CTTGCCATATTACGTCATAA+AGG | + | chr4.2:6431974-6431993 | None:intergenic | 35.0% | |
| CTTGGAAATATATCAGCTTC+TGG | - | chr4.2:6432513-6432532 | MS.gene93093:CDS | 35.0% | |
| GTTTCACGCAAAATCTGTAA+TGG | - | chr4.2:6432702-6432721 | MS.gene93093:CDS | 35.0% | |
| TACTGGTAAGAAAACTGCAA+AGG | + | chr4.2:6431997-6432016 | None:intergenic | 35.0% | |
| TATTCCCACTCAATTGTTGA+AGG | + | chr4.2:6432774-6432793 | None:intergenic | 35.0% | |
| TTCTTACCAGTAAGATCTGT+TGG | - | chr4.2:6432005-6432024 | MS.gene93093:intron | 35.0% | |
| TTGCTGTGTCTATAGGTATA+AGG | - | chr4.2:6431201-6431220 | MS.gene93093:intron | 35.0% | |
| TTTGGACCTTAATTTCCATC+CGG | + | chr4.2:6430444-6430463 | None:intergenic | 35.0% | |
| ! | ATGATGCTGGATAACTCTTT+TGG | - | chr4.2:6432140-6432159 | MS.gene93093:intron | 35.0% |
| ! | GATTTTGTTGCTGTGTCTAT+AGG | - | chr4.2:6431194-6431213 | MS.gene93093:intron | 35.0% |
| ! | TCTCTCACACAAGCTTTTAA+TGG | + | chr4.2:6432307-6432326 | None:intergenic | 35.0% |
| ! | TTTTGCGTGAAACATCATCA+AGG | + | chr4.2:6432695-6432714 | None:intergenic | 35.0% |
| !! | GCCACTTAAACTACTTTTCA+AGG | - | chr4.2:6431564-6431583 | MS.gene93093:CDS | 35.0% |
| AAAATCTGTAATGGTGTCCG+TGG | - | chr4.2:6432711-6432730 | MS.gene93093:CDS | 40.0% | |
| AGACCTTCTTACTTGGTTCA+GGG | - | chr4.2:6431415-6431434 | MS.gene93093:CDS | 40.0% | |
| AGGCACATTTAACCTCCTAA+TGG | + | chr4.2:6432229-6432248 | None:intergenic | 40.0% | |
| ATGTTTGTGGGATTTCAGCA+GGG | - | chr4.2:6430917-6430936 | MS.gene93093:CDS | 40.0% | |
| CACGAGCCTAATTAGATACT+AGG | - | chr4.2:6432478-6432497 | MS.gene93093:CDS | 40.0% | |
| CAGATTGTTTGGATGAGTCA+TGG | - | chr4.2:6430505-6430524 | MS.gene93093:intron | 40.0% | |
| GACATTATGATGGCTCTTGA+TGG | + | chr4.2:6431506-6431525 | None:intergenic | 40.0% | |
| GACCATAAAATTTGGCAGAG+GGG | + | chr4.2:6430609-6430628 | None:intergenic | 40.0% | |
| GGCATGATTCAATCACATCA+GGG | + | chr4.2:6431450-6431469 | None:intergenic | 40.0% | |
| GGTACCAAATTACCATTAGG+AGG | - | chr4.2:6432214-6432233 | MS.gene93093:intron | 40.0% | |
| GTAAGATCTGTTGGAGTTCA+AGG | - | chr4.2:6432014-6432033 | MS.gene93093:intron | 40.0% | |
| TATGCATATGGCTATGATGC+TGG | - | chr4.2:6432127-6432146 | MS.gene93093:intron | 40.0% | |
| TGAACTCCAACAGATCTTAC+TGG | + | chr4.2:6432014-6432033 | None:intergenic | 40.0% | |
| TGACAGATCCTGAAGTAAAG+AGG | - | chr4.2:6431320-6431339 | MS.gene93093:CDS | 40.0% | |
| TGTCTATAGGTATAAGGAGC+AGG | - | chr4.2:6431207-6431226 | MS.gene93093:intron | 40.0% | |
| TTATGTCCAACTTTCTCAGC+AGG | + | chr4.2:6430484-6430503 | None:intergenic | 40.0% | |
| TTCAATCACATCAGGGTACA+AGG | + | chr4.2:6431443-6431462 | None:intergenic | 40.0% | |
| TTCATAAAGCCATTGGCGAT+AGG | - | chr4.2:6431061-6431080 | MS.gene93093:CDS | 40.0% | |
| ! | AACCCCTCTGCCAAATTTTA+TGG | - | chr4.2:6430604-6430623 | MS.gene93093:intron | 40.0% |
| ! | ATGATGGCTCTTGATGGTAT+GGG | + | chr4.2:6431500-6431519 | None:intergenic | 40.0% |
| ! | CATGTCATTTGTGCCTTATC+TGG | - | chr4.2:6431006-6431025 | MS.gene93093:intron | 40.0% |
| ! | CTGGCCTTTATGACGTAATA+TGG | - | chr4.2:6431967-6431986 | MS.gene93093:CDS | 40.0% |
| ! | CTTTTTCCTGCTGAGAAAGT+TGG | - | chr4.2:6430475-6430494 | MS.gene93093:intron | 40.0% |
| ! | TAAAGGTACGTCAATTAGGG+AGG | - | chr4.2:6431708-6431727 | MS.gene93093:intron | 40.0% |
| ! | TATGATGGCTCTTGATGGTA+TGG | + | chr4.2:6431501-6431520 | None:intergenic | 40.0% |
| !! | CATTCCATCTTGACTTGTCA+CGG | + | chr4.2:6432078-6432097 | None:intergenic | 40.0% |
| !! | GCCAATGGCTTTATGAACTA+TGG | + | chr4.2:6431058-6431077 | None:intergenic | 40.0% |
| !!! | GACGTTTTAGAAATCCCTCA+GGG | + | chr4.2:6431745-6431764 | None:intergenic | 40.0% |
| !!! | TGACGTTTTAGAAATCCCTC+AGG | + | chr4.2:6431746-6431765 | None:intergenic | 40.0% |
| AACTATGGTAGCAGCAACAG+TGG | + | chr4.2:6431043-6431062 | None:intergenic | 45.0% | |
| AAGAGCCATCATAATGTCGG+TGG | - | chr4.2:6431508-6431527 | MS.gene93093:CDS | 45.0% | |
| AAGATGGAATGACAGCAGAC+TGG | - | chr4.2:6432087-6432106 | MS.gene93093:intron | 45.0% | |
| ACAATGAAGCCTATCGCCAA+TGG | + | chr4.2:6431073-6431092 | None:intergenic | 45.0% | |
| ACGTCAATTAGGGAGGATCA+TGG | - | chr4.2:6431715-6431734 | MS.gene93093:intron | 45.0% | |
| AGAACTCTAACTGCAAGACC+AGG | + | chr4.2:6431782-6431801 | None:intergenic | 45.0% | |
| AGCCTCCTTCAACAATTGAG+TGG | - | chr4.2:6432766-6432785 | MS.gene93093:CDS | 45.0% | |
| CAAAAGCTCCATGTACCTGT+CGG | + | chr4.2:6431841-6431860 | None:intergenic | 45.0% | |
| CAGACCTTCTTACTTGGTTC+AGG | - | chr4.2:6431414-6431433 | MS.gene93093:CDS | 45.0% | |
| CTTGTGCTCAAAGTAGTACC+TGG | + | chr4.2:6432670-6432689 | None:intergenic | 45.0% | |
| GAAGACCACCGACATTATGA+TGG | + | chr4.2:6431516-6431535 | None:intergenic | 45.0% | |
| GAAGCTGTTACTCTTCCTTC+TGG | - | chr4.2:6430532-6430551 | MS.gene93093:intron | 45.0% | |
| GATGTTTGTGGGATTTCAGC+AGG | - | chr4.2:6430916-6430935 | MS.gene93093:CDS | 45.0% | |
| GCACAAATGACATGCTCATC+AGG | + | chr4.2:6431000-6431019 | None:intergenic | 45.0% | |
| GCCTCCTTCAACAATTGAGT+GGG | - | chr4.2:6432767-6432786 | MS.gene93093:CDS | 45.0% | |
| GGAATCAACACCACCAGATA+AGG | + | chr4.2:6431022-6431041 | None:intergenic | 45.0% | |
| GGGCATGATTCAATCACATC+AGG | + | chr4.2:6431451-6431470 | None:intergenic | 45.0% | |
| GGTCTTGCAGTTAGAGTTCT+GGG | - | chr4.2:6431782-6431801 | MS.gene93093:CDS | 45.0% | |
| GTATGGCCGGATGGAAATTA+AGG | - | chr4.2:6430435-6430454 | MS.gene93093:intron | 45.0% | |
| GTCATTTGTGCCTTATCTGG+TGG | - | chr4.2:6431009-6431028 | MS.gene93093:intron | 45.0% | |
| GTTCCCTGAACCAAGTAAGA+AGG | + | chr4.2:6431421-6431440 | None:intergenic | 45.0% | |
| GTTGAGGCAGAGAGAGAAAA+CGG | + | chr4.2:6430197-6430216 | None:intergenic | 45.0% | |
| TAAAACGTCATCCCTTCCCT+GGG | - | chr4.2:6431756-6431775 | MS.gene93093:intron | 45.0% | |
| TAATGTCGGTGGTCTTCCAA+AGG | - | chr4.2:6431519-6431538 | MS.gene93093:CDS | 45.0% | |
| TACCTGTCGGAGAACATCTA+AGG | + | chr4.2:6431828-6431847 | None:intergenic | 45.0% | |
| TCCAATGCAGTTCCTGTTCT+CGG | - | chr4.2:6430343-6430362 | MS.gene93093:intron | 45.0% | |
| TCCCACTCAATTGTTGAAGG+AGG | + | chr4.2:6432771-6432790 | None:intergenic | 45.0% | |
| TGGAAGCAGACCTTCTTACT+TGG | - | chr4.2:6431408-6431427 | MS.gene93093:CDS | 45.0% | |
| TGTATTGAGAACCGAAGTCG+AGG | + | chr4.2:6430141-6430160 | None:intergenic | 45.0% | |
| TTCAGTGTTTCCATTCCCTC+CGG | + | chr4.2:6430883-6430902 | None:intergenic | 45.0% | |
| ! | CTAGTTCTCATCCTCGACTT+CGG | - | chr4.2:6430127-6430146 | MS.gene93093:CDS | 45.0% |
| ! | GCTCTTGATGGTATGGGAAT+GGG | + | chr4.2:6431494-6431513 | None:intergenic | 45.0% |
| ! | GTTTTCTCTCTCTGCCTCAA+CGG | - | chr4.2:6430196-6430215 | MS.gene93093:CDS | 45.0% |
| ! | TGGTCTTGCAGTTAGAGTTC+TGG | - | chr4.2:6431781-6431800 | MS.gene93093:CDS | 45.0% |
| !! | TCCTTCTGGTTTCAATGTCG+TGG | - | chr4.2:6430546-6430565 | MS.gene93093:intron | 45.0% |
| !! | TTGTTGACAATGGCTTGCTC+AGG | - | chr4.2:6431097-6431116 | MS.gene93093:CDS | 45.0% |
| !!! | GAAAAAGAGCAGAGGCGTTT+TGG | + | chr4.2:6430462-6430481 | None:intergenic | 45.0% |
| AAACGGAGAGGCTTCGGATA+CGG | + | chr4.2:6430180-6430199 | None:intergenic | 50.0% | |
| ACCGAGAACAGGAACTGCAT+TGG | + | chr4.2:6430347-6430366 | None:intergenic | 50.0% | |
| ACTAGGGTCGTTATGCTCCT+TGG | - | chr4.2:6432495-6432514 | MS.gene93093:CDS | 50.0% | |
| AGAGCCGTGACAAGTCAAGA+TGG | - | chr4.2:6432071-6432090 | MS.gene93093:intron | 50.0% | |
| AGCCCATTGAAGAAAGCCGT+CGG | + | chr4.2:6430320-6430339 | None:intergenic | 50.0% | |
| AGGATCATGGATGTCCCTGA+GGG | - | chr4.2:6431728-6431747 | MS.gene93093:intron | 50.0% | |
| ATTGAATCATGCCCACCACC+TGG | - | chr4.2:6431457-6431476 | MS.gene93093:CDS | 50.0% | |
| CAGCTTCTTGTTAGCCGTCT+CGG | - | chr4.2:6430382-6430401 | MS.gene93093:intron | 50.0% | |
| CCTGTTCTCGGTATCTGCTA+CGG | - | chr4.2:6430355-6430374 | MS.gene93093:intron | 50.0% | |
| CGAAGTCGAGGATGAGAACT+AGG | + | chr4.2:6430129-6430148 | None:intergenic | 50.0% | |
| CTAAAACGTCATCCCTTCCC+TGG | - | chr4.2:6431755-6431774 | MS.gene93093:intron | 50.0% | |
| CTCAGCAGGAAAAAGAGCAG+AGG | + | chr4.2:6430470-6430489 | None:intergenic | 50.0% | |
| GAAGATGGAGGATGTGTTGG+AGG | - | chr4.2:6430942-6430961 | MS.gene93093:intron | 50.0% | |
| GAGAGAAAACGGAGAGGCTT+CGG | + | chr4.2:6430186-6430205 | None:intergenic | 50.0% | |
| GATGTTCTCCGACAGGTACA+TGG | - | chr4.2:6431830-6431849 | MS.gene93093:CDS | 50.0% | |
| GATTTCAGCAGGGTGGAAGA+TGG | - | chr4.2:6430927-6430946 | MS.gene93093:CDS | 50.0% | |
| GCACAACACGATTCACACCA+CGG | + | chr4.2:6432731-6432750 | None:intergenic | 50.0% | |
| GCAGCATCAACACACTCAAC+TGG | + | chr4.2:6431271-6431290 | None:intergenic | 50.0% | |
| GCCACGACATTGAAACCAGA+AGG | + | chr4.2:6430550-6430569 | None:intergenic | 50.0% | |
| GTGGAAGATGGAGGATGTGT+TGG | - | chr4.2:6430939-6430958 | MS.gene93093:intron | 50.0% | |
| GTTGGAAACACGCAGGAGTA+TGG | - | chr4.2:6430418-6430437 | MS.gene93093:intron | 50.0% | |
| TAAGGAGCAGGAACGTGTGA+TGG | - | chr4.2:6431219-6431238 | MS.gene93093:intron | 50.0% | |
| TAGGACTTGGGCAGATGTAC+AGG | + | chr4.2:6432339-6432358 | None:intergenic | 50.0% | |
| TGCCTTAGATGTTCTCCGAC+AGG | - | chr4.2:6431823-6431842 | MS.gene93093:CDS | 50.0% | |
| TGGTCTTCAGTATCACCCTG+AGG | - | chr4.2:6430624-6430643 | MS.gene93093:intron | 50.0% | |
| TTTGTGGGATTTCAGCAGGG+TGG | - | chr4.2:6430920-6430939 | MS.gene93093:CDS | 50.0% | |
| ! | GGCTCTTGATGGTATGGGAA+TGG | + | chr4.2:6431495-6431514 | None:intergenic | 50.0% |
| ! | TTTTCCCACTTCCAGGTGGT+GGG | + | chr4.2:6431471-6431490 | None:intergenic | 50.0% |
| !! | GAAGAGAAGAAGTGCCGTTG+AGG | + | chr4.2:6430213-6430232 | None:intergenic | 50.0% |
| !! | GAATGGGTTTTCCCACTTCC+AGG | + | chr4.2:6431478-6431497 | None:intergenic | 50.0% |
| !! | GGCTCTGAGTGCAACAACAT+GGG | + | chr4.2:6432057-6432076 | None:intergenic | 50.0% |
| AAGGTGACTCATACGCCGGA+GGG | - | chr4.2:6430865-6430884 | MS.gene93093:CDS | 55.0% | |
| ACCACCGGAGAGAATGACGA+GGG | + | chr4.2:6430260-6430279 | None:intergenic | 55.0% | |
| AGTTCGCGTTGGAAACACGC+AGG | - | chr4.2:6430411-6430430 | MS.gene93093:intron | 55.0% | |
| CCCATTGAAGAAAGCCGTCG+GGG | + | chr4.2:6430318-6430337 | None:intergenic | 55.0% | |
| CCCCGACGGCTTTCTTCAAT+GGG | - | chr4.2:6430315-6430334 | MS.gene93093:intron | 55.0% | |
| CCGTAGCAGATACCGAGAAC+AGG | + | chr4.2:6430358-6430377 | None:intergenic | 55.0% | |
| CTTCTTGTTAGCCGTCTCGG+CGG | - | chr4.2:6430385-6430404 | MS.gene93093:intron | 55.0% | |
| GAGGATCATGGATGTCCCTG+AGG | - | chr4.2:6431727-6431746 | MS.gene93093:intron | 55.0% | |
| GCCCATTGAAGAAAGCCGTC+GGG | + | chr4.2:6430319-6430338 | None:intergenic | 55.0% | |
| GGAGGGGTTGAGTTCAGTGA+TGG | + | chr4.2:6430239-6430258 | None:intergenic | 55.0% | |
| GGCAGAGAGAGAAAACGGAG+AGG | + | chr4.2:6430192-6430211 | None:intergenic | 55.0% | |
| GTCGTGGCACGAAGTCAACA+AGG | - | chr4.2:6430562-6430581 | MS.gene93093:intron | 55.0% | |
| TAACTGCAAGACCAGGCCCA+GGG | + | chr4.2:6431775-6431794 | None:intergenic | 55.0% | |
| TCCCCGACGGCTTTCTTCAA+TGG | - | chr4.2:6430314-6430333 | MS.gene93093:intron | 55.0% | |
| TGGGAAGGTGACTCATACGC+CGG | - | chr4.2:6430861-6430880 | MS.gene93093:CDS | 55.0% | |
| TTCAGCAGGGTGGAAGATGG+AGG | - | chr4.2:6430930-6430949 | MS.gene93093:CDS | 55.0% | |
| TTCGGATACGGCGAGTGATG+AGG | + | chr4.2:6430168-6430187 | None:intergenic | 55.0% | |
| TTGAAGAAAGCCGTCGGGGA+AGG | + | chr4.2:6430314-6430333 | None:intergenic | 55.0% | |
| TTTGGCAGAGGGGTTCTCGA+TGG | + | chr4.2:6430599-6430618 | None:intergenic | 55.0% | |
| ! | AATCGGGAGTGTGAACGGAG+TGG | + | chr4.2:6430285-6430304 | None:intergenic | 55.0% |
| ! | AGGGGAATCGGGAGTGTGAA+CGG | + | chr4.2:6430290-6430309 | None:intergenic | 55.0% |
| ! | ATCGGGAGTGTGAACGGAGT+GGG | + | chr4.2:6430284-6430303 | None:intergenic | 55.0% |
| ! | GAAACACGCAGGAGTATGGC+CGG | - | chr4.2:6430422-6430441 | MS.gene93093:intron | 55.0% |
| ! | GCTCAGGTGACCACTAGTCT+CGG | - | chr4.2:6431113-6431132 | MS.gene93093:CDS | 55.0% |
| ! | GTTCTGGGTGACGTGACTGA+AGG | - | chr4.2:6431797-6431816 | MS.gene93093:CDS | 55.0% |
| ! | GTTTTCCCACTTCCAGGTGG+TGG | + | chr4.2:6431472-6431491 | None:intergenic | 55.0% |
| ! | TGGGTTTTCCCACTTCCAGG+TGG | + | chr4.2:6431475-6431494 | None:intergenic | 55.0% |
| !! | CGGCTCTGAGTGCAACAACA+TGG | + | chr4.2:6432058-6432077 | None:intergenic | 55.0% |
| AAAGCCGTCGGGGAAGGAAG+GGG | + | chr4.2:6430308-6430327 | None:intergenic | 60.0% | |
| ACCGGAGAGAATGACGAGGG+AGG | + | chr4.2:6430257-6430276 | None:intergenic | 60.0% | |
| AGAAAGCCGTCGGGGAAGGA+AGG | + | chr4.2:6430310-6430329 | None:intergenic | 60.0% | |
| CATGCCCACCACCTGGAAGT+GGG | - | chr4.2:6431464-6431483 | MS.gene93093:CDS | 60.0% | |
| CCCTCCCTCGTCATTCTCTC+CGG | - | chr4.2:6430253-6430272 | MS.gene93093:intron | 60.0% | |
| CCGGAGAGAATGACGAGGGA+GGG | + | chr4.2:6430256-6430275 | None:intergenic | 60.0% | |
| CGGAGAGAATGACGAGGGAG+GGG | + | chr4.2:6430255-6430274 | None:intergenic | 60.0% | |
| CTAACTGCAAGACCAGGCCC+AGG | + | chr4.2:6431776-6431795 | None:intergenic | 60.0% | |
| GAAAGCCGTCGGGGAAGGAA+GGG | + | chr4.2:6430309-6430328 | None:intergenic | 60.0% | |
| GAAGGTGACTCATACGCCGG+AGG | - | chr4.2:6430864-6430883 | MS.gene93093:CDS | 60.0% | |
| GACCACCGGAGAGAATGACG+AGG | + | chr4.2:6430261-6430280 | None:intergenic | 60.0% | |
| GACTCATACGCCGGAGGGAA+TGG | - | chr4.2:6430870-6430889 | MS.gene93093:CDS | 60.0% | |
| GATTCCCCTTCCTTCCCCGA+CGG | - | chr4.2:6430301-6430320 | MS.gene93093:intron | 60.0% | |
| GTCGGGGAAGGAAGGGGAAT+CGG | + | chr4.2:6430302-6430321 | None:intergenic | 60.0% | |
| TCATGCCCACCACCTGGAAG+TGG | - | chr4.2:6431463-6431482 | MS.gene93093:CDS | 60.0% | |
| TCCCTCGTCATTCTCTCCGG+TGG | - | chr4.2:6430256-6430275 | MS.gene93093:intron | 60.0% | |
| TCGGGGAAGGAAGGGGAATC+GGG | + | chr4.2:6430301-6430320 | None:intergenic | 60.0% | |
| ! | TCGGGAGTGTGAACGGAGTG+GGG | + | chr4.2:6430283-6430302 | None:intergenic | 60.0% |
| CGCGAACTTCACCGCCGAGA+CGG | + | chr4.2:6430399-6430418 | None:intergenic | 65.0% | |
| CTCGGCGGTGAAGTTCGCGT+TGG | - | chr4.2:6430400-6430419 | MS.gene93093:intron | 65.0% | |
| GCAAGACCAGGCCCAGGGAA+GGG | + | chr4.2:6431770-6431789 | None:intergenic | 65.0% | |
| GGGGTTCTCGATGGCAGCGA+CGG | + | chr4.2:6430590-6430609 | None:intergenic | 65.0% | |
| GTGAACGGAGTGGGGACCAC+CGG | + | chr4.2:6430275-6430294 | None:intergenic | 65.0% | |
| TGCAAGACCAGGCCCAGGGA+AGG | + | chr4.2:6431771-6431790 | None:intergenic | 65.0% | |
| ! | CACGCAGGAGTATGGCCGGA+TGG | - | chr4.2:6430426-6430445 | MS.gene93093:intron | 65.0% |
| CGTCATCCCTTCCCTGGGCC+TGG | - | chr4.2:6431761-6431780 | MS.gene93093:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6430094 | 6432794 | 6430094 | ID=MS.gene93093 |
| chr4.2 | mRNA | 6430094 | 6432794 | 6430094 | ID=MS.gene93093.t1;Parent=MS.gene93093 |
| chr4.2 | exon | 6432243 | 6432794 | 6432243 | ID=MS.gene93093.t1.exon1;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6432243 | 6432794 | 6432243 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| chr4.2 | exon | 6431770 | 6432020 | 6431770 | ID=MS.gene93093.t1.exon2;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6431770 | 6432020 | 6431770 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| chr4.2 | exon | 6431297 | 6431672 | 6431297 | ID=MS.gene93093.t1.exon3;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6431297 | 6431672 | 6431297 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| chr4.2 | exon | 6431044 | 6431175 | 6431044 | ID=MS.gene93093.t1.exon4;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6431044 | 6431175 | 6431044 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| chr4.2 | exon | 6430780 | 6430955 | 6430780 | ID=MS.gene93093.t1.exon5;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6430780 | 6430955 | 6430780 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| chr4.2 | exon | 6430094 | 6430217 | 6430094 | ID=MS.gene93093.t1.exon6;Parent=MS.gene93093.t1 |
| chr4.2 | CDS | 6430094 | 6430217 | 6430094 | ID=cds.MS.gene93093.t1;Parent=MS.gene93093.t1 |
| Gene Sequence |
| Protein sequence |
