AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93591

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93591.t1 MTR_3g026250 97.345 678 18 0 1 678 1 678 0.0 1373
MS.gene93591.t1 MTR_4g112900 27.414 321 192 9 17 297 18 337 9.38e-28 115
MS.gene93591.t1 MTR_4g078290 26.415 318 179 12 29 310 132 430 8.50e-20 94.4
MS.gene93591.t1 MTR_4g078290 26.415 318 179 12 29 310 132 430 8.94e-20 94.4
MS.gene93591.t1 MTR_6g013030 28.511 235 143 9 33 262 116 330 9.63e-20 94.0
MS.gene93591.t1 MTR_3g098760 29.310 232 145 9 33 262 103 317 1.10e-19 93.6
MS.gene93591.t1 MTR_2g085200 29.310 232 145 8 33 262 140 354 4.22e-19 92.4
MS.gene93591.t1 MTR_8g099770 28.017 232 148 8 33 262 96 310 1.07e-18 90.5
MS.gene93591.t1 MTR_2g090405 27.660 235 151 9 33 265 147 364 2.00e-18 90.1
MS.gene93591.t1 MTR_2g020210 29.825 228 141 9 33 258 108 318 4.97e-18 88.2
MS.gene93591.t1 MTR_4g131060 28.114 281 164 13 26 292 17 273 1.51e-17 86.3
MS.gene93591.t1 MTR_7g114300 28.070 228 145 9 33 258 113 323 2.99e-17 85.9
MS.gene93591.t1 MTR_1g081870 28.947 228 143 9 33 258 128 338 4.53e-17 85.5
MS.gene93591.t1 MTR_5g075100 30.282 284 155 13 26 292 22 279 6.95e-17 84.0
MS.gene93591.t1 MTR_8g107000 27.376 263 165 10 33 289 735 977 1.08e-16 85.1
MS.gene93591.t1 MTR_4g109090 25.431 232 154 8 33 262 111 325 1.23e-16 84.3
MS.gene93591.t1 MTR_7g114300 28.017 232 148 9 33 262 113 327 2.11e-16 82.4
MS.gene93591.t1 MTR_8g092290 28.571 224 139 9 33 253 147 352 2.12e-16 83.6
MS.gene93591.t1 MTR_8g024590 27.622 286 158 14 26 292 16 271 3.08e-16 82.0
MS.gene93591.t1 MTR_7g114300 27.155 232 150 8 33 262 113 327 3.35e-16 81.6
MS.gene93591.t1 MTR_7g114300 28.070 228 145 9 33 258 113 323 3.51e-16 82.4
MS.gene93591.t1 MTR_6g079540 26.749 243 155 7 53 289 435 660 3.76e-16 82.8
MS.gene93591.t1 MTR_2g049790 28.523 298 156 15 26 299 22 286 4.26e-16 82.0
MS.gene93591.t1 MTR_1g016300 27.897 233 147 6 65 293 700 915 5.47e-16 82.8
MS.gene93591.t1 MTR_1g081790 26.296 270 171 10 27 289 689 937 9.07e-16 82.0
MS.gene93591.t1 MTR_3g110405 26.744 258 158 11 33 283 43 276 1.07e-15 79.0
MS.gene93591.t1 MTR_6g079540 26.749 243 155 7 53 289 683 908 1.21e-15 81.6
MS.gene93591.t1 MTR_5g008860 24.522 314 183 12 33 310 146 441 1.33e-15 80.9
MS.gene93591.t1 MTR_4g006970 27.682 289 169 11 26 299 19 282 1.99e-15 79.7
MS.gene93591.t1 MTR_1g048630 27.037 270 165 10 26 290 6 248 2.20e-15 80.9
MS.gene93591.t1 MTR_2g016340 27.134 328 197 14 26 339 11 310 2.67e-15 79.3
MS.gene93591.t1 MTR_1g041150 28.889 315 166 18 21 312 110 389 3.06e-15 79.7
MS.gene93591.t1 MTR_1g103760 28.378 296 165 15 31 307 16 283 3.09e-15 79.0
MS.gene93591.t1 MTR_4g019410 28.413 271 151 13 29 283 21 264 3.48e-15 79.7
MS.gene93591.t1 MTR_1g101630 30.769 273 145 15 70 326 86 330 3.94e-15 79.0
MS.gene93591.t1 MTR_3g098070 28.662 314 171 17 38 334 44 321 3.98e-15 79.0
MS.gene93591.t1 MTR_4g118780 27.119 236 145 10 30 258 105 320 4.27e-15 79.3
MS.gene93591.t1 MTR_8g024600 27.273 286 159 14 26 292 16 271 4.35e-15 78.6
MS.gene93591.t1 MTR_3g072320 28.309 272 153 15 31 289 16 258 4.49e-15 78.6
MS.gene93591.t1 MTR_2g105010 28.421 285 172 13 26 299 13 276 5.08e-15 78.6
MS.gene93591.t1 MTR_4g019410 28.413 271 151 13 29 283 21 264 5.27e-15 79.0
MS.gene93591.t1 MTR_3g098070 28.662 314 171 17 38 334 44 321 5.67e-15 77.4
MS.gene93591.t1 MTR_5g075060 27.599 279 158 15 31 292 16 267 6.40e-15 78.2
MS.gene93591.t1 MTR_3g466480 29.181 281 161 13 26 292 20 276 7.35e-15 77.8
MS.gene93591.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 9.16e-15 77.4
MS.gene93591.t1 MTR_1g098300 27.155 232 150 9 33 262 132 346 1.50e-14 77.4
MS.gene93591.t1 MTR_5g066490 27.473 273 168 11 26 289 645 896 3.72e-14 76.6
MS.gene93591.t1 MTR_1g081790 26.754 228 145 7 27 252 689 896 3.90e-14 76.6
MS.gene93591.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 4.05e-14 74.7
MS.gene93591.t1 MTR_1g080020 30.374 214 119 9 77 283 61 251 5.69e-14 73.2
MS.gene93591.t1 MTR_5g088350 27.946 297 153 16 29 299 15 276 9.30e-14 74.3
MS.gene93591.t1 MTR_4g103810 27.311 238 147 9 31 262 222 439 1.68e-13 73.9
MS.gene93591.t1 MTR_5g018050 29.450 309 158 16 33 312 24 301 1.87e-13 72.8
MS.gene93591.t1 MTR_5g017890 23.101 316 196 12 31 330 376 660 2.18e-13 73.9
MS.gene93591.t1 MTR_4g109090 24.870 193 129 6 70 262 1 177 2.61e-13 73.6
MS.gene93591.t1 MTR_4g107490 28.369 282 160 13 24 289 70 325 2.71e-13 73.6
MS.gene93591.t1 MTR_3g040810 25.911 247 148 11 33 262 29 257 2.81e-13 73.2
MS.gene93591.t1 MTR_4g122160 26.692 266 165 11 27 284 460 703 3.63e-13 73.2
MS.gene93591.t1 MTR_5g082700 30.734 218 127 9 26 237 402 601 3.72e-13 73.2
MS.gene93591.t1 MTR_4g103810 27.311 238 147 9 31 262 112 329 3.90e-13 72.4
MS.gene93591.t1 MTR_8g080190 27.119 236 144 10 33 262 391 604 3.92e-13 73.2
MS.gene93591.t1 MTR_7g045510 30.588 255 139 13 32 279 917 1140 6.15e-13 72.8
MS.gene93591.t1 MTR_8g080190 27.119 236 144 10 33 262 391 604 6.31e-13 72.4
MS.gene93591.t1 MTR_5g099240 28.464 267 149 12 33 283 102 342 6.47e-13 72.4
MS.gene93591.t1 MTR_1g076370 26.132 287 165 13 26 292 19 278 8.34e-13 71.2
MS.gene93591.t1 MTR_5g010730 28.522 291 164 12 17 293 415 675 8.66e-13 72.0
MS.gene93591.t1 MTR_3g096230 24.335 263 169 12 31 284 248 489 8.77e-13 71.6
MS.gene93591.t1 MTR_5g099240 28.464 267 149 12 33 283 30 270 9.06e-13 71.6
MS.gene93591.t1 MTR_2g032060 30.213 235 138 11 33 262 10 223 9.07e-13 70.1
MS.gene93591.t1 MTR_3g098090 27.517 298 156 17 38 314 47 305 9.68e-13 71.6
MS.gene93591.t1 MTR_3g096230 24.335 263 169 12 31 284 248 489 1.06e-12 71.6
MS.gene93591.t1 MTR_1g026190 28.369 282 159 14 20 283 72 328 1.07e-12 71.6
MS.gene93591.t1 MTR_2g034020 24.638 276 180 9 27 295 466 720 1.20e-12 71.6
MS.gene93591.t1 MTR_7g039330 30.588 255 139 13 32 279 1015 1238 1.47e-12 71.6
MS.gene93591.t1 MTR_0400s0040 29.956 227 128 13 32 249 885 1089 1.50e-12 71.6
MS.gene93591.t1 MTR_0365s0030 29.956 227 128 13 32 249 885 1089 1.50e-12 71.6
MS.gene93591.t1 MTR_3g085650 27.203 261 157 12 9 262 401 635 1.80e-12 71.2
MS.gene93591.t1 MTR_5g010730 28.522 291 164 12 17 293 470 730 1.85e-12 71.2
MS.gene93591.t1 MTR_3g085650 27.203 261 157 12 9 262 401 635 2.26e-12 70.9
MS.gene93591.t1 MTR_2g072840 23.232 297 183 12 26 310 24 287 2.30e-12 70.5
MS.gene93591.t1 MTR_3g085650 27.203 261 157 12 9 262 401 635 3.06e-12 70.5
MS.gene93591.t1 MTR_4g051648 25.556 270 171 11 29 290 10 257 3.09e-12 70.5
MS.gene93591.t1 MTR_5g064540 27.723 303 159 16 26 303 3 270 3.34e-12 68.9
MS.gene93591.t1 MTR_6g080470 23.978 367 212 14 31 364 18 350 3.58e-12 69.3
MS.gene93591.t1 MTR_3g051770 24.503 302 184 13 5 289 62 336 3.66e-12 69.7
MS.gene93591.t1 MTR_1g054865 27.667 300 163 17 33 312 167 432 4.56e-12 69.7
MS.gene93591.t1 MTR_2g016490 28.326 233 130 11 31 252 44 250 4.74e-12 68.6
MS.gene93591.t1 MTR_5g091680 25.877 228 153 9 29 253 24 238 7.33e-12 68.6
MS.gene93591.t1 MTR_5g091680 25.877 228 153 9 29 253 22 236 7.56e-12 68.6
MS.gene93591.t1 MTR_3g085650 27.203 261 157 12 9 262 401 635 8.71e-12 68.9
MS.gene93591.t1 MTR_5g091680 25.877 228 153 9 29 253 24 238 9.92e-12 68.2
MS.gene93591.t1 MTR_4g132070 28.099 242 128 12 70 292 136 350 1.03e-11 68.2
MS.gene93591.t1 MTR_5g091680 25.877 228 153 9 29 253 24 238 1.13e-11 67.8
MS.gene93591.t1 MTR_6g012980 25.676 296 180 14 13 294 59 328 1.37e-11 67.4
MS.gene93591.t1 MTR_7g106710 28.077 260 137 15 70 312 180 406 1.63e-11 67.8
MS.gene93591.t1 MTR_7g106710 28.077 260 137 15 70 312 180 406 1.67e-11 67.4
MS.gene93591.t1 MTR_5g092815 28.139 231 132 12 70 289 136 343 1.67e-11 67.0
MS.gene93591.t1 MTR_3g100090 25.468 267 169 11 27 284 653 898 1.67e-11 68.2
MS.gene93591.t1 MTR_7g110060 26.201 229 140 11 31 252 79 285 1.76e-11 67.0
MS.gene93591.t1 MTR_2g078740 27.885 208 129 9 31 237 19 206 1.77e-11 67.8
MS.gene93591.t1 MTR_7g106730 26.749 243 142 12 70 298 133 353 1.84e-11 67.0
MS.gene93591.t1 MTR_7g106710 28.077 260 137 15 70 312 180 406 2.00e-11 67.4
MS.gene93591.t1 MTR_7g106710 28.077 260 137 15 70 312 180 406 2.10e-11 67.4
MS.gene93591.t1 MTR_2g083940 26.522 230 138 11 31 252 92 298 2.21e-11 67.0
MS.gene93591.t1 MTR_2g045470 28.082 292 171 16 15 292 10 276 2.22e-11 67.0
MS.gene93591.t1 MTR_1g040545 32.121 165 89 10 81 240 783 929 2.30e-11 67.8
MS.gene93591.t1 MTR_3g099920 24.272 309 177 14 29 308 21 301 2.30e-11 67.0
MS.gene93591.t1 MTR_1g061190 27.016 248 151 10 72 309 599 826 2.43e-11 67.4
MS.gene93591.t1 MTR_4g114670 26.994 326 176 17 26 321 10 303 2.58e-11 66.6
MS.gene93591.t1 MTR_4g114670 26.994 326 176 17 26 321 10 303 2.60e-11 66.2
MS.gene93591.t1 MTR_1g039240 30.263 228 128 13 31 249 884 1089 2.66e-11 67.8
MS.gene93591.t1 MTR_1g039220 30.263 228 126 14 32 249 859 1063 3.11e-11 67.4
MS.gene93591.t1 MTR_1g052530 27.170 265 155 13 33 283 58 298 3.11e-11 66.2
MS.gene93591.t1 MTR_1g052530 27.170 265 155 13 33 283 58 298 3.16e-11 66.6
MS.gene93591.t1 MTR_7g110060 23.411 299 169 13 31 291 79 355 3.22e-11 65.9
MS.gene93591.t1 MTR_4g085810 31.579 209 122 8 32 236 330 521 3.27e-11 67.0
MS.gene93591.t1 MTR_4g086855 28.972 214 110 9 123 312 16 211 3.29e-11 64.7
MS.gene93591.t1 MTR_4g086855 28.205 312 158 16 33 312 29 306 3.30e-11 65.9
MS.gene93591.t1 MTR_2g083940 26.522 230 138 11 31 252 38 244 3.44e-11 65.9
MS.gene93591.t1 MTR_1g034030 27.645 293 154 15 33 301 30 288 3.49e-11 65.9
MS.gene93591.t1 MTR_7g092360 30.108 186 107 8 105 284 91 259 3.60e-11 66.6
MS.gene93591.t1 MTR_2g072840 23.232 297 183 12 26 310 24 287 4.84e-11 66.2
MS.gene93591.t1 MTR_1g096490 26.154 325 183 18 31 334 34 322 4.98e-11 66.2
MS.gene93591.t1 MTR_8g461040 25.620 242 164 9 29 267 28 256 5.27e-11 66.2
MS.gene93591.t1 MTR_8g035890 25.547 274 167 13 33 294 22 270 6.07e-11 64.3
MS.gene93591.t1 MTR_8g089975 27.919 197 108 8 123 303 16 194 9.50e-11 63.5
MS.gene93591.t1 MTR_7g045710 30.556 216 123 11 32 240 798 993 9.74e-11 65.9
MS.gene93591.t1 MTR_5g018050 29.412 272 134 14 70 312 26 268 9.89e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93591.t1 AT2G32850 54.137 713 249 16 1 678 1 670 0.0 689
MS.gene93591.t1 AT2G32850 53.531 708 241 14 1 678 1 650 0.0 682
MS.gene93591.t1 AT5G08160 28.834 326 186 11 17 297 18 342 2.56e-27 114
MS.gene93591.t1 AT5G08160 30.686 277 166 9 46 297 31 306 5.07e-26 109
MS.gene93591.t1 AT1G03740 31.064 235 143 9 33 265 219 436 5.21e-21 98.6
MS.gene93591.t1 AT1G03740 31.064 235 143 9 33 265 219 436 5.51e-21 98.2
MS.gene93591.t1 AT1G53050 28.025 314 172 12 33 310 140 435 4.69e-20 95.5
MS.gene93591.t1 AT1G53050 28.025 314 172 12 33 310 140 435 4.69e-20 95.5
MS.gene93591.t1 AT5G50860 26.752 314 176 13 33 310 120 415 6.35e-20 94.7
MS.gene93591.t1 AT4G10010 28.448 232 147 8 33 262 162 376 1.09e-19 94.0
MS.gene93591.t1 AT5G50860 26.752 314 176 13 33 310 120 415 1.51e-19 92.8
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 5.08e-19 92.0
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 5.08e-19 92.0
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 5.08e-19 92.0
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 5.08e-19 92.0
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 5.08e-19 92.0
MS.gene93591.t1 AT5G58380 28.613 346 197 17 26 352 11 325 7.82e-19 90.5
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 1.02e-18 90.9
MS.gene93591.t1 AT5G44290 30.263 228 140 9 33 258 143 353 1.29e-18 90.1
MS.gene93591.t1 AT1G33770 29.741 232 144 10 33 262 147 361 1.33e-18 90.5
MS.gene93591.t1 AT4G18700 29.682 283 157 15 26 292 25 281 2.45e-18 89.0
MS.gene93591.t1 AT1G54610 28.571 231 140 9 33 258 124 334 9.85e-18 87.8
MS.gene93591.t1 AT1G54610 28.571 231 140 9 33 258 124 334 9.85e-18 87.8
MS.gene93591.t1 AT1G54610 28.571 231 140 9 33 258 124 334 9.85e-18 87.8
MS.gene93591.t1 AT5G45810 29.682 283 157 15 26 292 27 283 1.16e-17 87.0
MS.gene93591.t1 AT5G10930 29.293 297 169 15 26 306 11 282 3.67e-17 85.1
MS.gene93591.t1 AT4G30960 28.620 297 171 15 12 292 8 279 6.82e-17 84.3
MS.gene93591.t1 AT1G30270 29.210 291 161 16 26 298 30 293 9.51e-17 84.0
MS.gene93591.t1 AT4G22940 28.947 228 144 8 33 258 109 320 1.56e-16 84.0
MS.gene93591.t1 AT1G30270 29.210 291 161 16 26 298 30 293 1.72e-16 83.2
MS.gene93591.t1 AT1G12680 33.333 180 95 9 70 247 145 301 1.78e-16 83.2
MS.gene93591.t1 AT5G11850 26.937 271 168 9 27 289 609 857 2.47e-16 83.6
MS.gene93591.t1 AT1G71530 26.724 232 151 9 33 262 153 367 2.47e-16 83.6
MS.gene93591.t1 AT4G22940 28.947 228 144 8 33 258 109 320 6.19e-16 81.3
MS.gene93591.t1 AT2G25880 27.490 251 151 11 33 276 31 257 8.61e-16 79.0
MS.gene93591.t1 AT2G25880 27.778 252 149 12 33 276 44 270 1.86e-15 78.2
MS.gene93591.t1 AT5G39420 27.234 235 148 9 33 263 111 326 2.15e-15 80.5
MS.gene93591.t1 AT3G10660 28.169 284 162 15 33 298 192 451 2.44e-15 80.1
MS.gene93591.t1 AT3G10660 28.169 284 162 15 33 298 192 451 2.44e-15 80.1
MS.gene93591.t1 AT2G30360 29.617 287 152 14 26 291 20 277 2.56e-15 79.3
MS.gene93591.t1 AT1G71530 26.754 228 148 9 33 258 153 363 2.64e-15 79.3
MS.gene93591.t1 AT1G67580 27.848 237 141 12 33 262 412 625 3.83e-15 79.7
MS.gene93591.t1 AT1G67580 27.848 237 141 12 33 262 412 625 3.83e-15 79.7
MS.gene93591.t1 AT5G04870 27.812 320 180 17 33 334 156 442 4.14e-15 79.3
MS.gene93591.t1 AT1G74330 27.119 236 147 10 33 262 127 343 4.55e-15 79.3
MS.gene93591.t1 AT1G74330 27.119 236 147 10 33 262 127 343 4.71e-15 79.3
MS.gene93591.t1 AT1G71530 26.724 232 151 9 33 262 153 367 4.79e-15 78.6
MS.gene93591.t1 AT4G10010 28.061 196 125 7 63 258 13 192 5.32e-15 78.6
MS.gene93591.t1 AT5G35410 30.169 295 152 17 26 299 10 271 5.37e-15 77.8
MS.gene93591.t1 AT1G74330 27.119 236 147 10 33 262 127 343 5.38e-15 79.3
MS.gene93591.t1 AT1G18670 25.431 232 155 8 33 262 137 352 5.63e-15 79.3
MS.gene93591.t1 AT1G01140 29.167 288 161 15 22 292 16 277 6.18e-15 78.2
MS.gene93591.t1 AT1G18670 25.431 232 155 8 33 262 137 352 6.59e-15 79.0
MS.gene93591.t1 AT5G57630 27.523 327 187 16 26 331 11 308 6.67e-15 77.8
MS.gene93591.t1 AT5G57630 27.523 327 187 16 26 331 11 308 7.40e-15 77.8
MS.gene93591.t1 AT1G18670 25.431 232 155 8 33 262 137 352 8.06e-15 78.6
MS.gene93591.t1 AT4G24480 26.866 268 166 12 26 284 668 914 9.51e-15 78.6
MS.gene93591.t1 AT4G32830 26.984 252 151 12 33 276 37 263 1.06e-14 75.9
MS.gene93591.t1 AT2G25880 27.778 252 149 12 33 276 92 318 1.21e-14 76.3
MS.gene93591.t1 AT5G35410 30.169 295 152 17 26 299 10 271 1.24e-14 77.4
MS.gene93591.t1 AT4G24480 26.866 268 166 12 26 284 668 914 1.33e-14 78.2
MS.gene93591.t1 AT1G71530 27.727 220 140 9 33 250 153 355 1.72e-14 76.3
MS.gene93591.t1 AT1G66750 25.000 304 173 12 31 308 17 291 2.09e-14 75.5
MS.gene93591.t1 AT1G01140 27.875 287 164 15 22 292 16 275 2.55e-14 76.3
MS.gene93591.t1 AT3G01085 27.155 232 150 9 33 262 121 335 2.61e-14 77.0
MS.gene93591.t1 AT3G01085 27.155 232 150 9 33 262 121 335 2.65e-14 77.0
MS.gene93591.t1 AT3G01085 27.155 232 150 9 33 262 121 335 2.65e-14 77.0
MS.gene93591.t1 AT1G29230 27.915 283 162 14 26 292 73 329 3.11e-14 76.3
MS.gene93591.t1 AT5G20930 25.926 297 162 12 22 286 404 674 3.47e-14 76.6
MS.gene93591.t1 AT5G49470 25.738 237 153 8 64 295 501 719 3.59e-14 76.6
MS.gene93591.t1 AT5G49470 25.738 237 153 8 64 295 527 745 3.67e-14 76.6
MS.gene93591.t1 AT1G01140 27.875 287 164 15 22 292 16 275 3.73e-14 75.9
MS.gene93591.t1 AT1G08720 25.185 270 174 9 27 289 669 917 3.89e-14 76.6
MS.gene93591.t1 AT1G61950 27.760 317 176 17 3 292 68 358 4.00e-14 76.3
MS.gene93591.t1 AT5G04510 27.863 262 167 10 31 284 48 295 5.04e-14 75.1
MS.gene93591.t1 AT4G24480 26.740 273 165 12 26 284 668 919 5.10e-14 76.3
MS.gene93591.t1 AT5G49470 25.000 236 156 6 64 295 240 458 5.26e-14 75.5
MS.gene93591.t1 AT5G04510 27.481 262 168 10 31 284 48 295 5.55e-14 75.5
MS.gene93591.t1 AT4G23050 25.926 270 172 10 27 289 468 716 6.08e-14 75.9
MS.gene93591.t1 AT4G23050 25.926 270 172 10 27 289 467 715 6.40e-14 75.9
MS.gene93591.t1 AT4G04720 26.974 304 163 16 31 312 84 350 6.78e-14 75.5
MS.gene93591.t1 AT4G04720 26.974 304 163 16 31 312 84 350 6.78e-14 75.5
MS.gene93591.t1 AT5G19450 29.304 273 151 16 33 289 63 309 7.98e-14 75.1
MS.gene93591.t1 AT5G19450 29.304 273 151 16 33 289 63 309 7.98e-14 75.1
MS.gene93591.t1 AT5G49470 25.000 236 156 6 64 295 400 618 8.34e-14 75.5
MS.gene93591.t1 AT5G03730 28.049 246 147 10 14 252 538 760 8.37e-14 75.5
MS.gene93591.t1 AT5G03730 28.049 246 147 10 14 252 538 760 8.37e-14 75.5
MS.gene93591.t1 AT3G06630 27.273 231 144 8 27 254 434 643 8.50e-14 75.5
MS.gene93591.t1 AT3G06630 27.273 231 144 8 27 254 434 643 8.77e-14 75.5
MS.gene93591.t1 AT1G73660 25.926 270 174 10 26 289 747 996 8.82e-14 75.5
MS.gene93591.t1 AT1G63700 23.792 269 173 12 31 289 404 650 1.25e-13 75.1
MS.gene93591.t1 AT1G63700 23.792 269 173 12 31 289 404 650 1.25e-13 75.1
MS.gene93591.t1 AT1G67890 26.582 237 150 8 64 295 523 740 1.42e-13 74.7
MS.gene93591.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.46e-13 74.7
MS.gene93591.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.46e-13 74.7
MS.gene93591.t1 AT3G06630 27.632 228 141 8 27 251 434 640 1.46e-13 74.7
MS.gene93591.t1 AT3G06630 27.632 228 141 8 27 251 350 556 1.57e-13 74.3
MS.gene93591.t1 AT1G18160 25.926 270 174 10 26 289 714 963 1.82e-13 74.7
MS.gene93591.t1 AT4G10390 27.391 230 151 9 21 246 35 252 1.99e-13 72.8
MS.gene93591.t1 AT1G35670 27.607 326 177 18 31 334 30 318 2.54e-13 73.6
MS.gene93591.t1 AT2G17890 26.518 313 178 17 17 301 93 381 3.64e-13 73.2
MS.gene93591.t1 AT4G21940 24.545 330 196 14 4 314 79 374 4.15e-13 72.8
MS.gene93591.t1 AT1G67890 28.571 189 117 5 64 252 523 693 4.63e-13 73.2
MS.gene93591.t1 AT1G67890 28.571 189 117 5 64 252 523 693 4.63e-13 73.2
MS.gene93591.t1 AT1G09600 27.155 232 150 9 33 262 169 383 4.89e-13 72.8
MS.gene93591.t1 AT2G26980 26.087 299 162 14 26 299 13 277 6.23e-13 72.0
MS.gene93591.t1 AT4G04710 26.740 273 156 12 33 289 42 286 6.47e-13 72.0
MS.gene93591.t1 AT3G07980 26.354 277 160 13 33 292 26 275 6.51e-13 72.8
MS.gene93591.t1 AT5G12180 25.846 325 200 16 17 323 63 364 6.87e-13 72.0
MS.gene93591.t1 AT4G21940 24.545 330 196 14 4 314 79 374 6.89e-13 72.0
MS.gene93591.t1 AT2G26980 26.087 299 162 14 26 299 13 277 7.03e-13 71.2
MS.gene93591.t1 AT2G30980 27.897 233 131 11 31 252 76 282 7.39e-13 71.6
MS.gene93591.t1 AT5G10270 25.105 239 142 11 33 253 32 251 7.41e-13 72.0
MS.gene93591.t1 AT5G12480 26.950 282 164 13 24 289 56 311 7.75e-13 72.0
MS.gene93591.t1 AT4G21940 24.545 330 196 14 4 314 79 374 7.89e-13 72.0
MS.gene93591.t1 AT3G44200 26.217 267 165 12 33 290 14 257 8.24e-13 72.4
MS.gene93591.t1 AT3G44200 26.217 267 165 12 33 290 14 257 8.24e-13 72.4
MS.gene93591.t1 AT2G26980 26.087 299 162 14 26 299 23 287 8.29e-13 71.6
MS.gene93591.t1 AT3G07980 26.354 277 160 13 33 292 26 275 8.30e-13 72.8
MS.gene93591.t1 AT2G37840 27.138 269 157 12 29 283 14 257 9.34e-13 72.0
MS.gene93591.t1 AT1G67890 28.571 189 117 5 64 252 395 565 1.20e-12 71.6
MS.gene93591.t1 AT5G66850 23.616 271 176 10 31 289 350 601 1.20e-12 71.6
MS.gene93591.t1 AT4G38230 28.986 276 153 16 30 289 58 306 1.30e-12 71.2
MS.gene93591.t1 AT5G19360 26.367 311 188 16 31 323 72 359 1.54e-12 70.9
MS.gene93591.t1 AT5G66850 23.616 271 176 10 31 289 350 601 1.66e-12 71.2
MS.gene93591.t1 AT1G53510 25.751 233 151 11 26 252 24 240 1.74e-12 70.9
MS.gene93591.t1 AT3G20410 27.465 284 156 14 31 292 95 350 2.15e-12 70.5
MS.gene93591.t1 AT3G20410 27.465 284 156 14 31 292 95 350 2.15e-12 70.5
MS.gene93591.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.16e-12 70.9
MS.gene93591.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.16e-12 70.9
MS.gene93591.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.16e-12 70.9
MS.gene93591.t1 AT5G21222 28.276 290 153 14 26 292 12 269 2.16e-12 70.9
MS.gene93591.t1 AT1G50700 26.923 286 159 14 29 292 75 332 2.22e-12 70.5
MS.gene93591.t1 AT3G10540 27.481 262 168 10 31 284 49 296 2.33e-12 70.5
MS.gene93591.t1 AT5G64960 25.000 244 146 11 33 258 32 256 2.39e-12 70.5
MS.gene93591.t1 AT4G38230 28.986 276 153 16 30 289 28 276 2.42e-12 70.1
MS.gene93591.t1 AT4G38230 28.986 276 153 16 30 289 28 276 2.42e-12 70.1
MS.gene93591.t1 AT1G08720 25.439 228 148 6 27 252 669 876 2.56e-12 70.9
MS.gene93591.t1 AT4G09570 28.413 271 148 14 31 283 29 271 2.94e-12 70.1
MS.gene93591.t1 AT5G21326 26.780 295 155 15 26 294 12 271 3.00e-12 69.7
MS.gene93591.t1 AT1G50240 28.037 214 124 9 28 236 7 195 3.22e-12 70.9
MS.gene93591.t1 AT1G50240 28.037 214 124 9 28 236 7 195 3.22e-12 70.9
MS.gene93591.t1 AT2G41860 27.037 270 161 12 33 289 60 306 3.52e-12 69.7
MS.gene93591.t1 AT2G26980 26.087 299 162 14 26 299 13 277 3.67e-12 69.3
MS.gene93591.t1 AT1G50700 26.923 286 159 14 29 292 75 332 3.97e-12 69.7
MS.gene93591.t1 AT2G45490 27.509 269 154 13 33 289 28 267 4.37e-12 67.8
MS.gene93591.t1 AT5G07070 28.723 282 161 14 26 292 11 267 4.86e-12 69.3
MS.gene93591.t1 AT3G13530 25.000 276 165 14 33 292 26 275 6.55e-12 69.7
MS.gene93591.t1 AT5G49470 27.128 188 120 5 64 251 527 697 6.63e-12 69.3
MS.gene93591.t1 AT2G38910 27.302 315 175 17 8 294 107 395 8.17e-12 68.9
MS.gene93591.t1 AT2G41860 26.667 270 162 12 33 289 60 306 8.27e-12 68.6
MS.gene93591.t1 AT4G04700 29.577 284 151 14 43 300 41 301 8.50e-12 68.6
MS.gene93591.t1 AT3G57530 28.358 268 154 13 33 287 69 311 8.77e-12 68.6
MS.gene93591.t1 AT3G57530 28.358 268 154 13 33 287 69 311 8.86e-12 68.2
MS.gene93591.t1 AT1G50700 26.923 286 159 14 29 292 75 332 1.01e-11 68.6
MS.gene93591.t1 AT1G78290 27.852 298 161 14 26 301 3 268 1.07e-11 67.4
MS.gene93591.t1 AT1G78290 27.852 298 161 14 26 301 3 268 1.07e-11 67.4
MS.gene93591.t1 AT5G14640 27.753 227 139 10 31 252 78 284 1.09e-11 67.8
MS.gene93591.t1 AT5G14640 27.753 227 139 10 31 252 78 284 1.09e-11 67.8
MS.gene93591.t1 AT5G39440 27.148 291 161 15 29 301 21 278 1.21e-11 68.2
MS.gene93591.t1 AT1G73670 24.242 231 159 9 26 253 89 306 1.24e-11 68.2
MS.gene93591.t1 AT1G18890 29.130 230 131 11 70 289 108 315 1.31e-11 68.2
MS.gene93591.t1 AT1G76040 27.240 279 162 14 20 283 106 358 1.36e-11 68.2
MS.gene93591.t1 AT4G04710 27.273 253 151 11 42 283 36 266 1.38e-11 67.8
MS.gene93591.t1 AT1G76040 27.240 279 162 14 20 283 106 358 1.40e-11 67.8
MS.gene93591.t1 AT1G02970 25.954 262 164 13 27 284 249 484 1.46e-11 67.8
MS.gene93591.t1 AT3G53930 26.119 268 161 11 29 283 22 265 2.34e-11 67.4
MS.gene93591.t1 AT3G53930 26.119 268 161 11 29 283 22 265 2.34e-11 67.4
MS.gene93591.t1 AT4G04710 29.577 213 116 12 33 234 42 231 2.45e-11 67.0
MS.gene93591.t1 AT2G31500 28.163 245 136 14 70 298 111 331 2.52e-11 67.4
MS.gene93591.t1 AT4G04710 29.577 213 116 12 33 234 42 231 2.57e-11 67.0
MS.gene93591.t1 AT5G60550 27.059 255 157 12 42 289 132 364 2.74e-11 66.6
MS.gene93591.t1 AT5G18700 29.577 213 123 11 28 238 5 192 2.82e-11 67.8
MS.gene93591.t1 AT5G23580 27.554 323 181 18 31 334 26 314 2.87e-11 67.0
MS.gene93591.t1 AT1G08650 28.829 222 130 9 62 277 52 251 3.02e-11 65.1
MS.gene93591.t1 AT2G26980 27.966 236 121 11 26 244 13 216 3.12e-11 65.1
MS.gene93591.t1 AT4G33950 28.378 296 154 14 31 302 25 286 3.14e-11 65.9
MS.gene93591.t1 AT2G40120 28.755 233 142 9 26 252 260 474 3.50e-11 66.6
MS.gene93591.t1 AT4G33950 28.378 296 154 14 31 302 25 286 3.53e-11 65.9
MS.gene93591.t1 AT1G08650 28.829 222 130 9 62 277 52 251 3.85e-11 64.7
MS.gene93591.t1 AT2G17290 27.715 267 151 14 33 283 91 331 4.74e-11 66.2
MS.gene93591.t1 AT2G17290 27.715 267 151 14 33 283 91 331 4.74e-11 66.2
MS.gene93591.t1 AT3G61960 28.253 269 147 15 33 283 16 256 6.06e-11 66.2
MS.gene93591.t1 AT1G06390 27.039 233 133 11 31 252 74 280 6.24e-11 65.5
MS.gene93591.t1 AT1G06390 27.039 233 133 11 31 252 74 280 6.24e-11 65.5
MS.gene93591.t1 AT3G61960 27.070 314 171 17 33 328 16 289 8.06e-11 65.5

Find 164 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGGTTCAGATGGTTTA+TGG 0.203921 3.4:-19095893 MS.gene93591:CDS
TCTCGTTAATGACTTCTTTC+AGG 0.204309 3.4:+19095438 None:intergenic
TCCTCAATTCCCATTTCTTC+TGG 0.218532 3.4:+19095819 None:intergenic
TGCTAATGCCATCTATGATA+TGG 0.225693 3.4:-19096280 MS.gene93591:CDS
CTCAAAACGTTTGTGATTTG+TGG 0.254929 3.4:+19095845 None:intergenic
TCAAAGCTTCAAGTCTTAAA+TGG 0.259098 3.4:-19095243 MS.gene93591:CDS
GTGAGGGTTGAATTGAATTT+AGG 0.277218 3.4:+19095198 None:intergenic
TTGTTGGAAGCAGGCGATTC+AGG 0.277556 3.4:+19094921 None:intergenic
CTCAGCCATCTCTTGCTTCT+AGG 0.282557 3.4:-19094617 MS.gene93591:CDS
AGTTGCATCATCTGCATCTT+TGG 0.294484 3.4:-19093983 MS.gene93591:intron
TTATGGAAGTTGTGTGATTT+TGG 0.299194 3.4:-19095876 MS.gene93591:CDS
AGATGGCTGAGGGGTAGTTT+TGG 0.319968 3.4:+19094629 None:intergenic
GCTTCTAGGGGAGGGGAAAG+TGG 0.324528 3.4:-19094603 MS.gene93591:CDS
TCCTTGGAAGATGCAGCTTC+AGG 0.349436 3.4:+19094369 None:intergenic
TGTCCTACCCATATCATAGA+TGG 0.364922 3.4:+19096272 None:intergenic
TTCACAAAGGCAAGAATTGC+AGG 0.365622 3.4:-19094073 MS.gene93591:CDS
TTACTCCCTTCACCAGGTCT+TGG 0.369187 3.4:+19093596 None:intergenic
GCATGAAGTGTGACAACATT+AGG 0.371714 3.4:+19096300 None:intergenic
TGCCTCACCTTCATGATTGT+TGG 0.372227 3.4:+19094905 None:intergenic
TGAGAAGCAAATGTCAAATC+TGG 0.375656 3.4:-19094307 MS.gene93591:CDS
GTCATCATGGCAACCTTTCC+CGG 0.375838 3.4:-19093792 MS.gene93591:CDS
TCATTTGCATGACCTTTATC+CGG 0.386573 3.4:+19094327 None:intergenic
TTCTAGGGGAGGGGAAAGTG+GGG 0.388161 3.4:-19094601 MS.gene93591:CDS
AAAATTTATTTCAAAGTCCT+TGG 0.392136 3.4:+19094353 None:intergenic
CTTCTAGGGGAGGGGAAAGT+GGG 0.392824 3.4:-19094602 MS.gene93591:CDS
TCAGCCATCTCTTGCTTCTA+GGG 0.393788 3.4:-19094616 MS.gene93591:CDS
TATTGTTACCGGTGAGCAAT+AGG 0.394447 3.4:+19096099 None:intergenic
GCGCTTGCCTGCGTGATATC+TGG 0.397065 3.4:+19095132 None:intergenic
TTCACATGTCCCTGAGGAAA+AGG 0.402612 3.4:-19094538 MS.gene93591:CDS
AAAAGAGGCTTTCCTTGTAA+TGG 0.404156 3.4:-19096250 MS.gene93591:CDS
GAAAGCAGAAAATCTTCTGT+TGG 0.404923 3.4:-19095910 MS.gene93591:CDS
GATGACTTTGGTTCTGAACT+AGG 0.405933 3.4:+19093809 None:intergenic
CTCTAATGCTTCTTCCCTTG+TGG 0.415054 3.4:+19094191 None:intergenic
GGTCGTTCTTCATCATATAC+AGG 0.418881 3.4:+19094510 None:intergenic
AAAGCAGAAAATCTTCTGTT+GGG 0.419192 3.4:-19095909 MS.gene93591:CDS
GGCGATTCAGGAGGCCTGTC+AGG 0.427579 3.4:+19094933 None:intergenic
GAATTGAATTTAGGTAGATC+AGG 0.428286 3.4:+19095207 None:intergenic
TCTCAACCTGCTGGATGGGC+TGG 0.429734 3.4:-19093527 MS.gene93591:CDS
AAAGAGCAAAATGGTCTTGA+AGG 0.434157 3.4:-19096522 MS.gene93591:CDS
AACTTCTCAACCTGCTGGAT+GGG 0.434510 3.4:-19093531 MS.gene93591:CDS
TACTTCAAAAGTGCATTTGA+TGG 0.435264 3.4:-19095270 MS.gene93591:CDS
TCAGCAGCCGGTTGAATAGC+TGG 0.442862 3.4:+19093689 None:intergenic
ATAATGCTTCAAAATCTGTT+AGG 0.445607 3.4:-19093736 MS.gene93591:CDS
CATTGGACTTGATTTGTTTG+TGG 0.451833 3.4:+19094692 None:intergenic
TTCGGTAACTGATCATTGTC+CGG 0.451844 3.4:+19094468 None:intergenic
CTAGGGGAGGGGAAAGTGGG+GGG 0.452693 3.4:-19094599 MS.gene93591:CDS
TTAACGAGAAAGTGGACATA+TGG 0.456136 3.4:-19095424 MS.gene93591:CDS
TGAAGCATTATCTGCTGAAA+GGG 0.457877 3.4:+19093748 None:intergenic
GGTGGATTTCTGCGAGGCAT+TGG 0.459471 3.4:+19094675 None:intergenic
TCTAGGGGAGGGGAAAGTGG+GGG 0.462585 3.4:-19094600 MS.gene93591:CDS
TCACCAGGTCTTGGCATCTG+TGG 0.464964 3.4:+19093605 None:intergenic
CATTTGCATGACCTTTATCC+GGG 0.470456 3.4:+19094328 None:intergenic
TCTGCTGAAAGGGATTTAAA+CGG 0.473651 3.4:+19093758 None:intergenic
CTCCTTCAGCAATGAGCTTG+TGG 0.476954 3.4:+19096463 None:intergenic
AGGGTTCTCATGTGTCTACT+TGG 0.477773 3.4:-19096442 MS.gene93591:CDS
TGTGGATTTGTTACCATGCC+CGG 0.478497 3.4:+19094209 None:intergenic
GTTCTGAAACCCTCTCTACT+TGG 0.479928 3.4:+19094015 None:intergenic
TTTGAGAAGCCAGAAGAAAT+GGG 0.479994 3.4:-19095828 MS.gene93591:CDS
CCTTCATGATTGTTGGAAGC+AGG 0.480225 3.4:+19094912 None:intergenic
AAAGGTTGCCATGATGACTT+TGG 0.480370 3.4:+19093797 None:intergenic
GCTAATGCCATCTATGATAT+GGG 0.480952 3.4:-19096279 MS.gene93591:CDS
AAATCTGTTAGGTCAAGAAA+TGG 0.487218 3.4:-19093725 MS.gene93591:CDS
GGTGAGCAATAGGCGGGGAC+TGG 0.487744 3.4:+19096109 None:intergenic
GAGGGTTTCAGAACCTCTCC+TGG 0.493651 3.4:-19094006 MS.gene93591:CDS
TCTTGGCATCTGTGGGCTAC+CGG 0.494475 3.4:+19093613 None:intergenic
CACCAGGTCTTGGCATCTGT+GGG 0.494706 3.4:+19093606 None:intergenic
TTCGCACATAAAGAGCAAAA+TGG 0.498865 3.4:-19096531 MS.gene93591:CDS
CAACAAAAGTGTTAAAAGAC+TGG 0.499295 3.4:+19094259 None:intergenic
GAAGTCTCTGGTTAGTGTGC+TGG 0.501371 3.4:-19096217 MS.gene93591:CDS
AGAAGTCATTAACGAGAAAG+TGG 0.501594 3.4:-19095432 MS.gene93591:CDS
CAACTTCTCAACCTGCTGGA+TGG 0.504337 3.4:-19093532 MS.gene93591:CDS
ACTTCAAAAGTGCATTTGAT+GGG 0.504771 3.4:-19095269 MS.gene93591:CDS
CCATCTCTTGCTTCTAGGGG+AGG 0.505410 3.4:-19094612 MS.gene93591:CDS
GCCAGAAGAAATGGGAATTG+AGG 0.505993 3.4:-19095820 MS.gene93591:CDS
GCAACCGATGGAGGAGGAGG+TGG 0.506062 3.4:+19094657 None:intergenic
AATCTTCTGTTGGGTTCAGA+TGG 0.506304 3.4:-19095900 MS.gene93591:CDS
GAACAAGCCAGCTATTCAAC+CGG 0.507213 3.4:-19093696 MS.gene93591:CDS
ATCACTTGGATTAGTGAAGA+AGG 0.508156 3.4:-19096355 MS.gene93591:CDS
TTAAACGGTTCAGTTTCCTC+CGG 0.508988 3.4:+19093773 None:intergenic
GTGATATCTGGTCTGTCGTC+TGG 0.509677 3.4:+19095144 None:intergenic
GCTTGAATATGTTAGGCACT+TGG 0.511385 3.4:-19095315 MS.gene93591:intron
ATCTCTTGCTTCTAGGGGAG+GGG 0.513102 3.4:-19094610 MS.gene93591:CDS
GTGCTGGAGAGTCGCGGTGC+TGG 0.514896 3.4:-19096201 MS.gene93591:CDS
ACATTTAGTGCTGCCCGTGC+TGG 0.514975 3.4:-19093638 MS.gene93591:CDS
TCTCACAAAATTCCATTACA+AGG 0.516776 3.4:+19096238 None:intergenic
TCTGCAACCGATGGAGGAGG+AGG 0.520741 3.4:+19094654 None:intergenic
TACAAAAGTCATTACCTGAC+AGG 0.520744 3.4:-19094947 MS.gene93591:CDS
CTGGTCCACTCTGCATGCAA+AGG 0.520841 3.4:-19094562 MS.gene93591:CDS
CATTGTCCGGACGAACTTTG+TGG 0.523612 3.4:+19094481 None:intergenic
GGACGAACTTTGTGGTGGCT+AGG 0.523635 3.4:+19094489 None:intergenic
TAACGAGAAAGTGGACATAT+GGG 0.523790 3.4:-19095423 MS.gene93591:intron
TTGAAGCATTATCTGCTGAA+AGG 0.524348 3.4:+19093747 None:intergenic
CTTGAATATGTTAGGCACTT+GGG 0.524452 3.4:-19095314 MS.gene93591:intron
GATGCAGATGATGCAACTCC+AGG 0.526421 3.4:+19093988 None:intergenic
AGTGCTGCCCGTGCTGGTAC+CGG 0.526607 3.4:-19093632 MS.gene93591:CDS
GCAATTCTTGCCTTTGTGAA+CGG 0.527486 3.4:+19094076 None:intergenic
TTGTGTGTTAGCCACTTTGT+TGG 0.528225 3.4:+19094434 None:intergenic
CACAAGCTCATTGCTGAAGG+AGG 0.535951 3.4:-19096462 MS.gene93591:CDS
TGGGCTACCGGTACCAGCAC+GGG 0.536399 3.4:+19093625 None:intergenic
AAATCAACTTCTCAACCTGC+TGG 0.537132 3.4:-19093536 MS.gene93591:CDS
GGTTCAGTTTCCTCCGGGAA+AGG 0.537560 3.4:+19093779 None:intergenic
TAAACGGTTCAGTTTCCTCC+GGG 0.540203 3.4:+19093774 None:intergenic
GGTTCTGCAACCGATGGAGG+AGG 0.541622 3.4:+19094651 None:intergenic
TAGCCACCACAAAGTTCGTC+CGG 0.541787 3.4:-19094487 MS.gene93591:CDS
GTCTCTGATCAAGTCTGTGA+GGG 0.546497 3.4:+19095182 None:intergenic
TCACATGTCCCTGAGGAAAA+GGG 0.548476 3.4:-19094537 MS.gene93591:CDS
CATCTCTTGCTTCTAGGGGA+GGG 0.550662 3.4:-19094611 MS.gene93591:CDS
TTCAGCAGGATAGAAGTGAA+TGG 0.556055 3.4:-19093838 MS.gene93591:intron
AAATCCACCTCCTCCTCCAT+CGG 0.556241 3.4:-19094661 MS.gene93591:CDS
AAACCCTCTCTACTTGGAGA+TGG 0.558781 3.4:+19094021 None:intergenic
GGAAGAAGCATTAGAGTCTG+AGG 0.566940 3.4:-19094184 MS.gene93591:CDS
CAGCCATCTCTTGCTTCTAG+GGG 0.571997 3.4:-19094615 MS.gene93591:CDS
ACCTGAAGCTGCATCTTCCA+AGG 0.572909 3.4:-19094370 MS.gene93591:CDS
ATGCCCGGAGTTTAGCTTAG+CGG 0.573826 3.4:+19094224 None:intergenic
TTGGGTTCTGCAACCGATGG+AGG 0.574182 3.4:+19094648 None:intergenic
AGAAGCATTAGAGTCTGAGG+TGG 0.576012 3.4:-19094181 MS.gene93591:CDS
CAAGAATCAAAATCAGCAGC+CGG 0.576908 3.4:+19093677 None:intergenic
GTCCACAAGCTCATTGCTGA+AGG 0.577847 3.4:-19096465 MS.gene93591:CDS
AGCCCACAGATGCCAAGACC+TGG 0.579173 3.4:-19093608 MS.gene93591:CDS
GTTCAGAACCAAAGTCATCA+TGG 0.583479 3.4:-19093805 MS.gene93591:CDS
AGGCGGGGACTGGCAGTGCA+TGG 0.583770 3.4:+19096119 None:intergenic
GTTACCGGTGAGCAATAGGC+GGG 0.585891 3.4:+19096103 None:intergenic
AACTCCATCTCCAAGTAGAG+AGG 0.590543 3.4:-19094025 MS.gene93591:CDS
TGATATGGGTAGGACAAAAG+AGG 0.591244 3.4:-19096265 MS.gene93591:CDS
TGCAACGATGAAGAATCACT+TGG 0.592691 3.4:-19096369 MS.gene93591:CDS
GAAACTCAGAGAGCAGCTGA+AGG 0.593651 3.4:-19094157 MS.gene93591:CDS
ACTCCATCTCCAAGTAGAGA+GGG 0.594417 3.4:-19094024 MS.gene93591:CDS
CCTGCTTCCAACAATCATGA+AGG 0.601007 3.4:-19094912 MS.gene93591:intron
CTTCAAAAGTGCATTTGATG+GGG 0.602309 3.4:-19095268 MS.gene93591:CDS
ATACCGCTAAGCTAAACTCC+GGG 0.605101 3.4:-19094227 MS.gene93591:CDS
GCTAAGCTAAACTCCGGGCA+TGG 0.605785 3.4:-19094222 MS.gene93591:CDS
ATGCCATCTATGATATGGGT+AGG 0.605844 3.4:-19096275 MS.gene93591:CDS
CTAGAAGCAAGAGATGGCTG+AGG 0.611264 3.4:+19094618 None:intergenic
GTGGGCTACCGGTACCAGCA+CGG 0.612967 3.4:+19093624 None:intergenic
AAATGTTAGTACCAACAAAG+TGG 0.615394 3.4:-19094445 MS.gene93591:CDS
CAGATGCCAAGACCTGGTGA+AGG 0.617032 3.4:-19093602 MS.gene93591:CDS
TGAGCTTTACTCCCTTCACC+AGG 0.617573 3.4:+19093590 None:intergenic
GAAGGTCGTTCTATAGACGT+TGG 0.619556 3.4:-19096504 MS.gene93591:CDS
TCTGTGATGAAGTTGTTGAT+AGG 0.619920 3.4:-19096327 MS.gene93591:CDS
TAGAAGCAAGAGATGGCTGA+GGG 0.620956 3.4:+19094619 None:intergenic
AGTCCCCGCCTATTGCTCAC+CGG 0.621278 3.4:-19096107 MS.gene93591:intron
AGATGCCAAGACCTGGTGAA+GGG 0.622291 3.4:-19093601 MS.gene93591:CDS
ACAAGCTCATTGCTGAAGGA+GGG 0.624219 3.4:-19096461 MS.gene93591:CDS
CTGCTATCTGCCGTTCACAA+AGG 0.626119 3.4:-19094086 MS.gene93591:CDS
GATACCGCTAAGCTAAACTC+CGG 0.627950 3.4:-19094228 MS.gene93591:CDS
TTGGAAGCAGGCGATTCAGG+AGG 0.633455 3.4:+19094924 None:intergenic
CCTCCCCTAGAAGCAAGAGA+TGG 0.644007 3.4:+19094612 None:intergenic
GGCATGGTAACAAATCCACA+AGG 0.644452 3.4:-19094206 MS.gene93591:CDS
AAATCTCAACATACCTCGGG+GGG 0.649501 3.4:+19095759 None:intergenic
TGTCTCTGATCAAGTCTGTG+AGG 0.652702 3.4:+19095181 None:intergenic
TGTCCGGACGAACTTTGTGG+TGG 0.655974 3.4:+19094484 None:intergenic
TGTTACCGGTGAGCAATAGG+CGG 0.666278 3.4:+19096102 None:intergenic
AGATGATGCAACTCCAGGAG+AGG 0.670074 3.4:+19093993 None:intergenic
AGAAGCAAGAGATGGCTGAG+GGG 0.671373 3.4:+19094620 None:intergenic
GTTAGTGTGCTGGAGAGTCG+CGG 0.693187 3.4:-19096207 MS.gene93591:CDS
TTACCGGTGAGCAATAGGCG+GGG 0.700415 3.4:+19096104 None:intergenic
CAAATCTCAACATACCTCGG+GGG 0.702329 3.4:+19095758 None:intergenic
ATTTAGGTAGATCAGGAATG+CGG 0.706113 3.4:+19095214 None:intergenic
CGACAGACCAGATATCACGC+AGG 0.713771 3.4:-19095139 MS.gene93591:intron
TGAATCCTTTGCATGCAGAG+TGG 0.714496 3.4:+19094557 None:intergenic
AAAGGATTCACATGTCCCTG+AGG 0.725168 3.4:-19094544 MS.gene93591:CDS
GGAGGAGGTGGATTTCTGCG+AGG 0.732203 3.4:+19094669 None:intergenic
GCATGGTAACAAATCCACAA+GGG 0.737909 3.4:-19094205 MS.gene93591:CDS
ATCATGGCAACCTTTCCCGG+AGG 0.754772 3.4:-19093789 MS.gene93591:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTACAATTTATTTTTTTAA+TGG + chr3.4:19094536-19094555 None:intergenic 10.0%
!!! CTACAATTTATTTTTTTAAT+GGG + chr3.4:19094535-19094554 None:intergenic 10.0%
!!! TGTTTTTTCTATATAAATTA+AGG - chr3.4:19094332-19094351 MS.gene93591:CDS 10.0%
!! AAAATTTATTTCAAAGTCCT+TGG + chr3.4:19095719-19095738 None:intergenic 20.0%
!! CATGCAAATACAAATTATTT+GGG + chr3.4:19096138-19096157 None:intergenic 20.0%
!! TACAATTACAAATGAATGAA+TGG - chr3.4:19094565-19094584 MS.gene93591:CDS 20.0%
!! TACTAGTGATTCTTTAAATA+TGG - chr3.4:19093991-19094010 MS.gene93591:CDS 20.0%
!! TCATGCAAATACAAATTATT+TGG + chr3.4:19096139-19096158 None:intergenic 20.0%
!!! AATGACTTTTGTAAATCAAT+GGG + chr3.4:19095115-19095134 None:intergenic 20.0%
!!! ATTTGTAGCTAAATTTTTGT+AGG - chr3.4:19095343-19095362 MS.gene93591:intron 20.0%
!!! CTTTGAAATAAATTTTTTCC+CGG - chr3.4:19095723-19095742 MS.gene93591:intron 20.0%
!!! TAATGACTTTTGTAAATCAA+TGG + chr3.4:19095116-19095135 None:intergenic 20.0%
! AAAAACTCTTGGTAGAATAT+TGG - chr3.4:19095277-19095296 MS.gene93591:CDS 25.0%
! ATAATGCTTCAAAATCTGTT+AGG - chr3.4:19096333-19096352 MS.gene93591:CDS 25.0%
! GTTACAAAGAAATCACAATT+AGG + chr3.4:19096211-19096230 None:intergenic 25.0%
! TAATCTTTCTGTCTGATATT+AGG + chr3.4:19095323-19095342 None:intergenic 25.0%
! TATTACTGCTTGAATATGTT+AGG - chr3.4:19094747-19094766 MS.gene93591:intron 25.0%
!! TTGCAATAAAGAGATGTTTT+AGG + chr3.4:19094688-19094707 None:intergenic 25.0%
!! TTGTTGGTACTAACATTTTT+CGG + chr3.4:19095622-19095641 None:intergenic 25.0%
!!! ATAAATTTTTTCCCGGATAA+AGG - chr3.4:19095730-19095749 MS.gene93591:intron 25.0%
!!! TTTTAATGGGCACAAAAAAT+GGG + chr3.4:19094522-19094541 None:intergenic 25.0%
!!! TTTTTAATGGGCACAAAAAA+TGG + chr3.4:19094523-19094542 None:intergenic 25.0%
AAACAAATCTCAACATACCT+CGG + chr3.4:19094317-19094336 None:intergenic 30.0%
AAAGCAGAAAATCTTCTGTT+GGG - chr3.4:19094160-19094179 MS.gene93591:CDS 30.0%
AAATCTGTTAGGTCAAGAAA+TGG - chr3.4:19096344-19096363 MS.gene93591:CDS 30.0%
AAATGTTAGTACCAACAAAG+TGG - chr3.4:19095624-19095643 MS.gene93591:intron 30.0%
AGAATCACTAGTATTGTTAC+CGG + chr3.4:19093984-19094003 None:intergenic 30.0%
AGCAATCAATCACTGATATT+GGG - chr3.4:19095043-19095062 MS.gene93591:intron 30.0%
CGCAAAAACAAAGTAAAATC+AGG + chr3.4:19094043-19094062 None:intergenic 30.0%
GAATTGAATTTAGGTAGATC+AGG + chr3.4:19094865-19094884 None:intergenic 30.0%
GCAAATACAAATTATTTGGG+AGG + chr3.4:19096135-19096154 None:intergenic 30.0%
TCAAAGCTTCAAGTCTTAAA+TGG - chr3.4:19094826-19094845 MS.gene93591:intron 30.0%
TCTCACAAAATTCCATTACA+AGG + chr3.4:19093834-19093853 None:intergenic 30.0%
TTTACCCTTGAAGTGAATTA+GGG - chr3.4:19095246-19095265 MS.gene93591:CDS 30.0%
! ACTTCAAAAGTGCATTTGAT+GGG - chr3.4:19094800-19094819 MS.gene93591:intron 30.0%
! TACTTCAAAAGTGCATTTGA+TGG - chr3.4:19094799-19094818 MS.gene93591:intron 30.0%
! TTATGGAAGTTGTGTGATTT+TGG - chr3.4:19094193-19094212 MS.gene93591:CDS 30.0%
! TTTTACCCTTGAAGTGAATT+AGG - chr3.4:19095245-19095264 MS.gene93591:CDS 30.0%
! TTTTGTGTGCATTTAGATGT+GGG - chr3.4:19094601-19094620 MS.gene93591:CDS 30.0%
!! CAACAAAAGTGTTAAAAGAC+TGG + chr3.4:19095813-19095832 None:intergenic 30.0%
!! CTTTATTGCAACTACTTTTG+TGG - chr3.4:19094697-19094716 MS.gene93591:CDS 30.0%
AAAAGAGGCTTTCCTTGTAA+TGG - chr3.4:19093819-19093838 MS.gene93591:CDS 35.0%
AACAAATCTCAACATACCTC+GGG + chr3.4:19094316-19094335 None:intergenic 35.0%
ACTGTAAAAAGCAGTACACA+TGG - chr3.4:19095664-19095683 MS.gene93591:intron 35.0%
AGAAGTCATTAACGAGAAAG+TGG - chr3.4:19094637-19094656 MS.gene93591:CDS 35.0%
ATAAATTAAGGTGAGCACCA+AGG - chr3.4:19094344-19094363 MS.gene93591:CDS 35.0%
ATTTAGGTAGATCAGGAATG+CGG + chr3.4:19094858-19094877 None:intergenic 35.0%
CCATTCATCTCCATCAATTT+AGG - chr3.4:19094973-19094992 MS.gene93591:CDS 35.0%
CCTAAATTGATGGAGATGAA+TGG + chr3.4:19094976-19094995 None:intergenic 35.0%
CTATGACCAACCTAAATTGA+TGG + chr3.4:19094986-19095005 None:intergenic 35.0%
CTCAAAACGTTTGTGATTTG+TGG + chr3.4:19094227-19094246 None:intergenic 35.0%
CTGTAAAAAGCAGTACACAT+GGG - chr3.4:19095665-19095684 MS.gene93591:intron 35.0%
CTTGAATATGTTAGGCACTT+GGG - chr3.4:19094755-19094774 MS.gene93591:intron 35.0%
GAAAGCAGAAAATCTTCTGT+TGG - chr3.4:19094159-19094178 MS.gene93591:CDS 35.0%
GAGCAATCAATCACTGATAT+TGG - chr3.4:19095042-19095061 MS.gene93591:intron 35.0%
GATTTCTTTGTAACTTCAGC+AGG - chr3.4:19096217-19096236 MS.gene93591:CDS 35.0%
GCTAATGCCATCTATGATAT+GGG - chr3.4:19093790-19093809 MS.gene93591:CDS 35.0%
GGGCAAAGAAAAAAAACTCT+TGG - chr3.4:19095266-19095285 MS.gene93591:CDS 35.0%
GTGAGGGTTGAATTGAATTT+AGG + chr3.4:19094874-19094893 None:intergenic 35.0%
TAACGAGAAAGTGGACATAT+GGG - chr3.4:19094646-19094665 MS.gene93591:CDS 35.0%
TACAAAAGTCATTACCTGAC+AGG - chr3.4:19095122-19095141 MS.gene93591:intron 35.0%
TCATCTCCATCAATTTAGGT+TGG - chr3.4:19094977-19094996 MS.gene93591:CDS 35.0%
TCATTTGCATGACCTTTATC+CGG + chr3.4:19095745-19095764 None:intergenic 35.0%
TCTCGTTAATGACTTCTTTC+AGG + chr3.4:19094634-19094653 None:intergenic 35.0%
TCTGCTGAAAGGGATTTAAA+CGG + chr3.4:19096314-19096333 None:intergenic 35.0%
TCTGTGATGAAGTTGTTGAT+AGG - chr3.4:19093742-19093761 MS.gene93591:CDS 35.0%
TGAGAAGCAAATGTCAAATC+TGG - chr3.4:19095762-19095781 MS.gene93591:intron 35.0%
TGATATTGGGTATTCTTCCA+TGG - chr3.4:19095056-19095075 MS.gene93591:intron 35.0%
TGCTAATGCCATCTATGATA+TGG - chr3.4:19093789-19093808 MS.gene93591:CDS 35.0%
TTAACGAGAAAGTGGACATA+TGG - chr3.4:19094645-19094664 MS.gene93591:CDS 35.0%
TTCGCACATAAAGAGCAAAA+TGG - chr3.4:19093538-19093557 MS.gene93591:CDS 35.0%
TTTGAGAAGCCAGAAGAAAT+GGG - chr3.4:19094241-19094260 MS.gene93591:CDS 35.0%
TTTGCCCTAATTCACTTCAA+GGG + chr3.4:19095253-19095272 None:intergenic 35.0%
! AAAGAGCAAAATGGTCTTGA+AGG - chr3.4:19093547-19093566 MS.gene93591:CDS 35.0%
! AGCAGTAAGCTTTTCATACT+TGG + chr3.4:19095968-19095987 None:intergenic 35.0%
! CTTCAAAAGTGCATTTGATG+GGG - chr3.4:19094801-19094820 MS.gene93591:intron 35.0%
! GCACATAGTATTCGAGTTTA+TGG + chr3.4:19094449-19094468 None:intergenic 35.0%
! GCAGGTTCTTTTAATCTTCA+GGG - chr3.4:19093906-19093925 MS.gene93591:intron 35.0%
! GTTTTGTGTGCATTTAGATG+TGG - chr3.4:19094600-19094619 MS.gene93591:CDS 35.0%
! TGAAGCATTATCTGCTGAAA+GGG + chr3.4:19096324-19096343 None:intergenic 35.0%
! TTGAAGCATTATCTGCTGAA+AGG + chr3.4:19096325-19096344 None:intergenic 35.0%
! TTTTGCTCTTTATGTGCGAA+TGG + chr3.4:19093538-19093557 None:intergenic 35.0%
!! ATCACTTGGATTAGTGAAGA+AGG - chr3.4:19093714-19093733 MS.gene93591:CDS 35.0%
!! CATTGGACTTGATTTGTTTG+TGG + chr3.4:19095380-19095399 None:intergenic 35.0%
!! TTTTGAGAAGCCAGAAGAAA+TGG - chr3.4:19094240-19094259 MS.gene93591:CDS 35.0%
!!! GATTTTGATTCTTGGGGTTT+TGG - chr3.4:19096401-19096420 MS.gene93591:CDS 35.0%
AAAGGTTGCCATGATGACTT+TGG + chr3.4:19096275-19096294 None:intergenic 40.0%
AAATCAACTTCTCAACCTGC+TGG - chr3.4:19096533-19096552 MS.gene93591:CDS 40.0%
AATCTTCTGTTGGGTTCAGA+TGG - chr3.4:19094169-19094188 MS.gene93591:CDS 40.0%
ACAAATCTCAACATACCTCG+GGG + chr3.4:19094315-19094334 None:intergenic 40.0%
AGTTGCATCATCTGCATCTT+TGG - chr3.4:19096086-19096105 MS.gene93591:intron 40.0%
ATGCCATCTATGATATGGGT+AGG - chr3.4:19093794-19093813 MS.gene93591:CDS 40.0%
CAAAAAATGGGAACCCAAGA+TGG + chr3.4:19094510-19094529 None:intergenic 40.0%
CAAGAATCAAAATCAGCAGC+CGG + chr3.4:19096395-19096414 None:intergenic 40.0%
CATTTGCATGACCTTTATCC+GGG + chr3.4:19095744-19095763 None:intergenic 40.0%
CTTTGCCCTAATTCACTTCA+AGG + chr3.4:19095254-19095273 None:intergenic 40.0%
GCAATTCTTGCCTTTGTGAA+CGG + chr3.4:19095996-19096015 None:intergenic 40.0%
GCATGAAGTGTGACAACATT+AGG + chr3.4:19093772-19093791 None:intergenic 40.0%
GCATGGTAACAAATCCACAA+GGG - chr3.4:19095864-19095883 MS.gene93591:CDS 40.0%
GCTTGAATATGTTAGGCACT+TGG - chr3.4:19094754-19094773 MS.gene93591:intron 40.0%
GGTCGTTCTTCATCATATAC+AGG + chr3.4:19095562-19095581 None:intergenic 40.0%
GTGCTTAGGTTCAATCTCAT+TGG - chr3.4:19094405-19094424 MS.gene93591:CDS 40.0%
GTTCAGAACCAAAGTCATCA+TGG - chr3.4:19096264-19096283 MS.gene93591:CDS 40.0%
TACGTTGTGTTTGTGACACA+TGG - chr3.4:19096170-19096189 MS.gene93591:CDS 40.0%
TATTGGGTATTCTTCCATGG+TGG - chr3.4:19095059-19095078 MS.gene93591:intron 40.0%
TATTGTTACCGGTGAGCAAT+AGG + chr3.4:19093973-19093992 None:intergenic 40.0%
TCCTCAATTCCCATTTCTTC+TGG + chr3.4:19094253-19094272 None:intergenic 40.0%
TGATATGGGTAGGACAAAAG+AGG - chr3.4:19093804-19093823 MS.gene93591:CDS 40.0%
TGCAACGATGAAGAATCACT+TGG - chr3.4:19093700-19093719 MS.gene93591:CDS 40.0%
TGTCCTACCCATATCATAGA+TGG + chr3.4:19093800-19093819 None:intergenic 40.0%
TGTTGGGTTCAGATGGTTTA+TGG - chr3.4:19094176-19094195 MS.gene93591:CDS 40.0%
TTAAACGGTTCAGTTTCCTC+CGG + chr3.4:19096299-19096318 None:intergenic 40.0%
TTCACAAAGGCAAGAATTGC+AGG - chr3.4:19095996-19096015 MS.gene93591:intron 40.0%
TTCAGCAGGATAGAAGTGAA+TGG - chr3.4:19096231-19096250 MS.gene93591:CDS 40.0%
TTCCAACAATCATGAAGGTG+AGG - chr3.4:19095162-19095181 MS.gene93591:CDS 40.0%
TTCGGTAACTGATCATTGTC+CGG + chr3.4:19095604-19095623 None:intergenic 40.0%
! GGAATTTTGTGAGAAGTCTC+TGG - chr3.4:19093840-19093859 MS.gene93591:intron 40.0%
! GGCAGGTTCTTTTAATCTTC+AGG - chr3.4:19093905-19093924 MS.gene93591:intron 40.0%
! GGGAGTAAAGCTCATGTTTT+CGG - chr3.4:19096488-19096507 MS.gene93591:CDS 40.0%
! TAAAGCTCATGTTTTCGGTG+AGG - chr3.4:19096493-19096512 MS.gene93591:CDS 40.0%
! TTGTGTGTTAGCCACTTTGT+TGG + chr3.4:19095638-19095657 None:intergenic 40.0%
!! GATGACTTTGGTTCTGAACT+AGG + chr3.4:19096263-19096282 None:intergenic 40.0%
!! TTGCTCTAATTCTAGAGCCT+AGG + chr3.4:19095028-19095047 None:intergenic 40.0%
!!! GCTGCTGATTTTGATTCTTG+GGG - chr3.4:19096395-19096414 MS.gene93591:CDS 40.0%
!!! GGCTGCTGATTTTGATTCTT+GGG - chr3.4:19096394-19096413 MS.gene93591:CDS 40.0%
!!! GTGCTGGTTATTTTGAAGAG+AGG - chr3.4:19093884-19093903 MS.gene93591:intron 40.0%
!!! TGGTTATTTTGAAGAGAGGC+AGG - chr3.4:19093888-19093907 MS.gene93591:intron 40.0%
AAACCCTCTCTACTTGGAGA+TGG + chr3.4:19096051-19096070 None:intergenic 45.0%
AAAGGATTCACATGTCCCTG+AGG - chr3.4:19095525-19095544 MS.gene93591:intron 45.0%
AAATCTCAACATACCTCGGG+GGG + chr3.4:19094313-19094332 None:intergenic 45.0%
AACTCCATCTCCAAGTAGAG+AGG - chr3.4:19096044-19096063 MS.gene93591:intron 45.0%
AACTTCTCAACCTGCTGGAT+GGG - chr3.4:19096538-19096557 MS.gene93591:CDS 45.0%
ACAAGCTCATTGCTGAAGGA+GGG - chr3.4:19093608-19093627 MS.gene93591:CDS 45.0%
ACTATGTGCATCTGAATGCC+AGG - chr3.4:19094460-19094479 MS.gene93591:CDS 45.0%
ACTCCATCTCCAAGTAGAGA+GGG - chr3.4:19096045-19096064 MS.gene93591:intron 45.0%
AGCACTCGAATAACTTCGCA+CGG + chr3.4:19094390-19094409 None:intergenic 45.0%
AGGGTTCTCATGTGTCTACT+TGG - chr3.4:19093627-19093646 MS.gene93591:CDS 45.0%
ATACCGCTAAGCTAAACTCC+GGG - chr3.4:19095842-19095861 MS.gene93591:CDS 45.0%
CAAATCTCAACATACCTCGG+GGG + chr3.4:19094314-19094333 None:intergenic 45.0%
CATCCATCCATAGCATTCCT+AGG - chr3.4:19095008-19095027 MS.gene93591:intron 45.0%
CCTGCTTCCAACAATCATGA+AGG - chr3.4:19095157-19095176 MS.gene93591:CDS 45.0%
CCTTCATGATTGTTGGAAGC+AGG + chr3.4:19095160-19095179 None:intergenic 45.0%
CTCTAATGCTTCTTCCCTTG+TGG + chr3.4:19095881-19095900 None:intergenic 45.0%
GAACAAGCCAGCTATTCAAC+CGG - chr3.4:19096373-19096392 MS.gene93591:CDS 45.0%
GAAGGTCGTTCTATAGACGT+TGG - chr3.4:19093565-19093584 MS.gene93591:CDS 45.0%
GATACCGCTAAGCTAAACTC+CGG - chr3.4:19095841-19095860 MS.gene93591:CDS 45.0%
GCCAGAAGAAATGGGAATTG+AGG - chr3.4:19094249-19094268 MS.gene93591:CDS 45.0%
GCGAAGTTATTCGAGTGCTT+AGG - chr3.4:19094391-19094410 MS.gene93591:CDS 45.0%
GGCATGGTAACAAATCCACA+AGG - chr3.4:19095863-19095882 MS.gene93591:CDS 45.0%
GTCTCTGATCAAGTCTGTGA+GGG + chr3.4:19094890-19094909 None:intergenic 45.0%
TAAACGGTTCAGTTTCCTCC+GGG + chr3.4:19096298-19096317 None:intergenic 45.0%
TAGAAGCAAGAGATGGCTGA+GGG + chr3.4:19095453-19095472 None:intergenic 45.0%
TATGTCCTGGCTACCATCTT+GGG - chr3.4:19094494-19094513 MS.gene93591:CDS 45.0%
TCACATGTCCCTGAGGAAAA+GGG - chr3.4:19095532-19095551 MS.gene93591:intron 45.0%
TCAGCCATCTCTTGCTTCTA+GGG - chr3.4:19095453-19095472 MS.gene93591:CDS 45.0%
TGAATCCTTTGCATGCAGAG+TGG + chr3.4:19095515-19095534 None:intergenic 45.0%
TGCCTCACCTTCATGATTGT+TGG + chr3.4:19095167-19095186 None:intergenic 45.0%
TGTCTCTGATCAAGTCTGTG+AGG + chr3.4:19094891-19094910 None:intergenic 45.0%
TTCACATGTCCCTGAGGAAA+AGG - chr3.4:19095531-19095550 MS.gene93591:intron 45.0%
! CATGTTTTCGGTGAGGCAAA+GGG - chr3.4:19096500-19096519 MS.gene93591:CDS 45.0%
! TCATGTTTTCGGTGAGGCAA+AGG - chr3.4:19096499-19096518 MS.gene93591:CDS 45.0%
! TCTAGAGCCTAGGAATGCTA+TGG + chr3.4:19095018-19095037 None:intergenic 45.0%
!! AGAAGCATTAGAGTCTGAGG+TGG - chr3.4:19095888-19095907 MS.gene93591:CDS 45.0%
!! GGAAGAAGCATTAGAGTCTG+AGG - chr3.4:19095885-19095904 MS.gene93591:CDS 45.0%
!! GTTCTGAAACCCTCTCTACT+TGG + chr3.4:19096057-19096076 None:intergenic 45.0%
!! TGTGGATTTGTTACCATGCC+CGG + chr3.4:19095863-19095882 None:intergenic 45.0%
!!! CGGCTGCTGATTTTGATTCT+TGG - chr3.4:19096393-19096412 MS.gene93591:CDS 45.0%
AAATCCACCTCCTCCTCCAT+CGG - chr3.4:19095408-19095427 MS.gene93591:intron 50.0%
ACCTGAAGCTGCATCTTCCA+AGG - chr3.4:19095699-19095718 MS.gene93591:intron 50.0%
AGAAGCAAGAGATGGCTGAG+GGG + chr3.4:19095452-19095471 None:intergenic 50.0%
AGAGCTTTCCAACACAGCCT+TGG + chr3.4:19094364-19094383 None:intergenic 50.0%
AGATGATGCAACTCCAGGAG+AGG + chr3.4:19096079-19096098 None:intergenic 50.0%
AGATGCCAAGACCTGGTGAA+GGG - chr3.4:19096468-19096487 MS.gene93591:CDS 50.0%
AGGCAAGCGCTTTGCTTGAT+TGG - chr3.4:19094950-19094969 MS.gene93591:CDS 50.0%
CAACTTCTCAACCTGCTGGA+TGG - chr3.4:19096537-19096556 MS.gene93591:CDS 50.0%
CAATCTCATTGGCGTAGAGC+TGG - chr3.4:19094416-19094435 MS.gene93591:CDS 50.0%
CACAAGCTCATTGCTGAAGG+AGG - chr3.4:19093607-19093626 MS.gene93591:CDS 50.0%
CAGCCATCTCTTGCTTCTAG+GGG - chr3.4:19095454-19095473 MS.gene93591:CDS 50.0%
CATTGTCCGGACGAACTTTG+TGG + chr3.4:19095591-19095610 None:intergenic 50.0%
CTAGAAGCAAGAGATGGCTG+AGG + chr3.4:19095454-19095473 None:intergenic 50.0%
CTCAGCCATCTCTTGCTTCT+AGG - chr3.4:19095452-19095471 MS.gene93591:CDS 50.0%
CTCCTTCAGCAATGAGCTTG+TGG + chr3.4:19093609-19093628 None:intergenic 50.0%
CTGCTATCTGCCGTTCACAA+AGG - chr3.4:19095983-19096002 MS.gene93591:intron 50.0%
GAAACTCAGAGAGCAGCTGA+AGG - chr3.4:19095912-19095931 MS.gene93591:CDS 50.0%
GAAGTCTCTGGTTAGTGTGC+TGG - chr3.4:19093852-19093871 MS.gene93591:intron 50.0%
GAGCCTAGGAATGCTATGGA+TGG + chr3.4:19095014-19095033 None:intergenic 50.0%
GATGCAGATGATGCAACTCC+AGG + chr3.4:19096084-19096103 None:intergenic 50.0%
GCACTCGAATAACTTCGCAC+GGG + chr3.4:19094389-19094408 None:intergenic 50.0%
GTATGTCCTGGCTACCATCT+TGG - chr3.4:19094493-19094512 MS.gene93591:CDS 50.0%
GTCATCATGGCAACCTTTCC+CGG - chr3.4:19096277-19096296 MS.gene93591:CDS 50.0%
GTCCACAAGCTCATTGCTGA+AGG - chr3.4:19093604-19093623 MS.gene93591:CDS 50.0%
GTGATATCTGGTCTGTCGTC+TGG + chr3.4:19094928-19094947 None:intergenic 50.0%
TAAAAACCAGCCCATCCAGC+AGG + chr3.4:19096551-19096570 None:intergenic 50.0%
TAGCCACCACAAAGTTCGTC+CGG - chr3.4:19095582-19095601 MS.gene93591:intron 50.0%
TCCTTGGAAGATGCAGCTTC+AGG + chr3.4:19095703-19095722 None:intergenic 50.0%
TGAGCTTTACTCCCTTCACC+AGG + chr3.4:19096482-19096501 None:intergenic 50.0%
TGTTACCGGTGAGCAATAGG+CGG + chr3.4:19093970-19093989 None:intergenic 50.0%
TTACTCCCTTCACCAGGTCT+TGG + chr3.4:19096476-19096495 None:intergenic 50.0%
TTCTTCCATGGTGGCAGGTT+TGG - chr3.4:19095068-19095087 MS.gene93591:intron 50.0%
TTGTTGGAAGCAGGCGATTC+AGG + chr3.4:19095151-19095170 None:intergenic 50.0%
! AGATGGCTGAGGGGTAGTTT+TGG + chr3.4:19095443-19095462 None:intergenic 50.0%
! ATCTCTTGCTTCTAGGGGAG+GGG - chr3.4:19095459-19095478 MS.gene93591:intron 50.0%
! ATGCCCGGAGTTTAGCTTAG+CGG + chr3.4:19095848-19095867 None:intergenic 50.0%
! CATCTCTTGCTTCTAGGGGA+GGG - chr3.4:19095458-19095477 MS.gene93591:intron 50.0%
! GATGGCTGAGGGGTAGTTTT+GGG + chr3.4:19095442-19095461 None:intergenic 50.0%
!!! GTTTTGGGTTCTGCAACCGA+TGG + chr3.4:19095427-19095446 None:intergenic 50.0%
ACATTTAGTGCTGCCCGTGC+TGG - chr3.4:19096431-19096450 MS.gene93591:CDS 55.0%
ATCATGGCAACCTTTCCCGG+AGG - chr3.4:19096280-19096299 MS.gene93591:CDS 55.0%
CACCAGGTCTTGGCATCTGT+GGG + chr3.4:19096466-19096485 None:intergenic 55.0%
CAGATGCCAAGACCTGGTGA+AGG - chr3.4:19096467-19096486 MS.gene93591:CDS 55.0%
CCTCCCCTAGAAGCAAGAGA+TGG + chr3.4:19095460-19095479 None:intergenic 55.0%
CGAAACCAAACCTGCCACCA+TGG + chr3.4:19095076-19095095 None:intergenic 55.0%
CGACAGACCAGATATCACGC+AGG - chr3.4:19094930-19094949 MS.gene93591:CDS 55.0%
CTGGTCCACTCTGCATGCAA+AGG - chr3.4:19095507-19095526 MS.gene93591:intron 55.0%
GAGGGTTTCAGAACCTCTCC+TGG - chr3.4:19096063-19096082 MS.gene93591:intron 55.0%
GATGGTAGCCAGGACATACG+AGG + chr3.4:19094492-19094511 None:intergenic 55.0%
GCTAAGCTAAACTCCGGGCA+TGG - chr3.4:19095847-19095866 MS.gene93591:CDS 55.0%
GGACAATGCCTCGTATGTCC+TGG - chr3.4:19094481-19094500 MS.gene93591:CDS 55.0%
GGACGAACTTTGTGGTGGCT+AGG + chr3.4:19095583-19095602 None:intergenic 55.0%
GGGTATTCTTCCATGGTGGC+AGG - chr3.4:19095063-19095082 MS.gene93591:intron 55.0%
GGTTCAGTTTCCTCCGGGAA+AGG + chr3.4:19096293-19096312 None:intergenic 55.0%
GTTACCGGTGAGCAATAGGC+GGG + chr3.4:19093969-19093988 None:intergenic 55.0%
GTTAGTGTGCTGGAGAGTCG+CGG - chr3.4:19093862-19093881 MS.gene93591:intron 55.0%
TCACCAGGTCTTGGCATCTG+TGG + chr3.4:19096467-19096486 None:intergenic 55.0%
TCAGCAGCCGGTTGAATAGC+TGG + chr3.4:19096383-19096402 None:intergenic 55.0%
TCTCATTGGCGTAGAGCTGG+TGG - chr3.4:19094419-19094438 MS.gene93591:CDS 55.0%
TGTCCGGACGAACTTTGTGG+TGG + chr3.4:19095588-19095607 None:intergenic 55.0%
TTACCGGTGAGCAATAGGCG+GGG + chr3.4:19093968-19093987 None:intergenic 55.0%
TTGGAAGCAGGCGATTCAGG+AGG + chr3.4:19095148-19095167 None:intergenic 55.0%
TTGGGTTCTGCAACCGATGG+AGG + chr3.4:19095424-19095443 None:intergenic 55.0%
! ACAGGCTTGCCCTTTTCCTC+AGG + chr3.4:19095544-19095563 None:intergenic 55.0%
! CAGGCTTGCCCTTTTCCTCA+GGG + chr3.4:19095543-19095562 None:intergenic 55.0%
! CCATCTCTTGCTTCTAGGGG+AGG - chr3.4:19095457-19095476 MS.gene93591:intron 55.0%
! CTTCTAGGGGAGGGGAAAGT+GGG - chr3.4:19095467-19095486 MS.gene93591:intron 55.0%
! GGTGGATTTCTGCGAGGCAT+TGG + chr3.4:19095397-19095416 None:intergenic 55.0%
! TCTTGGCATCTGTGGGCTAC+CGG + chr3.4:19096459-19096478 None:intergenic 55.0%
! TTCTAGGGGAGGGGAAAGTG+GGG - chr3.4:19095468-19095487 MS.gene93591:intron 55.0%
!! GGACATACGAGGCATTGTCC+TGG + chr3.4:19094481-19094500 None:intergenic 55.0%
ACATACCTCGGGGGGTCTGT+AGG + chr3.4:19094305-19094324 None:intergenic 60.0%
AGCCCACAGATGCCAAGACC+TGG - chr3.4:19096461-19096480 MS.gene93591:CDS 60.0%
AGTCCCCGCCTATTGCTCAC+CGG - chr3.4:19093962-19093981 MS.gene93591:intron 60.0%
GCGCTTGCCTGCGTGATATC+TGG + chr3.4:19094940-19094959 None:intergenic 60.0%
GGGAACCCAAGATGGTAGCC+AGG + chr3.4:19094502-19094521 None:intergenic 60.0%
GGTGAGCACCAAGGCTGTGT+TGG - chr3.4:19094353-19094372 MS.gene93591:CDS 60.0%
GGTTCTGCAACCGATGGAGG+AGG + chr3.4:19095421-19095440 None:intergenic 60.0%
TCTAGGGGAGGGGAAAGTGG+GGG - chr3.4:19095469-19095488 MS.gene93591:intron 60.0%
TCTCAACCTGCTGGATGGGC+TGG - chr3.4:19096542-19096561 MS.gene93591:CDS 60.0%
TCTGCAACCGATGGAGGAGG+AGG + chr3.4:19095418-19095437 None:intergenic 60.0%
! GCTTCTAGGGGAGGGGAAAG+TGG - chr3.4:19095466-19095485 MS.gene93591:intron 60.0%
! GGAGGAGGTGGATTTCTGCG+AGG + chr3.4:19095403-19095422 None:intergenic 60.0%
CTAGGGGAGGGGAAAGTGGG+GGG - chr3.4:19095470-19095489 MS.gene93591:intron 65.0%
GCAACCGATGGAGGAGGAGG+TGG + chr3.4:19095415-19095434 None:intergenic 65.0%
GGCGATTCAGGAGGCCTGTC+AGG + chr3.4:19095139-19095158 None:intergenic 65.0%
GGTGAGCAATAGGCGGGGAC+TGG + chr3.4:19093963-19093982 None:intergenic 65.0%
TGGGCTACCGGTACCAGCAC+GGG + chr3.4:19096447-19096466 None:intergenic 65.0%
! AGTGCTGCCCGTGCTGGTAC+CGG - chr3.4:19096437-19096456 MS.gene93591:CDS 65.0%
! GTGGGCTACCGGTACCAGCA+CGG + chr3.4:19096448-19096467 None:intergenic 65.0%
!! GGGGGCAGCTTGGTGCTTTC+TGG - chr3.4:19095488-19095507 MS.gene93591:intron 65.0%
ACCTCGGGGGGTCTGTAGGC+AGG + chr3.4:19094301-19094320 None:intergenic 70.0%
CCTCGGGGGGTCTGTAGGCA+GGG + chr3.4:19094300-19094319 None:intergenic 70.0%
CTCGGGGGGTCTGTAGGCAG+GGG + chr3.4:19094299-19094318 None:intergenic 70.0%
GGGGAAAGTGGGGGGCAGCT+TGG - chr3.4:19095478-19095497 MS.gene93591:intron 70.0%
GTGCTGGAGAGTCGCGGTGC+TGG - chr3.4:19093868-19093887 MS.gene93591:intron 70.0%
! AGGCGGGGACTGGCAGTGCA+TGG + chr3.4:19093953-19093972 None:intergenic 70.0%
CCCTGCCTACAGACCCCCCG+AGG - chr3.4:19094297-19094316 MS.gene93591:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 19093520 19096571 19093520 ID=MS.gene93591
chr3.4 mRNA 19093520 19096571 19093520 ID=MS.gene93591.t1;Parent=MS.gene93591
chr3.4 exon 19096108 19096571 19096108 ID=MS.gene93591.t1.exon1;Parent=MS.gene93591.t1
chr3.4 CDS 19096108 19096571 19096108 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19095773 19095938 19095773 ID=MS.gene93591.t1.exon2;Parent=MS.gene93591.t1
chr3.4 CDS 19095773 19095938 19095773 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19095424 19095474 19095424 ID=MS.gene93591.t1.exon3;Parent=MS.gene93591.t1
chr3.4 CDS 19095424 19095474 19095424 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19095140 19095322 19095140 ID=MS.gene93591.t1.exon4;Parent=MS.gene93591.t1
chr3.4 CDS 19095140 19095322 19095140 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19094913 19095006 19094913 ID=MS.gene93591.t1.exon5;Parent=MS.gene93591.t1
chr3.4 CDS 19094913 19095006 19094913 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19093984 19094726 19093984 ID=MS.gene93591.t1.exon6;Parent=MS.gene93591.t1
chr3.4 CDS 19093984 19094726 19093984 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
chr3.4 exon 19093520 19093855 19093520 ID=MS.gene93591.t1.exon7;Parent=MS.gene93591.t1
chr3.4 CDS 19093520 19093855 19093520 ID=cds.MS.gene93591.t1;Parent=MS.gene93591.t1
Gene Sequence

>MS.gene93591

ATGTGGAAATTTAAGCCATTCGCACATAAAGAGCAAAATGGTCTTGAAGGTCGTTCTATAGACGTTGGTAATCTCAAACTACATGTCCACAAGCTCATTGCTGAAGGAGGGTTCTCATGTGTCTACTTGGCTCGTGATGCTGTACATATGTCGAAACAGTATGCTTTGAAGCACATAATATGCAACGATGAAGAATCACTTGGATTAGTGAAGAAGGAGATATCTGTGATGAAGTTGTTGATAGGACATCCTAATGTTGTCACACTTCATGCTAATGCCATCTATGATATGGGTAGGACAAAAGAGGCTTTCCTTGTAATGGAATTTTGTGAGAAGTCTCTGGTTAGTGTGCTGGAGAGTCGCGGTGCTGGTTATTTTGAAGAGAGGCAGGTTCTTTTAATCTTCAGGGATGTGTGTAATGCAGTCTTCGCCATGCACTGCCAGTCCCCGCCTATTGCTCACCGGTAACAATACTAGTGATTCTTTAAATATGGTTATTTGAATTGTACTGTTTCATATGCCTGATTTTACTTTGTTTTTGCGTGACATTGTTCAGAAGTTTGATAAATCTAGCACGAGTTTGTAAGATGCTTTTAGAATTATTAATAAATTACTTTTCTTTTTGTTTCTCAGAGACTTGAAAGCAGAAAATCTTCTGTTGGGTTCAGATGGTTTATGGAAGTTGTGTGATTTTGGAAGCATTTCCACAAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGAATTGAGGAAGATAATATCAGAAAGTACACAACCCCTGCCTACAGACCCCCCGAGGTATGTTGAGATTTGTTTTTTCTATATAAATTAAGGTGAGCACCAAGGCTGTGTTGGAAAGCTCTAGCCCGTGCGAAGTTATTCGAGTGCTTAGGTTCAATCTCATTGGCGTAGAGCTGGTGGAAAGCCATAAACTCGAATACTATGTGCATCTGAATGCCAGGACAATGCCTCGTATGTCCTGGCTACCATCTTGGGTTCCCATTTTTTGTGCCCATTAAAAAAATAAATTGTAGTCATGTCTGATACAATTACAAATGAATGAATGGTCACAAATTTTTGTTTTGTGTGCATTTAGATGTGGGATCTGTTCCTGAAAGAAGTCATTAACGAGAAAGTGGACATATGGGTAAGTCGTCGTATACGCCTAAAACATCTCTTTATTGCAACTACTTTTGTGGAATCATTTTCTGCTAACTGACAAATCATATTACTGCTTGAATATGTTAGGCACTTGGGTGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTTCAAGTCTTAAATGGAAACTACCGCATTCCTGATCTACCTAAATTCAATTCAACCCTCACAGACTTGATCAGAGACATGCTTCAAGCTCGACCAGACGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCATCTCCATCAATTTAGGTTGGTCATAGATCATCCATCCATAGCATTCCTAGGCTCTAGAATTAGAGCAATCAATCACTGATATTGGGTATTCTTCCATGGTGGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCCATTGATTTACAAAAGTCATTACCTGACAGGCCTCCTGAATCGCCTGCTTCCAACAATCATGAAGGTGAGGCATGTCTTGAATAACATGCTAAGTCTATTTTCATGTTTTATGAATGCTTACATCATTGAATTTTACCCTTGAAGTGAATTAGGGCAAAGAAAAAAAACTCTTGGTAGAATATTGGAATTGTATATTTTATTTTAACCTAATATCAGACAGAAAGATTAATTTGTAGCTAAATTTTTGTAGGTGCTTCAATGTCCACAAACAAATCAAGTCCAATGCCTCGCAGAAATCCACCTCCTCCTCCATCGGTTGCAGAACCCAAAACTACCCCTCAGCCATCTCTTGCTTCTAGGGGAGGGGAAAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCTGCATGCAAAGGATTCACATGTCCCTGAGGAAAAGGGCAAGCCTGTATATGATGAAGAACGACCTAGCCACCACAAAGTTCGTCCGGACAATGATCAGTTACCGAAAAATGTTAGTACCAACAAAGTGGCTAACACACAAACTCAGACTGTAAAAAGCAGTACACATGGGAAGTTACACAAACCTGAAGCTGCATCTTCCAAGGACTTTGAAATAAATTTTTTCCCGGATAAAGGTCATGCAAATGAGAAGCAAATGTCAAATCTGGAGAAGAAAAATAATAATTTTCAAGACCAGTCTTTTAACACTTTTGTTGCAGAGTTTGATACCGCTAAGCTAAACTCCGGGCATGGTAACAAATCCACAAGGGAAGAAGCATTAGAGTCTGAGGTGGAGAAACTCAGAGAGCAGCTGAAGGAAGCTAACTTAGAGAAATCTGAAATCACTGCCAAGTATGAAAAGCTTACTGCTATCTGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAACACGTGCAGCAAAAACTCCATCTCCAAGTAGAGAGGGTTTCAGAACCTCTCCTGGAGTTGCATCATCTGCATCTTTGGTAATGAGCATTTTATAGTTTTTTCCTCCCAAATAATTTGTATTTGCATGAATTATTTTGTTTACGTTGTGTTTGTGACACATGGTTATATCTATGTCATCCTAATTGTGATTTCTTTGTAACTTCAGCAGGATAGAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATCATGGCAACCTTTCCCGGAGGAAACTGAACCGTTTAAATCCCTTTCAGCAGATAATGCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAACAAGCCAGCTATTCAACCGGCTGCTGATTTTGATTCTTGGGGTTTTGGCGCAGATACATTTAGTGCTGCCCGTGCTGGTACCGGTAGCCCACAGATGCCAAGACCTGGTGAAGGGAGTAAAGCTCATGTTTTCGGTGAGGCAAAGGGTTTTGAGAGCAAATCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAA
Protein sequence

>MS.gene93591.t1

MWKFKPFAHKEQNGLEGRSIDVGNLKLHVHKLIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLIGHPNVVTLHANAIYDMGRTKEAFLVMEFCEKSLVSVLESRGAGYFEERQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRPPEMWDLFLKEVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKFNSTLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPASNNHEGASMSTNKSSPMPRRNPPPPPSVAEPKTTPQPSLASRGGESGGQLGAFWSTLHAKDSHVPEEKGKPVYDEERPSHHKVRPDNDQLPKNVSTNKVANTQTQTVKSSTHGKLHKPEAASSKDFEINFFPDKGHANEKQMSNLEKKNNNFQDQSFNTFVAEFDTAKLNSGHGNKSTREEALESEVEKLREQLKEANLEKSEITAKYEKLTAICRSQRQELQDLKQTRAAKTPSPSREGFRTSPGVASSASLQDRSEWKTPSSEPKSSWQPFPEETEPFKSLSADNASKSVRSRNGQQNKPAIQPAADFDSWGFGADTFSAARAGTGSPQMPRPGEGSKAHVFGEAKGFESKSTSQPAGWAGF