AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93889

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 90 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTTCTAATGCAAATTT+TGG 0.122246 4.2:+70401248 MS.gene93889:CDS
TTCTCTGAAGAGAACAAAAT+TGG 0.244271 4.2:+70401140 MS.gene93889:CDS
GTATGTGGGCTATTAGAAAA+TGG 0.261767 4.2:+70400255 MS.gene93889:CDS
TATCTGTGTCTTCTTGTCTT+TGG 0.277755 4.2:-70401276 None:intergenic
TTTGGATTGTTGGGGTGATA+TGG 0.300063 4.2:+70400404 MS.gene93889:CDS
GAATAATTTCCACCATTCTT+TGG 0.302259 4.2:-70400330 None:intergenic
AATGTTGCATTTCTAGTAGT+TGG 0.323607 4.2:+70400864 MS.gene93889:CDS
ATGATGGAATTGTTACTTGT+TGG 0.336768 4.2:+70400496 MS.gene93889:CDS
CATGTCTGTGGACTCGTTAA+AGG 0.339093 4.2:+70400132 MS.gene93889:CDS
AATGAAATGAATCTCCCTTT+TGG 0.345893 4.2:-70400438 None:intergenic
GGGAAATGGAGGTACCCTTT+TGG 0.357278 4.2:+70401076 MS.gene93889:CDS
CATTTCCCATGCTGATTACA+TGG 0.362754 4.2:-70401061 None:intergenic
GGGCTATTAGAAAATGGAAA+TGG 0.367283 4.2:+70400261 MS.gene93889:CDS
TGATGGTGATTTGGATTGTT+GGG 0.367381 4.2:+70400395 MS.gene93889:CDS
AAAAGGGAGATTCATTTCAT+TGG 0.376808 4.2:+70400440 MS.gene93889:CDS
TGATGGAATTGTTACTTGTT+GGG 0.376987 4.2:+70400497 MS.gene93889:CDS
AAAATTGGCGTCGGTAGCTT+TGG 0.379813 4.2:+70401155 MS.gene93889:CDS
TCCATGATATAGTCGTTTAA+AGG 0.386348 4.2:-70400076 None:intergenic
TTCCTTTGCAATACTTGTAA+AGG 0.399618 4.2:-70400929 None:intergenic
AGATTCATTTCATTGGCCTT+GGG 0.403769 4.2:+70400447 MS.gene93889:CDS
AATTATTCTGTTATTGAAGC+TGG 0.407388 4.2:+70400345 MS.gene93889:CDS
GGCTATTAGAAAATGGAAAT+GGG 0.408645 4.2:+70400262 MS.gene93889:CDS
CTCTTCAGAGAAATTGTTGG+TGG 0.418560 4.2:-70401129 None:intergenic
TATCACAAATGATGGTGATT+TGG 0.421115 4.2:+70400386 MS.gene93889:CDS
GAGATTCATTTCATTGGCCT+TGG 0.427492 4.2:+70400446 MS.gene93889:CDS
GTTCTCTTCAGAGAAATTGT+TGG 0.438193 4.2:-70401132 None:intergenic
TTTCTAGTAGTTGGATGTGT+TGG 0.450808 4.2:+70400873 MS.gene93889:CDS
TCCTTTAAACGACTATATCA+TGG 0.452018 4.2:+70400075 MS.gene93889:CDS
AGAGATTTCAATTCAAGCTC+CGG 0.462696 4.2:+70400189 MS.gene93889:CDS
ATGATGGTGATTTGGATTGT+TGG 0.463627 4.2:+70400394 MS.gene93889:CDS
GTTATCGAGGATATCGATAG+TGG 0.465825 4.2:+70400102 MS.gene93889:CDS
GAAGGGAAATTTCCTCCAAA+AGG 0.472405 4.2:-70401091 None:intergenic
TGACATGTTCATGTTCCTCC+CGG 0.472714 4.2:-70400208 None:intergenic
CATGTAATCAGCATGGGAAA+TGG 0.473949 4.2:+70401062 MS.gene93889:CDS
CTATCGATATCCTCGATAAC+GGG 0.476932 4.2:-70400099 None:intergenic
GATTGTTGGGGTGATATGGT+TGG 0.478020 4.2:+70400408 MS.gene93889:CDS
CATGGACATTGATTCTTACA+AGG 0.478351 4.2:-70400687 None:intergenic
ATGTCTGTGGACTCGTTAAA+GGG 0.481560 4.2:+70400133 MS.gene93889:CDS
GAAAATAGAACTTGTGCACT+TGG 0.485431 4.2:+70400471 MS.gene93889:CDS
AGCTTACTAGAATCTGATAA+AGG 0.487746 4.2:-70400714 None:intergenic
TGGCGTCGGTAGCTTTGGTT+CGG 0.492780 4.2:+70401160 MS.gene93889:CDS
GGGAATGTTGTTACTTGCAA+AGG 0.496919 4.2:+70400282 MS.gene93889:CDS
GAGATTTCAATTCAAGCTCC+GGG 0.502275 4.2:+70400190 MS.gene93889:CDS
ACTTGTGCACTTGGGTATGA+TGG 0.504861 4.2:+70400480 MS.gene93889:CDS
TTCCTTTACAAGTATTGCAA+AGG 0.513552 4.2:+70400927 MS.gene93889:CDS
ATGGTTGGTGAGAAACCAAA+AGG 0.515401 4.2:+70400423 MS.gene93889:CDS
GGATTCGAAGGTGGTAATGA+TGG 0.515735 4.2:-70400789 None:intergenic
ATTTCAAATGATGGTGAACA+AGG 0.521807 4.2:-70400765 None:intergenic
TATCGTGCAAAACTTGAAGA+TGG 0.522250 4.2:+70401185 MS.gene93889:CDS
GATGGAATTGTTACTTGTTG+GGG 0.522303 4.2:+70400498 MS.gene93889:CDS
TCTAGTAGAGTTCATGACTC+TGG 0.523438 4.2:+70400963 MS.gene93889:CDS
CTTTAACGAGTCCACAGACA+TGG 0.523745 4.2:-70400131 None:intergenic
GATTCATTTCATTGGCCTTG+GGG 0.530745 4.2:+70400448 MS.gene93889:CDS
GTTGTTAATGAACCAAAGAA+TGG 0.531990 4.2:+70400318 MS.gene93889:CDS
ACTATCGATATCCTCGATAA+CGG 0.534400 4.2:-70400100 None:intergenic
CCCGAAAATGCATCGAAAAG+TGG 0.534497 4.2:+70400825 MS.gene93889:CDS
AAGGGAAATTTCCTCCAAAA+GGG 0.539947 4.2:-70401090 None:intergenic
TTCGCCTCGAGTGTTGGCAA+TGG 0.542929 4.2:+70400166 MS.gene93889:CDS
ACCATGCGATTCTCGAGAAG+AGG 0.543721 4.2:+70401033 MS.gene93889:CDS
AATGATGGAATTTCAAATGA+TGG 0.547460 4.2:-70400774 None:intergenic
ACCTCTTCTCGAGAATCGCA+TGG 0.559234 4.2:-70401034 None:intergenic
ATTTGAGACGGTGGATTCGA+AGG 0.561594 4.2:-70400801 None:intergenic
TGAACAAGGTTTGCAAATGA+TGG 0.562905 4.2:-70400751 None:intergenic
GTTTGTGCTATCACAAATGA+TGG 0.570193 4.2:+70400378 MS.gene93889:CDS
CTCTCCATTGCCAACACTCG+AGG 0.575761 4.2:-70400170 None:intergenic
ATGCATCGAAAAGTGGTACA+TGG 0.580975 4.2:+70400832 MS.gene93889:CDS
GGCTTCAAGTAATGTCTGAA+GGG 0.589330 4.2:-70401108 None:intergenic
CAAGGTTTGCAAATGATGGC+TGG 0.590167 4.2:-70400747 None:intergenic
AAAATAGAACTTGTGCACTT+GGG 0.592735 4.2:+70400472 MS.gene93889:CDS
ATTCATTTCATTGGCCTTGG+GGG 0.593140 4.2:+70400449 MS.gene93889:CDS
TGGCTTCAAGTAATGTCTGA+AGG 0.595328 4.2:-70401109 None:intergenic
GTTAAGCCATGTAATCAGCA+TGG 0.597292 4.2:+70401055 MS.gene93889:CDS
TTAAGCCATGTAATCAGCAT+GGG 0.600925 4.2:+70401056 MS.gene93889:CDS
GAAGAGAACAAAATTGGCGT+CGG 0.618413 4.2:+70401146 MS.gene93889:CDS
GATGGTGATTTGGATTGTTG+GGG 0.620712 4.2:+70400396 MS.gene93889:CDS
TTACAAGTATTGCAAAGGAA+CGG 0.622194 4.2:+70400932 MS.gene93889:CDS
GTTAATGAACCAAAGAATGG+TGG 0.625818 4.2:+70400321 MS.gene93889:CDS
AGTGGGAATTCCCATGTCTG+TGG 0.627145 4.2:+70400120 MS.gene93889:CDS
GTAATCAGCATGGGAAATGG+AGG 0.630636 4.2:+70401065 MS.gene93889:CDS
TGAGACGGTGGATTCGAAGG+TGG 0.638718 4.2:-70400798 None:intergenic
AAAAGACAGGACTAGTAACA+AGG 0.654789 4.2:-70400904 None:intergenic
TTTAACGAGTCCACAGACAT+GGG 0.655718 4.2:-70400130 None:intergenic
GGACTCGTTAAAGGGAACAA+TGG 0.655845 4.2:+70400141 MS.gene93889:CDS
TTATCGAGGATATCGATAGT+GGG 0.656464 4.2:+70400103 MS.gene93889:CDS
GAATCTGATAAAGGTCCACA+TGG 0.660438 4.2:-70400705 None:intergenic
ATATCATGGACCCGTTATCG+AGG 0.662614 4.2:+70400089 MS.gene93889:CDS
TGGTTGGTGAGAAACCAAAA+GGG 0.673563 4.2:+70400424 MS.gene93889:CDS
AGAATCGCATGGTTAGCTCG+AGG 0.704289 4.2:-70401023 None:intergenic
ATTTCAATTCAAGCTCCGGG+AGG 0.709757 4.2:+70400193 MS.gene93889:CDS
TGTAAGAATCAATGTCCATG+TGG 0.712495 4.2:+70400690 MS.gene93889:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTATTCATTGTTTTGTT+GGG + chr4.2:70400614-70400633 MS.gene93889:intron 15.0%
!!! AATTATTCATTGTTTTGTTG+GGG + chr4.2:70400615-70400634 MS.gene93889:intron 20.0%
!!! CTAATTATTCATTGTTTTGT+TGG + chr4.2:70400613-70400632 MS.gene93889:intron 20.0%
! AATTATTCTGTTATTGAAGC+TGG + chr4.2:70400345-70400364 MS.gene93889:CDS 25.0%
!! AATGATGGAATTTCAAATGA+TGG - chr4.2:70400777-70400796 None:intergenic 25.0%
!! TCAACTTCTAATGCAAATTT+TGG + chr4.2:70401248-70401267 MS.gene93889:CDS 25.0%
!!! AATGTGTTTTTTAGTGTCAA+TGG - chr4.2:70400543-70400562 None:intergenic 25.0%
!!! GCTAAAAAAAGTGTTTTTTG+TGG + chr4.2:70400579-70400598 MS.gene93889:intron 25.0%
AAAAGGGAGATTCATTTCAT+TGG + chr4.2:70400440-70400459 MS.gene93889:CDS 30.0%
AAAATAGAACTTGTGCACTT+GGG + chr4.2:70400472-70400491 MS.gene93889:CDS 30.0%
ACTTGTAAAGGAAAAAAGAC+AGG - chr4.2:70400920-70400939 None:intergenic 30.0%
AGCTTACTAGAATCTGATAA+AGG - chr4.2:70400717-70400736 None:intergenic 30.0%
CATGAACATGTCAAAAATTG+CGG + chr4.2:70400218-70400237 MS.gene93889:CDS 30.0%
GAATAATTTCCACCATTCTT+TGG - chr4.2:70400333-70400352 None:intergenic 30.0%
GGCTATTAGAAAATGGAAAT+GGG + chr4.2:70400262-70400281 MS.gene93889:CDS 30.0%
GTTGTTAATGAACCAAAGAA+TGG + chr4.2:70400318-70400337 MS.gene93889:CDS 30.0%
TCCATGATATAGTCGTTTAA+AGG - chr4.2:70400079-70400098 None:intergenic 30.0%
TCCTTTAAACGACTATATCA+TGG + chr4.2:70400075-70400094 MS.gene93889:CDS 30.0%
TTCCTTTGCAATACTTGTAA+AGG - chr4.2:70400932-70400951 None:intergenic 30.0%
! AATGAAATGAATCTCCCTTT+TGG - chr4.2:70400441-70400460 None:intergenic 30.0%
! ATGATGGAATTGTTACTTGT+TGG + chr4.2:70400496-70400515 MS.gene93889:CDS 30.0%
! ATTTCAAATGATGGTGAACA+AGG - chr4.2:70400768-70400787 None:intergenic 30.0%
! TATCACAAATGATGGTGATT+TGG + chr4.2:70400386-70400405 MS.gene93889:CDS 30.0%
! TGATGGAATTGTTACTTGTT+GGG + chr4.2:70400497-70400516 MS.gene93889:CDS 30.0%
! TTACAAGTATTGCAAAGGAA+CGG + chr4.2:70400932-70400951 MS.gene93889:CDS 30.0%
! TTCCTTTACAAGTATTGCAA+AGG + chr4.2:70400927-70400946 MS.gene93889:CDS 30.0%
! TTCTCTGAAGAGAACAAAAT+TGG + chr4.2:70401140-70401159 MS.gene93889:CDS 30.0%
!! AATGTTGCATTTCTAGTAGT+TGG + chr4.2:70400864-70400883 MS.gene93889:CDS 30.0%
!!! CACATTTTTTGAGTCAATTG+TGG + chr4.2:70400557-70400576 MS.gene93889:intron 30.0%
AACATGTCAAAAATTGCGGT+GGG + chr4.2:70400222-70400241 MS.gene93889:CDS 35.0%
AAGGGAAATTTCCTCCAAAA+GGG - chr4.2:70401093-70401112 None:intergenic 35.0%
ACTATCGATATCCTCGATAA+CGG - chr4.2:70400103-70400122 None:intergenic 35.0%
AGAGATTTCAATTCAAGCTC+CGG + chr4.2:70400189-70400208 MS.gene93889:CDS 35.0%
GAAAATAGAACTTGTGCACT+TGG + chr4.2:70400471-70400490 MS.gene93889:CDS 35.0%
GGGCTATTAGAAAATGGAAA+TGG + chr4.2:70400261-70400280 MS.gene93889:CDS 35.0%
GTTAATGAACCAAAGAATGG+TGG + chr4.2:70400321-70400340 MS.gene93889:CDS 35.0%
GTTCTCTTCAGAGAAATTGT+TGG - chr4.2:70401135-70401154 None:intergenic 35.0%
GTTTGTGCTATCACAAATGA+TGG + chr4.2:70400378-70400397 MS.gene93889:CDS 35.0%
TATCGTGCAAAACTTGAAGA+TGG + chr4.2:70401185-70401204 MS.gene93889:CDS 35.0%
TATCTGTGTCTTCTTGTCTT+TGG - chr4.2:70401279-70401298 None:intergenic 35.0%
TGAACAAGGTTTGCAAATGA+TGG - chr4.2:70400754-70400773 None:intergenic 35.0%
TGTAAGAATCAATGTCCATG+TGG + chr4.2:70400690-70400709 MS.gene93889:CDS 35.0%
TTAAGCCATGTAATCAGCAT+GGG + chr4.2:70401056-70401075 MS.gene93889:CDS 35.0%
TTATCGAGGATATCGATAGT+GGG + chr4.2:70400103-70400122 MS.gene93889:CDS 35.0%
! AAAAGACAGGACTAGTAACA+AGG - chr4.2:70400907-70400926 None:intergenic 35.0%
! ATGATGGTGATTTGGATTGT+TGG + chr4.2:70400394-70400413 MS.gene93889:CDS 35.0%
! GATGGAATTGTTACTTGTTG+GGG + chr4.2:70400498-70400517 MS.gene93889:CDS 35.0%
! GTATGTGGGCTATTAGAAAA+TGG + chr4.2:70400255-70400274 MS.gene93889:CDS 35.0%
! TGATGGTGATTTGGATTGTT+GGG + chr4.2:70400395-70400414 MS.gene93889:CDS 35.0%
! TGGGAGAGAATTTTGTATGT+GGG + chr4.2:70400241-70400260 MS.gene93889:CDS 35.0%
! TTTCTAGTAGTTGGATGTGT+TGG + chr4.2:70400873-70400892 MS.gene93889:CDS 35.0%
!! ACCACTTTTCGATGCATTTT+CGG - chr4.2:70400829-70400848 None:intergenic 35.0%
!! AGATTCATTTCATTGGCCTT+GGG + chr4.2:70400447-70400466 MS.gene93889:CDS 35.0%
!! CATGGACATTGATTCTTACA+AGG - chr4.2:70400690-70400709 None:intergenic 35.0%
!!! GTTTTTTAGTGTCAATGGCA+TGG - chr4.2:70400538-70400557 None:intergenic 35.0%
ATGCATCGAAAAGTGGTACA+TGG + chr4.2:70400832-70400851 MS.gene93889:CDS 40.0%
ATGTCTGTGGACTCGTTAAA+GGG + chr4.2:70400133-70400152 MS.gene93889:CDS 40.0%
CATGTAATCAGCATGGGAAA+TGG + chr4.2:70401062-70401081 MS.gene93889:CDS 40.0%
CTATCGATATCCTCGATAAC+GGG - chr4.2:70400102-70400121 None:intergenic 40.0%
CTCTTCAGAGAAATTGTTGG+TGG - chr4.2:70401132-70401151 None:intergenic 40.0%
GAACATGTCAAAAATTGCGG+TGG + chr4.2:70400221-70400240 MS.gene93889:CDS 40.0%
GAAGAGAACAAAATTGGCGT+CGG + chr4.2:70401146-70401165 MS.gene93889:CDS 40.0%
GAAGGGAAATTTCCTCCAAA+AGG - chr4.2:70401094-70401113 None:intergenic 40.0%
GAATCTGATAAAGGTCCACA+TGG - chr4.2:70400708-70400727 None:intergenic 40.0%
GAGATTTCAATTCAAGCTCC+GGG + chr4.2:70400190-70400209 MS.gene93889:CDS 40.0%
GGCTTCAAGTAATGTCTGAA+GGG - chr4.2:70401111-70401130 None:intergenic 40.0%
GTTAAGCCATGTAATCAGCA+TGG + chr4.2:70401055-70401074 MS.gene93889:CDS 40.0%
GTTATCGAGGATATCGATAG+TGG + chr4.2:70400102-70400121 MS.gene93889:CDS 40.0%
TCTAGTAGAGTTCATGACTC+TGG + chr4.2:70400963-70400982 MS.gene93889:CDS 40.0%
TGGCTTCAAGTAATGTCTGA+AGG - chr4.2:70401112-70401131 None:intergenic 40.0%
TTTAACGAGTCCACAGACAT+GGG - chr4.2:70400133-70400152 None:intergenic 40.0%
TTTGGATTGTTGGGGTGATA+TGG + chr4.2:70400404-70400423 MS.gene93889:CDS 40.0%
! ACAAGTTCTATTTTCCCCCA+AGG - chr4.2:70400466-70400485 None:intergenic 40.0%
! CATTTCCCATGCTGATTACA+TGG - chr4.2:70401064-70401083 None:intergenic 40.0%
! GAGATTCATTTCATTGGCCT+TGG + chr4.2:70400446-70400465 MS.gene93889:CDS 40.0%
! GATGGTGATTTGGATTGTTG+GGG + chr4.2:70400396-70400415 MS.gene93889:CDS 40.0%
! GGGAATGTTGTTACTTGCAA+AGG + chr4.2:70400282-70400301 MS.gene93889:CDS 40.0%
! GTGGGAGAGAATTTTGTATG+TGG + chr4.2:70400240-70400259 MS.gene93889:CDS 40.0%
!! ATGGTTGGTGAGAAACCAAA+AGG + chr4.2:70400423-70400442 MS.gene93889:CDS 40.0%
!! ATTCATTTCATTGGCCTTGG+GGG + chr4.2:70400449-70400468 MS.gene93889:CDS 40.0%
!! CATTGATTCTTACAAGGTCC+TGG - chr4.2:70400684-70400703 None:intergenic 40.0%
!! CCACTTTTCGATGCATTTTC+GGG - chr4.2:70400828-70400847 None:intergenic 40.0%
!! GATTCATTTCATTGGCCTTG+GGG + chr4.2:70400448-70400467 MS.gene93889:CDS 40.0%
!! GTCTTTGATAATGTGCTTCC+AGG + chr4.2:70400663-70400682 MS.gene93889:intron 40.0%
!! TGGTTGGTGAGAAACCAAAA+GGG + chr4.2:70400424-70400443 MS.gene93889:CDS 40.0%
ACTTGTGCACTTGGGTATGA+TGG + chr4.2:70400480-70400499 MS.gene93889:CDS 45.0%
ATATCATGGACCCGTTATCG+AGG + chr4.2:70400089-70400108 MS.gene93889:CDS 45.0%
ATTTCAATTCAAGCTCCGGG+AGG + chr4.2:70400193-70400212 MS.gene93889:CDS 45.0%
CAAGGTTTGCAAATGATGGC+TGG - chr4.2:70400750-70400769 None:intergenic 45.0%
CATGTCTGTGGACTCGTTAA+AGG + chr4.2:70400132-70400151 MS.gene93889:CDS 45.0%
CCCGAAAATGCATCGAAAAG+TGG + chr4.2:70400825-70400844 MS.gene93889:CDS 45.0%
CTTTAACGAGTCCACAGACA+TGG - chr4.2:70400134-70400153 None:intergenic 45.0%
GATTGTTGGGGTGATATGGT+TGG + chr4.2:70400408-70400427 MS.gene93889:CDS 45.0%
GGACTCGTTAAAGGGAACAA+TGG + chr4.2:70400141-70400160 MS.gene93889:CDS 45.0%
GTAATCAGCATGGGAAATGG+AGG + chr4.2:70401065-70401084 MS.gene93889:CDS 45.0%
TGACATGTTCATGTTCCTCC+CGG - chr4.2:70400211-70400230 None:intergenic 45.0%
! ATTTGAGACGGTGGATTCGA+AGG - chr4.2:70400804-70400823 None:intergenic 45.0%
! GGATTCGAAGGTGGTAATGA+TGG - chr4.2:70400792-70400811 None:intergenic 45.0%
!! AAAATTGGCGTCGGTAGCTT+TGG + chr4.2:70401155-70401174 MS.gene93889:CDS 45.0%
!! GCATTTTCGGGCATTTGAGA+CGG - chr4.2:70400816-70400835 None:intergenic 45.0%
!!! AAATGGAGGTACCCTTTTGG+AGG + chr4.2:70401079-70401098 MS.gene93889:CDS 45.0%
ACCATGCGATTCTCGAGAAG+AGG + chr4.2:70401033-70401052 MS.gene93889:CDS 50.0%
ACCTCTTCTCGAGAATCGCA+TGG - chr4.2:70401037-70401056 None:intergenic 50.0%
AGTGGGAATTCCCATGTCTG+TGG + chr4.2:70400120-70400139 MS.gene93889:CDS 50.0%
! AGAATCGCATGGTTAGCTCG+AGG - chr4.2:70401026-70401045 None:intergenic 50.0%
! ATGGTTTTCGCCTCGAGTGT+TGG + chr4.2:70400160-70400179 MS.gene93889:CDS 50.0%
!! TTTTCGGGCATTTGAGACGG+TGG - chr4.2:70400813-70400832 None:intergenic 50.0%
!!! GGGAAATGGAGGTACCCTTT+TGG + chr4.2:70401076-70401095 MS.gene93889:CDS 50.0%
CTCTCCATTGCCAACACTCG+AGG - chr4.2:70400173-70400192 None:intergenic 55.0%
! TGAGACGGTGGATTCGAAGG+TGG - chr4.2:70400801-70400820 None:intergenic 55.0%
!! TGGCGTCGGTAGCTTTGGTT+CGG + chr4.2:70401160-70401179 MS.gene93889:CDS 55.0%
!! TTCGCCTCGAGTGTTGGCAA+TGG + chr4.2:70400166-70400185 MS.gene93889:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 70400041 70401310 70400041 ID=MS.gene93889
chr4.2 mRNA 70400041 70401310 70400041 ID=MS.gene93889.t1;Parent=MS.gene93889
chr4.2 exon 70400041 70400519 70400041 ID=MS.gene93889.t1.exon1;Parent=MS.gene93889.t1
chr4.2 CDS 70400041 70400519 70400041 ID=cds.MS.gene93889.t1;Parent=MS.gene93889.t1
chr4.2 exon 70400685 70401310 70400685 ID=MS.gene93889.t1.exon2;Parent=MS.gene93889.t1
chr4.2 CDS 70400685 70401310 70400685 ID=cds.MS.gene93889.t1;Parent=MS.gene93889.t1
Gene Sequence

>MS.gene93889

ATTTTCTCAATCTTCAAATTCAATTACTATTGCTTCCTTTAAACGACTATATCATGGACCCGTTATCGAGGATATCGATAGTGGGAATTCCCATGTCTGTGGACTCGTTAAAGGGAACAATGGTTTTCGCCTCGAGTGTTGGCAATGGAGAGATTTCAATTCAAGCTCCGGGAGGAACATGAACATGTCAAAAATTGCGGTGGGAGAGAATTTTGTATGTGGGCTATTAGAAAATGGAAATGGGAATGTTGTTACTTGCAAAGGAAGTAACAATAGAGTTGTTAATGAACCAAAGAATGGTGGAAATTATTCTGTTATTGAAGCTGGTTCAAATCATGTTTGTGCTATCACAAATGATGGTGATTTGGATTGTTGGGGTGATATGGTTGGTGAGAAACCAAAAGGGAGATTCATTTCATTGGCCTTGGGGGAAAATAGAACTTGTGCACTTGGGTATGATGGAATTGTTACTTGTTGGGGTTTGAATAATTTCACCATGCCATTGACACTAAAAAACACATTTTTTGAGTCAATTGTGGCTAAAAAAAGTGTTTTTTGTGGTGTTTTGTCTTCTAATTATTCATTGTTTTGTTGGGGCAATGAAGTTTTTGAGTCAAAAAAAGTCTTTGATAATGTGCTTCCAGGACCTTGTAAGAATCAATGTCCATGTGGACCTTTATCAGATTCTAGTAAGCTTTGTGTCTCACCAGCCATCATTTGCAAACCTTGTTCACCATCATTTGAAATTCCATCATTACCACCTTCGAATCCACCGTCTCAAATGCCCGAAAATGCATCGAAAAGTGGTACATGGAGCAACAAAAATGTTGCATTTCTAGTAGTTGGATGTGTTGGCTGCACTTCCTTGTTACTAGTCCTGTCTTTTTTCCTTTACAAGTATTGCAAAGGAACGGCGTGCAAATCTAGTAGAGTTCATGACTCTGGAAGACTAGATGATCTCGATCGTGAAAACGAATCACAACCTCGAGCTAACCATGCGATTCTCGAGAAGAGGTTAAGCCATGTAATCAGCATGGGAAATGGAGGTACCCTTTTGGAGGAAATTTCCCTTCAGACATTACTTGAAGCCACCAACAATTTCTCTGAAGAGAACAAAATTGGCGTCGGTAGCTTTGGTTCGGTGTATCGTGCAAAACTTGAAGATGGAAAAGAAGTTGCTATAAAAAGAGCTGAAATTTCATCAACTTCAACTTCTAATGCAAATTTTGGCGTCACCAAAGACAAGAAGACACAGATAGTGCATTTGTGA
Protein sequence

>MS.gene93889.t1

IFSIFKFNYYCFLUTTISWTRYRGYRUWEFPCLWTRUREQWFSPRVLAMERFQFKLREEHEHVKNCGGREFCMWAIRKWKWECCYLQRKUQUSCUUTKEWWKLFCYUSWFKSCLCYHKUWUFGLLGUYGWUETKREIHFIGLGGKUNLCTWVUWNCYLLGTLUESMSMWTFIRFUUALCLTSHHLQTLFTIIUNSIITTFESTVSNARKCIEKWYMEQQKCCISSSWMCWLHFLVTSPVFFPLQVLQRNGVQIUUSSULWKTRUSRSUKRITTSSUPCDSREEVKPCNQHGKWRYPFGGNFPSDITUSHQQFLUREQNWRRULWFGVSCKTURWKRSCYKKSUNFINFNFUCKFWRHQRQEDTDSAFV