Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94069.t1 | XP_003614714.1 | 95.2 | 252 | 12 | 0 | 1 | 252 | 1 | 252 | 1.20E-110 | 409.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94069.t1 | B6K8A0 | 35.3 | 170 | 109 | 1 | 77 | 246 | 115 | 283 | 4.3e-21 | 103.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94069.t1 | G7JXB6 | 95.2 | 252 | 12 | 0 | 1 | 252 | 1 | 252 | 8.4e-111 | 409.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073734 | MS.gene94069 | PPI |
| MS.gene64804 | MS.gene94069 | PPI |
| MS.gene59503 | MS.gene94069 | PPI |
| MS.gene94069 | MS.gene035486 | PPI |
| MS.gene94069 | MS.gene67483 | PPI |
| MS.gene040757 | MS.gene94069 | PPI |
| MS.gene94069 | MS.gene93333 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94069.t1 | MTR_5g058150 | 96.032 | 252 | 10 | 0 | 1 | 252 | 1 | 252 | 4.86e-161 | 446 |
| MS.gene94069.t1 | MTR_6g075250 | 74.104 | 251 | 62 | 3 | 1 | 250 | 1 | 249 | 7.70e-121 | 345 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94069.t1 | AT1G12650 | 58.209 | 201 | 81 | 2 | 52 | 249 | 48 | 248 | 1.90e-69 | 214 |
| MS.gene94069.t1 | AT1G12650 | 58.209 | 201 | 81 | 2 | 52 | 249 | 48 | 248 | 1.90e-69 | 214 |
| MS.gene94069.t1 | AT1G12650 | 58.209 | 201 | 81 | 2 | 52 | 249 | 48 | 248 | 1.90e-69 | 214 |
| MS.gene94069.t1 | AT1G12650 | 58.209 | 201 | 81 | 2 | 52 | 249 | 48 | 248 | 1.90e-69 | 214 |
Find 43 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTTCTTGAGATAAA+AGG | 0.164847 | 5.4:-45851047 | None:intergenic |
| GAATATTGAGACACAGATTT+TGG | 0.225799 | 5.4:+45850976 | MS.gene94069:CDS |
| ACAATTAATCTGACCTTCTT+AGG | 0.235824 | 5.4:-45848704 | None:intergenic |
| CAGAAGATAAGAAGTTAAAA+AGG | 0.271638 | 5.4:+45847691 | MS.gene94069:CDS |
| TGGGTTTCATCGGTGGAATT+TGG | 0.278902 | 5.4:-45847422 | None:intergenic |
| TGGCATAACAGGCTCTTAAA+AGG | 0.329338 | 5.4:+45850774 | MS.gene94069:intron |
| GGGTTTCATCGGTGGAATTT+GGG | 0.333171 | 5.4:-45847421 | None:intergenic |
| TTTCAACAAGCCTTTGCTTC+CGG | 0.346969 | 5.4:-45852491 | None:intergenic |
| TACGATATGGCATGAATCTA+TGG | 0.372533 | 5.4:-45852695 | None:intergenic |
| AGAGAGAGAAGCAGCAAAGC+AGG | 0.383818 | 5.4:+45851015 | MS.gene94069:CDS |
| TTTAACTTCTTATCTTCTGC+AGG | 0.387171 | 5.4:-45847687 | None:intergenic |
| TCTATTTCATTTCTACGCTC+TGG | 0.399432 | 5.4:-45850818 | None:intergenic |
| CCACGATTTGAGTCTCTTTG+CGG | 0.402540 | 5.4:+45849161 | MS.gene94069:CDS |
| TTCTTGCTACTAGCTTCCAT+TGG | 0.435250 | 5.4:-45848647 | None:intergenic |
| TTACATTTCTTGAGATAAAA+GGG | 0.436036 | 5.4:-45851046 | None:intergenic |
| TGCAGAAAGCTCGATCGAAT+GGG | 0.447640 | 5.4:+45847643 | MS.gene94069:CDS |
| TTCATGCCATATCGTAGATC+TGG | 0.465483 | 5.4:+45852702 | MS.gene94069:CDS |
| CTCCTCGTAGTGGGTTTCAT+CGG | 0.469489 | 5.4:-45847432 | None:intergenic |
| ACATCTCTAAAAGCAGGAAC+TGG | 0.493887 | 5.4:-45848671 | None:intergenic |
| GCGGTACATTTGACAATGAT+CGG | 0.498086 | 5.4:+45849180 | MS.gene94069:CDS |
| AAGCCTTTGCTTCCGGATCT+CGG | 0.499116 | 5.4:-45852484 | None:intergenic |
| TGATCTTCCTGCTGAAAGAC+AGG | 0.502469 | 5.4:+45850673 | MS.gene94069:CDS |
| TCTGGTGAAAACGTGGAGTA+AGG | 0.502921 | 5.4:+45852720 | MS.gene94069:CDS |
| TTGCAGAAAGCTCGATCGAA+TGG | 0.509933 | 5.4:+45847642 | MS.gene94069:CDS |
| CAGCCGAGATCCGGAAGCAA+AGG | 0.510746 | 5.4:+45852481 | MS.gene94069:intron |
| GCTAGCTGATGTAACATTCG+AGG | 0.511133 | 5.4:+45847617 | MS.gene94069:CDS |
| AGTTTCATTCTCCTCGTAGT+GGG | 0.519416 | 5.4:-45847441 | None:intergenic |
| CAGTTTCATTCTCCTCGTAG+TGG | 0.524074 | 5.4:-45847442 | None:intergenic |
| CTCGTAGTGGGTTTCATCGG+TGG | 0.528306 | 5.4:-45847429 | None:intergenic |
| GAGAGAGAAGCAGCAAAGCA+GGG | 0.548569 | 5.4:+45851016 | MS.gene94069:CDS |
| TGAATGACATCTCTAAAAGC+AGG | 0.560062 | 5.4:-45848677 | None:intergenic |
| CTACCTACCTGTCTTTCAGC+AGG | 0.562589 | 5.4:-45850680 | None:intergenic |
| TGTCATTCAAGCTCCTAAGA+AGG | 0.563312 | 5.4:+45848691 | MS.gene94069:CDS |
| AAATAGAAGAGCGCATAGCA+TGG | 0.572976 | 5.4:+45850834 | MS.gene94069:CDS |
| GCTTACATCTTCTGATGAGG+AGG | 0.581067 | 5.4:-45847483 | None:intergenic |
| GAGGAAGAGAAATGCTGCAA+AGG | 0.582512 | 5.4:+45852671 | MS.gene94069:CDS |
| GTTGCTTACATCTTCTGATG+AGG | 0.595546 | 5.4:-45847486 | None:intergenic |
| AATAGAAGAGCGCATAGCAT+GGG | 0.609808 | 5.4:+45850835 | MS.gene94069:CDS |
| TCGTAGATCTGGTGAAAACG+TGG | 0.638393 | 5.4:+45852713 | MS.gene94069:CDS |
| CCGCAAAGAGACTCAAATCG+TGG | 0.650639 | 5.4:-45849161 | None:intergenic |
| GCAGAAAGCTCGATCGAATG+GGG | 0.651683 | 5.4:+45847644 | MS.gene94069:CDS |
| TTTCTCAAAATGAACAAACA+CGG | 0.662906 | 5.4:+45847389 | None:intergenic |
| CACCGATGAAACCCACTACG+AGG | 0.695491 | 5.4:+45847430 | MS.gene94069:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTCAATTAAAAGAA+TGG | + | chr5.4:45852256-45852275 | MS.gene94069:intron | 10.0% |
| !! | ATAGTAAATAGATAAAATTA+AGG | - | chr5.4:45852610-45852629 | None:intergenic | 10.0% |
| !! | TAGTAAATAGATAAAATTAA+GGG | - | chr5.4:45852609-45852628 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTTGATTATTGT+AGG | + | chr5.4:45847569-45847588 | MS.gene94069:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850193-45850212 | MS.gene94069:intron | 100.0% |
| !! | ATAAAATAAAATTCCAACTA+TGG | + | chr5.4:45852432-45852451 | MS.gene94069:intron | 15.0% |
| !! | ATACTAAATTATTATAACCT+AGG | - | chr5.4:45847535-45847554 | None:intergenic | 15.0% |
| !! | AAATTAACACAACAAGAAAA+AGG | - | chr5.4:45849238-45849257 | None:intergenic | 20.0% |
| !! | AAATTATCATTATCCATAGT+TGG | - | chr5.4:45852448-45852467 | None:intergenic | 20.0% |
| !! | AATCATATATTGAGAAAAAG+AGG | + | chr5.4:45852652-45852671 | MS.gene94069:CDS | 20.0% |
| !! | ACTAATAAAAATTACACCTT+TGG | - | chr5.4:45850897-45850916 | None:intergenic | 20.0% |
| !! | ACTTAAAAAATGTACAAGTA+AGG | + | chr5.4:45849014-45849033 | MS.gene94069:intron | 20.0% |
| !! | AGAAGATAAGAAGTTAAAAA+GGG | + | chr5.4:45847692-45847711 | MS.gene94069:CDS | 20.0% |
| !! | CTAATAATAATACATGTACT+TGG | + | chr5.4:45850609-45850628 | MS.gene94069:intron | 20.0% |
| !! | CTTAAAAAATGTACAAGTAA+GGG | + | chr5.4:45849015-45849034 | MS.gene94069:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+CGG | - | chr5.4:45848016-45848035 | None:intergenic | 20.0% |
| !! | TCATTGAACTTATGAAATTA+GGG | + | chr5.4:45847903-45847922 | MS.gene94069:intron | 20.0% |
| !! | TGAAAAATTTAATCATCTCA+AGG | + | chr5.4:45852509-45852528 | MS.gene94069:CDS | 20.0% |
| !! | TTACATTTCTTGAGATAAAA+GGG | - | chr5.4:45851049-45851068 | None:intergenic | 20.0% |
| !!! | ACTAATTTTACATATGATAG+CGG | - | chr5.4:45848986-45849005 | None:intergenic | 20.0% |
| !!! | CAATTTCTGTTTTATATATC+TGG | + | chr5.4:45849085-45849104 | MS.gene94069:intron | 20.0% |
| !!! | CTATGGATAATGATAATTTT+TGG | + | chr5.4:45852449-45852468 | MS.gene94069:intron | 20.0% |
| !!! | TACTTTTCGTTTTTAAATTG+TGG | + | chr5.4:45851737-45851756 | MS.gene94069:intron | 20.0% |
| !!! | TATTGAATGTCTCATATTTT+AGG | - | chr5.4:45851204-45851223 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTATCATTTTGTA+AGG | - | chr5.4:45849554-45849573 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATTATTGTAGG+AGG | + | chr5.4:45847572-45847591 | MS.gene94069:intron | 20.0% |
| !!! | TTGACTTATTTTTAAGCTTA+TGG | + | chr5.4:45848022-45848041 | MS.gene94069:intron | 20.0% |
| ! | AAAAAAACTACACAAGCTAA+TGG | - | chr5.4:45848836-45848855 | None:intergenic | 25.0% |
| ! | AAAAAGAATAACCAATGACA+GGG | - | chr5.4:45849593-45849612 | None:intergenic | 25.0% |
| ! | AAACCTAAAAATGAGCTTAA+GGG | + | chr5.4:45852097-45852116 | MS.gene94069:intron | 25.0% |
| ! | AAAGAATAGTACATTGAGTT+GGG | - | chr5.4:45849634-45849653 | None:intergenic | 25.0% |
| ! | AAATACAGCAAAAATCAACA+TGG | - | chr5.4:45849332-45849351 | None:intergenic | 25.0% |
| ! | AACTTATGAAAACAGCTTAT+GGG | + | chr5.4:45847989-45848008 | MS.gene94069:intron | 25.0% |
| ! | AATATGAGACATTCAATATG+CGG | + | chr5.4:45851206-45851225 | MS.gene94069:intron | 25.0% |
| ! | AATTCATCAAATGTTAACCT+AGG | + | chr5.4:45847515-45847534 | MS.gene94069:intron | 25.0% |
| ! | ACAGTATTTCTTAAATACAG+TGG | - | chr5.4:45849735-45849754 | None:intergenic | 25.0% |
| ! | AGATAGTTCCATATAATTCT+TGG | + | chr5.4:45850002-45850021 | MS.gene94069:intron | 25.0% |
| ! | AGATTGTACTTCTAACATAT+CGG | - | chr5.4:45851118-45851137 | None:intergenic | 25.0% |
| ! | ATAAAAATTACACCTTTGGA+AGG | - | chr5.4:45850893-45850912 | None:intergenic | 25.0% |
| ! | ATAGTTACCTCTTAATGAAT+AGG | + | chr5.4:45851552-45851571 | MS.gene94069:intron | 25.0% |
| ! | ATTTCTTAAATACAGTGGAT+TGG | - | chr5.4:45849730-45849749 | None:intergenic | 25.0% |
| ! | CAGAAGATAAGAAGTTAAAA+AGG | + | chr5.4:45847691-45847710 | MS.gene94069:CDS | 25.0% |
| ! | CTCATTGAACTTATGAAATT+AGG | + | chr5.4:45847902-45847921 | MS.gene94069:intron | 25.0% |
| ! | CTTACATTTCTTGAGATAAA+AGG | - | chr5.4:45851050-45851069 | None:intergenic | 25.0% |
| ! | GTAAGGATTAATTTCAATCT+TGG | - | chr5.4:45849537-45849556 | None:intergenic | 25.0% |
| ! | GTATTATTATTAGTGCTACA+CGG | - | chr5.4:45850602-45850621 | None:intergenic | 25.0% |
| ! | TAAACCTAAAAATGAGCTTA+AGG | + | chr5.4:45852096-45852115 | MS.gene94069:intron | 25.0% |
| ! | TAAAGAATAGTACATTGAGT+TGG | - | chr5.4:45849635-45849654 | None:intergenic | 25.0% |
| ! | TAATTTCAATCTTGGACTAT+GGG | - | chr5.4:45849529-45849548 | None:intergenic | 25.0% |
| ! | TACAACCTGAAAAATAATGA+AGG | - | chr5.4:45849135-45849154 | None:intergenic | 25.0% |
| ! | TCTCATTCACATGTTTATAT+GGG | + | chr5.4:45852314-45852333 | MS.gene94069:intron | 25.0% |
| ! | TGTAGAAACCAAGAATTATA+TGG | - | chr5.4:45850013-45850032 | None:intergenic | 25.0% |
| ! | TTAATTTCAATCTTGGACTA+TGG | - | chr5.4:45849530-45849549 | None:intergenic | 25.0% |
| ! | TTATATGGGGAAATAGTTAT+CGG | + | chr5.4:45852328-45852347 | MS.gene94069:intron | 25.0% |
| !! | ATGATTTCCCAATTTTTACT+AGG | + | chr5.4:45848624-45848643 | MS.gene94069:intron | 25.0% |
| !! | ATTTACTATTTTCAGTCATC+TGG | + | chr5.4:45852621-45852640 | MS.gene94069:intron | 25.0% |
| !! | TAAAAATTACACCTTTGGAA+GGG | - | chr5.4:45850892-45850911 | None:intergenic | 25.0% |
| !! | TCATATGTTTTCAGATTGTT+TGG | - | chr5.4:45848446-45848465 | None:intergenic | 25.0% |
| !! | TTATGAAATTAGGGTTTGTT+TGG | + | chr5.4:45847912-45847931 | MS.gene94069:intron | 25.0% |
| !! | TTTGTGTTCTTTTTCTACAT+TGG | + | chr5.4:45851944-45851963 | MS.gene94069:intron | 25.0% |
| !!! | AAAAGAATGGACTATATTGT+TGG | + | chr5.4:45852269-45852288 | MS.gene94069:intron | 25.0% |
| !!! | ATTAGCTTGTGTAGTTTTTT+TGG | + | chr5.4:45848835-45848854 | MS.gene94069:intron | 25.0% |
| !!! | ATTGGCTTAATTTTAGCATA+TGG | - | chr5.4:45848190-45848209 | None:intergenic | 25.0% |
| !!! | TATAATTTTTTCCCTGTCAT+TGG | + | chr5.4:45849579-45849598 | MS.gene94069:intron | 25.0% |
| !!! | TCATTTTTAGGTTTATTCCT+AGG | - | chr5.4:45852091-45852110 | None:intergenic | 25.0% |
| !!! | TTAGCTTGTGTAGTTTTTTT+GGG | + | chr5.4:45848836-45848855 | MS.gene94069:intron | 25.0% |
| AAAATTAAGCCAATCAGAAG+AGG | + | chr5.4:45848196-45848215 | MS.gene94069:intron | 30.0% | |
| AACTGTACAAGATACATCAA+AGG | - | chr5.4:45850496-45850515 | None:intergenic | 30.0% | |
| AAGCTGTTAGATAATACTGA+AGG | + | chr5.4:45849666-45849685 | MS.gene94069:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5.4:45847756-45847775 | None:intergenic | 30.0% | |
| ACAATTAATCTGACCTTCTT+AGG | - | chr5.4:45848707-45848726 | None:intergenic | 30.0% | |
| AGTTAGTAACAATGCTCAAA+AGG | - | chr5.4:45851990-45852009 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | - | chr5.4:45848449-45848430 | None:intergenic | 30.0% | |
| ATACAAAGCGGATAAAATGA+AGG | - | chr5.4:45852564-45852583 | None:intergenic | 30.0% | |
| ATACAGTTCTGTGAATATGA+AGG | + | chr5.4:45852355-45852374 | MS.gene94069:intron | 30.0% | |
| ATATCGGAAGTGATAGAAAA+GGG | - | chr5.4:45851102-45851121 | None:intergenic | 30.0% | |
| ATTTCTTTATTGTGCGAGAA+TGG | - | chr5.4:45851925-45851944 | None:intergenic | 30.0% | |
| CAGTATGACATAATACAAAG+CGG | - | chr5.4:45852576-45852595 | None:intergenic | 30.0% | |
| CATTAAGAGGTAACTATAGA+AGG | - | chr5.4:45851549-45851568 | None:intergenic | 30.0% | |
| CATTGTTACTAACTGTCTAA+GGG | + | chr5.4:45851996-45852015 | MS.gene94069:intron | 30.0% | |
| CTCATTCACATGTTTATATG+GGG | + | chr5.4:45852315-45852334 | MS.gene94069:intron | 30.0% | |
| CTCTCATTCACATGTTTATA+TGG | + | chr5.4:45852313-45852332 | MS.gene94069:intron | 30.0% | |
| CTGTGAATATGAAGGTTAAA+TGG | + | chr5.4:45852363-45852382 | MS.gene94069:intron | 30.0% | |
| CTTGTAGGTTTAATTCAGTT+GGG | + | chr5.4:45851612-45851631 | MS.gene94069:intron | 30.0% | |
| GAAAAAGAATAACCAATGAC+AGG | - | chr5.4:45849594-45849613 | None:intergenic | 30.0% | |
| GAACTTATGAAAACAGCTTA+TGG | + | chr5.4:45847988-45848007 | MS.gene94069:intron | 30.0% | |
| GGGAGATAAAATTATGTTGA+AGG | - | chr5.4:45851082-45851101 | None:intergenic | 30.0% | |
| TAAAAAGGGCTAATAAGAAC+AGG | + | chr5.4:45847706-45847725 | MS.gene94069:CDS | 30.0% | |
| TAATTATTTGAATGACAGCG+TGG | + | chr5.4:45848570-45848589 | MS.gene94069:intron | 30.0% | |
| TACAAAGCGGATAAAATGAA+GGG | - | chr5.4:45852563-45852582 | None:intergenic | 30.0% | |
| TATATGGGGAAATAGTTATC+GGG | + | chr5.4:45852329-45852348 | MS.gene94069:intron | 30.0% | |
| TCTCCTTTGATTACTCTTAA+GGG | + | chr5.4:45851670-45851689 | MS.gene94069:intron | 30.0% | |
| TGAAACTCTTTCTTACTATG+AGG | + | chr5.4:45849492-45849511 | MS.gene94069:intron | 30.0% | |
| TGCATCAAGTAATAGTTAGT+AGG | - | chr5.4:45851416-45851435 | None:intergenic | 30.0% | |
| TTACCTCTTAATGAATAGGA+GGG | + | chr5.4:45851556-45851575 | MS.gene94069:intron | 30.0% | |
| TTCTCCTTTGATTACTCTTA+AGG | + | chr5.4:45851669-45851688 | MS.gene94069:intron | 30.0% | |
| TTGAGTTACTTGAGCTTATA+TGG | + | chr5.4:45847936-45847955 | MS.gene94069:intron | 30.0% | |
| TTTCCCTGTTAAACAAATTG+CGG | + | chr5.4:45848876-45848895 | MS.gene94069:intron | 30.0% | |
| TTTCTTTATTGTGCGAGAAT+GGG | - | chr5.4:45851924-45851943 | None:intergenic | 30.0% | |
| TTTGCACACACAAGAATAAA+AGG | - | chr5.4:45848600-45848619 | None:intergenic | 30.0% | |
| ! | AAAAATTACACCTTTGGAAG+GGG | - | chr5.4:45850891-45850910 | None:intergenic | 30.0% |
| ! | AAGTTTAAGCATTTTCGTAC+CGG | + | chr5.4:45849299-45849318 | MS.gene94069:intron | 30.0% |
| ! | GAATATTGAGACACAGATTT+TGG | + | chr5.4:45850976-45850995 | MS.gene94069:CDS | 30.0% |
| ! | TTTAACTTCTTATCTTCTGC+AGG | - | chr5.4:45847690-45847709 | None:intergenic | 30.0% |
| !! | AAATCAACATGGTTTTACAC+CGG | - | chr5.4:45849321-45849340 | None:intergenic | 30.0% |
| !! | ACGCTTTTGAAAACTTTCAT+AGG | - | chr5.4:45848223-45848242 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5.4:45847963-45847982 | MS.gene94069:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5.4:45847982-45847963 | None:intergenic | 30.0% |
| !! | CGCTTTTGAAAACTTTCATA+GGG | - | chr5.4:45848222-45848241 | None:intergenic | 30.0% |
| !! | CTTGTTGGTTTAATTCAGTT+GGG | + | chr5.4:45851476-45851495 | MS.gene94069:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr5.4:45847964-45847983 | MS.gene94069:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5.4:45847983-45847964 | None:intergenic | 30.0% |
| !! | TAGAATTTTAGCGCTATTAG+TGG | - | chr5.4:45852181-45852200 | None:intergenic | 30.0% |
| !!! | TAGCTTGTGTAGTTTTTTTG+GGG | + | chr5.4:45848837-45848856 | MS.gene94069:intron | 30.0% |
| !!! | TCTGTTTTTCTGGCTTTTTT+TGG | + | chr5.4:45850352-45850371 | MS.gene94069:intron | 30.0% |
| !!! | TTCTTTTTTCTCTCCTTTTC+TGG | + | chr5.4:45850296-45850315 | MS.gene94069:intron | 30.0% |
| !!! | TTTTAACTTCAACTAAGAGC+CGG | + | chr5.4:45849392-45849411 | MS.gene94069:intron | 30.0% |
| AAACACACACCAACAACTAA+AGG | - | chr5.4:45850393-45850412 | None:intergenic | 35.0% | |
| AAGCTCTATTGCTATAGCAA+AGG | - | chr5.4:45848329-45848348 | None:intergenic | 35.0% | |
| ACAAAGCGGATAAAATGAAG+GGG | - | chr5.4:45852562-45852581 | None:intergenic | 35.0% | |
| ACACCCTTAAGAGTAATCAA+AGG | - | chr5.4:45851676-45851695 | None:intergenic | 35.0% | |
| ACTTGATGCATTAGACATGA+AGG | + | chr5.4:45851426-45851445 | MS.gene94069:intron | 35.0% | |
| AGACTGTTTGGGAAAAACAA+TGG | - | chr5.4:45848479-45848498 | None:intergenic | 35.0% | |
| AGAGAAAAAAGAACAACCAG+GGG | - | chr5.4:45850289-45850308 | None:intergenic | 35.0% | |
| AGAGTAATCAAAGGAGAAAC+TGG | - | chr5.4:45851667-45851686 | None:intergenic | 35.0% | |
| AGTAGGGACAGAAAATCTAA+GGG | - | chr5.4:45851900-45851919 | None:intergenic | 35.0% | |
| AGTTTCTTAAGTGACCTTGT+AGG | + | chr5.4:45851597-45851616 | MS.gene94069:intron | 35.0% | |
| CATATCGGAAGTGATAGAAA+AGG | - | chr5.4:45851103-45851122 | None:intergenic | 35.0% | |
| CATGCATATTACTTAGTCAG+CGG | + | chr5.4:45849948-45849967 | MS.gene94069:intron | 35.0% | |
| CCAACTGAATTAAACCAACA+AGG | - | chr5.4:45851478-45851497 | None:intergenic | 35.0% | |
| CCAACTGAATTAAACCTACA+AGG | - | chr5.4:45851614-45851633 | None:intergenic | 35.0% | |
| CCTTGTAGGTTTAATTCAGT+TGG | + | chr5.4:45851611-45851630 | MS.gene94069:intron | 35.0% | |
| GAAAGACAATCAAAATCAGC+AGG | - | chr5.4:45849815-45849834 | None:intergenic | 35.0% | |
| GAGAGAAAAAAGAACAACCA+GGG | - | chr5.4:45850290-45850309 | None:intergenic | 35.0% | |
| GCATTAGATATCCTCTGTTT+GGG | + | chr5.4:45849970-45849989 | MS.gene94069:intron | 35.0% | |
| GCATTGTTACTAACTGTCTA+AGG | + | chr5.4:45851995-45852014 | MS.gene94069:intron | 35.0% | |
| GTTACCTCTTAATGAATAGG+AGG | + | chr5.4:45851555-45851574 | MS.gene94069:intron | 35.0% | |
| TAATGTGTTAGACTATTGCC+AGG | - | chr5.4:45852044-45852063 | None:intergenic | 35.0% | |
| TACGATATGGCATGAATCTA+TGG | - | chr5.4:45852698-45852717 | None:intergenic | 35.0% | |
| TAGGTTTATTCCTAGGAGTA+TGG | - | chr5.4:45852084-45852103 | None:intergenic | 35.0% | |
| TCATATGTAGTTAAGACTCC+AGG | + | chr5.4:45848959-45848978 | MS.gene94069:intron | 35.0% | |
| TCGTTTAGGTGGATATCATT+TGG | + | chr5.4:45850041-45850060 | MS.gene94069:intron | 35.0% | |
| TCTATTTCATTTCTACGCTC+TGG | - | chr5.4:45850821-45850840 | None:intergenic | 35.0% | |
| TTAGGTGGATATCATTTGGT+TGG | + | chr5.4:45850045-45850064 | MS.gene94069:intron | 35.0% | |
| TTAGTTGTTGGTGTGTGTTT+CGG | + | chr5.4:45850393-45850412 | MS.gene94069:intron | 35.0% | |
| TTATGACTTTCCTCTCATGA+CGG | + | chr5.4:45850744-45850763 | MS.gene94069:intron | 35.0% | |
| TTCCCTGTTAAACAAATTGC+GGG | + | chr5.4:45848877-45848896 | MS.gene94069:intron | 35.0% | |
| TTCTTGCACTTATCATGAGT+GGG | + | chr5.4:45850128-45850147 | MS.gene94069:intron | 35.0% | |
| TTCTTTATTGTGCGAGAATG+GGG | - | chr5.4:45851923-45851942 | None:intergenic | 35.0% | |
| TTTATGTGAGCGTCTTATGA+CGG | + | chr5.4:45850468-45850487 | MS.gene94069:intron | 35.0% | |
| TTTGTAACTTATGCCCTGTT+TGG | + | chr5.4:45847739-45847758 | MS.gene94069:intron | 35.0% | |
| ! | AGAAAATCTAAGGGTGTGTT+TGG | - | chr5.4:45851891-45851910 | None:intergenic | 35.0% |
| ! | AGGTTTATTCCTAGGAGTAT+GGG | - | chr5.4:45852083-45852102 | None:intergenic | 35.0% |
| ! | ATCCCGCAATTTGTTTAACA+GGG | - | chr5.4:45848882-45848901 | None:intergenic | 35.0% |
| ! | ATTACTCTTAAGGGTGTGTT+TGG | + | chr5.4:45851679-45851698 | MS.gene94069:intron | 35.0% |
| ! | CCATTGGCCTAGTAAAAATT+GGG | - | chr5.4:45848634-45848653 | None:intergenic | 35.0% |
| ! | TAGCACATTGGTGATATTAG+TGG | + | chr5.4:45851310-45851329 | MS.gene94069:intron | 35.0% |
| ! | TCACGTTTACATGTCTTTTC+AGG | + | chr5.4:45850925-45850944 | MS.gene94069:intron | 35.0% |
| ! | TCCATTGGCCTAGTAAAAAT+TGG | - | chr5.4:45848635-45848654 | None:intergenic | 35.0% |
| ! | TGAATGACATCTCTAAAAGC+AGG | - | chr5.4:45848680-45848699 | None:intergenic | 35.0% |
| ! | TTCTTTTCGCCTTTAGTTGT+TGG | + | chr5.4:45850381-45850400 | MS.gene94069:intron | 35.0% |
| ! | TTTTCACCAGATCTACGATA+TGG | - | chr5.4:45852711-45852730 | None:intergenic | 35.0% |
| !! | CCTTGTTGGTTTAATTCAGT+TGG | + | chr5.4:45851475-45851494 | MS.gene94069:intron | 35.0% |
| !! | GCATGCCTTCATTATTTTTC+AGG | + | chr5.4:45849127-45849146 | MS.gene94069:intron | 35.0% |
| AAACAACACGAGATATCAGC+AGG | - | chr5.4:45848766-45848785 | None:intergenic | 40.0% | |
| AACAACACGAGATATCAGCA+GGG | - | chr5.4:45848765-45848784 | None:intergenic | 40.0% | |
| ACACCCTCCTATTCATTAAG+AGG | - | chr5.4:45851562-45851581 | None:intergenic | 40.0% | |
| ACATAGGAAGAATGTGTCGA+AGG | + | chr5.4:45849438-45849457 | MS.gene94069:intron | 40.0% | |
| AGAAAAAAGAACAACCAGGG+GGG | - | chr5.4:45850287-45850306 | None:intergenic | 40.0% | |
| AGGGGAAGACAAACTTCAAA+AGG | - | chr5.4:45850873-45850892 | None:intergenic | 40.0% | |
| AGTTTCATTCTCCTCGTAGT+GGG | - | chr5.4:45847444-45847463 | None:intergenic | 40.0% | |
| ATACATGTACTTGGACTTGC+AGG | + | chr5.4:45850618-45850637 | MS.gene94069:intron | 40.0% | |
| CAAAGCGGATAAAATGAAGG+GGG | - | chr5.4:45852561-45852580 | None:intergenic | 40.0% | |
| CCTAAAAATGAGCTTAAGGG+TGG | + | chr5.4:45852100-45852119 | MS.gene94069:intron | 40.0% | |
| GAGAAAAAAGAACAACCAGG+GGG | - | chr5.4:45850288-45850307 | None:intergenic | 40.0% | |
| GAGTAGGGACAGAAAATCTA+AGG | - | chr5.4:45851901-45851920 | None:intergenic | 40.0% | |
| GATAAGTGCAAGAACTAGCA+GGG | - | chr5.4:45850122-45850141 | None:intergenic | 40.0% | |
| GCGGTACATTTGACAATGAT+CGG | + | chr5.4:45849180-45849199 | MS.gene94069:CDS | 40.0% | |
| GGAGAGAAAAAAGAACAACC+AGG | - | chr5.4:45850291-45850310 | None:intergenic | 40.0% | |
| GGCATTAGATATCCTCTGTT+TGG | + | chr5.4:45849969-45849988 | MS.gene94069:intron | 40.0% | |
| GTTCTTGCACTTATCATGAG+TGG | + | chr5.4:45850127-45850146 | MS.gene94069:intron | 40.0% | |
| GTTGCTTACATCTTCTGATG+AGG | - | chr5.4:45847489-45847508 | None:intergenic | 40.0% | |
| TATTGCCAGGTTTCACTGTA+GGG | - | chr5.4:45852031-45852050 | None:intergenic | 40.0% | |
| TCATGCTTCAATATGTGCGT+TGG | - | chr5.4:45849875-45849894 | None:intergenic | 40.0% | |
| TGAAAGAACGTCACTTAGCT+AGG | - | chr5.4:45849369-45849388 | None:intergenic | 40.0% | |
| TGATAAGTGCAAGAACTAGC+AGG | - | chr5.4:45850123-45850142 | None:intergenic | 40.0% | |
| TGATATCCACCTAAACGACA+TGG | - | chr5.4:45850039-45850058 | None:intergenic | 40.0% | |
| TGGCATAACAGGCTCTTAAA+AGG | + | chr5.4:45850774-45850793 | MS.gene94069:intron | 40.0% | |
| TGTCATTCAAGCTCCTAAGA+AGG | + | chr5.4:45848691-45848710 | MS.gene94069:CDS | 40.0% | |
| TGTCCTCAAGAAGTCAACAT+AGG | + | chr5.4:45849422-45849441 | MS.gene94069:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr5.4:45851877-45851896 | None:intergenic | 40.0% | |
| TTCATGCCATATCGTAGATC+TGG | + | chr5.4:45852702-45852721 | MS.gene94069:CDS | 40.0% | |
| TTCTTGAGGACAGTGATAAC+CGG | - | chr5.4:45849414-45849433 | None:intergenic | 40.0% | |
| TTTCAACAAGCCTTTGCTTC+CGG | - | chr5.4:45852494-45852513 | None:intergenic | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr5.4:45851873-45851892 | None:intergenic | 40.0% | |
| ! | AAATAGAAGAGCGCATAGCA+TGG | + | chr5.4:45850834-45850853 | MS.gene94069:CDS | 40.0% |
| ! | AATAGAAGAGCGCATAGCAT+GGG | + | chr5.4:45850835-45850854 | MS.gene94069:CDS | 40.0% |
| ! | ACATCTCTAAAAGCAGGAAC+TGG | - | chr5.4:45848674-45848693 | None:intergenic | 40.0% |
| ! | ATGAATAGGAGGGTGTGTAT+CGG | + | chr5.4:45851566-45851585 | MS.gene94069:intron | 40.0% |
| ! | CCCAATTTTTACTAGGCCAA+TGG | + | chr5.4:45848631-45848650 | MS.gene94069:intron | 40.0% |
| ! | GATCCCGCAATTTGTTTAAC+AGG | - | chr5.4:45848883-45848902 | None:intergenic | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr5.4:45851883-45851902 | None:intergenic | 40.0% |
| ! | TAGGAGTATGAAGACCTTGT+TGG | + | chr5.4:45851461-45851480 | MS.gene94069:intron | 40.0% |
| ! | TCTACAATGCCATGTCGTTT+AGG | + | chr5.4:45850027-45850046 | MS.gene94069:intron | 40.0% |
| ! | TTCTTGCTACTAGCTTCCAT+TGG | - | chr5.4:45848650-45848669 | None:intergenic | 40.0% |
| !! | AGGAAGGAGATGCTCTAAAA+TGG | - | chr5.4:45849837-45849856 | None:intergenic | 40.0% |
| !! | CCACCCTTAAGCTCATTTTT+AGG | - | chr5.4:45852103-45852122 | None:intergenic | 40.0% |
| !! | CTTCCTATGTTGACTTCTTG+AGG | - | chr5.4:45849428-45849447 | None:intergenic | 40.0% |
| !! | TTTACATATGATAGCGGACC+TGG | - | chr5.4:45848980-45848999 | None:intergenic | 40.0% |
| !! | TTTGTTTTTCAGCCGAGATC+CGG | + | chr5.4:45852472-45852491 | MS.gene94069:intron | 40.0% |
| !!! | ATTTTAGAGCATCTCCTTCC+TGG | + | chr5.4:45849836-45849855 | MS.gene94069:intron | 40.0% |
| !!! | GGTGGTTTGTTCTGTTTTTC+TGG | + | chr5.4:45850342-45850361 | MS.gene94069:intron | 40.0% |
| AAACAGCTTATGGGTCCGTT+TGG | + | chr5.4:45847998-45848017 | MS.gene94069:intron | 45.0% | |
| ACCAATGTGCTACAAGCGAA+AGG | - | chr5.4:45851302-45851321 | None:intergenic | 45.0% | |
| AGAACAACGAAAACGTCCAG+AGG | - | chr5.4:45849214-45849233 | None:intergenic | 45.0% | |
| AGTTTGTCTTCCCCTTCCAA+AGG | + | chr5.4:45850878-45850897 | MS.gene94069:intron | 45.0% | |
| ATGAAGGTGAGCTATCCTCT+AGG | + | chr5.4:45851442-45851461 | MS.gene94069:intron | 45.0% | |
| ATGAGCTTAAGGGTGGTTAC+AGG | + | chr5.4:45852107-45852126 | MS.gene94069:intron | 45.0% | |
| ATGATCGGTATGTTCACCTC+TGG | + | chr5.4:45849195-45849214 | MS.gene94069:intron | 45.0% | |
| CAAATTGCGGGATCATAGAG+AGG | + | chr5.4:45848889-45848908 | MS.gene94069:intron | 45.0% | |
| CAAGGTCTTCATACTCCTAG+AGG | - | chr5.4:45851460-45851479 | None:intergenic | 45.0% | |
| CAATGTGCTACAAGCGAAAG+GGG | - | chr5.4:45851300-45851319 | None:intergenic | 45.0% | |
| CAGTTTCATTCTCCTCGTAG+TGG | - | chr5.4:45847445-45847464 | None:intergenic | 45.0% | |
| CCAATGTGCTACAAGCGAAA+GGG | - | chr5.4:45851301-45851320 | None:intergenic | 45.0% | |
| CCACGATTTGAGTCTCTTTG+CGG | + | chr5.4:45849161-45849180 | MS.gene94069:CDS | 45.0% | |
| CTATTGCCAGGTTTCACTGT+AGG | - | chr5.4:45852032-45852051 | None:intergenic | 45.0% | |
| GAGGAAGAGAAATGCTGCAA+AGG | + | chr5.4:45852671-45852690 | MS.gene94069:CDS | 45.0% | |
| GCTAGCTGATGTAACATTCG+AGG | + | chr5.4:45847617-45847636 | MS.gene94069:CDS | 45.0% | |
| GCTTACATCTTCTGATGAGG+AGG | - | chr5.4:45847486-45847505 | None:intergenic | 45.0% | |
| GGGTTTCATCGGTGGAATTT+GGG | - | chr5.4:45847424-45847443 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr5.4:45851874-45851893 | None:intergenic | 45.0% | |
| TAATTTCCCCCATGTGCAAG+AGG | - | chr5.4:45852221-45852240 | None:intergenic | 45.0% | |
| TAGCAGGGAACTTATGAGCT+GGG | - | chr5.4:45850107-45850126 | None:intergenic | 45.0% | |
| TCGTAGATCTGGTGAAAACG+TGG | + | chr5.4:45852713-45852732 | MS.gene94069:CDS | 45.0% | |
| TGATCTTCCTGCTGAAAGAC+AGG | + | chr5.4:45850673-45850692 | MS.gene94069:CDS | 45.0% | |
| TGCAGAAAGCTCGATCGAAT+GGG | + | chr5.4:45847643-45847662 | MS.gene94069:CDS | 45.0% | |
| TGGGTTTCATCGGTGGAATT+TGG | - | chr5.4:45847425-45847444 | None:intergenic | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | + | chr5.4:45851693-45851712 | MS.gene94069:intron | 45.0% | |
| TTCATAGGGCCTCTTCTGAT+TGG | - | chr5.4:45848208-45848227 | None:intergenic | 45.0% | |
| TTGCACTTATCATGAGTGGG+AGG | + | chr5.4:45850131-45850150 | MS.gene94069:intron | 45.0% | |
| TTGCAGAAAGCTCGATCGAA+TGG | + | chr5.4:45847642-45847661 | MS.gene94069:CDS | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr5.4:45851872-45851891 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5.4:45851697-45851716 | MS.gene94069:intron | 45.0% | |
| ! | ACAATGCCATGTCGTTTAGG+TGG | + | chr5.4:45850030-45850049 | MS.gene94069:intron | 45.0% |
| ! | CTAAGGGTGTGTTTGGATTG+AGG | - | chr5.4:45851884-45851903 | None:intergenic | 45.0% |
| ! | CTCTTAAGGGTGTGTTTGGA+TGG | + | chr5.4:45851683-45851702 | MS.gene94069:intron | 45.0% |
| ! | GAAGAATGTGTCGAAGGTGT+GGG | + | chr5.4:45849444-45849463 | MS.gene94069:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | + | chr5.4:45851687-45851706 | MS.gene94069:intron | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | + | chr5.4:45851686-45851705 | MS.gene94069:intron | 45.0% |
| ! | TTCAATATGTGCGTTGGCCA+AGG | - | chr5.4:45849869-45849888 | None:intergenic | 45.0% |
| !! | AAATAATTATATATTACTAA+CGG | - | chr5.4:45848559-45848578 | None:intergenic | 5.0% |
| !!! | ATTTGAAATTTTAAATTTTA+TGG | + | chr5.4:45852133-45852152 | MS.gene94069:intron | 5.0% |
| AAAAAGAACAACCAGGGGGG+CGG | - | chr5.4:45850284-45850303 | None:intergenic | 50.0% | |
| AAGCCTTTGCTTCCGGATCT+CGG | - | chr5.4:45852487-45852506 | None:intergenic | 50.0% | |
| ACGGCATCTTCTGGCATAAC+AGG | + | chr5.4:45850763-45850782 | MS.gene94069:intron | 50.0% | |
| AGAGAGAGAAGCAGCAAAGC+AGG | + | chr5.4:45851015-45851034 | MS.gene94069:CDS | 50.0% | |
| AGCACCTGCTGAACCAGAAA+AGG | - | chr5.4:45850312-45850331 | None:intergenic | 50.0% | |
| ATCAGCAGGGCAGAGATCAT+TGG | - | chr5.4:45848752-45848771 | None:intergenic | 50.0% | |
| ATCCCCTTTCCTCTTGCACA+TGG | + | chr5.4:45852209-45852228 | MS.gene94069:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr5.4:45851868-45851887 | None:intergenic | 50.0% | |
| ATTGCGGGATCATAGAGAGG+AGG | + | chr5.4:45848892-45848911 | MS.gene94069:intron | 50.0% | |
| ATTGTGCGAGAATGGGGAGT+AGG | - | chr5.4:45851917-45851936 | None:intergenic | 50.0% | |
| CAACACCCTACAGTGAAACC+TGG | + | chr5.4:45852023-45852042 | MS.gene94069:intron | 50.0% | |
| CAGGTTTCACTGTAGGGTGT+TGG | - | chr5.4:45852025-45852044 | None:intergenic | 50.0% | |
| CCCTTTCGCTTGTAGCACAT+TGG | + | chr5.4:45851298-45851317 | MS.gene94069:intron | 50.0% | |
| CCGCAAAGAGACTCAAATCG+TGG | - | chr5.4:45849164-45849183 | None:intergenic | 50.0% | |
| CTACCTACCTGTCTTTCAGC+AGG | - | chr5.4:45850683-45850702 | None:intergenic | 50.0% | |
| CTAGCAGGGAACTTATGAGC+TGG | - | chr5.4:45850108-45850127 | None:intergenic | 50.0% | |
| CTGCAGCAATACCCAAACAG+AGG | - | chr5.4:45849984-45850003 | None:intergenic | 50.0% | |
| CTTCCTGCTGAAAGACAGGT+AGG | + | chr5.4:45850677-45850696 | MS.gene94069:intron | 50.0% | |
| GAGAGAGAAGCAGCAAAGCA+GGG | + | chr5.4:45851016-45851035 | MS.gene94069:CDS | 50.0% | |
| GCAGAAAGCTCGATCGAATG+GGG | + | chr5.4:45847644-45847663 | MS.gene94069:CDS | 50.0% | |
| GCATGTGCACGCATACACAA+TGG | - | chr5.4:45849933-45849952 | None:intergenic | 50.0% | |
| GGAAGAATGTGTCGAAGGTG+TGG | + | chr5.4:45849443-45849462 | MS.gene94069:intron | 50.0% | |
| GTGCTTTCCCTCTGTGTGTA+GGG | + | chr5.4:45850429-45850448 | MS.gene94069:intron | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5.4:45851696-45851715 | MS.gene94069:intron | 50.0% | |
| TCCCCTTTCCTCTTGCACAT+GGG | + | chr5.4:45852210-45852229 | MS.gene94069:intron | 50.0% | |
| TCTGTGTGGGGAGTTGTGTA+GGG | + | chr5.4:45850235-45850254 | MS.gene94069:intron | 50.0% | |
| TGCTTTCCCTCTGTGTGTAG+GGG | + | chr5.4:45850430-45850449 | MS.gene94069:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr5.4:45851867-45851886 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5.4:45851698-45851717 | MS.gene94069:intron | 50.0% | |
| TTGTGCGAGAATGGGGAGTA+GGG | - | chr5.4:45851916-45851935 | None:intergenic | 50.0% | |
| ! | TATGTGCGTTGGCCAAGGAA+AGG | - | chr5.4:45849864-45849883 | None:intergenic | 50.0% |
| !! | CTCCTCGTAGTGGGTTTCAT+CGG | - | chr5.4:45847435-45847454 | None:intergenic | 50.0% |
| !! | TTTCTGGTTCAGCAGGTGCT+TGG | + | chr5.4:45850312-45850331 | MS.gene94069:intron | 50.0% |
| !!! | CTCTCCTTTTCTGGTTCAGC+AGG | + | chr5.4:45850305-45850324 | MS.gene94069:intron | 50.0% |
| AACGACCCCCTACACACAGA+GGG | - | chr5.4:45850439-45850458 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | + | chr5.4:45851702-45851721 | MS.gene94069:intron | 55.0% | |
| CACCGATGAAACCCACTACG+AGG | + | chr5.4:45847430-45847449 | MS.gene94069:CDS | 55.0% | |
| CCAGAAGATGCCGTCATGAG+AGG | - | chr5.4:45850757-45850776 | None:intergenic | 55.0% | |
| CCCCATGTGCAAGAGGAAAG+GGG | - | chr5.4:45852214-45852233 | None:intergenic | 55.0% | |
| CCCCCATGTGCAAGAGGAAA+GGG | - | chr5.4:45852215-45852234 | None:intergenic | 55.0% | |
| CCCCTTTCCTCTTGCACATG+GGG | + | chr5.4:45852211-45852230 | MS.gene94069:intron | 55.0% | |
| CCCTTTCCTCTTGCACATGG+GGG | + | chr5.4:45852212-45852231 | MS.gene94069:intron | 55.0% | |
| CCTCTCATGACGGCATCTTC+TGG | + | chr5.4:45850754-45850773 | MS.gene94069:intron | 55.0% | |
| CGTGCTTTCCCTCTGTGTGT+AGG | + | chr5.4:45850428-45850447 | MS.gene94069:intron | 55.0% | |
| CTACCGCTGCCAACAAAGGA+CGG | - | chr5.4:45850163-45850182 | None:intergenic | 55.0% | |
| GCTTTCCCTCTGTGTGTAGG+GGG | + | chr5.4:45850431-45850450 | MS.gene94069:intron | 55.0% | |
| GGGGTTCTTTGGGTCTGTGT+GGG | + | chr5.4:45850222-45850241 | MS.gene94069:intron | 55.0% | |
| GGGTTCTTTGGGTCTGTGTG+GGG | + | chr5.4:45850223-45850242 | MS.gene94069:intron | 55.0% | |
| GTCCTTTGTTGGCAGCGGTA+GGG | + | chr5.4:45850162-45850181 | MS.gene94069:intron | 55.0% | |
| GTCTGTGTGGGGAGTTGTGT+AGG | + | chr5.4:45850234-45850253 | MS.gene94069:intron | 55.0% | |
| GTGTGTAGGGGGTCGTTCTT+GGG | + | chr5.4:45850442-45850461 | MS.gene94069:intron | 55.0% | |
| TACCGCTGCCAACAAAGGAC+GGG | - | chr5.4:45850162-45850181 | None:intergenic | 55.0% | |
| TCCCCCATGTGCAAGAGGAA+AGG | - | chr5.4:45852216-45852235 | None:intergenic | 55.0% | |
| TCCTTCCTGGTGCCTTTCCT+TGG | + | chr5.4:45849849-45849868 | MS.gene94069:intron | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | + | chr5.4:45851703-45851722 | MS.gene94069:intron | 55.0% | |
| TGGTTCAGCAGGTGCTTGGT+TGG | + | chr5.4:45850316-45850335 | MS.gene94069:intron | 55.0% | |
| TGTGTAGGGGGTCGTTCTTG+GGG | + | chr5.4:45850443-45850462 | MS.gene94069:intron | 55.0% | |
| TGTGTGTAGGGGGTCGTTCT+TGG | + | chr5.4:45850441-45850460 | MS.gene94069:intron | 55.0% | |
| TGTGTGTTTCGGCCTTCCCA+GGG | + | chr5.4:45850404-45850423 | MS.gene94069:intron | 55.0% | |
| TTGCTAGCGCCCATACTCCT+AGG | + | chr5.4:45852071-45852090 | MS.gene94069:intron | 55.0% | |
| TTTCTCTGCCTCCTCTCGTC+TGG | + | chr5.4:45850258-45850277 | MS.gene94069:intron | 55.0% | |
| ! | AGCGGTAGGGCATTCTTTGG+GGG | + | chr5.4:45850175-45850194 | MS.gene94069:intron | 55.0% |
| ! | CAGCAGGTGCTTGGTTGGTT+TGG | + | chr5.4:45850321-45850340 | MS.gene94069:intron | 55.0% |
| ! | CAGCGGTAGGGCATTCTTTG+GGG | + | chr5.4:45850174-45850193 | MS.gene94069:intron | 55.0% |
| ! | GCAGCGGTAGGGCATTCTTT+GGG | + | chr5.4:45850173-45850192 | MS.gene94069:intron | 55.0% |
| !! | CAGGTGCTTGGTTGGTTTGG+TGG | + | chr5.4:45850324-45850343 | MS.gene94069:intron | 55.0% |
| !! | CTCGTAGTGGGTTTCATCGG+TGG | - | chr5.4:45847432-45847451 | None:intergenic | 55.0% |
| AGCCCGTCCTTTGTTGGCAG+CGG | + | chr5.4:45850157-45850176 | MS.gene94069:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr5.4:45851706-45851725 | MS.gene94069:intron | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr5.4:45851725-45851706 | None:intergenic | 60.0% | |
| AGGTGCAGCCCGTCCTTTGT+TGG | + | chr5.4:45850151-45850170 | MS.gene94069:intron | 60.0% | |
| CAGCCGAGATCCGGAAGCAA+AGG | + | chr5.4:45852481-45852500 | MS.gene94069:intron | 60.0% | |
| CGTCCTTTGTTGGCAGCGGT+AGG | + | chr5.4:45850161-45850180 | MS.gene94069:intron | 60.0% | |
| GAACGACCCCCTACACACAG+AGG | - | chr5.4:45850440-45850459 | None:intergenic | 60.0% | |
| GGGGGTTCTTTGGGTCTGTG+TGG | + | chr5.4:45850221-45850240 | MS.gene94069:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr5.4:45851707-45851726 | MS.gene94069:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr5.4:45851726-45851707 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr5.4:45851708-45851727 | MS.gene94069:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr5.4:45851727-45851708 | None:intergenic | 60.0% | |
| GTGTAGGGGGTCGTTCTTGG+GGG | + | chr5.4:45850444-45850463 | MS.gene94069:intron | 60.0% | |
| GTGTGTGTTTCGGCCTTCCC+AGG | + | chr5.4:45850403-45850422 | MS.gene94069:intron | 60.0% | |
| GTGTGTTTCGGCCTTCCCAG+GGG | + | chr5.4:45850405-45850424 | MS.gene94069:intron | 60.0% | |
| TGCCCTACCGCTGCCAACAA+AGG | - | chr5.4:45850167-45850186 | None:intergenic | 60.0% | |
| ! | CGGTAGGGCATTCTTTGGGG+GGG | + | chr5.4:45850177-45850196 | MS.gene94069:intron | 60.0% |
| ! | GCGGTAGGGCATTCTTTGGG+GGG | + | chr5.4:45850176-45850195 | MS.gene94069:intron | 60.0% |
| ! | GGCAGCGGTAGGGCATTCTT+TGG | + | chr5.4:45850172-45850191 | MS.gene94069:intron | 60.0% |
| ! | GGTAGGGCATTCTTTGGGGG+GGG | + | chr5.4:45850178-45850197 | MS.gene94069:intron | 60.0% |
| ! | GTAGGGCATTCTTTGGGGGG+GGG | + | chr5.4:45850179-45850198 | MS.gene94069:intron | 60.0% |
| ! | TAGGGCATTCTTTGGGGGGG+GGG | + | chr5.4:45850180-45850199 | MS.gene94069:intron | 60.0% |
| !! | GCCAAGGAAAGGCACCAGGA+AGG | - | chr5.4:45849853-45849872 | None:intergenic | 60.0% |
| !! | GTTGGCCAAGGAAAGGCACC+AGG | - | chr5.4:45849857-45849876 | None:intergenic | 60.0% |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr5.4:45851712-45851731 | MS.gene94069:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr5.4:45851731-45851712 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr5.4:45851711-45851730 | MS.gene94069:intron | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr5.4:45851730-45851711 | None:intergenic | 65.0% | |
| ! | ACAGAGGGAAAGCACGCCCC+TGG | - | chr5.4:45850424-45850443 | None:intergenic | 65.0% |
| ! | AGGGCATTCTTTGGGGGGGG+GGG | + | chr5.4:45850181-45850200 | MS.gene94069:intron | 65.0% |
| ! | CAGAGGGAAAGCACGCCCCT+GGG | - | chr5.4:45850423-45850442 | None:intergenic | 65.0% |
| ! | ATTCTTTGGGGGGGGGGGGG+GGG | + | chr5.4:45850186-45850205 | MS.gene94069:intron | 70.0% |
| ! | CATTCTTTGGGGGGGGGGGG+GGG | + | chr5.4:45850185-45850204 | MS.gene94069:intron | 70.0% |
| ! | GCATTCTTTGGGGGGGGGGG+GGG | + | chr5.4:45850184-45850203 | MS.gene94069:intron | 70.0% |
| ! | GGCATTCTTTGGGGGGGGGG+GGG | + | chr5.4:45850183-45850202 | MS.gene94069:intron | 70.0% |
| ! | GGGAAAGCACGCCCCTGGGA+AGG | - | chr5.4:45850419-45850438 | None:intergenic | 70.0% |
| ! | GGGCATTCTTTGGGGGGGGG+GGG | + | chr5.4:45850182-45850201 | MS.gene94069:intron | 70.0% |
| GGGGGGGGGGGGGGTTCTTT+GGG | + | chr5.4:45850212-45850231 | MS.gene94069:intron | 75.0% | |
| ! | TTCTTTGGGGGGGGGGGGGG+GGG | + | chr5.4:45850187-45850206 | MS.gene94069:intron | 75.0% |
| ! | CAGGGGGGCGGCCAGACGAG+AGG | - | chr5.4:45850272-45850291 | None:intergenic | 80.0% |
| ! | CTCTCGTCTGGCCGCCCCCC+TGG | + | chr5.4:45850270-45850289 | MS.gene94069:intron | 80.0% |
| ! | GGGGGCGGCCAGACGAGAGG+AGG | - | chr5.4:45850269-45850288 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGGTTCTT+TGG | + | chr5.4:45850211-45850230 | MS.gene94069:intron | 80.0% |
| !! | TCTTTGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850188-45850207 | MS.gene94069:intron | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850190-45850209 | MS.gene94069:intron | 85.0% |
| !! | CTTTGGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850189-45850208 | MS.gene94069:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850191-45850210 | MS.gene94069:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr5.4:45850192-45850211 | MS.gene94069:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 45847398 | 45852740 | 45847398 | ID=MS.gene94069 |
| chr5.4 | mRNA | 45847398 | 45852740 | 45847398 | ID=MS.gene94069.t1;Parent=MS.gene94069 |
| chr5.4 | exon | 45847398 | 45847499 | 45847398 | ID=MS.gene94069.t1.exon1;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45847398 | 45847499 | 45847398 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45847591 | 45847727 | 45847591 | ID=MS.gene94069.t1.exon2;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45847591 | 45847727 | 45847591 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45848646 | 45848712 | 45848646 | ID=MS.gene94069.t1.exon3;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45848646 | 45848712 | 45848646 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45849149 | 45849201 | 45849149 | ID=MS.gene94069.t1.exon4;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45849149 | 45849201 | 45849149 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45850640 | 45850694 | 45850640 | ID=MS.gene94069.t1.exon5;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45850640 | 45850694 | 45850640 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45850785 | 45850859 | 45850785 | ID=MS.gene94069.t1.exon6;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45850785 | 45850859 | 45850785 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45850947 | 45851064 | 45850947 | ID=MS.gene94069.t1.exon7;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45850947 | 45851064 | 45850947 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45852484 | 45852530 | 45852484 | ID=MS.gene94069.t1.exon8;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45852484 | 45852530 | 45852484 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| chr5.4 | exon | 45852636 | 45852740 | 45852636 | ID=MS.gene94069.t1.exon9;Parent=MS.gene94069.t1 |
| chr5.4 | CDS | 45852636 | 45852740 | 45852636 | ID=cds.MS.gene94069.t1;Parent=MS.gene94069.t1 |
| Gene Sequence |
| Protein sequence |
