Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94104.t1 | XP_003614820.1 | 98.5 | 884 | 13 | 0 | 1 | 884 | 1 | 884 | 0.00E+00 | 1832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94104.t1 | P39869 | 81.9 | 900 | 147 | 3 | 1 | 884 | 1 | 900 | 0.0e+00 | 1582.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94104.t1 | E7ELN7 | 98.5 | 884 | 13 | 0 | 1 | 884 | 1 | 884 | 0.0e+00 | 1832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053740 | MS.gene94104 | 0.965154 | 3.08E-124 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94104.t1 | MTR_5g059820 | 98.529 | 884 | 13 | 0 | 1 | 884 | 1 | 884 | 0.0 | 1820 |
| MS.gene94104.t1 | MTR_3g073180 | 71.413 | 906 | 233 | 8 | 1 | 884 | 1 | 902 | 0.0 | 1357 |
| MS.gene94104.t1 | MTR_3g073150 | 67.865 | 890 | 266 | 10 | 1 | 884 | 1 | 876 | 0.0 | 1253 |
| MS.gene94104.t1 | MTR_7g033410 | 32.552 | 384 | 230 | 10 | 92 | 462 | 5 | 372 | 2.14e-60 | 210 |
| MS.gene94104.t1 | MTR_6g023975 | 33.077 | 390 | 223 | 12 | 90 | 462 | 20 | 388 | 5.98e-59 | 207 |
| MS.gene94104.t1 | MTR_7g087090 | 40.458 | 262 | 133 | 6 | 616 | 875 | 30 | 270 | 1.68e-53 | 187 |
| MS.gene94104.t1 | MTR_3g079510 | 38.603 | 272 | 144 | 6 | 606 | 875 | 20 | 270 | 3.61e-52 | 184 |
| MS.gene94104.t1 | MTR_3g479590 | 38.603 | 272 | 144 | 6 | 606 | 875 | 20 | 270 | 3.61e-52 | 184 |
| MS.gene94104.t1 | MTR_8g044160 | 39.526 | 253 | 132 | 5 | 624 | 875 | 55 | 287 | 2.46e-50 | 179 |
| MS.gene94104.t1 | MTR_6g023975 | 33.022 | 321 | 184 | 8 | 155 | 461 | 4 | 307 | 1.03e-47 | 172 |
| MS.gene94104.t1 | MTR_4g114030 | 35.628 | 247 | 132 | 6 | 623 | 863 | 68 | 293 | 1.98e-39 | 149 |
| MS.gene94104.t1 | MTR_5g045630 | 48.515 | 101 | 44 | 2 | 513 | 612 | 1 | 94 | 1.35e-21 | 91.7 |
| MS.gene94104.t1 | MTR_8g027080 | 43.902 | 82 | 45 | 1 | 513 | 593 | 1 | 82 | 6.01e-16 | 76.3 |
| MS.gene94104.t1 | MTR_8g027080 | 43.902 | 82 | 45 | 1 | 513 | 593 | 1 | 82 | 6.39e-16 | 75.9 |
| MS.gene94104.t1 | MTR_4g022350 | 32.479 | 117 | 77 | 2 | 513 | 627 | 1 | 117 | 6.40e-16 | 75.9 |
| MS.gene94104.t1 | MTR_8g027080 | 43.902 | 82 | 45 | 1 | 513 | 593 | 1 | 82 | 7.01e-16 | 75.9 |
| MS.gene94104.t1 | MTR_4g022350 | 32.479 | 117 | 77 | 2 | 513 | 627 | 14 | 130 | 1.04e-15 | 75.5 |
| MS.gene94104.t1 | MTR_8g027080 | 43.902 | 82 | 45 | 1 | 513 | 593 | 1 | 82 | 1.88e-15 | 75.9 |
| MS.gene94104.t1 | MTR_7g117990 | 40.506 | 79 | 46 | 1 | 514 | 591 | 3 | 81 | 5.11e-15 | 73.6 |
| MS.gene94104.t1 | MTR_3g092095 | 38.750 | 80 | 48 | 1 | 513 | 591 | 1 | 80 | 5.30e-15 | 73.2 |
| MS.gene94104.t1 | MTR_6g088690 | 40.230 | 87 | 50 | 2 | 506 | 591 | 32 | 117 | 1.28e-12 | 65.9 |
| MS.gene94104.t1 | MTR_5g045630 | 48.611 | 72 | 29 | 2 | 542 | 612 | 16 | 80 | 2.89e-12 | 64.7 |
| MS.gene94104.t1 | MTR_1g016070 | 33.333 | 123 | 69 | 2 | 499 | 621 | 4 | 113 | 4.68e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94104.t1 | AT1G37130 | 72.440 | 918 | 218 | 8 | 1 | 884 | 1 | 917 | 0.0 | 1370 |
| MS.gene94104.t1 | AT1G77760 | 69.598 | 921 | 239 | 8 | 1 | 884 | 1 | 917 | 0.0 | 1363 |
| MS.gene94104.t1 | AT3G01910 | 34.465 | 383 | 219 | 12 | 90 | 458 | 20 | 384 | 4.51e-65 | 224 |
| MS.gene94104.t1 | AT5G17770 | 39.535 | 258 | 133 | 6 | 620 | 875 | 37 | 273 | 2.65e-51 | 182 |
| MS.gene94104.t1 | AT3G01910 | 34.426 | 305 | 171 | 9 | 167 | 458 | 1 | 289 | 5.95e-48 | 173 |
| MS.gene94104.t1 | AT5G20080 | 37.652 | 247 | 125 | 8 | 624 | 863 | 72 | 296 | 1.15e-39 | 150 |
| MS.gene94104.t1 | AT3G01910 | 34.286 | 245 | 134 | 9 | 223 | 458 | 6 | 232 | 5.17e-36 | 137 |
| MS.gene94104.t1 | AT5G48810 | 45.000 | 80 | 43 | 1 | 513 | 591 | 1 | 80 | 1.94e-19 | 85.9 |
| MS.gene94104.t1 | AT2G32720 | 37.607 | 117 | 71 | 2 | 513 | 627 | 1 | 117 | 4.10e-19 | 84.7 |
| MS.gene94104.t1 | AT1G26340 | 46.250 | 80 | 42 | 1 | 513 | 591 | 1 | 80 | 8.74e-18 | 81.3 |
| MS.gene94104.t1 | AT5G53560 | 42.500 | 80 | 45 | 1 | 513 | 591 | 1 | 80 | 3.38e-16 | 76.6 |
| MS.gene94104.t1 | AT1G60660 | 40.000 | 105 | 56 | 4 | 489 | 591 | 21 | 120 | 7.94e-13 | 66.6 |
| MS.gene94104.t1 | AT2G46650 | 41.667 | 72 | 41 | 1 | 521 | 591 | 6 | 77 | 9.10e-13 | 66.6 |
| MS.gene94104.t1 | AT2G32720 | 35.043 | 117 | 74 | 2 | 513 | 627 | 1 | 117 | 4.28e-11 | 62.0 |
Find 267 sgRNAs with CRISPR-Local
Find 535 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGCTGTGCAACCTAATT+TGG | 0.114087 | 5.4:-46775232 | MS.gene94104:CDS |
| CCCAACCTGAAAATCTTATT+TGG | 0.157360 | 5.4:-46777518 | MS.gene94104:CDS |
| ATTACCATTATAAGGATAAT+AGG | 0.194906 | 5.4:-46780576 | MS.gene94104:CDS |
| GAAGGATTTGCTTGTGTTCT+AGG | 0.205216 | 5.4:-46775187 | None:intergenic |
| GGCTCCAGATCATGGGTTTC+CGG | 0.219536 | 5.4:-46780686 | MS.gene94104:CDS |
| GAGCCATGATTTCTTTAATA+GGG | 0.224928 | 5.4:+46775970 | None:intergenic |
| TTTCCATGCATGGAGTTATT+TGG | 0.238570 | 5.4:+46776014 | None:intergenic |
| CTGAAAGGTTATTCATATTC+AGG | 0.243055 | 5.4:-46779983 | MS.gene94104:intron |
| AGCCACCGGGATGGTCTTTA+AGG | 0.245244 | 5.4:+46776177 | None:intergenic |
| CAATCCTCCCAACGAGCTTT+TGG | 0.246878 | 5.4:+46781099 | None:intergenic |
| ACCCTCTGAAGACCAATTAT+TGG | 0.249248 | 5.4:-46775865 | MS.gene94104:CDS |
| TGGGATTCAAACACGTTCTA+AGG | 0.251322 | 5.4:-46780851 | MS.gene94104:CDS |
| AATATTGGTGTTGGTGCTTT+TGG | 0.255382 | 5.4:-46777617 | MS.gene94104:CDS |
| ACAAGTAGCGTCGATGAAAT+TGG | 0.269252 | 5.4:-46775768 | MS.gene94104:CDS |
| TTACCGGGAAACCCGGTTTC+AGG | 0.284009 | 5.4:+46781394 | None:intergenic |
| AGAGCCATGATTTCTTTAAT+AGG | 0.296400 | 5.4:+46775969 | None:intergenic |
| AAATCTTATTTGGAATGTTA+TGG | 0.312010 | 5.4:-46777508 | MS.gene94104:intron |
| AGGTGTGAACGACGCCGTTT+AGG | 0.316093 | 5.4:+46781445 | None:intergenic |
| GCTGGTGGTGGGTCGAAATA+TGG | 0.318213 | 5.4:-46780787 | MS.gene94104:CDS |
| TGATGGTCATTACCATTATA+AGG | 0.322443 | 5.4:-46780584 | MS.gene94104:CDS |
| CGAAATATGGAACTAGTATT+AGG | 0.323529 | 5.4:-46780774 | MS.gene94104:CDS |
| GTTGAGGTGTTAGACCTTCT+TGG | 0.325611 | 5.4:-46777585 | MS.gene94104:CDS |
| CGCTGCACCACGTGCTTAAA+CGG | 0.344799 | 5.4:-46780876 | MS.gene94104:CDS |
| GAGGCTTTGGCTCCAGATCA+TGG | 0.351795 | 5.4:-46780694 | MS.gene94104:CDS |
| CCCTCTGAAGACCAATTATT+GGG | 0.352866 | 5.4:-46775864 | MS.gene94104:CDS |
| CAACAAAATATGGAAAATAT+TGG | 0.352911 | 5.4:-46777632 | MS.gene94104:CDS |
| TATTTAGACTCCCTCACTAT+TGG | 0.354916 | 5.4:-46775669 | MS.gene94104:CDS |
| CTGAAGGGATCTATGTTTAC+CGG | 0.358836 | 5.4:+46781378 | None:intergenic |
| TATGCCAATTTCTCCTTTGT+GGG | 0.358843 | 5.4:+46776427 | None:intergenic |
| GATAAATCTACCTTCTTCAT+TGG | 0.359590 | 5.4:+46780522 | None:intergenic |
| ATAGTGATAGGTTCAAGATT+TGG | 0.366836 | 5.4:-46775389 | MS.gene94104:CDS |
| GGCTCGACATTGGAAGTAAA+AGG | 0.368116 | 5.4:-46775648 | MS.gene94104:CDS |
| GAACCCTATTATCCTTATAA+TGG | 0.369046 | 5.4:+46780572 | None:intergenic |
| AGCTCATTGATTATATATTC+TGG | 0.369828 | 5.4:+46780088 | None:intergenic |
| CGACGGGTAGTCCCAATAAT+TGG | 0.370066 | 5.4:+46775853 | None:intergenic |
| TGCTGTCCCAAAAGCTCGTT+GGG | 0.370244 | 5.4:-46781106 | MS.gene94104:CDS |
| TGACCTGAAACCGGGTTTCC+CGG | 0.372660 | 5.4:-46781397 | MS.gene94104:CDS |
| ATCTTCGTCGTCGCTGCTGA+AGG | 0.380395 | 5.4:+46781362 | None:intergenic |
| TCCGGTGAGGGTTATTATAC+CGG | 0.384041 | 5.4:-46780668 | MS.gene94104:CDS |
| GCTTCCATGGTCCGTCTCAC+AGG | 0.384505 | 5.4:-46781222 | MS.gene94104:CDS |
| TGTTACCGTCGATGGAAAAT+TGG | 0.384736 | 5.4:-46775811 | MS.gene94104:CDS |
| AGGCCCCACAAAGGAGAAAT+TGG | 0.387604 | 5.4:-46776431 | MS.gene94104:CDS |
| GAGCAATTTCTTCGCTTTGT+CGG | 0.388009 | 5.4:+46776094 | None:intergenic |
| ATTTCATCGACGCTACTTGT+TGG | 0.388753 | 5.4:+46775771 | None:intergenic |
| CATGCAGAATGGTGAGGCTT+TGG | 0.390036 | 5.4:-46780707 | MS.gene94104:CDS |
| TGCTCGTACAGCAATCTCTT+TGG | 0.397955 | 5.4:+46777560 | None:intergenic |
| ATGAAGGAACGTTAGACAAC+TGG | 0.398186 | 5.4:-46781257 | MS.gene94104:CDS |
| GGTCCATGGTGAACCGGGTT+GGG | 0.398235 | 5.4:+46781046 | None:intergenic |
| CGAGCCGGTCCATGGTGAAC+CGG | 0.399215 | 5.4:+46781040 | None:intergenic |
| TGCGTAGTCCATGAGTTTAT+AGG | 0.403402 | 5.4:+46780019 | None:intergenic |
| CTATGCCAATTTCTCCTTTG+TGG | 0.404202 | 5.4:+46776426 | None:intergenic |
| TGATGAACAACTGTTGGTTC+AGG | 0.404730 | 5.4:-46776472 | MS.gene94104:CDS |
| CAACCACCTGATTGGTTACC+TGG | 0.409897 | 5.4:+46776383 | None:intergenic |
| ATACATTTCAGTTTGATCAT+TGG | 0.411130 | 5.4:+46775482 | None:intergenic |
| TTTCATCCATGACCTGAAAC+CGG | 0.413074 | 5.4:-46781406 | MS.gene94104:CDS |
| CGTCAATTCCGTAACCTAAA+CGG | 0.414260 | 5.4:-46781459 | MS.gene94104:CDS |
| CAAGTGTAACGGGTAATTCC+CGG | 0.416021 | 5.4:+46781001 | None:intergenic |
| CAAAAGCTCGTTGGGAGGAT+TGG | 0.416617 | 5.4:-46781098 | MS.gene94104:CDS |
| GCAACCTAATTTGGAAAAGA+TGG | 0.420735 | 5.4:-46775223 | MS.gene94104:CDS |
| TTGCCATCCAACCACCTGAT+TGG | 0.423313 | 5.4:+46776375 | None:intergenic |
| TTGGGACAGCACCGTGGTTA+CGG | 0.432080 | 5.4:+46781118 | None:intergenic |
| CCCGTTACACTTGTTTGTGC+TGG | 0.432618 | 5.4:-46780991 | MS.gene94104:CDS |
| GGATGGTGAAATGGCTTAAG+AGG | 0.432668 | 5.4:-46780630 | MS.gene94104:CDS |
| TGAGACATGATTCCACCATT+AGG | 0.433961 | 5.4:+46775693 | None:intergenic |
| TTACCATTATAAGGATAATA+GGG | 0.435303 | 5.4:-46780575 | MS.gene94104:CDS |
| GGGCAAAGATTTATAGTGAT+AGG | 0.439721 | 5.4:-46775401 | MS.gene94104:CDS |
| TTTGAAGATGTGTTCATGAA+TGG | 0.441590 | 5.4:+46776290 | None:intergenic |
| ATTGGTTACCTGGTTGTGTT+GGG | 0.444285 | 5.4:+46776393 | None:intergenic |
| ATTGGCTGGTGAGGATACTT+TGG | 0.450569 | 5.4:-46775286 | MS.gene94104:CDS |
| GAGGATTTACCTGCTGGTGG+TGG | 0.451774 | 5.4:-46780799 | MS.gene94104:CDS |
| CAAGTAGCGTCGATGAAATT+GGG | 0.454166 | 5.4:-46775767 | MS.gene94104:CDS |
| GATTGGTTACCTGGTTGTGT+TGG | 0.458076 | 5.4:+46776392 | None:intergenic |
| TCTTACATCATGTGAAATTG+AGG | 0.459529 | 5.4:+46775905 | None:intergenic |
| AGTGGTGGTTCTGAATTGAA+TGG | 0.460068 | 5.4:+46781192 | None:intergenic |
| TGTATGTTGTTTATGCAAAC+CGG | 0.462216 | 5.4:-46775464 | MS.gene94104:CDS |
| TTCATCCATGACCTGAAACC+GGG | 0.464711 | 5.4:-46781405 | MS.gene94104:CDS |
| CGGACGTAGTGGATTGGAAC+TGG | 0.465593 | 5.4:+46781138 | None:intergenic |
| CAAGATACTGTCTGAGCCAC+CGG | 0.466096 | 5.4:+46776163 | None:intergenic |
| GTTCAAGATTTGGTATGTTG+TGG | 0.467229 | 5.4:-46775379 | MS.gene94104:CDS |
| AAGGATTTGCTTGTGTTCTA+GGG | 0.467291 | 5.4:-46775186 | None:intergenic |
| AGGCTTTGGCTCCAGATCAT+GGG | 0.467396 | 5.4:-46780693 | MS.gene94104:CDS |
| ACAAAACCCTTGATTCTGCT+TGG | 0.467688 | 5.4:-46776238 | MS.gene94104:CDS |
| AACTAAACCGGTTACTTCAA+CGG | 0.471248 | 5.4:+46781074 | None:intergenic |
| GATTGGACCGTTGAAGTAAC+CGG | 0.472200 | 5.4:-46781081 | MS.gene94104:CDS |
| CGATGATCCAAGCAGAATCA+AGG | 0.472518 | 5.4:+46776231 | None:intergenic |
| TGCACAGCAAATTGAATCAT+AGG | 0.474304 | 5.4:+46775243 | None:intergenic |
| CAACCTAATTTGGAAAAGAT+GGG | 0.478169 | 5.4:-46775222 | MS.gene94104:CDS |
| TGGTGAGGATACTTTGGCAT+TGG | 0.478642 | 5.4:-46775280 | MS.gene94104:CDS |
| TCGGTGGAAGGATGGTGAAA+TGG | 0.479289 | 5.4:-46780639 | MS.gene94104:CDS |
| TGCCCCTATTAAAGAAATCA+TGG | 0.479375 | 5.4:-46775973 | MS.gene94104:CDS |
| GTCATGGATGAAATTGTTGC+TGG | 0.479408 | 5.4:+46781416 | None:intergenic |
| GAACGACGCCGTTTAGGTTA+CGG | 0.479612 | 5.4:+46781451 | None:intergenic |
| TTCCTATGTGTTACCGTCGA+TGG | 0.479701 | 5.4:-46775819 | MS.gene94104:CDS |
| CCAGCACAAACAAGTGTAAC+GGG | 0.480410 | 5.4:+46780991 | None:intergenic |
| GTGGTGGTTCTGAATTGAAT+GGG | 0.480933 | 5.4:+46781193 | None:intergenic |
| GAGTTCGCCACTTGATAAAC+CGG | 0.483104 | 5.4:+46775519 | None:intergenic |
| GAAATTGTTGCTGGGATTGA+AGG | 0.485457 | 5.4:+46781425 | None:intergenic |
| CGGTCCATGGTGAACCGGGT+TGG | 0.492398 | 5.4:+46781045 | None:intergenic |
| AGATCATGGGTTTCCGGTGA+GGG | 0.493171 | 5.4:-46780680 | MS.gene94104:CDS |
| GGAAACCCGGTTTCAGGTCA+TGG | 0.493206 | 5.4:+46781400 | None:intergenic |
| GATACTTTGGCATTGGCTTG+TGG | 0.493728 | 5.4:-46775273 | MS.gene94104:CDS |
| CCGGTGAGGGTTATTATACC+GGG | 0.496614 | 5.4:-46780667 | MS.gene94104:CDS |
| CTCACCGGAAACCCATGATC+TGG | 0.497224 | 5.4:+46780682 | None:intergenic |
| ACACAACCAGGTAACCAATC+AGG | 0.502603 | 5.4:-46776389 | MS.gene94104:CDS |
| TGAGGGAAGAGTTGGATGAA+TGG | 0.503202 | 5.4:-46775422 | MS.gene94104:CDS |
| TTGCTCGAAGATTATAGAAT+CGG | 0.504204 | 5.4:-46776077 | MS.gene94104:CDS |
| AGGAAAATGTGTTTCCCGAC+GGG | 0.508028 | 5.4:+46775837 | None:intergenic |
| GGAGGATGATATATTGTTGA+GGG | 0.508311 | 5.4:-46775439 | MS.gene94104:CDS |
| CGACGGTTCAACTTCCAAGT+TGG | 0.511207 | 5.4:+46781296 | None:intergenic |
| AATTATTGGGACTACCCGTC+GGG | 0.511214 | 5.4:-46775851 | MS.gene94104:CDS |
| TCTTCGTCGTCGCTGCTGAA+GGG | 0.514170 | 5.4:+46781363 | None:intergenic |
| GACAGTATCTTGATCAATGC+CGG | 0.515774 | 5.4:-46776152 | MS.gene94104:CDS |
| GAGGGAAGAGTTGGATGAAT+GGG | 0.516001 | 5.4:-46775421 | MS.gene94104:CDS |
| CGTTCGTGAGTTTCCAAGCC+GGG | 0.516225 | 5.4:-46781019 | MS.gene94104:CDS |
| GTGGGACACATTGAGTATCT+TGG | 0.519227 | 5.4:-46775621 | MS.gene94104:CDS |
| GGTGCTGAGGATTTACCTGC+TGG | 0.520183 | 5.4:-46780805 | MS.gene94104:CDS |
| CGTTTAGGTTACGGAATTGA+CGG | 0.520579 | 5.4:+46781460 | None:intergenic |
| GTAACGGGTAATTCCCGGCT+TGG | 0.520644 | 5.4:+46781006 | None:intergenic |
| TGAAGGGTGGGAATATAGTG+TGG | 0.521449 | 5.4:-46775346 | MS.gene94104:CDS |
| AGGATTTACCTGCTGGTGGT+GGG | 0.523111 | 5.4:-46780798 | MS.gene94104:CDS |
| ACAATATATCATCCTCCGTC+CGG | 0.525027 | 5.4:+46775445 | None:intergenic |
| CAGCGAAACGCCGCGCCACA+CGG | 0.525507 | 5.4:+46780894 | None:intergenic |
| AAGAGATTGCTGTACGAGCA+TGG | 0.526881 | 5.4:-46777557 | MS.gene94104:CDS |
| CCTCACTATTGGCTCGACAT+TGG | 0.531693 | 5.4:-46775658 | MS.gene94104:CDS |
| GAGCCGGTCCATGGTGAACC+GGG | 0.533325 | 5.4:+46781041 | None:intergenic |
| GTGCACCCCAGGTTTCCTAA+TGG | 0.534307 | 5.4:-46775708 | MS.gene94104:CDS |
| GATTCCACCATTAGGAAACC+TGG | 0.535128 | 5.4:+46775701 | None:intergenic |
| AGATCTTGCCTATAAACTCA+TGG | 0.535155 | 5.4:-46780027 | MS.gene94104:CDS |
| CACATTGAGTATCTTGGTAG+AGG | 0.535337 | 5.4:-46775615 | MS.gene94104:CDS |
| CATGAGGGAGCATGTTCCAT+TGG | 0.536462 | 5.4:-46775304 | MS.gene94104:CDS |
| AGGGAGCATGTTCCATTGGC+TGG | 0.536717 | 5.4:-46775300 | MS.gene94104:CDS |
| TATATTGTTGAGGGAAGAGT+TGG | 0.536719 | 5.4:-46775430 | MS.gene94104:CDS |
| TCTATGTTTACCGGGAAACC+CGG | 0.536984 | 5.4:+46781387 | None:intergenic |
| GTGACATGGCGTCGTAATCA+CGG | 0.538493 | 5.4:+46780054 | None:intergenic |
| CCCAATAATTGGTCTTCAGA+GGG | 0.540053 | 5.4:+46775864 | None:intergenic |
| CAGGTAACCAATCAGGTGGT+TGG | 0.540183 | 5.4:-46776382 | MS.gene94104:CDS |
| AGCCATGATTTCTTTAATAG+GGG | 0.540904 | 5.4:+46775971 | None:intergenic |
| AATATGGAACTAGTATTAGG+AGG | 0.541960 | 5.4:-46780771 | MS.gene94104:CDS |
| CTTCAGAGGGTAATGCAAAA+CGG | 0.542586 | 5.4:+46775877 | None:intergenic |
| TCTAACGTTCCTTCATCGCG+TGG | 0.543748 | 5.4:+46781264 | None:intergenic |
| AGAGATTGCTGTACGAGCAT+GGG | 0.546335 | 5.4:-46777556 | MS.gene94104:CDS |
| GTTGTGGAAAATGCAAATGA+AGG | 0.547180 | 5.4:-46775363 | MS.gene94104:CDS |
| ATCGGTGAACTTGTTGCCAC+GGG | 0.548351 | 5.4:-46776059 | MS.gene94104:CDS |
| ATTCTCGACCCACGCGATGA+AGG | 0.548361 | 5.4:-46781273 | MS.gene94104:CDS |
| ATGCCAATTTCTCCTTTGTG+GGG | 0.549386 | 5.4:+46776428 | None:intergenic |
| CGGGATGGTCTTTAAGGAAG+CGG | 0.550156 | 5.4:+46776183 | None:intergenic |
| GATGGGGTATGATATTAAGA+AGG | 0.550460 | 5.4:-46775205 | MS.gene94104:CDS |
| GCTGAACAAGCCAATGAAGA+AGG | 0.552383 | 5.4:-46780532 | MS.gene94104:intron |
| AAACTCAGAATTTCCATGCA+TGG | 0.555075 | 5.4:+46776004 | None:intergenic |
| TGGTTACGGACGTAGTGGAT+TGG | 0.556054 | 5.4:+46781132 | None:intergenic |
| TCAAACACGTTCTAAGGGTG+CGG | 0.556822 | 5.4:-46780845 | MS.gene94104:CDS |
| GGGATGGTCTTTAAGGAAGC+GGG | 0.557622 | 5.4:+46776184 | None:intergenic |
| TTCCATCGACGGTAACACAT+AGG | 0.557938 | 5.4:+46775817 | None:intergenic |
| AGGGCATGATGAACAACTGT+TGG | 0.559624 | 5.4:-46776478 | MS.gene94104:CDS |
| TGCTGTACGAGCATGGGATG+AGG | 0.559709 | 5.4:-46777550 | MS.gene94104:CDS |
| CAGAGGGCGTATACGCTGAA+AGG | 0.559797 | 5.4:-46779998 | MS.gene94104:CDS |
| CTCACGAACGAGCCGGTCCA+TGG | 0.559972 | 5.4:+46781032 | None:intergenic |
| ATTTCTTCGCTTTGTCGGAG+TGG | 0.561134 | 5.4:+46776099 | None:intergenic |
| AGATACTCAATGTGTCCCAC+GGG | 0.561482 | 5.4:+46775624 | None:intergenic |
| TCACCAAATAACTCCATGCA+TGG | 0.562432 | 5.4:-46776017 | MS.gene94104:CDS |
| GATGAACAACTGTTGGTTCA+GGG | 0.562468 | 5.4:-46776471 | MS.gene94104:CDS |
| CAGATCATGGGTTTCCGGTG+AGG | 0.565204 | 5.4:-46780681 | MS.gene94104:CDS |
| TAACCAATCAGGTGGTTGGA+TGG | 0.566160 | 5.4:-46776378 | MS.gene94104:CDS |
| TGCTTACATGCAGAATGGTG+AGG | 0.567286 | 5.4:-46780713 | MS.gene94104:CDS |
| GTGCTGTCCCAAAAGCTCGT+TGG | 0.567454 | 5.4:-46781107 | MS.gene94104:CDS |
| CCCGGTATAATAACCCTCAC+CGG | 0.568025 | 5.4:+46780667 | None:intergenic |
| GGTCACACGAAACGCTTCCA+TGG | 0.570201 | 5.4:-46781235 | MS.gene94104:CDS |
| CACCCCAGGTTTCCTAATGG+TGG | 0.570682 | 5.4:-46775705 | MS.gene94104:CDS |
| CGGTGTGATTCCAGTCCCAC+CGG | 0.571184 | 5.4:+46775539 | None:intergenic |
| AATCGGTGAACTTGTTGCCA+CGG | 0.573584 | 5.4:-46776060 | MS.gene94104:CDS |
| CTAACGTTCCTTCATCGCGT+GGG | 0.575367 | 5.4:+46781265 | None:intergenic |
| GCATGTTCCATTGGCTGGTG+AGG | 0.575892 | 5.4:-46775295 | MS.gene94104:CDS |
| CACCACGTGCTTAAACGGTG+TGG | 0.580269 | 5.4:-46780871 | MS.gene94104:CDS |
| CACCGTGGTTACGGACGTAG+TGG | 0.582001 | 5.4:+46781127 | None:intergenic |
| TGGTGCATGAGACGTGGGAG+TGG | 0.582406 | 5.4:+46781174 | None:intergenic |
| TCCCAATAATTGGTCTTCAG+AGG | 0.582671 | 5.4:+46775863 | None:intergenic |
| CAATGGACGGTGGAGAAACA+TGG | 0.583710 | 5.4:-46777686 | MS.gene94104:CDS |
| ACCAGCACAAACAAGTGTAA+CGG | 0.584993 | 5.4:+46780990 | None:intergenic |
| GAAGGGTGGGAATATAGTGT+GGG | 0.585437 | 5.4:-46775345 | MS.gene94104:CDS |
| TTCATCGGTACAATCAGTGC+CGG | 0.586097 | 5.4:+46776133 | None:intergenic |
| ATATGGAACTAGTATTAGGA+GGG | 0.588083 | 5.4:-46780770 | MS.gene94104:CDS |
| GCAAATTGAATCATAGGTGG+TGG | 0.588176 | 5.4:+46775249 | None:intergenic |
| TGAAGGGATCTATGTTTACC+GGG | 0.588783 | 5.4:+46781379 | None:intergenic |
| AAAGTATCCTCACCAGCCAA+TGG | 0.589581 | 5.4:+46775288 | None:intergenic |
| CTTCCATGGTCCGTCTCACA+GGG | 0.590477 | 5.4:-46781221 | MS.gene94104:CDS |
| CAATTATTGGGACTACCCGT+CGG | 0.590810 | 5.4:-46775852 | MS.gene94104:CDS |
| CGGAGGATGATATATTGTTG+AGG | 0.590840 | 5.4:-46775440 | MS.gene94104:CDS |
| TTTGTGGGTGAACAGGTTGG+TGG | 0.593074 | 5.4:-46780117 | MS.gene94104:intron |
| GGGTGAAAACAAACGTGTGT+AGG | 0.593200 | 5.4:-46776451 | MS.gene94104:CDS |
| TTGGAAACTCACGAACGAGC+CGG | 0.593252 | 5.4:+46781025 | None:intergenic |
| TGGAAAATGCAAATGAAGGG+TGG | 0.596804 | 5.4:-46775359 | MS.gene94104:CDS |
| TGAAGGAACGTTAGACAACT+GGG | 0.596994 | 5.4:-46781256 | MS.gene94104:CDS |
| CAACCCGGTTCACCATGGAC+CGG | 0.597430 | 5.4:-46781044 | MS.gene94104:CDS |
| TGTTCAGCATCAACATGAGA+AGG | 0.597645 | 5.4:+46780547 | None:intergenic |
| TATTAGGAGGGAAATTGCGA+TGG | 0.597837 | 5.4:-46780758 | MS.gene94104:CDS |
| CTGCTGTTTCGAACTCCGTG+TGG | 0.598004 | 5.4:-46780909 | MS.gene94104:CDS |
| CAATCTCTTTGGTACCAAGA+AGG | 0.598226 | 5.4:+46777571 | None:intergenic |
| TCGTTCGTGAGTTTCCAAGC+CGG | 0.600291 | 5.4:-46781020 | MS.gene94104:CDS |
| TTTCCCTGTGAGACGGACCA+TGG | 0.600709 | 5.4:+46781218 | None:intergenic |
| TACTGTCTGAGCCACCGGGA+TGG | 0.601103 | 5.4:+46776168 | None:intergenic |
| AAGATACTGTCTGAGCCACC+GGG | 0.601621 | 5.4:+46776164 | None:intergenic |
| GTGGATAGCTTCGAATTCAT+CGG | 0.602979 | 5.4:+46776118 | None:intergenic |
| ATTCCACCATTAGGAAACCT+GGG | 0.603118 | 5.4:+46775702 | None:intergenic |
| TATTTCGACCCACCACCAGC+AGG | 0.603799 | 5.4:+46780790 | None:intergenic |
| TTTGAACACCCAACACAACC+AGG | 0.604927 | 5.4:-46776401 | MS.gene94104:CDS |
| AACATGGCACGTGTGCACAT+TGG | 0.605465 | 5.4:-46777670 | MS.gene94104:CDS |
| TGCATGAGACGTGGGAGTGG+TGG | 0.607073 | 5.4:+46781177 | None:intergenic |
| CGCTTCCTTAAAGACCATCC+CGG | 0.607488 | 5.4:-46776182 | MS.gene94104:CDS |
| GGGATTCAAACACGTTCTAA+GGG | 0.607655 | 5.4:-46780850 | MS.gene94104:CDS |
| AAGATACTCAATGTGTCCCA+CGG | 0.608335 | 5.4:+46775623 | None:intergenic |
| GGCAAGATCTCATCGTGACA+TGG | 0.608438 | 5.4:+46780040 | None:intergenic |
| GTTTCGAACTCCGTGTGGCG+CGG | 0.609328 | 5.4:-46780904 | MS.gene94104:CDS |
| AACATGGTGAAACAAAGCGT+TGG | 0.609781 | 5.4:-46780949 | MS.gene94104:CDS |
| AATATGGAAAATATTGGTGT+TGG | 0.612385 | 5.4:-46777626 | MS.gene94104:CDS |
| TCGCGTGGGTCGAGAATCGA+CGG | 0.612932 | 5.4:+46781279 | None:intergenic |
| TGTTGCCACGGGCTACACCT+CGG | 0.618003 | 5.4:-46776048 | MS.gene94104:CDS |
| ACCACGTGCTTAAACGGTGT+GGG | 0.618578 | 5.4:-46780870 | MS.gene94104:CDS |
| GCAAGAATCACATCACGAGA+AGG | 0.619291 | 5.4:+46780733 | None:intergenic |
| ATCCACTACGTCCGTAACCA+CGG | 0.620214 | 5.4:-46781129 | MS.gene94104:CDS |
| TCATGGATGAAATTGTTGCT+GGG | 0.621760 | 5.4:+46781417 | None:intergenic |
| CGAGTTGAGGTAACAATGGA+CGG | 0.622477 | 5.4:-46777699 | MS.gene94104:CDS |
| TAGGAAAATGTGTTTCCCGA+CGG | 0.623184 | 5.4:+46775836 | None:intergenic |
| ATTCTTGCTTACATGCAGAA+TGG | 0.624278 | 5.4:-46780718 | MS.gene94104:CDS |
| AAACTCATGGACTACGCAGA+GGG | 0.625076 | 5.4:-46780014 | MS.gene94104:CDS |
| CAATGTCGAGCCAATAGTGA+GGG | 0.626618 | 5.4:+46775659 | None:intergenic |
| AAACCGTGGTGCATGAGACG+TGG | 0.629848 | 5.4:+46781168 | None:intergenic |
| AAACCCAACCCGGTTCACCA+TGG | 0.631239 | 5.4:-46781049 | MS.gene94104:CDS |
| ATGGGTGTTTCCCTGTGAGA+CGG | 0.635095 | 5.4:+46781211 | None:intergenic |
| ATTCTTGGAGATTCGATGCG+TGG | 0.635216 | 5.4:+46781331 | None:intergenic |
| ATCCTTCCACCGATAAAACC+CGG | 0.635715 | 5.4:+46780649 | None:intergenic |
| GACACGAGTTGAGGTAACAA+TGG | 0.638170 | 5.4:-46777703 | MS.gene94104:CDS |
| CAGACGTAAAGAACAAAACA+TGG | 0.641171 | 5.4:-46780965 | MS.gene94104:CDS |
| GATGATCCAAGCAGAATCAA+GGG | 0.641609 | 5.4:+46776232 | None:intergenic |
| AACCTAATTTGGAAAAGATG+GGG | 0.642783 | 5.4:-46775221 | MS.gene94104:CDS |
| TAGAAAAGTGACACGAGTTG+AGG | 0.647638 | 5.4:-46777712 | MS.gene94104:CDS |
| CCAATGTCGAGCCAATAGTG+AGG | 0.648223 | 5.4:+46775658 | None:intergenic |
| GGAAAATGCAAATGAAGGGT+GGG | 0.649053 | 5.4:-46775358 | MS.gene94104:CDS |
| TTGTGGAAAATGCAAATGAA+GGG | 0.650089 | 5.4:-46775362 | MS.gene94104:CDS |
| CACGGAGTTCGAAACAGCAG+CGG | 0.650620 | 5.4:+46780912 | None:intergenic |
| TCTGCTTGGATCATCGTCCA+CGG | 0.654052 | 5.4:-46776224 | MS.gene94104:CDS |
| GCTGAGGATTTACCTGCTGG+TGG | 0.655306 | 5.4:-46780802 | MS.gene94104:CDS |
| TCCCACACCGTTTAAGCACG+TGG | 0.655389 | 5.4:+46780869 | None:intergenic |
| AATCACACCGGTTTATCAAG+TGG | 0.656808 | 5.4:-46775526 | MS.gene94104:CDS |
| ATTTGGTGACGATGAATCCG+AGG | 0.661125 | 5.4:+46776031 | None:intergenic |
| ATATAGTGTGGGATTCATCA+CGG | 0.661845 | 5.4:-46775334 | MS.gene94104:CDS |
| TGAATCCGAGGTGTAGCCCG+TGG | 0.667858 | 5.4:+46776043 | None:intergenic |
| CTCCCACGTCTCATGCACCA+CGG | 0.673317 | 5.4:-46781171 | MS.gene94104:CDS |
| TTGGAAGTAAAAGGCCCCGT+GGG | 0.673786 | 5.4:-46775639 | MS.gene94104:CDS |
| GTTACTACTGATGAATGTGA+TGG | 0.676878 | 5.4:-46780601 | MS.gene94104:CDS |
| TGTTGTTTATGCAAACCGGA+CGG | 0.678346 | 5.4:-46775460 | MS.gene94104:CDS |
| AACGTGTGTAGGCCCCACAA+AGG | 0.681655 | 5.4:-46776440 | MS.gene94104:CDS |
| TGTCCCAAAAGCTCGTTGGG+AGG | 0.683469 | 5.4:-46781103 | MS.gene94104:CDS |
| TGTTTATGCAAACCGGACGG+AGG | 0.684105 | 5.4:-46775457 | MS.gene94104:CDS |
| TCATCACGGAGAGTATCATG+AGG | 0.693280 | 5.4:-46775320 | MS.gene94104:CDS |
| CGGTGGGACTGGAATCACAC+CGG | 0.698068 | 5.4:-46775538 | MS.gene94104:CDS |
| ACAGCAAATTGAATCATAGG+TGG | 0.698548 | 5.4:+46775246 | None:intergenic |
| CAACCAGGTAACCAATCAGG+TGG | 0.700340 | 5.4:-46776386 | MS.gene94104:CDS |
| ATTGGAAGTAAAAGGCCCCG+TGG | 0.700420 | 5.4:-46775640 | MS.gene94104:CDS |
| TTCCTTAAAGACCATCCCGG+TGG | 0.711835 | 5.4:-46776179 | MS.gene94104:CDS |
| TTCCACCATTAGGAAACCTG+GGG | 0.712795 | 5.4:+46775703 | None:intergenic |
| CATCACGGAGAGTATCATGA+GGG | 0.715577 | 5.4:-46775319 | MS.gene94104:CDS |
| AACCGTGGTGCATGAGACGT+GGG | 0.717162 | 5.4:+46781169 | None:intergenic |
| TAAACTCATGGACTACGCAG+AGG | 0.720380 | 5.4:-46780015 | MS.gene94104:CDS |
| TGCAGTCGTAGACATTACCG+TGG | 0.729274 | 5.4:+46776207 | None:intergenic |
| GATACTCAATGTGTCCCACG+GGG | 0.743569 | 5.4:+46775625 | None:intergenic |
| GTTGAGGTAACAATGGACGG+TGG | 0.751687 | 5.4:-46777696 | MS.gene94104:CDS |
| GAACTGGAGTGATGAAACCG+TGG | 0.773422 | 5.4:+46781154 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTTAATTTTTTT+TGG | - | chr5.4:46777909-46777928 | MS.gene94104:intron | 0.0% |
| !! | AAAATGAAAAAATTGTTTAA+TGG | + | chr5.4:46776863-46776882 | None:intergenic | 10.0% |
| !! | AGTGTTTAATTATATATTTA+TGG | + | chr5.4:46777641-46777660 | None:intergenic | 10.0% |
| !! | ATTTAATTCATATACAATAA+CGG | + | chr5.4:46779671-46779690 | None:intergenic | 10.0% |
| !! | TTTGTACAAATATTAAATAT+TGG | + | chr5.4:46778575-46778594 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAATTTTACAGT+GGG | - | chr5.4:46777569-46777588 | MS.gene94104:CDS | 10.0% |
| !!! | AAAAAAAAATATTTTACAAG+GGG | + | chr5.4:46777315-46777334 | None:intergenic | 10.0% |
| !!! | AACTAATATCAATTTAATTT+AGG | - | chr5.4:46777717-46777736 | MS.gene94104:CDS | 10.0% |
| !!! | CAAAAAAAAATATTTTACAA+GGG | + | chr5.4:46777316-46777335 | None:intergenic | 10.0% |
| !!! | TCAAAAAAAAATATTTTACA+AGG | + | chr5.4:46777317-46777336 | None:intergenic | 10.0% |
| !! | AAAAAAAAACACAAAACTAA+CGG | + | chr5.4:46778525-46778544 | None:intergenic | 15.0% |
| !! | AAAAAAAAACACAAAACTAT+TGG | - | chr5.4:46778394-46778413 | MS.gene94104:intron | 15.0% |
| !! | AAATTACAATCAAAGTTAAT+TGG | - | chr5.4:46778239-46778258 | MS.gene94104:intron | 15.0% |
| !! | AATAGCAAAAAAATATGAAA+AGG | + | chr5.4:46776389-46776408 | None:intergenic | 15.0% |
| !! | AATGTTATTCTTAACTTTAT+TGG | + | chr5.4:46776469-46776488 | None:intergenic | 15.0% |
| !! | CAAATATTAAATATTGGTAT+TGG | + | chr5.4:46778569-46778588 | None:intergenic | 15.0% |
| !! | CAGTTGAATAAATAAATATA+GGG | - | chr5.4:46777247-46777266 | MS.gene94104:intron | 15.0% |
| !! | CTTGTAATTTGAAAAAATTT+CGG | - | chr5.4:46777428-46777447 | MS.gene94104:intron | 15.0% |
| !! | CTTTGTAAAAATATTGTTAT+TGG | - | chr5.4:46778462-46778481 | MS.gene94104:intron | 15.0% |
| !! | GCTATATATCTTAATTTAAA+TGG | + | chr5.4:46779206-46779225 | None:intergenic | 15.0% |
| !! | TAACAACAATAAAATTAACT+TGG | + | chr5.4:46778684-46778703 | None:intergenic | 15.0% |
| !! | TAATTACTATATATCTTAGT+TGG | + | chr5.4:46779346-46779365 | None:intergenic | 15.0% |
| !! | TCAGTTGAATAAATAAATAT+AGG | - | chr5.4:46777246-46777265 | MS.gene94104:intron | 15.0% |
| !!! | AGTTTCTTTTTATTTTTTTG+AGG | - | chr5.4:46777072-46777091 | MS.gene94104:intron | 15.0% |
| !!! | CAAAAAAAAAAATTTTACAG+TGG | - | chr5.4:46777568-46777587 | MS.gene94104:CDS | 15.0% |
| !!! | GTTAATTTTATTGTTGTTAT+TGG | - | chr5.4:46778685-46778704 | MS.gene94104:intron | 15.0% |
| !!! | GTTTCTTTTTATTTTTTTGA+GGG | - | chr5.4:46777073-46777092 | MS.gene94104:intron | 15.0% |
| !!! | TTTTGTAATTTTTTTCCTTA+AGG | - | chr5.4:46777977-46777996 | MS.gene94104:intron | 15.0% |
| !!! | TTTTGTAGTTTTTTTTCTTA+GGG | + | chr5.4:46777793-46777812 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATGATTGGTTTA+TGG | + | chr5.4:46779949-46779968 | None:intergenic | 15.0% |
| !! | AAACCATATGTAGAATATTA+TGG | + | chr5.4:46779499-46779518 | None:intergenic | 20.0% |
| !! | AAGATATATAGCTAGTATAT+TGG | - | chr5.4:46779214-46779233 | MS.gene94104:intron | 20.0% |
| !! | AATTAAGTCCACAAAAAAAA+AGG | + | chr5.4:46778084-46778103 | None:intergenic | 20.0% |
| !! | ACACAACTATGATTAATTAA+AGG | - | chr5.4:46779923-46779942 | MS.gene94104:intron | 20.0% |
| !! | AGATTTATCCTACTTATTAT+TGG | - | chr5.4:46776160-46776179 | MS.gene94104:CDS | 20.0% |
| !! | ATACCATAATATTCTACATA+TGG | - | chr5.4:46779493-46779512 | MS.gene94104:intron | 20.0% |
| !! | ATTACCATTATAAGGATAAT+AGG | - | chr5.4:46776092-46776111 | MS.gene94104:CDS | 20.0% |
| !! | ATTTGACAAGTTGTATAATT+TGG | - | chr5.4:46778844-46778863 | MS.gene94104:intron | 20.0% |
| !! | CAAAAAATCTTCAAATTTCA+AGG | + | chr5.4:46777347-46777366 | None:intergenic | 20.0% |
| !! | CAACAAAATATGGAAAATAT+TGG | - | chr5.4:46779036-46779055 | MS.gene94104:intron | 20.0% |
| !! | CATTCAATAAATTATGTATG+TGG | - | chr5.4:46779819-46779838 | MS.gene94104:intron | 20.0% |
| !! | CATTTAATAAATGTTGTATG+TGG | + | chr5.4:46779858-46779877 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAATATTGGTAT+TGG | - | chr5.4:46778349-46778368 | MS.gene94104:intron | 20.0% |
| !! | GTAAAAACATATACATCATT+TGG | - | chr5.4:46779594-46779613 | MS.gene94104:intron | 20.0% |
| !! | TAACATAAAACAAAATCCTT+AGG | + | chr5.4:46776438-46776457 | None:intergenic | 20.0% |
| !! | TCAATATGATATGACATATT+AGG | + | chr5.4:46779453-46779472 | None:intergenic | 20.0% |
| !! | TCATGTATTCTTAACTTTAT+TGG | - | chr5.4:46776522-46776541 | MS.gene94104:intron | 20.0% |
| !! | TGTACTATAAATTTAGTGTT+AGG | - | chr5.4:46779272-46779291 | MS.gene94104:intron | 20.0% |
| !! | TTACCATTATAAGGATAATA+GGG | - | chr5.4:46776093-46776112 | MS.gene94104:CDS | 20.0% |
| !! | TTTCTTTGCATAGAATATTT+GGG | - | chr5.4:46776805-46776824 | MS.gene94104:intron | 20.0% |
| !!! | AAATCTTATTTGGAATGTTA+TGG | - | chr5.4:46779160-46779179 | MS.gene94104:intron | 20.0% |
| !!! | AATTTTTTCAAATTACAAGG+AGG | + | chr5.4:46777427-46777446 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTGTTTGGAAT+TGG | - | chr5.4:46778318-46778337 | MS.gene94104:intron | 20.0% |
| !!! | ATCATTATTTTATGAGTATG+TGG | - | chr5.4:46780031-46780050 | MS.gene94104:CDS | 20.0% |
| !!! | ATTGCATTTTCATTAGATTT+TGG | - | chr5.4:46778282-46778301 | MS.gene94104:intron | 20.0% |
| !!! | ATTTGAAGATTTTTTGGTTT+TGG | - | chr5.4:46777351-46777370 | MS.gene94104:intron | 20.0% |
| !!! | ATTTTTTCAAATTACAAGGA+GGG | + | chr5.4:46777426-46777445 | None:intergenic | 20.0% |
| !!! | CAATATTTTCCATATTTTGT+TGG | + | chr5.4:46779038-46779057 | None:intergenic | 20.0% |
| !!! | CGAAATTTTTTCAAATTACA+AGG | + | chr5.4:46777430-46777449 | None:intergenic | 20.0% |
| !!! | CTAAATTTTCTCAAATTACA+GGG | + | chr5.4:46777398-46777417 | None:intergenic | 20.0% |
| !!! | CTTGAAATTTGAAGATTTTT+TGG | - | chr5.4:46777345-46777364 | MS.gene94104:intron | 20.0% |
| !!! | GTTTTGTAGTTTTTTTTCTT+AGG | + | chr5.4:46777794-46777813 | None:intergenic | 20.0% |
| !!! | TAATTTGATGTTTTCATTCA+AGG | - | chr5.4:46776714-46776733 | MS.gene94104:intron | 20.0% |
| !!! | TAGATTTTTTTTCTTTTCCA+TGG | + | chr5.4:46777189-46777208 | None:intergenic | 20.0% |
| !!! | TTTGTAGTTTTTTTTCTTAG+GGG | + | chr5.4:46777792-46777811 | None:intergenic | 20.0% |
| !!! | TTTTAACAGAAATTTAACAG+AGG | + | chr5.4:46778377-46778396 | None:intergenic | 20.0% |
| !!! | TTTTAATTTTTTTTGGCCTT+GGG | - | chr5.4:46777916-46777935 | MS.gene94104:intron | 20.0% |
| !!! | TTTTATTTTAGATAGTCATG+AGG | - | chr5.4:46777663-46777682 | MS.gene94104:CDS | 20.0% |
| !!! | TTTTTAATTTTTTTTGGCCT+TGG | - | chr5.4:46777915-46777934 | MS.gene94104:intron | 20.0% |
| ! | AAAATAATGATGCCATTAAC+TGG | + | chr5.4:46780022-46780041 | None:intergenic | 25.0% |
| ! | AAAATGCAACTTTATACCTA+AGG | - | chr5.4:46776419-46776438 | MS.gene94104:CDS | 25.0% |
| ! | AAACACAAAACTATTGGTAT+TGG | - | chr5.4:46778400-46778419 | MS.gene94104:intron | 25.0% |
| ! | AAATAATGATGCCATTAACT+GGG | + | chr5.4:46780021-46780040 | None:intergenic | 25.0% |
| ! | AACAAAAATTACGTTACATC+TGG | - | chr5.4:46777136-46777155 | MS.gene94104:intron | 25.0% |
| ! | AAGTAGAAAACTTTGACATT+AGG | + | chr5.4:46778160-46778179 | None:intergenic | 25.0% |
| ! | AATATGGAAAATATTGGTGT+TGG | - | chr5.4:46779042-46779061 | MS.gene94104:intron | 25.0% |
| ! | AATTGTATCACAATGATTTG+TGG | + | chr5.4:46779974-46779993 | None:intergenic | 25.0% |
| ! | ACAAAATTGAAGATATGTCA+GGG | + | chr5.4:46777491-46777510 | None:intergenic | 25.0% |
| ! | AGAAATGACTTATATTACAG+GGG | + | chr5.4:46777287-46777306 | None:intergenic | 25.0% |
| ! | ATACATTTCAGTTTGATCAT+TGG | + | chr5.4:46781189-46781208 | None:intergenic | 25.0% |
| ! | ATCTATATGAATGTGTCAAA+CGG | + | chr5.4:46778748-46778767 | None:intergenic | 25.0% |
| ! | CACATTCATATAGATCAAAA+TGG | - | chr5.4:46778753-46778772 | MS.gene94104:intron | 25.0% |
| ! | CAGAAATGACTTATATTACA+GGG | + | chr5.4:46777288-46777307 | None:intergenic | 25.0% |
| ! | CATCTGGTTAATAAATTAAG+AGG | - | chr5.4:46777152-46777171 | MS.gene94104:intron | 25.0% |
| ! | CCAAAAATCTTCAAATTACA+AGG | - | chr5.4:46777538-46777557 | MS.gene94104:CDS | 25.0% |
| ! | CCTGTAATTTGAGAAAATTT+AGG | - | chr5.4:46777396-46777415 | MS.gene94104:intron | 25.0% |
| ! | CTTTCTTTGCATAGAATATT+TGG | - | chr5.4:46776804-46776823 | MS.gene94104:intron | 25.0% |
| ! | TAATATTTGTACAAAGTGCA+GGG | - | chr5.4:46778580-46778599 | MS.gene94104:intron | 25.0% |
| ! | TACAAAATTGAAGATATGTC+AGG | + | chr5.4:46777492-46777511 | None:intergenic | 25.0% |
| ! | TATGAATCTCATTTGACATT+AGG | + | chr5.4:46778115-46778134 | None:intergenic | 25.0% |
| ! | TTAATATTTGTACAAAGTGC+AGG | - | chr5.4:46778579-46778598 | MS.gene94104:intron | 25.0% |
| ! | TTCATATAGATCAAAATGGT+TGG | - | chr5.4:46778757-46778776 | MS.gene94104:intron | 25.0% |
| ! | TTTAACAGAAAGTTAACAGA+GGG | - | chr5.4:46778542-46778561 | MS.gene94104:intron | 25.0% |
| !! | AAATTTGCTCAAATTAACAG+GGG | + | chr5.4:46777459-46777478 | None:intergenic | 25.0% |
| !! | ACACACTAATGAAATTCTTT+TGG | - | chr5.4:46780153-46780172 | MS.gene94104:intron | 25.0% |
| !! | ACATTCCAAATAAGATTTTC+AGG | + | chr5.4:46779158-46779177 | None:intergenic | 25.0% |
| !! | AGCTCATTGATTATATATTC+TGG | + | chr5.4:46776583-46776602 | None:intergenic | 25.0% |
| !! | CCTAAATTTTCTCAAATTAC+AGG | + | chr5.4:46777399-46777418 | None:intergenic | 25.0% |
| !! | CCTTGTAATTTGAAGATTTT+TGG | + | chr5.4:46777541-46777560 | None:intergenic | 25.0% |
| !! | CTGTTAATTTGAGCAAATTT+CGG | - | chr5.4:46777459-46777478 | MS.gene94104:intron | 25.0% |
| !! | GAAATTTGCTCAAATTAACA+GGG | + | chr5.4:46777460-46777479 | None:intergenic | 25.0% |
| !! | TTATTCAACTGCAAATTTTG+TGG | + | chr5.4:46776777-46776796 | None:intergenic | 25.0% |
| !! | TTTTAACAGAAAGTTAACAG+AGG | - | chr5.4:46778541-46778560 | MS.gene94104:intron | 25.0% |
| !!! | AAGAAACTAACATTTTTAGC+CGG | - | chr5.4:46781110-46781129 | MS.gene94104:CDS | 25.0% |
| !!! | AGAATATTTGGGATATTTTG+AGG | - | chr5.4:46776816-46776835 | MS.gene94104:intron | 25.0% |
| !!! | ATTACAGTCCTTTTTTTTTG+TGG | - | chr5.4:46778073-46778092 | MS.gene94104:intron | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+AGG | + | chr5.4:46778345-46778364 | None:intergenic | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | + | chr5.4:46778345-46778364 | None:intergenic | 25.0% |
| !!! | GAATATTTGGGATATTTTGA+GGG | - | chr5.4:46776817-46776836 | MS.gene94104:intron | 25.0% |
| !!! | TAATGAAATTCTTTTGGTGT+TGG | - | chr5.4:46780159-46780178 | MS.gene94104:intron | 25.0% |
| !!! | TGTGGTCTTTTTTTTATGAT+TGG | + | chr5.4:46779956-46779975 | None:intergenic | 25.0% |
| !!! | TTAGACAAAGACAACTTTTT+TGG | + | chr5.4:46776995-46777014 | None:intergenic | 25.0% |
| !!! | TTGTAGTTTTTTTTCTTAGG+GGG | + | chr5.4:46777791-46777810 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTTTGGCCTTG+GGG | - | chr5.4:46777917-46777936 | MS.gene94104:intron | 25.0% |
| !!! | TTTTCATTAGATTTTGGCAT+TGG | - | chr5.4:46778288-46778307 | MS.gene94104:intron | 25.0% |
| AAAATTGAAGATATGTCAGG+GGG | + | chr5.4:46777489-46777508 | None:intergenic | 30.0% | |
| AACCTAATTTGGAAAAGATG+GGG | - | chr5.4:46781447-46781466 | MS.gene94104:CDS | 30.0% | |
| AAGTTGTATAATTTGGTACG+TGG | - | chr5.4:46778851-46778870 | MS.gene94104:intron | 30.0% | |
| AAGTTGTCTTTGTCTAAACA+TGG | - | chr5.4:46776998-46777017 | MS.gene94104:intron | 30.0% | |
| AATATGAGATCCAATACTTG+AGG | + | chr5.4:46779382-46779401 | None:intergenic | 30.0% | |
| AATATGGAACTAGTATTAGG+AGG | - | chr5.4:46775897-46775916 | MS.gene94104:CDS | 30.0% | |
| ACTATGCTCCAATAATAAGT+AGG | + | chr5.4:46776171-46776190 | None:intergenic | 30.0% | |
| ACTTGGTTTAAATGTGTCAT+TGG | + | chr5.4:46778667-46778686 | None:intergenic | 30.0% | |
| AGAGCCATGATTTCTTTAAT+AGG | + | chr5.4:46780702-46780721 | None:intergenic | 30.0% | |
| AGCCATGATTTCTTTAATAG+GGG | + | chr5.4:46780700-46780719 | None:intergenic | 30.0% | |
| AGTTGTCTTTGTCTAAACAT+GGG | - | chr5.4:46776999-46777018 | MS.gene94104:intron | 30.0% | |
| ATAGTGATAGGTTCAAGATT+TGG | - | chr5.4:46781279-46781298 | MS.gene94104:CDS | 30.0% | |
| ATATGGAACTAGTATTAGGA+GGG | - | chr5.4:46775898-46775917 | MS.gene94104:CDS | 30.0% | |
| ATTAATCCGAAAAACCAACT+TGG | - | chr5.4:46775358-46775377 | MS.gene94104:CDS | 30.0% | |
| CAAAATTGAAGATATGTCAG+GGG | + | chr5.4:46777490-46777509 | None:intergenic | 30.0% | |
| CAACCTAATTTGGAAAAGAT+GGG | - | chr5.4:46781446-46781465 | MS.gene94104:CDS | 30.0% | |
| CCAGAAAAACCAACAAAATA+TGG | - | chr5.4:46779026-46779045 | MS.gene94104:intron | 30.0% | |
| CCAGAAATGACTTATATTAC+AGG | + | chr5.4:46777289-46777308 | None:intergenic | 30.0% | |
| CCTGCACTTTGTAAAAATAT+TGG | - | chr5.4:46778343-46778362 | MS.gene94104:intron | 30.0% | |
| CCTGTAATATAAGTCATTTC+TGG | - | chr5.4:46777286-46777305 | MS.gene94104:intron | 30.0% | |
| CGAAATATGGAACTAGTATT+AGG | - | chr5.4:46775894-46775913 | MS.gene94104:CDS | 30.0% | |
| CTGAAAGGTTATTCATATTC+AGG | - | chr5.4:46776685-46776704 | MS.gene94104:intron | 30.0% | |
| GAACCCTATTATCCTTATAA+TGG | + | chr5.4:46776099-46776118 | None:intergenic | 30.0% | |
| GAGCCATGATTTCTTTAATA+GGG | + | chr5.4:46780701-46780720 | None:intergenic | 30.0% | |
| GATAAATCTACCTTCTTCAT+TGG | + | chr5.4:46776149-46776168 | None:intergenic | 30.0% | |
| TACATGACAACAAAATCCTT+AGG | + | chr5.4:46776509-46776528 | None:intergenic | 30.0% | |
| TATAGATCAAAATGGTTGGT+TGG | - | chr5.4:46778761-46778780 | MS.gene94104:intron | 30.0% | |
| TCTTACATCATGTGAAATTG+AGG | + | chr5.4:46780766-46780785 | None:intergenic | 30.0% | |
| TCTTAGTTGGTCAATTTCTT+TGG | + | chr5.4:46779333-46779352 | None:intergenic | 30.0% | |
| TGATGGTCATTACCATTATA+AGG | - | chr5.4:46776084-46776103 | MS.gene94104:CDS | 30.0% | |
| TGTACTGTCAAAATTCATGA+AGG | - | chr5.4:46777508-46777527 | MS.gene94104:intron | 30.0% | |
| TTGCTCGAAGATTATAGAAT+CGG | - | chr5.4:46780591-46780610 | MS.gene94104:CDS | 30.0% | |
| TTGTGGAAAATGCAAATGAA+GGG | - | chr5.4:46781306-46781325 | MS.gene94104:CDS | 30.0% | |
| TTTGAAGATGTGTTCATGAA+TGG | + | chr5.4:46780381-46780400 | None:intergenic | 30.0% | |
| ! | AATTTTACAGTGGGTAAAAC+CGG | - | chr5.4:46777578-46777597 | MS.gene94104:CDS | 30.0% |
| ! | ACCAATTTAGACTTGTTCTA+CGG | - | chr5.4:46779536-46779555 | MS.gene94104:intron | 30.0% |
| ! | ACTTTTCTTGAGAATTGGTT+TGG | + | chr5.4:46780349-46780368 | None:intergenic | 30.0% |
| ! | ATGGTTTCCTTTTTCTTCAT+AGG | - | chr5.4:46779512-46779531 | MS.gene94104:intron | 30.0% |
| ! | ATTGGTTCCTATGAAGAAAA+AGG | + | chr5.4:46779522-46779541 | None:intergenic | 30.0% |
| ! | CCAAACAAAAAAAAAGTGCA+GGG | + | chr5.4:46778315-46778334 | None:intergenic | 30.0% |
| ! | CGAAATTTGCTCAAATTAAC+AGG | + | chr5.4:46777461-46777480 | None:intergenic | 30.0% |
| ! | GAGATACTTTTCTTGAGAAT+TGG | + | chr5.4:46780354-46780373 | None:intergenic | 30.0% |
| ! | TCCAAACAAAAAAAAAGTGC+AGG | + | chr5.4:46778316-46778335 | None:intergenic | 30.0% |
| ! | TCTTGGTAGAGGAAATTTTT+CGG | - | chr5.4:46781064-46781083 | MS.gene94104:CDS | 30.0% |
| ! | TGTATGTTGTTTATGCAAAC+CGG | - | chr5.4:46781204-46781223 | MS.gene94104:CDS | 30.0% |
| ! | TTTTAGCCAAGTCATTTCAT+GGG | + | chr5.4:46780064-46780083 | None:intergenic | 30.0% |
| !! | AATTTTGATCTCTCACGTTA+AGG | + | chr5.4:46778224-46778243 | None:intergenic | 30.0% |
| !! | ACTTTATTGGTTTGTCTTTG+TGG | - | chr5.4:46776535-46776554 | MS.gene94104:intron | 30.0% |
| !! | ATCGCAACTTTTGAAAAGTT+AGG | + | chr5.4:46777763-46777782 | None:intergenic | 30.0% |
| !! | ATTTTAGCCAAGTCATTTCA+TGG | + | chr5.4:46780065-46780084 | None:intergenic | 30.0% |
| !! | CCAATATTTTTACAAAGTGC+AGG | + | chr5.4:46778346-46778365 | None:intergenic | 30.0% |
| !! | CTTTATTGGTTTGTCTTTGT+GGG | - | chr5.4:46776536-46776555 | MS.gene94104:intron | 30.0% |
| !! | GACAGATCTAAAAGTATCAT+TGG | + | chr5.4:46776966-46776985 | None:intergenic | 30.0% |
| !! | GTTATTATACCGGGTTTTAT+CGG | - | chr5.4:46776010-46776029 | MS.gene94104:CDS | 30.0% |
| !! | TCGCAACTTTTGAAAAGTTA+GGG | + | chr5.4:46777762-46777781 | None:intergenic | 30.0% |
| !! | TGGTTTTTCGGATTAATTCT+TGG | + | chr5.4:46775355-46775374 | None:intergenic | 30.0% |
| !! | TTTTGGTTGAAAACTGACAT+TGG | - | chr5.4:46778908-46778927 | MS.gene94104:intron | 30.0% |
| !!! | ATTTTGTTGGTTTTTCTGGA+TGG | + | chr5.4:46779025-46779044 | None:intergenic | 30.0% |
| !!! | CACTTTTTTTTGTTTGGCAT+TGG | + | chr5.4:46778607-46778626 | None:intergenic | 30.0% |
| !!! | CCAAATAAGATTTTCAGGTT+GGG | + | chr5.4:46779153-46779172 | None:intergenic | 30.0% |
| !!! | CCATATTTTGTTGGTTTTTC+TGG | + | chr5.4:46779029-46779048 | None:intergenic | 30.0% |
| !!! | TCCAAATAAGATTTTCAGGT+TGG | + | chr5.4:46779154-46779173 | None:intergenic | 30.0% |
| !!! | TGGAGCATAGTTTTAAATTG+CGG | - | chr5.4:46776180-46776199 | MS.gene94104:CDS | 30.0% |
| !!! | TTAATTTTTTTTGGCCTTGG+GGG | - | chr5.4:46777918-46777937 | MS.gene94104:intron | 30.0% |
| !!! | TTTTGATTTGCTTGTACCTA+AGG | - | chr5.4:46776490-46776509 | MS.gene94104:intron | 30.0% |
| AAACTCAGAATTTCCATGCA+TGG | + | chr5.4:46780667-46780686 | None:intergenic | 35.0% | |
| AACTAAACCGGTTACTTCAA+CGG | + | chr5.4:46775597-46775616 | None:intergenic | 35.0% | |
| ACACGACATTTGTCAAACAT+CGG | - | chr5.4:46776357-46776376 | MS.gene94104:CDS | 35.0% | |
| ACAGCAAATTGAATCATAGG+TGG | + | chr5.4:46781425-46781444 | None:intergenic | 35.0% | |
| AGATCTTGCCTATAAACTCA+TGG | - | chr5.4:46776641-46776660 | MS.gene94104:intron | 35.0% | |
| ATATAGTGTGGGATTCATCA+CGG | - | chr5.4:46781334-46781353 | MS.gene94104:CDS | 35.0% | |
| ATGTGTCAGTGACTAATTCA+AGG | + | chr5.4:46776223-46776242 | None:intergenic | 35.0% | |
| ATTCTTGCTTACATGCAGAA+TGG | - | chr5.4:46775950-46775969 | MS.gene94104:CDS | 35.0% | |
| CAGACGTAAAGAACAAAACA+TGG | - | chr5.4:46775703-46775722 | MS.gene94104:CDS | 35.0% | |
| CCCAACCTGAAAATCTTATT+TGG | - | chr5.4:46779150-46779169 | MS.gene94104:intron | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | + | chr5.4:46777600-46777619 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr5.4:46777598-46777617 | MS.gene94104:CDS | 35.0% | |
| CTACAGTTGCAAAACTTAAG+GGG | - | chr5.4:46777951-46777970 | MS.gene94104:intron | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr5.4:46777600-46777619 | MS.gene94104:CDS | 35.0% | |
| GATGGGGTATGATATTAAGA+AGG | - | chr5.4:46781463-46781482 | MS.gene94104:CDS | 35.0% | |
| GCAACCTAATTTGGAAAAGA+TGG | - | chr5.4:46781445-46781464 | MS.gene94104:CDS | 35.0% | |
| GCTACAGTTGCAAAACTTAA+GGG | - | chr5.4:46777950-46777969 | MS.gene94104:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr5.4:46777599-46777618 | MS.gene94104:CDS | 35.0% | |
| GGAGGATGATATATTGTTGA+GGG | - | chr5.4:46781229-46781248 | MS.gene94104:CDS | 35.0% | |
| GGGCAAAGATTTATAGTGAT+AGG | - | chr5.4:46781267-46781286 | MS.gene94104:CDS | 35.0% | |
| GTAATCACAAACGTCAGTAT+AGG | - | chr5.4:46776334-46776353 | MS.gene94104:CDS | 35.0% | |
| GTTACTACTGATGAATGTGA+TGG | - | chr5.4:46776067-46776086 | MS.gene94104:CDS | 35.0% | |
| GTTGTGGAAAATGCAAATGA+AGG | - | chr5.4:46781305-46781324 | MS.gene94104:CDS | 35.0% | |
| GTTTAGTTAAAAACCCAACC+CGG | - | chr5.4:46775609-46775628 | MS.gene94104:CDS | 35.0% | |
| TATATTGTTGAGGGAAGAGT+TGG | - | chr5.4:46781238-46781257 | MS.gene94104:CDS | 35.0% | |
| TATGCCAATTTCTCCTTTGT+GGG | + | chr5.4:46780244-46780263 | None:intergenic | 35.0% | |
| TATTTAGACTCCCTCACTAT+TGG | - | chr5.4:46780999-46781018 | MS.gene94104:CDS | 35.0% | |
| TCATGGATGAAATTGTTGCT+GGG | + | chr5.4:46775254-46775273 | None:intergenic | 35.0% | |
| TCCGTAGAACAAGTCTAAAT+TGG | + | chr5.4:46779540-46779559 | None:intergenic | 35.0% | |
| TGAAACATAGACACGATCAT+CGG | - | chr5.4:46776296-46776315 | MS.gene94104:CDS | 35.0% | |
| TGCACAGCAAATTGAATCAT+AGG | + | chr5.4:46781428-46781447 | None:intergenic | 35.0% | |
| TGCCCCTATTAAAGAAATCA+TGG | - | chr5.4:46780695-46780714 | MS.gene94104:CDS | 35.0% | |
| TGCTACAGTTGCAAAACTTA+AGG | - | chr5.4:46777949-46777968 | MS.gene94104:intron | 35.0% | |
| TGTATAATTTGGTACGTGGT+AGG | - | chr5.4:46778855-46778874 | MS.gene94104:intron | 35.0% | |
| TTAACTCCCATGAAATGACT+TGG | - | chr5.4:46780055-46780074 | MS.gene94104:CDS | 35.0% | |
| TTTCCATGCATGGAGTTATT+TGG | + | chr5.4:46780657-46780676 | None:intergenic | 35.0% | |
| ! | AAGTTGCTTACATTTGAGAC+CGG | + | chr5.4:46779783-46779802 | None:intergenic | 35.0% |
| ! | CAAAATCTGATGAAAGTGCA+GGG | - | chr5.4:46778640-46778659 | MS.gene94104:intron | 35.0% |
| ! | CATGAGTGTGTTATCTCTTT+TGG | - | chr5.4:46778891-46778910 | MS.gene94104:intron | 35.0% |
| ! | CTGATTCTCTGAGCTAATTT+TGG | + | chr5.4:46777230-46777249 | None:intergenic | 35.0% |
| ! | GCCAAACAAAAAAAAGTGCA+GGG | - | chr5.4:46778609-46778628 | MS.gene94104:intron | 35.0% |
| ! | GTTCAAGATTTGGTATGTTG+TGG | - | chr5.4:46781289-46781308 | MS.gene94104:CDS | 35.0% |
| ! | TACCCCATCTTTTCCAAATT+AGG | + | chr5.4:46781452-46781471 | None:intergenic | 35.0% |
| ! | TGCCAAACAAAAAAAAGTGC+AGG | - | chr5.4:46778608-46778627 | MS.gene94104:intron | 35.0% |
| ! | TGGTGGTGTACTTTGTTATA+GGG | - | chr5.4:46778928-46778947 | MS.gene94104:intron | 35.0% |
| ! | TGTTTTACCCCCTGTAATAT+AGG | + | chr5.4:46777610-46777629 | None:intergenic | 35.0% |
| ! | TTTTCATTCAATACTCCCTC+CGG | - | chr5.4:46779761-46779780 | MS.gene94104:intron | 35.0% |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | + | chr5.4:46777945-46777964 | None:intergenic | 35.0% |
| ! | TTTTTGCAATGAGCTTGCAT+GGG | + | chr5.4:46780743-46780762 | None:intergenic | 35.0% |
| !! | ATTTGCTGTGCAACCTAATT+TGG | - | chr5.4:46781436-46781455 | MS.gene94104:CDS | 35.0% |
| !! | CGCAACTTTTGAAAAGTTAG+GGG | + | chr5.4:46777761-46777780 | None:intergenic | 35.0% |
| !! | CTTTCATCAGATTTTGGCAT+TGG | + | chr5.4:46778636-46778655 | None:intergenic | 35.0% |
| !! | GCAACTTTTGAAAAGTTAGG+GGG | + | chr5.4:46777760-46777779 | None:intergenic | 35.0% |
| !! | GGTTGGGTTTTTAACTAAAC+CGG | + | chr5.4:46775609-46775628 | None:intergenic | 35.0% |
| !! | TTGGTGGTGTACTTTGTTAT+AGG | - | chr5.4:46778927-46778946 | MS.gene94104:intron | 35.0% |
| !! | TTTGGTGTTGGCAATTTACA+GGG | - | chr5.4:46780171-46780190 | MS.gene94104:intron | 35.0% |
| !!! | AAACTAACATTTTTAGCCGG+TGG | - | chr5.4:46781113-46781132 | MS.gene94104:CDS | 35.0% |
| !!! | AACAAAGCGTTGGTTTTAAC+TGG | - | chr5.4:46775729-46775748 | MS.gene94104:CDS | 35.0% |
| !!! | AACTAACATTTTTAGCCGGT+GGG | - | chr5.4:46781114-46781133 | MS.gene94104:CDS | 35.0% |
| !!! | AATATTGGTGTTGGTGCTTT+TGG | - | chr5.4:46779051-46779070 | MS.gene94104:intron | 35.0% |
| !!! | ACAAAGCGTTGGTTTTAACT+GGG | - | chr5.4:46775730-46775749 | MS.gene94104:CDS | 35.0% |
| !!! | CAACTTCCAAGTTGGTTTTT+CGG | + | chr5.4:46775367-46775386 | None:intergenic | 35.0% |
| !!! | CCCTGCACTTTTTTTTTGTT+TGG | - | chr5.4:46778312-46778331 | MS.gene94104:intron | 35.0% |
| !!! | GCGGTTCATGTTTGTTTTTA+CGG | - | chr5.4:46775842-46775861 | MS.gene94104:CDS | 35.0% |
| !!! | TAATTTTTTTTGGCCTTGGG+GGG | - | chr5.4:46777919-46777938 | MS.gene94104:intron | 35.0% |
| !!! | TCCCTGCACTTTTTTTTGTT+TGG | + | chr5.4:46778613-46778632 | None:intergenic | 35.0% |
| !!! | TTGCAAATCTTTGTTTTCCG+TGG | + | chr5.4:46781091-46781110 | None:intergenic | 35.0% |
| !!! | TTTTGGTGTTGGCAATTTAC+AGG | - | chr5.4:46780170-46780189 | MS.gene94104:intron | 35.0% |
| !!! | TTTTTGGTTTTGGACCTTCA+TGG | - | chr5.4:46777361-46777380 | MS.gene94104:intron | 35.0% |
| AACATGGTGAAACAAAGCGT+TGG | - | chr5.4:46775719-46775738 | MS.gene94104:CDS | 40.0% | |
| AAGAGGAGATACTTGTACCA+TGG | - | chr5.4:46777169-46777188 | MS.gene94104:intron | 40.0% | |
| AAGATACTCAATGTGTCCCA+CGG | + | chr5.4:46781048-46781067 | None:intergenic | 40.0% | |
| ACAAAACCCTTGATTCTGCT+TGG | - | chr5.4:46780430-46780449 | MS.gene94104:intron | 40.0% | |
| ACAATATATCATCCTCCGTC+CGG | + | chr5.4:46781226-46781245 | None:intergenic | 40.0% | |
| ACCAGCACAAACAAGTGTAA+CGG | + | chr5.4:46775681-46775700 | None:intergenic | 40.0% | |
| ATCGCAACTACGTGAAAGTT+AGG | - | chr5.4:46778007-46778026 | MS.gene94104:intron | 40.0% | |
| ATGAAGGAACGTTAGACAAC+TGG | - | chr5.4:46775411-46775430 | MS.gene94104:CDS | 40.0% | |
| ATGCCAATTTCTCCTTTGTG+GGG | + | chr5.4:46780243-46780262 | None:intergenic | 40.0% | |
| ATTCCACCATTAGGAAACCT+GGG | + | chr5.4:46780969-46780988 | None:intergenic | 40.0% | |
| ATTGGTTACCTGGTTGTGTT+GGG | + | chr5.4:46780278-46780297 | None:intergenic | 40.0% | |
| ATTTCATCGACGCTACTTGT+TGG | + | chr5.4:46780900-46780919 | None:intergenic | 40.0% | |
| CAATCTCTTTGGTACCAAGA+AGG | + | chr5.4:46779100-46779119 | None:intergenic | 40.0% | |
| CACATTGAGTATCTTGGTAG+AGG | - | chr5.4:46781053-46781072 | MS.gene94104:CDS | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | - | chr5.4:46777597-46777616 | MS.gene94104:CDS | 40.0% | |
| CGGAGGATGATATATTGTTG+AGG | - | chr5.4:46781228-46781247 | MS.gene94104:CDS | 40.0% | |
| CGTCAATTCCGTAACCTAAA+CGG | - | chr5.4:46775209-46775228 | MS.gene94104:CDS | 40.0% | |
| CTATGCCAATTTCTCCTTTG+TGG | + | chr5.4:46780245-46780264 | None:intergenic | 40.0% | |
| CTGAAGGGATCTATGTTTAC+CGG | + | chr5.4:46775293-46775312 | None:intergenic | 40.0% | |
| CTTCAGAGGGTAATGCAAAA+CGG | + | chr5.4:46780794-46780813 | None:intergenic | 40.0% | |
| GAAATTGTTGCTGGGATTGA+AGG | + | chr5.4:46775246-46775265 | None:intergenic | 40.0% | |
| GACAGTATCTTGATCAATGC+CGG | - | chr5.4:46780516-46780535 | MS.gene94104:intron | 40.0% | |
| GAGCAATTTCTTCGCTTTGT+CGG | + | chr5.4:46780577-46780596 | None:intergenic | 40.0% | |
| GATGATCCAAGCAGAATCAA+GGG | + | chr5.4:46780439-46780458 | None:intergenic | 40.0% | |
| GCAAATTGAATCATAGGTGG+TGG | + | chr5.4:46781422-46781441 | None:intergenic | 40.0% | |
| GGAAAATGCAAATGAAGGGT+GGG | - | chr5.4:46781310-46781329 | MS.gene94104:CDS | 40.0% | |
| GGGATTCAAACACGTTCTAA+GGG | - | chr5.4:46775818-46775837 | MS.gene94104:CDS | 40.0% | |
| GTCATGGATGAAATTGTTGC+TGG | + | chr5.4:46775255-46775274 | None:intergenic | 40.0% | |
| GTGGATAGCTTCGAATTCAT+CGG | + | chr5.4:46780553-46780572 | None:intergenic | 40.0% | |
| TAGAAAAGTGACACGAGTTG+AGG | - | chr5.4:46778956-46778975 | MS.gene94104:intron | 40.0% | |
| TAGGAAAATGTGTTTCCCGA+CGG | + | chr5.4:46780835-46780854 | None:intergenic | 40.0% | |
| TATTAGGAGGGAAATTGCGA+TGG | - | chr5.4:46775910-46775929 | MS.gene94104:CDS | 40.0% | |
| TCACCAAATAACTCCATGCA+TGG | - | chr5.4:46780651-46780670 | MS.gene94104:CDS | 40.0% | |
| TCGCAACTACGTGAAAGTTA+GGG | - | chr5.4:46778008-46778027 | MS.gene94104:intron | 40.0% | |
| TGAAGGAACGTTAGACAACT+GGG | - | chr5.4:46775412-46775431 | MS.gene94104:CDS | 40.0% | |
| TGAAGGGATCTATGTTTACC+GGG | + | chr5.4:46775292-46775311 | None:intergenic | 40.0% | |
| TGAGACATGATTCCACCATT+AGG | + | chr5.4:46780978-46780997 | None:intergenic | 40.0% | |
| TGCCATAGGTGCAAAACTTA+GGG | + | chr5.4:46777821-46777840 | None:intergenic | 40.0% | |
| TGCGTAGTCCATGAGTTTAT+AGG | + | chr5.4:46776652-46776671 | None:intergenic | 40.0% | |
| TGGAAAATGCAAATGAAGGG+TGG | - | chr5.4:46781309-46781328 | MS.gene94104:CDS | 40.0% | |
| TGGGATTCAAACACGTTCTA+AGG | - | chr5.4:46775817-46775836 | MS.gene94104:CDS | 40.0% | |
| TGGTTGAAAACTGACATTGG+TGG | - | chr5.4:46778911-46778930 | MS.gene94104:intron | 40.0% | |
| TGTTACCGTCGATGGAAAAT+TGG | - | chr5.4:46780857-46780876 | MS.gene94104:CDS | 40.0% | |
| TGTTCAGCATCAACATGAGA+AGG | + | chr5.4:46776124-46776143 | None:intergenic | 40.0% | |
| TTTCATCCATGACCTGAAAC+CGG | - | chr5.4:46775262-46775281 | MS.gene94104:CDS | 40.0% | |
| ! | ACCCTCTGAAGACCAATTAT+TGG | - | chr5.4:46780803-46780822 | MS.gene94104:CDS | 40.0% |
| ! | ACGTTGCTTACATTTGAGAC+CGG | - | chr5.4:46779893-46779912 | MS.gene94104:intron | 40.0% |
| ! | CATGACCAATTTTCCATCGA+CGG | + | chr5.4:46780865-46780884 | None:intergenic | 40.0% |
| ! | CCAAAATCTGATGAAAGTGC+AGG | - | chr5.4:46778639-46778658 | MS.gene94104:intron | 40.0% |
| ! | CCCTCTGAAGACCAATTATT+GGG | - | chr5.4:46780804-46780823 | MS.gene94104:CDS | 40.0% |
| ! | CCTGCACTTTCATCAGATTT+TGG | + | chr5.4:46778642-46778661 | None:intergenic | 40.0% |
| ! | CGTTTAGGTTACGGAATTGA+CGG | + | chr5.4:46775211-46775230 | None:intergenic | 40.0% |
| ! | GGGAGTGAAATTTTCCATGA+AGG | + | chr5.4:46777378-46777397 | None:intergenic | 40.0% |
| ! | GGTGGTGTACTTTGTTATAG+GGG | - | chr5.4:46778929-46778948 | MS.gene94104:intron | 40.0% |
| ! | GTGGTGTACTTTGTTATAGG+GGG | - | chr5.4:46778930-46778949 | MS.gene94104:intron | 40.0% |
| ! | GTTTTTGCAATGAGCTTGCA+TGG | + | chr5.4:46780744-46780763 | None:intergenic | 40.0% |
| ! | TGTTGTTTATGCAAACCGGA+CGG | - | chr5.4:46781208-46781227 | MS.gene94104:CDS | 40.0% |
| ! | TTTTGCACCTATGGCAGTTT+TGG | - | chr5.4:46777825-46777844 | MS.gene94104:intron | 40.0% |
| !! | AATCACACCGGTTTATCAAG+TGG | - | chr5.4:46781142-46781161 | MS.gene94104:CDS | 40.0% |
| !! | ACAAGTAGCGTCGATGAAAT+TGG | - | chr5.4:46780900-46780919 | MS.gene94104:CDS | 40.0% |
| !! | AGAGGAAATTTTTCGGTCCA+CGG | - | chr5.4:46781071-46781090 | MS.gene94104:CDS | 40.0% |
| !! | AGTGGTGGTTCTGAATTGAA+TGG | + | chr5.4:46775479-46775498 | None:intergenic | 40.0% |
| !! | ATATTGTTATTGGTGCCACG+TGG | - | chr5.4:46778472-46778491 | MS.gene94104:intron | 40.0% |
| !! | ATTATACCGGGTTTTATCGG+TGG | - | chr5.4:46776013-46776032 | MS.gene94104:CDS | 40.0% |
| !! | CAAGTAGCGTCGATGAAATT+GGG | - | chr5.4:46780901-46780920 | MS.gene94104:CDS | 40.0% |
| !! | CCCAATAATTGGTCTTCAGA+GGG | + | chr5.4:46780807-46780826 | None:intergenic | 40.0% |
| !! | CTTTTGGTCTCTAGAAGTTG+AGG | - | chr5.4:46779067-46779086 | MS.gene94104:intron | 40.0% |
| !! | GATGAACAACTGTTGGTTCA+GGG | - | chr5.4:46780197-46780216 | MS.gene94104:intron | 40.0% |
| !! | GGTTGGTCTTTCAAATGGTT+TGG | - | chr5.4:46778778-46778797 | MS.gene94104:intron | 40.0% |
| !! | GTGGTGGTTCTGAATTGAAT+GGG | + | chr5.4:46775478-46775497 | None:intergenic | 40.0% |
| !! | GTTGCGATTTTGACACCTTA+AGG | + | chr5.4:46777995-46778014 | None:intergenic | 40.0% |
| !! | TCCCAATAATTGGTCTTCAG+AGG | + | chr5.4:46780808-46780827 | None:intergenic | 40.0% |
| !! | TGATGAACAACTGTTGGTTC+AGG | - | chr5.4:46780196-46780215 | MS.gene94104:intron | 40.0% |
| !! | TGGTTGGTTGGTCTTTCAAA+TGG | - | chr5.4:46778773-46778792 | MS.gene94104:intron | 40.0% |
| !!! | CAAAGCGTTGGTTTTAACTG+GGG | - | chr5.4:46775731-46775750 | MS.gene94104:CDS | 40.0% |
| !!! | TGTTTGTTTTTACGGTGCTG+AGG | - | chr5.4:46775850-46775869 | MS.gene94104:CDS | 40.0% |
| AACACGTGACACCTCACTTA+GGG | + | chr5.4:46777891-46777910 | None:intergenic | 45.0% | |
| AAGAGATTGCTGTACGAGCA+TGG | - | chr5.4:46779111-46779130 | MS.gene94104:intron | 45.0% | |
| AATTATTGGGACTACCCGTC+GGG | - | chr5.4:46780817-46780836 | MS.gene94104:CDS | 45.0% | |
| ACACAACCAGGTAACCAATC+AGG | - | chr5.4:46780279-46780298 | MS.gene94104:intron | 45.0% | |
| AGAGATTGCTGTACGAGCAT+GGG | - | chr5.4:46779112-46779131 | MS.gene94104:intron | 45.0% | |
| AGATACTCAATGTGTCCCAC+GGG | + | chr5.4:46781047-46781066 | None:intergenic | 45.0% | |
| AGCGTAGACCGAGTCAAAAT+TGG | + | chr5.4:46777859-46777878 | None:intergenic | 45.0% | |
| AGGAAAATGTGTTTCCCGAC+GGG | + | chr5.4:46780834-46780853 | None:intergenic | 45.0% | |
| AGGGCATGATGAACAACTGT+TGG | - | chr5.4:46780190-46780209 | MS.gene94104:intron | 45.0% | |
| ATCCTTCCACCGATAAAACC+CGG | + | chr5.4:46776022-46776041 | None:intergenic | 45.0% | |
| ATTCTTGGAGATTCGATGCG+TGG | + | chr5.4:46775340-46775359 | None:intergenic | 45.0% | |
| ATTGGCTGGTGAGGATACTT+TGG | - | chr5.4:46781382-46781401 | MS.gene94104:CDS | 45.0% | |
| ATTTCTTCGCTTTGTCGGAG+TGG | + | chr5.4:46780572-46780591 | None:intergenic | 45.0% | |
| CAATGTCGAGCCAATAGTGA+GGG | + | chr5.4:46781012-46781031 | None:intergenic | 45.0% | |
| CAATTATTGGGACTACCCGT+CGG | - | chr5.4:46780816-46780835 | MS.gene94104:CDS | 45.0% | |
| CACTGACACATCTCGATCAA+CGG | - | chr5.4:46776232-46776251 | MS.gene94104:CDS | 45.0% | |
| CAGTTGCAAAACTTAAGGGG+CGG | - | chr5.4:46777954-46777973 | MS.gene94104:intron | 45.0% | |
| CCACGTGGCATGAAATGATT+GGG | - | chr5.4:46778487-46778506 | MS.gene94104:intron | 45.0% | |
| CCAGCACAAACAAGTGTAAC+GGG | + | chr5.4:46775680-46775699 | None:intergenic | 45.0% | |
| CCATAGGTGCAAAACTTAGG+GGG | + | chr5.4:46777819-46777838 | None:intergenic | 45.0% | |
| CCATTAACTGGGCCAATGAT+AGG | + | chr5.4:46780010-46780029 | None:intergenic | 45.0% | |
| CCTATCATTGGCCCAGTTAA+TGG | - | chr5.4:46780007-46780026 | MS.gene94104:CDS | 45.0% | |
| CGATGATCCAAGCAGAATCA+AGG | + | chr5.4:46780440-46780459 | None:intergenic | 45.0% | |
| CTGCCATAGGTGCAAAACTT+AGG | + | chr5.4:46777822-46777841 | None:intergenic | 45.0% | |
| GAAGGGTGGGAATATAGTGT+GGG | - | chr5.4:46781323-46781342 | MS.gene94104:CDS | 45.0% | |
| GAGGGAAGAGTTGGATGAAT+GGG | - | chr5.4:46781247-46781266 | MS.gene94104:CDS | 45.0% | |
| GAGTTCGCCACTTGATAAAC+CGG | + | chr5.4:46781152-46781171 | None:intergenic | 45.0% | |
| GATTCCACCATTAGGAAACC+TGG | + | chr5.4:46780970-46780989 | None:intergenic | 45.0% | |
| GATTGGACCGTTGAAGTAAC+CGG | - | chr5.4:46775587-46775606 | MS.gene94104:CDS | 45.0% | |
| GCAAGAATCACATCACGAGA+AGG | + | chr5.4:46775938-46775957 | None:intergenic | 45.0% | |
| GCACCCTATGTACCTATCAT+TGG | - | chr5.4:46779995-46780014 | MS.gene94104:CDS | 45.0% | |
| GCCATAGGTGCAAAACTTAG+GGG | + | chr5.4:46777820-46777839 | None:intergenic | 45.0% | |
| GCTGAACAAGCCAATGAAGA+AGG | - | chr5.4:46776136-46776155 | MS.gene94104:CDS | 45.0% | |
| GGATGGTGAAATGGCTTAAG+AGG | - | chr5.4:46776038-46776057 | MS.gene94104:CDS | 45.0% | |
| GGCTCGACATTGGAAGTAAA+AGG | - | chr5.4:46781020-46781039 | MS.gene94104:CDS | 45.0% | |
| GGGCCAATGATAGGTACATA+GGG | + | chr5.4:46780001-46780020 | None:intergenic | 45.0% | |
| GGGTGAAAACAAACGTGTGT+AGG | - | chr5.4:46780217-46780236 | MS.gene94104:intron | 45.0% | |
| GTGGGACACATTGAGTATCT+TGG | - | chr5.4:46781047-46781066 | MS.gene94104:CDS | 45.0% | |
| GTTTGTCTTTGTGGGTGAAC+AGG | - | chr5.4:46776544-46776563 | MS.gene94104:intron | 45.0% | |
| TAACACGTGACACCTCACTT+AGG | + | chr5.4:46777892-46777911 | None:intergenic | 45.0% | |
| TAACCAATCAGGTGGTTGGA+TGG | - | chr5.4:46780290-46780309 | MS.gene94104:intron | 45.0% | |
| TCATAGTTGTGTACTCCCTC+CGG | + | chr5.4:46779915-46779934 | None:intergenic | 45.0% | |
| TCCAATACTTGAGGAGCAAG+TGG | + | chr5.4:46779373-46779392 | None:intergenic | 45.0% | |
| TCCACTTGCTCCTCAAGTAT+TGG | - | chr5.4:46779369-46779388 | MS.gene94104:intron | 45.0% | |
| TCCGGTGAGGGTTATTATAC+CGG | - | chr5.4:46776000-46776019 | MS.gene94104:CDS | 45.0% | |
| TCTATGTTTACCGGGAAACC+CGG | + | chr5.4:46775284-46775303 | None:intergenic | 45.0% | |
| TGAAGGGTGGGAATATAGTG+TGG | - | chr5.4:46781322-46781341 | MS.gene94104:CDS | 45.0% | |
| TGAGGGAAGAGTTGGATGAA+TGG | - | chr5.4:46781246-46781265 | MS.gene94104:CDS | 45.0% | |
| TGCTCGTACAGCAATCTCTT+TGG | + | chr5.4:46779111-46779130 | None:intergenic | 45.0% | |
| TGCTTACATGCAGAATGGTG+AGG | - | chr5.4:46775955-46775974 | MS.gene94104:CDS | 45.0% | |
| TGGGCCAATGATAGGTACAT+AGG | + | chr5.4:46780002-46780021 | None:intergenic | 45.0% | |
| TGGTGAGGATACTTTGGCAT+TGG | - | chr5.4:46781388-46781407 | MS.gene94104:CDS | 45.0% | |
| TTCATCCATGACCTGAAACC+GGG | - | chr5.4:46775263-46775282 | MS.gene94104:CDS | 45.0% | |
| TTCATCGGTACAATCAGTGC+CGG | + | chr5.4:46780538-46780557 | None:intergenic | 45.0% | |
| TTCCACCATTAGGAAACCTG+GGG | + | chr5.4:46780968-46780987 | None:intergenic | 45.0% | |
| TTCCATCGACGGTAACACAT+AGG | + | chr5.4:46780854-46780873 | None:intergenic | 45.0% | |
| TTCCTATGTGTTACCGTCGA+TGG | - | chr5.4:46780849-46780868 | MS.gene94104:CDS | 45.0% | |
| TTTGAACACCCAACACAACC+AGG | - | chr5.4:46780267-46780286 | MS.gene94104:intron | 45.0% | |
| ! | AAAACTAACGGAGTGTCACG+TGG | + | chr5.4:46778513-46778532 | None:intergenic | 45.0% |
| ! | AAACTCATGGACTACGCAGA+GGG | - | chr5.4:46776654-46776673 | MS.gene94104:intron | 45.0% |
| ! | AAAGTATCCTCACCAGCCAA+TGG | + | chr5.4:46781383-46781402 | None:intergenic | 45.0% |
| ! | AATCCTCCCAACGAGCTTTT+GGG | + | chr5.4:46775571-46775590 | None:intergenic | 45.0% |
| ! | AGTGGCGAACTCGATTTTGA+AGG | - | chr5.4:46781160-46781179 | MS.gene94104:CDS | 45.0% |
| ! | CGAGTTGAGGTAACAATGGA+CGG | - | chr5.4:46778969-46778988 | MS.gene94104:intron | 45.0% |
| ! | GACACGAGTTGAGGTAACAA+TGG | - | chr5.4:46778965-46778984 | MS.gene94104:intron | 45.0% |
| ! | GATTGGTTACCTGGTTGTGT+TGG | + | chr5.4:46780279-46780298 | None:intergenic | 45.0% |
| ! | GTGTACTTTGTTATAGGGGG+TGG | - | chr5.4:46778933-46778952 | MS.gene94104:intron | 45.0% |
| ! | GTTGAGGTGTTAGACCTTCT+TGG | - | chr5.4:46779083-46779102 | MS.gene94104:intron | 45.0% |
| ! | TAAACTCATGGACTACGCAG+AGG | - | chr5.4:46776653-46776672 | MS.gene94104:intron | 45.0% |
| ! | TGCATGGGATTTTCTCACGT+GGG | + | chr5.4:46780728-46780747 | None:intergenic | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | - | chr5.4:46779897-46779916 | MS.gene94104:intron | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | chr5.4:46779916-46779897 | None:intergenic | 45.0% |
| ! | TTGCATGGGATTTTCTCACG+TGG | + | chr5.4:46780729-46780748 | None:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | - | chr5.4:46779896-46779915 | MS.gene94104:intron | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | chr5.4:46779915-46779896 | None:intergenic | 45.0% |
| !! | AATCGGTGAACTTGTTGCCA+CGG | - | chr5.4:46780608-46780627 | MS.gene94104:CDS | 45.0% |
| !! | ACCGAGTCAAAATTGGCCTT+GGG | + | chr5.4:46777852-46777871 | None:intergenic | 45.0% |
| !! | ATTTGGTGACGATGAATCCG+AGG | + | chr5.4:46780640-46780659 | None:intergenic | 45.0% |
| !! | CAAGTGTAACGGGTAATTCC+CGG | + | chr5.4:46775670-46775689 | None:intergenic | 45.0% |
| !! | CATCACGGAGAGTATCATGA+GGG | - | chr5.4:46781349-46781368 | MS.gene94104:CDS | 45.0% |
| !! | GATACTTTGGCATTGGCTTG+TGG | - | chr5.4:46781395-46781414 | MS.gene94104:CDS | 45.0% |
| !! | TCAAACACGTTCTAAGGGTG+CGG | - | chr5.4:46775823-46775842 | MS.gene94104:CDS | 45.0% |
| !! | TCATCACGGAGAGTATCATG+AGG | - | chr5.4:46781348-46781367 | MS.gene94104:CDS | 45.0% |
| AACATGGCACGTGTGCACAT+TGG | - | chr5.4:46778998-46779017 | MS.gene94104:intron | 50.0% | |
| AAGATACTGTCTGAGCCACC+GGG | + | chr5.4:46780507-46780526 | None:intergenic | 50.0% | |
| ACCACGTGCTTAAACGGTGT+GGG | - | chr5.4:46775798-46775817 | MS.gene94104:CDS | 50.0% | |
| ACTTCAAAAACGTGCACCCC+AGG | - | chr5.4:46780949-46780968 | MS.gene94104:CDS | 50.0% | |
| AGATCATGGGTTTCCGGTGA+GGG | - | chr5.4:46775988-46776007 | MS.gene94104:CDS | 50.0% | |
| AGGATTTACCTGCTGGTGGT+GGG | - | chr5.4:46775870-46775889 | MS.gene94104:CDS | 50.0% | |
| AGGCCCCACAAAGGAGAAAT+TGG | - | chr5.4:46780237-46780256 | MS.gene94104:intron | 50.0% | |
| ATCCACTACGTCCGTAACCA+CGG | - | chr5.4:46775539-46775558 | MS.gene94104:CDS | 50.0% | |
| ATGGGTGTTTCCCTGTGAGA+CGG | + | chr5.4:46775460-46775479 | None:intergenic | 50.0% | |
| ATTGGAAGTAAAAGGCCCCG+TGG | - | chr5.4:46781028-46781047 | MS.gene94104:CDS | 50.0% | |
| CAAAAGCTCGTTGGGAGGAT+TGG | - | chr5.4:46775570-46775589 | MS.gene94104:CDS | 50.0% | |
| CAACCAGGTAACCAATCAGG+TGG | - | chr5.4:46780282-46780301 | MS.gene94104:intron | 50.0% | |
| CAAGATACTGTCTGAGCCAC+CGG | + | chr5.4:46780508-46780527 | None:intergenic | 50.0% | |
| CAATGGACGGTGGAGAAACA+TGG | - | chr5.4:46778982-46779001 | MS.gene94104:intron | 50.0% | |
| CAGGTAACCAATCAGGTGGT+TGG | - | chr5.4:46780286-46780305 | MS.gene94104:intron | 50.0% | |
| CATGCAGAATGGTGAGGCTT+TGG | - | chr5.4:46775961-46775980 | MS.gene94104:CDS | 50.0% | |
| CCAATGTCGAGCCAATAGTG+AGG | + | chr5.4:46781013-46781032 | None:intergenic | 50.0% | |
| CCCAATCATTTCATGCCACG+TGG | + | chr5.4:46778490-46778509 | None:intergenic | 50.0% | |
| CCCGGTATAATAACCCTCAC+CGG | + | chr5.4:46776004-46776023 | None:intergenic | 50.0% | |
| CCCGTTACACTTGTTTGTGC+TGG | - | chr5.4:46775677-46775696 | MS.gene94104:CDS | 50.0% | |
| CCGGTGAGGGTTATTATACC+GGG | - | chr5.4:46776001-46776020 | MS.gene94104:CDS | 50.0% | |
| CGACGGGTAGTCCCAATAAT+TGG | + | chr5.4:46780818-46780837 | None:intergenic | 50.0% | |
| CGACGGTTCAACTTCCAAGT+TGG | + | chr5.4:46775375-46775394 | None:intergenic | 50.0% | |
| CGCTTCCTTAAAGACCATCC+CGG | - | chr5.4:46780486-46780505 | MS.gene94104:intron | 50.0% | |
| CTAACGTTCCTTCATCGCGT+GGG | + | chr5.4:46775406-46775425 | None:intergenic | 50.0% | |
| GAACTGGAGTGATGAAACCG+TGG | + | chr5.4:46775517-46775536 | None:intergenic | 50.0% | |
| GATACTCAATGTGTCCCACG+GGG | + | chr5.4:46781046-46781065 | None:intergenic | 50.0% | |
| GCCACGTGGCATGAAATGAT+TGG | - | chr5.4:46778486-46778505 | MS.gene94104:intron | 50.0% | |
| GGCAAGATCTCATCGTGACA+TGG | + | chr5.4:46776631-46776650 | None:intergenic | 50.0% | |
| GGCTGCTGATAGCAAAGTGA+AGG | + | chr5.4:46779432-46779451 | None:intergenic | 50.0% | |
| GTCTTTGTGGGTGAACAGGT+TGG | - | chr5.4:46776548-46776567 | MS.gene94104:intron | 50.0% | |
| GTGACATGGCGTCGTAATCA+CGG | + | chr5.4:46776617-46776636 | None:intergenic | 50.0% | |
| GTTGAGGTAACAATGGACGG+TGG | - | chr5.4:46778972-46778991 | MS.gene94104:intron | 50.0% | |
| TCGGTGGAAGGATGGTGAAA+TGG | - | chr5.4:46776029-46776048 | MS.gene94104:CDS | 50.0% | |
| TCGTTCGTGAGTTTCCAAGC+CGG | - | chr5.4:46775648-46775667 | MS.gene94104:CDS | 50.0% | |
| TCTAACGTTCCTTCATCGCG+TGG | + | chr5.4:46775407-46775426 | None:intergenic | 50.0% | |
| TCTGCTTGGATCATCGTCCA+CGG | - | chr5.4:46780444-46780463 | MS.gene94104:intron | 50.0% | |
| TGCAGTCGTAGACATTACCG+TGG | + | chr5.4:46780464-46780483 | None:intergenic | 50.0% | |
| TGCTGTCCCAAAAGCTCGTT+GGG | - | chr5.4:46775562-46775581 | MS.gene94104:CDS | 50.0% | |
| TGTTTATGCAAACCGGACGG+AGG | - | chr5.4:46781211-46781230 | MS.gene94104:CDS | 50.0% | |
| TTCCTTAAAGACCATCCCGG+TGG | - | chr5.4:46780489-46780508 | MS.gene94104:intron | 50.0% | |
| TTGCCATCCAACCACCTGAT+TGG | + | chr5.4:46780296-46780315 | None:intergenic | 50.0% | |
| TTGGAAACTCACGAACGAGC+CGG | + | chr5.4:46775646-46775665 | None:intergenic | 50.0% | |
| TTGGAAGTAAAAGGCCCCGT+GGG | - | chr5.4:46781029-46781048 | MS.gene94104:CDS | 50.0% | |
| ! | AGGCTTTGGCTCCAGATCAT+GGG | - | chr5.4:46775975-46775994 | MS.gene94104:CDS | 50.0% |
| ! | CAACCACCTGATTGGTTACC+TGG | + | chr5.4:46780288-46780307 | None:intergenic | 50.0% |
| ! | CAATCCTCCCAACGAGCTTT+TGG | + | chr5.4:46775572-46775591 | None:intergenic | 50.0% |
| ! | CATGAGGGAGCATGTTCCAT+TGG | - | chr5.4:46781364-46781383 | MS.gene94104:CDS | 50.0% |
| ! | CCCCCTAAGTTTTGCACCTA+TGG | - | chr5.4:46777816-46777835 | MS.gene94104:intron | 50.0% |
| ! | CGGGATGGTCTTTAAGGAAG+CGG | + | chr5.4:46780488-46780507 | None:intergenic | 50.0% |
| ! | GAACGACGCCGTTTAGGTTA+CGG | + | chr5.4:46775220-46775239 | None:intergenic | 50.0% |
| ! | GACCGAGTCAAAATTGGCCT+TGG | + | chr5.4:46777853-46777872 | None:intergenic | 50.0% |
| ! | GGGATGGTCTTTAAGGAAGC+GGG | + | chr5.4:46780487-46780506 | None:intergenic | 50.0% |
| ! | TTTGTGGGTGAACAGGTTGG+TGG | - | chr5.4:46776551-46776570 | MS.gene94104:intron | 50.0% |
| !! | ATCGGTGAACTTGTTGCCAC+GGG | - | chr5.4:46780609-46780628 | MS.gene94104:CDS | 50.0% |
| !! | CCGAGTCAAAATTGGCCTTG+GGG | + | chr5.4:46777851-46777870 | None:intergenic | 50.0% |
| !! | CCTCACTATTGGCTCGACAT+TGG | - | chr5.4:46781010-46781029 | MS.gene94104:CDS | 50.0% |
| !! | GGGTTTTATCGGTGGAAGGA+TGG | - | chr5.4:46776021-46776040 | MS.gene94104:CDS | 50.0% |
| !! | TACCGGGTTTTATCGGTGGA+AGG | - | chr5.4:46776017-46776036 | MS.gene94104:CDS | 50.0% |
| !! | TGGTTACGGACGTAGTGGAT+TGG | + | chr5.4:46775539-46775558 | None:intergenic | 50.0% |
| !!! | ACATTTTTAGCCGGTGGGAC+TGG | - | chr5.4:46781119-46781138 | MS.gene94104:CDS | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+CGG | - | chr5.4:46777848-46777867 | MS.gene94104:intron | 50.0% |
| AAACCCAACCCGGTTCACCA+TGG | - | chr5.4:46775619-46775638 | MS.gene94104:CDS | 55.0% | |
| AAACCGTGGTGCATGAGACG+TGG | + | chr5.4:46775503-46775522 | None:intergenic | 55.0% | |
| AACCGTGGTGCATGAGACGT+GGG | + | chr5.4:46775502-46775521 | None:intergenic | 55.0% | |
| AACGTGTGTAGGCCCCACAA+AGG | - | chr5.4:46780228-46780247 | MS.gene94104:intron | 55.0% | |
| AGCCACCGGGATGGTCTTTA+AGG | + | chr5.4:46780494-46780513 | None:intergenic | 55.0% | |
| AGGTGTGAACGACGCCGTTT+AGG | + | chr5.4:46775226-46775245 | None:intergenic | 55.0% | |
| ATCTTCGTCGTCGCTGCTGA+AGG | + | chr5.4:46775309-46775328 | None:intergenic | 55.0% | |
| ATTCTCGACCCACGCGATGA+AGG | - | chr5.4:46775395-46775414 | MS.gene94104:CDS | 55.0% | |
| CACCACGTGCTTAAACGGTG+TGG | - | chr5.4:46775797-46775816 | MS.gene94104:CDS | 55.0% | |
| CACCCCAGGTTTCCTAATGG+TGG | - | chr5.4:46780963-46780982 | MS.gene94104:CDS | 55.0% | |
| CACGGAGTTCGAAACAGCAG+CGG | + | chr5.4:46775759-46775778 | None:intergenic | 55.0% | |
| CAGATCATGGGTTTCCGGTG+AGG | - | chr5.4:46775987-46776006 | MS.gene94104:CDS | 55.0% | |
| CGCTGCACCACGTGCTTAAA+CGG | - | chr5.4:46775792-46775811 | MS.gene94104:CDS | 55.0% | |
| CGTTCGTGAGTTTCCAAGCC+GGG | - | chr5.4:46775649-46775668 | MS.gene94104:CDS | 55.0% | |
| CTCACCGGAAACCCATGATC+TGG | + | chr5.4:46775989-46776008 | None:intergenic | 55.0% | |
| CTGACGTGACACCCTAAGTG+AGG | - | chr5.4:46777877-46777896 | MS.gene94104:intron | 55.0% | |
| CTTCCATGGTCCGTCTCACA+GGG | - | chr5.4:46775447-46775466 | MS.gene94104:CDS | 55.0% | |
| CTTGGGGCCAAAACTGCCAT+AGG | + | chr5.4:46777835-46777854 | None:intergenic | 55.0% | |
| GAGGATTTACCTGCTGGTGG+TGG | - | chr5.4:46775869-46775888 | MS.gene94104:CDS | 55.0% | |
| GCTGAGGATTTACCTGCTGG+TGG | - | chr5.4:46775866-46775885 | MS.gene94104:CDS | 55.0% | |
| GGCTCCAGATCATGGGTTTC+CGG | - | chr5.4:46775982-46776001 | MS.gene94104:CDS | 55.0% | |
| GGTCACACGAAACGCTTCCA+TGG | - | chr5.4:46775433-46775452 | MS.gene94104:CDS | 55.0% | |
| GTGCACCCCAGGTTTCCTAA+TGG | - | chr5.4:46780960-46780979 | MS.gene94104:CDS | 55.0% | |
| GTGCTGTCCCAAAAGCTCGT+TGG | - | chr5.4:46775561-46775580 | MS.gene94104:CDS | 55.0% | |
| TATTTCGACCCACCACCAGC+AGG | + | chr5.4:46775881-46775900 | None:intergenic | 55.0% | |
| TCCCACACCGTTTAAGCACG+TGG | + | chr5.4:46775802-46775821 | None:intergenic | 55.0% | |
| TCTTCGTCGTCGCTGCTGAA+GGG | + | chr5.4:46775308-46775327 | None:intergenic | 55.0% | |
| TGACCTGAAACCGGGTTTCC+CGG | - | chr5.4:46775271-46775290 | MS.gene94104:CDS | 55.0% | |
| TGCTGTACGAGCATGGGATG+AGG | - | chr5.4:46779118-46779137 | MS.gene94104:intron | 55.0% | |
| TGTCCCAAAAGCTCGTTGGG+AGG | - | chr5.4:46775565-46775584 | MS.gene94104:CDS | 55.0% | |
| TTACCGGGAAACCCGGTTTC+AGG | + | chr5.4:46775277-46775296 | None:intergenic | 55.0% | |
| TTGGGACAGCACCGTGGTTA+CGG | + | chr5.4:46775553-46775572 | None:intergenic | 55.0% | |
| TTTCCCTGTGAGACGGACCA+TGG | + | chr5.4:46775453-46775472 | None:intergenic | 55.0% | |
| ! | AGGGAGCATGTTCCATTGGC+TGG | - | chr5.4:46781368-46781387 | MS.gene94104:CDS | 55.0% |
| ! | CAGAGGGCGTATACGCTGAA+AGG | - | chr5.4:46776670-46776689 | MS.gene94104:intron | 55.0% |
| ! | GAGGCTTTGGCTCCAGATCA+TGG | - | chr5.4:46775974-46775993 | MS.gene94104:CDS | 55.0% |
| ! | GCATGTTCCATTGGCTGGTG+AGG | - | chr5.4:46781373-46781392 | MS.gene94104:CDS | 55.0% |
| ! | GGAAACCCGGTTTCAGGTCA+TGG | + | chr5.4:46775271-46775290 | None:intergenic | 55.0% |
| ! | GGTGCTGAGGATTTACCTGC+TGG | - | chr5.4:46775863-46775882 | MS.gene94104:CDS | 55.0% |
| !! | CGGACGTAGTGGATTGGAAC+TGG | + | chr5.4:46775533-46775552 | None:intergenic | 55.0% |
| !! | CTATGGCAGTTTTGGCCCCA+AGG | - | chr5.4:46777833-46777852 | MS.gene94104:intron | 55.0% |
| !! | CTGCTGTTTCGAACTCCGTG+TGG | - | chr5.4:46775759-46775778 | MS.gene94104:CDS | 55.0% |
| !! | GCTGGTGGTGGGTCGAAATA+TGG | - | chr5.4:46775881-46775900 | MS.gene94104:CDS | 55.0% |
| !! | GTAACGGGTAATTCCCGGCT+TGG | + | chr5.4:46775665-46775684 | None:intergenic | 55.0% |
| CAACCCGGTTCACCATGGAC+CGG | - | chr5.4:46775624-46775643 | MS.gene94104:CDS | 60.0% | |
| CACCGTGGTTACGGACGTAG+TGG | + | chr5.4:46775544-46775563 | None:intergenic | 60.0% | |
| CGGTGGGACTGGAATCACAC+CGG | - | chr5.4:46781130-46781149 | MS.gene94104:CDS | 60.0% | |
| CGGTGTGATTCCAGTCCCAC+CGG | + | chr5.4:46781132-46781151 | None:intergenic | 60.0% | |
| CTCCCACGTCTCATGCACCA+CGG | - | chr5.4:46775497-46775516 | MS.gene94104:CDS | 60.0% | |
| GCTTCCATGGTCCGTCTCAC+AGG | - | chr5.4:46775446-46775465 | MS.gene94104:CDS | 60.0% | |
| GGTCCATGGTGAACCGGGTT+GGG | + | chr5.4:46775625-46775644 | None:intergenic | 60.0% | |
| GTTTCGAACTCCGTGTGGCG+CGG | - | chr5.4:46775764-46775783 | MS.gene94104:CDS | 60.0% | |
| TACTGTCTGAGCCACCGGGA+TGG | + | chr5.4:46780503-46780522 | None:intergenic | 60.0% | |
| TCGCGTGGGTCGAGAATCGA+CGG | + | chr5.4:46775392-46775411 | None:intergenic | 60.0% | |
| TGAATCCGAGGTGTAGCCCG+TGG | + | chr5.4:46780628-46780647 | None:intergenic | 60.0% | |
| TGCATGAGACGTGGGAGTGG+TGG | + | chr5.4:46775494-46775513 | None:intergenic | 60.0% | |
| TGGTGCATGAGACGTGGGAG+TGG | + | chr5.4:46775497-46775516 | None:intergenic | 60.0% | |
| ! | TGTTGCCACGGGCTACACCT+CGG | - | chr5.4:46780620-46780639 | MS.gene94104:CDS | 60.0% |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | + | chr5.4:46777935-46777954 | None:intergenic | 60.0% |
| !!! | GAGCTTTTGGGACAGCACCG+TGG | + | chr5.4:46775559-46775578 | None:intergenic | 60.0% |
| CGAGCCGGTCCATGGTGAAC+CGG | + | chr5.4:46775631-46775650 | None:intergenic | 65.0% | |
| CGGTCCATGGTGAACCGGGT+TGG | + | chr5.4:46775626-46775645 | None:intergenic | 65.0% | |
| CTCACGAACGAGCCGGTCCA+TGG | + | chr5.4:46775639-46775658 | None:intergenic | 65.0% | |
| GAGCCGGTCCATGGTGAACC+GGG | + | chr5.4:46775630-46775649 | None:intergenic | 65.0% | |
| CAGCGAAACGCCGCGCCACA+CGG | + | chr5.4:46775777-46775796 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 46775188 | 46781502 | 46775188 | ID=MS.gene94104 |
| chr5.4 | mRNA | 46775188 | 46781502 | 46775188 | ID=MS.gene94104.t1;Parent=MS.gene94104 |
| chr5.4 | exon | 46780533 | 46781502 | 46780533 | ID=MS.gene94104.t1.exon1;Parent=MS.gene94104.t1 |
| chr5.4 | CDS | 46780533 | 46781502 | 46780533 | ID=cds.MS.gene94104.t1;Parent=MS.gene94104.t1 |
| chr5.4 | exon | 46779984 | 46780124 | 46779984 | ID=MS.gene94104.t1.exon2;Parent=MS.gene94104.t1 |
| chr5.4 | CDS | 46779984 | 46780124 | 46779984 | ID=cds.MS.gene94104.t1;Parent=MS.gene94104.t1 |
| chr5.4 | exon | 46777509 | 46777741 | 46777509 | ID=MS.gene94104.t1.exon3;Parent=MS.gene94104.t1 |
| chr5.4 | CDS | 46777509 | 46777741 | 46777509 | ID=cds.MS.gene94104.t1;Parent=MS.gene94104.t1 |
| chr5.4 | exon | 46775188 | 46776498 | 46775188 | ID=MS.gene94104.t1.exon4;Parent=MS.gene94104.t1 |
| chr5.4 | CDS | 46775188 | 46776498 | 46775188 | ID=cds.MS.gene94104.t1;Parent=MS.gene94104.t1 |
| Gene Sequence |
| Protein sequence |
