AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94887

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94887.t1 MTR_4g130820 52.556 763 225 17 1 662 1 727 0.0 709
MS.gene94887.t1 MTR_3g091080 42.063 756 282 15 14 662 4 710 0.0 535
MS.gene94887.t1 MTR_1g028370 41.667 756 295 17 14 667 5 716 1.29e-178 525
MS.gene94887.t1 MTR_2g460590 42.489 699 258 9 82 667 24 691 1.91e-178 524
MS.gene94887.t1 MTR_4g058730 45.118 594 212 9 89 589 45 617 2.37e-169 498
MS.gene94887.t1 MTR_3g109030 42.753 683 260 10 89 662 61 721 5.44e-168 498
MS.gene94887.t1 MTR_1g064240 42.438 681 259 15 89 665 59 710 1.56e-163 486
MS.gene94887.t1 MTR_2g094860 38.670 737 312 17 20 661 10 701 7.95e-157 469
MS.gene94887.t1 MTR_7g117310 39.410 746 315 14 17 662 19 727 4.05e-154 463
MS.gene94887.t1 MTR_7g117310 39.410 746 315 14 17 662 7 715 5.41e-154 462
MS.gene94887.t1 MTR_3g088875 39.168 697 280 15 90 666 20 692 5.89e-154 461
MS.gene94887.t1 MTR_7g117310 41.580 671 263 12 92 662 20 661 3.81e-153 458
MS.gene94887.t1 MTR_8g027755 41.291 666 262 14 96 660 80 717 4.47e-151 455
MS.gene94887.t1 MTR_7g034605 39.910 664 269 13 100 661 43 678 1.01e-147 445
MS.gene94887.t1 MTR_6g477760 33.890 599 257 14 101 589 123 692 8.11e-87 286
MS.gene94887.t1 MTR_6g075440 30.478 607 289 12 101 604 169 745 1.72e-79 268
MS.gene94887.t1 MTR_6g075440 30.274 621 297 12 101 612 169 762 2.04e-79 268
MS.gene94887.t1 MTR_5g007630 32.609 598 274 14 101 601 172 737 6.43e-79 266
MS.gene94887.t1 MTR_6g075290 32.890 602 268 12 100 595 192 763 4.40e-77 262
MS.gene94887.t1 MTR_8g464570 29.813 587 287 10 103 587 64 627 1.42e-74 253
MS.gene94887.t1 MTR_7g012260 30.213 609 293 11 83 589 99 677 8.07e-67 233
MS.gene94887.t1 MTR_6g075290 32.348 609 264 16 93 595 156 722 8.13e-66 230
MS.gene94887.t1 MTR_6g075290 32.474 582 255 13 120 595 12 561 2.21e-65 226
MS.gene94887.t1 MTR_2g081110 27.288 590 301 9 99 587 61 623 1.30e-60 215
MS.gene94887.t1 MTR_6g075410 29.750 521 277 13 100 560 97 588 1.69e-59 212
MS.gene94887.t1 MTR_6g075390 30.994 513 259 11 100 549 114 594 2.28e-59 211
MS.gene94887.t1 MTR_6g076060 30.155 388 190 6 228 560 29 390 1.15e-37 147
MS.gene94887.t1 MTR_6g075320 39.496 119 68 1 100 214 148 266 7.51e-21 94.0
MS.gene94887.t1 MTR_2g094810 43.119 109 58 1 180 284 12 120 8.70e-21 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94887.t1 AT1G15990 54.486 769 205 18 6 662 2 737 0.0 737
MS.gene94887.t1 AT5G57940 50.000 752 240 14 11 662 1 716 0.0 658
MS.gene94887.t1 AT5G57940 50.000 752 240 14 11 662 1 716 0.0 658
MS.gene94887.t1 AT5G57940 49.401 751 239 12 11 662 1 709 0.0 646
MS.gene94887.t1 AT2G28260 42.794 680 255 9 74 662 1 637 1.08e-176 518
MS.gene94887.t1 AT2G28260 42.143 700 270 10 55 662 21 677 1.08e-176 519
MS.gene94887.t1 AT5G53130 44.127 664 244 10 97 662 80 714 3.63e-175 516
MS.gene94887.t1 AT1G01340 43.219 671 257 11 92 662 59 705 7.62e-175 515
MS.gene94887.t1 AT1G01340 43.219 671 257 11 92 662 54 700 8.36e-175 515
MS.gene94887.t1 AT2G24610 42.671 689 254 12 89 661 60 723 4.84e-173 511
MS.gene94887.t1 AT2G24610 42.609 690 255 12 89 662 75 739 1.65e-172 510
MS.gene94887.t1 AT4G01010 41.595 702 269 13 61 664 37 695 1.12e-167 496
MS.gene94887.t1 AT4G01010 41.595 702 269 13 61 664 37 695 1.12e-167 496
MS.gene94887.t1 AT5G14870 40.173 692 258 12 98 661 37 700 4.65e-158 472
MS.gene94887.t1 AT4G30360 41.691 674 265 13 99 666 69 720 5.47e-158 473
MS.gene94887.t1 AT3G48010 38.484 699 259 15 98 660 41 704 8.21e-148 446
MS.gene94887.t1 AT1G19780 62.060 398 86 8 314 667 164 540 1.02e-147 440
MS.gene94887.t1 AT1G19780 58.929 112 42 2 213 321 2 112 5.63e-35 140
MS.gene94887.t1 AT1G19780 62.060 398 86 8 314 667 375 751 1.43e-145 441
MS.gene94887.t1 AT1G19780 59.568 324 121 5 6 321 2 323 2.28e-124 387
MS.gene94887.t1 AT2G46430 38.513 753 301 20 14 660 5 701 2.04e-141 429
MS.gene94887.t1 AT2G46430 38.513 753 301 20 14 660 5 701 2.04e-141 429
MS.gene94887.t1 AT4G30560 61.022 372 66 6 330 662 372 703 6.81e-140 426
MS.gene94887.t1 AT4G30560 52.273 308 135 5 24 323 1 304 6.84e-99 318
MS.gene94887.t1 AT4G30560 61.022 372 66 6 330 662 372 703 6.81e-140 426
MS.gene94887.t1 AT4G30560 52.273 308 135 5 24 323 1 304 6.84e-99 318
MS.gene94887.t1 AT4G30560 61.022 372 66 6 330 662 372 703 6.81e-140 426
MS.gene94887.t1 AT4G30560 52.273 308 135 5 24 323 1 304 6.84e-99 318
MS.gene94887.t1 AT4G30560 61.022 372 66 6 330 662 398 729 7.92e-140 426
MS.gene94887.t1 AT4G30560 52.695 334 143 6 1 323 1 330 1.65e-107 342
MS.gene94887.t1 AT4G30560 61.022 372 66 6 330 662 398 729 7.92e-140 426
MS.gene94887.t1 AT4G30560 52.695 334 143 6 1 323 1 330 1.65e-107 342
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 372 717 2.24e-135 414
MS.gene94887.t1 AT2G23980 52.885 312 136 4 24 331 1 305 1.10e-103 332
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 399 744 4.65e-135 414
MS.gene94887.t1 AT2G23980 53.392 339 143 5 1 331 1 332 7.55e-114 359
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 399 744 4.65e-135 414
MS.gene94887.t1 AT2G23980 53.392 339 143 5 1 331 1 332 7.55e-114 359
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 399 744 4.65e-135 414
MS.gene94887.t1 AT2G23980 53.392 339 143 5 1 331 1 332 7.55e-114 359
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 399 744 4.65e-135 414
MS.gene94887.t1 AT2G23980 53.392 339 143 5 1 331 1 332 7.55e-114 359
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 399 744 4.65e-135 414
MS.gene94887.t1 AT2G23980 53.392 339 143 5 1 331 1 332 7.55e-114 359
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 422 767 7.35e-135 414
MS.gene94887.t1 AT2G23980 50.000 362 143 6 1 331 1 355 1.93e-108 345
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 422 767 7.35e-135 414
MS.gene94887.t1 AT2G23980 50.000 362 143 6 1 331 1 355 1.93e-108 345
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 422 767 7.35e-135 414
MS.gene94887.t1 AT2G23980 50.000 362 143 6 1 331 1 355 1.93e-108 345
MS.gene94887.t1 AT2G23980 59.249 373 85 7 330 662 422 767 7.35e-135 414
MS.gene94887.t1 AT2G23980 50.000 362 143 6 1 331 1 355 1.93e-108 345
MS.gene94887.t1 AT2G46440 34.073 631 279 16 99 629 28 621 2.28e-97 312
MS.gene94887.t1 AT2G46450 31.222 663 302 20 99 658 28 639 3.02e-86 284
MS.gene94887.t1 AT2G46450 31.222 663 302 20 99 658 28 639 3.02e-86 284
MS.gene94887.t1 AT3G17690 32.670 603 274 15 90 590 147 719 3.32e-83 278
MS.gene94887.t1 AT3G17690 34.109 516 248 12 90 543 147 632 2.75e-81 270
MS.gene94887.t1 AT2G46450 30.166 663 286 21 99 658 28 616 4.91e-78 261
MS.gene94887.t1 AT2G46450 30.060 662 288 20 99 658 15 603 7.83e-78 260
MS.gene94887.t1 AT3G17700 33.992 506 247 8 101 547 192 669 2.69e-76 258
MS.gene94887.t1 AT3G17700 33.981 515 251 9 101 556 192 676 5.54e-76 259
MS.gene94887.t1 AT2G46440 42.643 333 127 6 330 629 142 443 5.01e-72 240
MS.gene94887.t1 AT5G15410 29.461 594 291 9 94 581 105 676 1.17e-67 235
MS.gene94887.t1 AT5G15410 29.461 594 291 9 94 581 106 677 1.66e-67 235
MS.gene94887.t1 AT5G54250 27.825 593 301 12 100 587 78 648 5.72e-63 222
MS.gene94887.t1 AT5G54250 27.825 593 301 12 100 587 78 648 5.72e-63 222
MS.gene94887.t1 AT5G54250 27.825 593 301 12 100 587 78 648 5.72e-63 222
MS.gene94887.t1 AT5G54250 27.150 593 300 14 100 587 78 643 3.52e-57 206
MS.gene94887.t1 AT3G17690 32.172 373 188 9 90 400 147 516 2.12e-48 178

Find 136 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATAGTAATAGCTATTA+TGG 0.126403 4.1:+70360039 MS.gene94887:CDS
GCACCTTCATCTCGAGTATT+TGG 0.204342 4.1:+70358529 MS.gene94887:CDS
GTTTCGAGTCGGAGTGAAAA+AGG 0.226640 4.1:+70358183 MS.gene94887:CDS
TTCTGCAAGGGTGTTGGTTC+CGG 0.238603 4.1:+70361038 MS.gene94887:CDS
TGTGACACTTTAAGATCTTC+TGG 0.248692 4.1:-70358268 None:intergenic
ATATCTCTTCTAAGATCTTT+TGG 0.250851 4.1:-70360371 None:intergenic
TACGATTTGTGGTTGAAATA+AGG 0.252669 4.1:-70358397 None:intergenic
TTCTTCACAATGTTTGATTC+TGG 0.258628 4.1:+70357628 None:intergenic
ATACAACAGTCTATGCTTCT+TGG 0.265211 4.1:+70361091 MS.gene94887:CDS
GTGTATGACATATATTATTC+AGG 0.275039 4.1:+70360523 MS.gene94887:CDS
ACTTGCTAGCTTGTTATCTA+TGG 0.279932 4.1:-70358428 None:intergenic
ATGATGTAGGTTGGATGATT+TGG 0.281948 4.1:+70358048 MS.gene94887:intron
AGGGGTCGATGAAGAAAATT+TGG 0.285665 4.1:+70360337 MS.gene94887:CDS
GCTATTTCATTATTGACTTC+TGG 0.288210 4.1:+70358593 MS.gene94887:CDS
CCCCATAATAGCTATTACTA+TGG 0.288425 4.1:-70360041 None:intergenic
CAGAGCGAACTTACATAGTT+AGG 0.292780 4.1:+70360618 MS.gene94887:CDS
GGTAAGCTTGCTGCAGATTT+CGG 0.312874 4.1:-70360791 None:intergenic
GTGCTCTTTGCTCTTCTGAT+TGG 0.318517 4.1:+70360067 MS.gene94887:CDS
CAATGAAGGCGGTGCGGAAT+TGG 0.323385 4.1:-70358507 None:intergenic
CTGCATGGAGGAAGCATTTA+CGG 0.328066 4.1:+70360956 MS.gene94887:CDS
TCTGCAAGGGTGTTGGTTCC+GGG 0.329044 4.1:+70361039 MS.gene94887:CDS
TCCATAGTAATAGCTATTAT+GGG 0.333113 4.1:+70360040 MS.gene94887:CDS
AATCAGGTTCTGAGGGCTTT+GGG 0.347993 4.1:-70361176 None:intergenic
AAATCAGGTTCTGAGGGCTT+TGG 0.350213 4.1:-70361177 None:intergenic
TCAGATGGACTAATGAATAT+TGG 0.360085 4.1:+70358208 MS.gene94887:CDS
TCAATCAATGTCGGTTCGTC+TGG 0.370374 4.1:+70360199 MS.gene94887:CDS
GCTAGGTGGCATTGACGAAT+TGG 0.377299 4.1:-70358074 None:intergenic
AATGGTACGGTTCATACCTT+TGG 0.384471 4.1:+70358829 MS.gene94887:CDS
TGCAAGACGCATGGAGGTAT+TGG 0.384528 4.1:+70358757 MS.gene94887:CDS
TTTGTTTGAATTTAGTCAAA+AGG 0.387331 4.1:+70360406 MS.gene94887:CDS
ATGAACAACATCTCATCAAC+TGG 0.395916 4.1:-70360650 None:intergenic
TCATTGAGAGCACTGAAATC+AGG 0.396573 4.1:-70361192 None:intergenic
CCTCAAAGTTCGTCAAAATT+CGG 0.409327 4.1:+70361063 MS.gene94887:CDS
CTTGCAGAATCATCACTTCC+CGG 0.423337 4.1:-70361024 None:intergenic
TTCACGGTTCTTGTTGATGA+TGG 0.431601 4.1:-70360812 None:intergenic
TGGTTTGCTGCTAATCTTCG+TGG 0.442434 4.1:+70361111 MS.gene94887:CDS
TCCATTGTTGCGAATAGAAA+CGG 0.447494 4.1:-70360906 None:intergenic
GTGCCATGTACTATTTGATC+TGG 0.449942 4.1:+70358903 MS.gene94887:CDS
TGTAGATAACGGGTTCTGTA+TGG 0.450391 4.1:+70359330 MS.gene94887:intron
TATTGACTTCTGGTCTGTAA+TGG 0.451921 4.1:+70358603 MS.gene94887:CDS
GGGTGTTCAACCACTTGTAT+TGG 0.454525 4.1:-70360313 None:intergenic
ATGGAAAACAAAACCTCTCC+AGG 0.456409 4.1:-70360022 None:intergenic
TGGCTAAACAATACGATTTG+TGG 0.457799 4.1:-70358408 None:intergenic
GGTATGAACCGTACCATTCT+CGG 0.464303 4.1:-70358824 None:intergenic
GCATCATCGCTTGCTTCCTC+CGG 0.465125 4.1:+70360262 MS.gene94887:CDS
GCTTGCTTCCTCCGGACCTA+AGG 0.465489 4.1:+70360270 MS.gene94887:CDS
GGTGAACTTGTCATAGATCC+TGG 0.473833 4.1:+70358556 MS.gene94887:CDS
CACTCAAAAGTGGAGCCACT+TGG 0.475086 4.1:+70358236 MS.gene94887:CDS
AAGATAAGAATCTTCTGCAT+TGG 0.478953 4.1:+70358311 MS.gene94887:CDS
TTCACCAGCTCTCTTGAACT+TGG 0.484399 4.1:-70361150 None:intergenic
TTGTTTGAATTTAGTCAAAA+GGG 0.484956 4.1:+70360407 MS.gene94887:CDS
AACGTCTGACTCTTTCCCTT+AGG 0.491093 4.1:-70360286 None:intergenic
CCGCAGCCGGGAATAGGAAA+AGG 0.495377 4.1:-70358139 None:intergenic
TAGCGCTTTGCGATCAATCC+AGG 0.496993 4.1:-70358574 None:intergenic
CTGACTCTTTCCCTTAGGTC+CGG 0.502809 4.1:-70360281 None:intergenic
AATTCACATTTCTTGTATTG+TGG 0.506801 4.1:+70359419 MS.gene94887:CDS
ACTCAAAAGTGGAGCCACTT+GGG 0.508398 4.1:+70358237 MS.gene94887:CDS
GGTTCTTCTCTTTGCTAACA+TGG 0.516697 4.1:+70360544 MS.gene94887:CDS
TCGAGATGAAGGTGCAATGA+AGG 0.522257 4.1:-70358521 None:intergenic
ATTCGCAACAATGGAGAACA+TGG 0.522904 4.1:+70360914 MS.gene94887:CDS
GACGAACCGACATTGATTGA+AGG 0.524267 4.1:-70360196 None:intergenic
TGGAGGAAATGAGGATCAAA+AGG 0.526808 4.1:+70360219 MS.gene94887:CDS
AGAGCGAACTTACATAGTTA+GGG 0.526879 4.1:+70360619 MS.gene94887:CDS
TCCGTTTCTATTCGCAACAA+TGG 0.528384 4.1:+70360905 MS.gene94887:CDS
AGAGTTGCTAACATGGGCAT+TGG 0.533440 4.1:+70360766 MS.gene94887:CDS
TCATCTCGAGTATTTGGAAG+AGG 0.535503 4.1:+70358535 MS.gene94887:CDS
TACAAGTCACAGTATATTGA+AGG 0.537328 4.1:+70357652 MS.gene94887:CDS
TGCAGAAGATTCTTATCTTG+AGG 0.537377 4.1:-70358307 None:intergenic
GAGATGTTGTTCATCATTCG+TGG 0.539150 4.1:+70360659 MS.gene94887:CDS
CTAGAGAGTGTTACTACAGA+TGG 0.541421 4.1:+70360686 MS.gene94887:CDS
ACAGTATATTGAAGGTCAGA+AGG 0.547235 4.1:+70357660 MS.gene94887:CDS
TTTGACGAACTTTGAGGACC+CGG 0.547407 4.1:-70361057 None:intergenic
TAGAACGTAACGACACATGC+TGG 0.547738 4.1:+70359366 MS.gene94887:CDS
ATCAATGTCGGTTCGTCTGG+AGG 0.548219 4.1:+70360202 MS.gene94887:CDS
AGCATTTACGGCGAAGGCGA+AGG 0.549553 4.1:+70360968 MS.gene94887:CDS
TTCTTCATCCCACTTGAGCT+AGG 0.549813 4.1:-70358091 None:intergenic
ACGGCGAAGGCGAAGGAAGG+AGG 0.551733 4.1:+70360975 MS.gene94887:CDS
GCACTGAAATCAGGTTCTGA+GGG 0.551873 4.1:-70361183 None:intergenic
AGAAGTGGCTTCTTCAACAG+AGG 0.551875 4.1:+70360713 MS.gene94887:CDS
CTTGCTTCCTCCGGACCTAA+GGG 0.552988 4.1:+70360271 MS.gene94887:CDS
ATTGGAAGATCACTCAAAAG+TGG 0.553145 4.1:+70358226 MS.gene94887:CDS
AGCACTGAAATCAGGTTCTG+AGG 0.553944 4.1:-70361184 None:intergenic
TCTTTATAGTGCAAGACGCA+TGG 0.554243 4.1:+70358748 MS.gene94887:CDS
CGGTTCGTCTGGAGGAAATG+AGG 0.562037 4.1:+70360210 MS.gene94887:CDS
AAGTTCAAGAAAGCATTACC+AGG 0.564923 4.1:+70359442 MS.gene94887:CDS
AGTACCAAGTTCAAGAGAGC+TGG 0.565279 4.1:+70361146 MS.gene94887:CDS
CTTCCAAATACTCGAGATGA+AGG 0.565402 4.1:-70358532 None:intergenic
TCTTCTGATTGGAAACATGC+AGG 0.565687 4.1:+70360078 MS.gene94887:CDS
TGATGATTCTGCAAGGGTGT+TGG 0.565721 4.1:+70361032 MS.gene94887:CDS
ACTACAGATGGTGGAAGAAG+TGG 0.567107 4.1:+70360698 MS.gene94887:CDS
TGTTGTAGATTGTAGTGTGG+AGG 0.567262 4.1:+70358723 MS.gene94887:intron
AATGCATGTAAAGAGGTTGA+AGG 0.567934 4.1:+70359392 MS.gene94887:CDS
TTCATCCCACTTGAGCTAGG+TGG 0.569586 4.1:-70358088 None:intergenic
TTTCTCCAACTTTCATACCC+TGG 0.572709 4.1:-70359460 None:intergenic
TCAATGCCACCTAGCTCAAG+TGG 0.575847 4.1:+70358082 MS.gene94887:CDS
TTGCAGAATCATCACTTCCC+GGG 0.577164 4.1:-70361023 None:intergenic
CTCAAAAGTGGAGCCACTTG+GGG 0.580549 4.1:+70358238 MS.gene94887:CDS
CCATAGTAATAGCTATTATG+GGG 0.581237 4.1:+70360041 MS.gene94887:CDS
GTTCGCTCTGTATATAAACT+CGG 0.583622 4.1:-70360605 None:intergenic
AAGGATCACAAGCTACAGAA+AGG 0.585049 4.1:-70358360 None:intergenic
ATACTGCGAATCTGATTACC+CGG 0.585844 4.1:+70361005 MS.gene94887:CDS
TTTACGGCGAAGGCGAAGGA+AGG 0.587356 4.1:+70360972 MS.gene94887:CDS
GGAGGAAGCATTTACGGCGA+AGG 0.590263 4.1:+70360962 MS.gene94887:CDS
CAATCTATATTCAAGCTGCA+TGG 0.590954 4.1:+70360941 MS.gene94887:CDS
GCGATGATGCATCCACTGCT+CGG 0.598686 4.1:-70360249 None:intergenic
GTTTGTTGTAGATTGTAGTG+TGG 0.607307 4.1:+70358720 MS.gene94887:intron
GAGAGTGTTACTACAGATGG+TGG 0.613056 4.1:+70360689 MS.gene94887:CDS
GACCTACCTTCAATCAATGT+CGG 0.613772 4.1:+70360190 MS.gene94887:intron
CGGGAAGTGATGATTCTGCA+AGG 0.615820 4.1:+70361025 MS.gene94887:CDS
ACTCTTTCCCTTAGGTCCGG+AGG 0.617015 4.1:-70360278 None:intergenic
AAAGGCGTGACTCCGAGCAG+TGG 0.621729 4.1:+70360237 MS.gene94887:CDS
AAACAAAACCTCTCCAGGGT+AGG 0.625990 4.1:-70360017 None:intergenic
GTGGTGAAGAGTTGCTAACA+TGG 0.626286 4.1:+70360759 MS.gene94887:CDS
GACGTTACGACCAATACAAG+TGG 0.629041 4.1:+70360303 MS.gene94887:CDS
AACTAGTACCTACCCTGGAG+AGG 0.630397 4.1:+70360009 MS.gene94887:CDS
TACAAGTGGTTGAACACCCG+AGG 0.630986 4.1:+70360317 MS.gene94887:CDS
TCGTCGAAATCGTTTCGAGT+CGG 0.632480 4.1:+70358172 MS.gene94887:CDS
CTGGAAGAATGCATGTAAAG+AGG 0.634605 4.1:+70359385 MS.gene94887:CDS
TGGAAAACAAAACCTCTCCA+GGG 0.644846 4.1:-70360021 None:intergenic
ATACCAGATCAAATAGTACA+TGG 0.646335 4.1:-70358906 None:intergenic
GGGAAGTGATGATTCTGCAA+GGG 0.650869 4.1:+70361026 MS.gene94887:CDS
CGAACTTACATAGTTAGGGA+AGG 0.656245 4.1:+70360623 MS.gene94887:CDS
CTTCTAACTAGTACCTACCC+TGG 0.665663 4.1:+70360004 MS.gene94887:CDS
CAATGCCACCTAGCTCAAGT+GGG 0.666061 4.1:+70358083 MS.gene94887:CDS
GTCAGAAGGAGAAATTTGTG+AGG 0.668583 4.1:+70357674 MS.gene94887:CDS
AGATGAAGGTGCAATGAAGG+CGG 0.673510 4.1:-70358518 None:intergenic
ACAAGTGGTTGAACACCCGA+GGG 0.676415 4.1:+70360318 MS.gene94887:CDS
TACTGCGAATCTGATTACCC+GGG 0.682660 4.1:+70361006 MS.gene94887:CDS
AGTTCAAGAAAGCATTACCA+GGG 0.683345 4.1:+70359443 MS.gene94887:CDS
TTCGCAACAATGGAGAACAT+GGG 0.684012 4.1:+70360915 MS.gene94887:CDS
TGGTGAAGAGTTGCTAACAT+GGG 0.697702 4.1:+70360760 MS.gene94887:CDS
AAGGTGCAATGAAGGCGGTG+CGG 0.699069 4.1:-70358513 None:intergenic
AACCGACATTGATTGAAGGT+AGG 0.702813 4.1:-70360192 None:intergenic
TCTATATTCAAGCTGCATGG+AGG 0.707083 4.1:+70360944 MS.gene94887:CDS
TTATAGTGCAAGACGCATGG+AGG 0.743128 4.1:+70358751 MS.gene94887:CDS
CAAGTGGTTGAACACCCGAG+GGG 0.768003 4.1:+70360319 MS.gene94887:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTACTAAAAGTAAATTT+TGG - chr4.1:70359179-70359198 None:intergenic 10.0%
!! ATGTTTATTGTATATTCATT+AGG + chr4.1:70359561-70359580 MS.gene94887:intron 15.0%
!!! AAAATGTTTTAAATTCTCTT+AGG + chr4.1:70359716-70359735 MS.gene94887:intron 15.0%
!! CAACAAACATTAAAACATAT+TGG - chr4.1:70358708-70358727 None:intergenic 20.0%
!! TAAGGAAGATAAAAAAAGAA+AGG - chr4.1:70358382-70358401 None:intergenic 20.0%
!! TCACTATGTAAAATATCAAA+TGG - chr4.1:70359862-70359881 None:intergenic 20.0%
!! TTGTTTGAATTTAGTCAAAA+GGG + chr4.1:70360407-70360426 MS.gene94887:CDS 20.0%
!! TTTGTTTGAATTTAGTCAAA+AGG + chr4.1:70360406-70360425 MS.gene94887:CDS 20.0%
!!! ACTATTATTTTGTAGATAAC+GGG + chr4.1:70359320-70359339 MS.gene94887:intron 20.0%
!!! ACTTCATAAAGAAAAAGTAT+TGG + chr4.1:70359017-70359036 MS.gene94887:intron 20.0%
!!! GAAGGTTTTTTTTTTTTTGA+AGG - chr4.1:70359950-70359969 None:intergenic 20.0%
!!! GACTATTATTTTGTAGATAA+CGG + chr4.1:70359319-70359338 MS.gene94887:intron 20.0%
!!! TATATTCCACTTTAAGTTTA+GGG + chr4.1:70357972-70357991 MS.gene94887:intron 20.0%
!!! TATTGGTTAATTTAAGAACA+TGG + chr4.1:70357912-70357931 MS.gene94887:intron 20.0%
!!! TGTGAGGTATTTTTATTTTT+GGG + chr4.1:70357690-70357709 MS.gene94887:intron 20.0%
!!! TTATATTCCACTTTAAGTTT+AGG + chr4.1:70357971-70357990 MS.gene94887:intron 20.0%
!!! TTGTGAGGTATTTTTATTTT+TGG + chr4.1:70357689-70357708 MS.gene94887:intron 20.0%
! AATTCACATTTCTTGTATTG+TGG + chr4.1:70359419-70359438 MS.gene94887:CDS 25.0%
! AATTTAACATGTTTACCAAG+AGG - chr4.1:70359805-70359824 None:intergenic 25.0%
! AGAAGTTTCCATAGAAAAAT+TGG - chr4.1:70359106-70359125 None:intergenic 25.0%
! AGATGCTTATGTTAACAAAT+TGG - chr4.1:70358008-70358027 None:intergenic 25.0%
! CTATTATGAGAATTCATGAA+AGG - chr4.1:70359829-70359848 None:intergenic 25.0%
! GTATAACATATCAATGTGAT+TGG + chr4.1:70357712-70357731 MS.gene94887:intron 25.0%
! GTGTATGACATATATTATTC+AGG + chr4.1:70360523-70360542 MS.gene94887:CDS 25.0%
! GTTAGAAAAGATTATGCTAT+AGG + chr4.1:70359245-70359264 MS.gene94887:intron 25.0%
! TCCATAGTAATAGCTATTAT+GGG + chr4.1:70360040-70360059 MS.gene94887:CDS 25.0%
! TCTTAAGAAATGAACTTACA+TGG - chr4.1:70358943-70358962 None:intergenic 25.0%
! TTCCATAGTAATAGCTATTA+TGG + chr4.1:70360039-70360058 MS.gene94887:CDS 25.0%
!! ATATTTTACATAGTGATGTG+TGG + chr4.1:70359866-70359885 MS.gene94887:intron 25.0%
!! TAGAAAAATTGGATGCTTTT+TGG - chr4.1:70359095-70359114 None:intergenic 25.0%
!! TTTTAGATATCCTGACATAA+AGG + chr4.1:70359223-70359242 MS.gene94887:intron 25.0%
!!! AAAAGCATCCAATTTTTCTA+TGG + chr4.1:70359095-70359114 MS.gene94887:intron 25.0%
!!! ATATCTCTTCTAAGATCTTT+TGG - chr4.1:70360374-70360393 None:intergenic 25.0%
!!! GAATTTAAAACATTTTCTCC+CGG - chr4.1:70359712-70359731 None:intergenic 25.0%
!!! TTTTTGAAGGAAAAAACAGA+AGG - chr4.1:70359937-70359956 None:intergenic 25.0%
AAGATAAGAATCTTCTGCAT+TGG + chr4.1:70358311-70358330 MS.gene94887:CDS 30.0%
AATTAACCAATAGAACCAAG+TGG - chr4.1:70357904-70357923 None:intergenic 30.0%
AGAAAAGATTATGCTATAGG+CGG + chr4.1:70359248-70359267 MS.gene94887:intron 30.0%
ATACCAGATCAAATAGTACA+TGG - chr4.1:70358909-70358928 None:intergenic 30.0%
CCATAGTAATAGCTATTATG+GGG + chr4.1:70360041-70360060 MS.gene94887:CDS 30.0%
CGAATTGCATTAATAACACA+GGG - chr4.1:70360167-70360186 None:intergenic 30.0%
CTCGATAGATTTGTCATTAA+CGG + chr4.1:70357867-70357886 MS.gene94887:intron 30.0%
GGAAAAAACAGAAGGTTATT+AGG - chr4.1:70359929-70359948 None:intergenic 30.0%
TAATATACAGTGGATGATGT+AGG + chr4.1:70358035-70358054 MS.gene94887:intron 30.0%
TACAAGTCACAGTATATTGA+AGG + chr4.1:70357652-70357671 MS.gene94887:CDS 30.0%
TACGATTTGTGGTTGAAATA+AGG - chr4.1:70358400-70358419 None:intergenic 30.0%
TATCAGACACATATACTCTT+TGG + chr4.1:70359051-70359070 MS.gene94887:intron 30.0%
TCAGAAGTTAAAAAAACAGC+TGG + chr4.1:70358854-70358873 MS.gene94887:CDS 30.0%
TCGAATTGCATTAATAACAC+AGG - chr4.1:70360168-70360187 None:intergenic 30.0%
TCTTTCAGACTAATATACAG+TGG + chr4.1:70358025-70358044 MS.gene94887:intron 30.0%
TTTCCATTATCTTAACTCTC+TGG + chr4.1:70357746-70357765 MS.gene94887:intron 30.0%
! AATATTTTCCGAGAATGGTA+CGG + chr4.1:70358816-70358835 MS.gene94887:CDS 30.0%
! AATCTATCGAGAGTATATCA+AGG - chr4.1:70357858-70357877 None:intergenic 30.0%
! GAGACTATTAATCTGGATTT+TGG + chr4.1:70357782-70357801 MS.gene94887:intron 30.0%
! TCTTTTCTAACCTTTATGTC+AGG - chr4.1:70359236-70359255 None:intergenic 30.0%
! TTGAAGGAAGGTAATTTTTG+TGG + chr4.1:70360740-70360759 MS.gene94887:CDS 30.0%
!! GCTATTTCATTATTGACTTC+TGG + chr4.1:70358593-70358612 MS.gene94887:CDS 30.0%
!! TATTAATCTGGATTTTGGTC+AGG + chr4.1:70357787-70357806 MS.gene94887:intron 30.0%
!! TCAGATGGACTAATGAATAT+TGG + chr4.1:70358208-70358227 MS.gene94887:CDS 30.0%
!! TTTTCTGAAAATGCATTGCT+TGG + chr4.1:70358881-70358900 MS.gene94887:CDS 30.0%
!!! AGTAAATTTTGGTGTCCAAT+CGG - chr4.1:70359168-70359187 None:intergenic 30.0%
!!! TTTTTAACTTCTGAAGCCAA+AGG - chr4.1:70358848-70358867 None:intergenic 30.0%
AACTGAACTTAAAACAGGAG+AGG - chr4.1:70359893-70359912 None:intergenic 35.0%
AATGCATGTAAAGAGGTTGA+AGG + chr4.1:70359392-70359411 MS.gene94887:CDS 35.0%
ACAGTATATTGAAGGTCAGA+AGG + chr4.1:70357660-70357679 MS.gene94887:CDS 35.0%
AGAGCGAACTTACATAGTTA+GGG + chr4.1:70360619-70360638 MS.gene94887:CDS 35.0%
AGTACACAAAACATAGAGCA+TGG - chr4.1:70358654-70358673 None:intergenic 35.0%
ATACAACAGTCTATGCTTCT+TGG + chr4.1:70361091-70361110 MS.gene94887:CDS 35.0%
ATGAACAACATCTCATCAAC+TGG - chr4.1:70360653-70360672 None:intergenic 35.0%
ATTGGAAGATCACTCAAAAG+TGG + chr4.1:70358226-70358245 MS.gene94887:CDS 35.0%
ATTTGTCATTCATGTCCTCT+TGG + chr4.1:70359787-70359806 MS.gene94887:intron 35.0%
CAATCTATATTCAAGCTGCA+TGG + chr4.1:70360941-70360960 MS.gene94887:CDS 35.0%
CATAAGTGATACAGAAGCAA+TGG - chr4.1:70358987-70359006 None:intergenic 35.0%
CCCCATAATAGCTATTACTA+TGG - chr4.1:70360044-70360063 None:intergenic 35.0%
CCTCAAAGTTCGTCAAAATT+CGG + chr4.1:70361063-70361082 MS.gene94887:CDS 35.0%
GAAACATTGATCATTCGTGT+CGG - chr4.1:70359294-70359313 None:intergenic 35.0%
GAACCAGAGAGTTAAGATAA+TGG - chr4.1:70357752-70357771 None:intergenic 35.0%
GTTCGCTCTGTATATAAACT+CGG - chr4.1:70360608-70360627 None:intergenic 35.0%
TAGAACTTGATAGAACATGC+TGG + chr4.1:70359514-70359533 MS.gene94887:intron 35.0%
TAGACACATACATAGTAGAC+AGG + chr4.1:70360870-70360889 MS.gene94887:intron 35.0%
TCAATTCCTCATAGCTTTCA+CGG - chr4.1:70360831-70360850 None:intergenic 35.0%
TCCATTGTTGCGAATAGAAA+CGG - chr4.1:70360909-70360928 None:intergenic 35.0%
TCTGTATCACTTATGAAGCT+CGG + chr4.1:70358992-70359011 MS.gene94887:intron 35.0%
TGACCAACTGAACTTAAAAC+AGG - chr4.1:70359898-70359917 None:intergenic 35.0%
TGCAGAAGATTCTTATCTTG+AGG - chr4.1:70358310-70358329 None:intergenic 35.0%
TGCATACCCTAAACTTAAAG+TGG - chr4.1:70357981-70358000 None:intergenic 35.0%
TGGCTAAACAATACGATTTG+TGG - chr4.1:70358411-70358430 None:intergenic 35.0%
! ATCGAGAGTATATCAAGGTT+CGG - chr4.1:70357853-70357872 None:intergenic 35.0%
! ATGATGTAGGTTGGATGATT+TGG + chr4.1:70358048-70358067 MS.gene94887:intron 35.0%
! CATGCAATATTTTCCGAGAA+TGG + chr4.1:70358811-70358830 MS.gene94887:CDS 35.0%
!! AAGTTCAAGAAAGCATTACC+AGG + chr4.1:70359442-70359461 MS.gene94887:CDS 35.0%
!! ACTTGCTAGCTTGTTATCTA+TGG - chr4.1:70358431-70358450 None:intergenic 35.0%
!! AGTTCAAGAAAGCATTACCA+GGG + chr4.1:70359443-70359462 MS.gene94887:CDS 35.0%
!! CATTAACCACTTGGTTCTAT+TGG + chr4.1:70357895-70357914 MS.gene94887:intron 35.0%
!! GTTTGTTGTAGATTGTAGTG+TGG + chr4.1:70358720-70358739 MS.gene94887:intron 35.0%
!! TATCTTAACTCTCTGGTTCT+CGG + chr4.1:70357753-70357772 MS.gene94887:intron 35.0%
!! TATTGACTTCTGGTCTGTAA+TGG + chr4.1:70358603-70358622 MS.gene94887:CDS 35.0%
!! TGTGACACTTTAAGATCTTC+TGG - chr4.1:70358271-70358290 None:intergenic 35.0%
!! TTTGCTTTTCACAGTACACT+TGG + chr4.1:70359974-70359993 MS.gene94887:intron 35.0%
!!! GTAAATTTTGGTGTCCAATC+GGG - chr4.1:70359167-70359186 None:intergenic 35.0%
!!! TCTCCTGTTTTAAGTTCAGT+TGG + chr4.1:70359892-70359911 MS.gene94887:intron 35.0%
AAAGCTGCAAAGGAAAAGGT+AGG - chr4.1:70359651-70359670 None:intergenic 40.0%
AAGGATCACAAGCTACAGAA+AGG - chr4.1:70358363-70358382 None:intergenic 40.0%
AAGGTAGGCTCGACTTTATT+AGG - chr4.1:70359636-70359655 None:intergenic 40.0%
AATGGTACGGTTCATACCTT+TGG + chr4.1:70358829-70358848 MS.gene94887:CDS 40.0%
ACGGAAGTTCATTAACCACT+TGG + chr4.1:70357886-70357905 MS.gene94887:intron 40.0%
ACTTCTTGATACTTCCCGAT+TGG + chr4.1:70359150-70359169 MS.gene94887:intron 40.0%
AGGGGTCGATGAAGAAAATT+TGG + chr4.1:70360337-70360356 MS.gene94887:CDS 40.0%
ATACAGTGGATGATGTAGGT+TGG + chr4.1:70358039-70358058 MS.gene94887:intron 40.0%
ATACTGCGAATCTGATTACC+CGG + chr4.1:70361005-70361024 MS.gene94887:CDS 40.0%
ATGGAAAACAAAACCTCTCC+AGG - chr4.1:70360025-70360044 None:intergenic 40.0%
ATTCGCAACAATGGAGAACA+TGG + chr4.1:70360914-70360933 MS.gene94887:CDS 40.0%
CAGAGCGAACTTACATAGTT+AGG + chr4.1:70360618-70360637 MS.gene94887:CDS 40.0%
CATTACCAGGGTATGAAAGT+TGG + chr4.1:70359455-70359474 MS.gene94887:intron 40.0%
CGAACTTACATAGTTAGGGA+AGG + chr4.1:70360623-70360642 MS.gene94887:CDS 40.0%
CTGGAAGAATGCATGTAAAG+AGG + chr4.1:70359385-70359404 MS.gene94887:CDS 40.0%
CTGTGAAAAGCAAACACAGA+AGG - chr4.1:70359968-70359987 None:intergenic 40.0%
CTTCCAAATACTCGAGATGA+AGG - chr4.1:70358535-70358554 None:intergenic 40.0%
GACCTACCTTCAATCAATGT+CGG + chr4.1:70360190-70360209 MS.gene94887:intron 40.0%
GAGATGTTGTTCATCATTCG+TGG + chr4.1:70360659-70360678 MS.gene94887:CDS 40.0%
GGGGAAAGAGACTATTAATC+TGG + chr4.1:70357775-70357794 MS.gene94887:intron 40.0%
GGTTCTTCTCTTTGCTAACA+TGG + chr4.1:70360544-70360563 MS.gene94887:CDS 40.0%
GTCAGAAGGAGAAATTTGTG+AGG + chr4.1:70357674-70357693 MS.gene94887:CDS 40.0%
GTGCCATGTACTATTTGATC+TGG + chr4.1:70358903-70358922 MS.gene94887:CDS 40.0%
TCATCTCGAGTATTTGGAAG+AGG + chr4.1:70358535-70358554 MS.gene94887:CDS 40.0%
TCCGTTTCTATTCGCAACAA+TGG + chr4.1:70360905-70360924 MS.gene94887:CDS 40.0%
TCTATATTCAAGCTGCATGG+AGG + chr4.1:70360944-70360963 MS.gene94887:CDS 40.0%
TCTTCTGATTGGAAACATGC+AGG + chr4.1:70360078-70360097 MS.gene94887:CDS 40.0%
TCTTTATAGTGCAAGACGCA+TGG + chr4.1:70358748-70358767 MS.gene94887:CDS 40.0%
TGACAAAGCTGCAAAGGAAA+AGG - chr4.1:70359655-70359674 None:intergenic 40.0%
TGCAATGAGCAATCTCAGAA+AGG - chr4.1:70360457-70360476 None:intergenic 40.0%
TGGAAAACAAAACCTCTCCA+GGG - chr4.1:70360024-70360043 None:intergenic 40.0%
TGGAGGAAATGAGGATCAAA+AGG + chr4.1:70360219-70360238 MS.gene94887:CDS 40.0%
TGGATTGTGTCTCAAACTTG+TGG - chr4.1:70358634-70358653 None:intergenic 40.0%
TGGTGAAGAGTTGCTAACAT+GGG + chr4.1:70360760-70360779 MS.gene94887:CDS 40.0%
TGTTGTAGATTGTAGTGTGG+AGG + chr4.1:70358723-70358742 MS.gene94887:intron 40.0%
TTCGCAACAATGGAGAACAT+GGG + chr4.1:70360915-70360934 MS.gene94887:CDS 40.0%
TTTCACAGTACACTTGGTCA+GGG + chr4.1:70359980-70359999 MS.gene94887:intron 40.0%
TTTCTCCAACTTTCATACCC+TGG - chr4.1:70359463-70359482 None:intergenic 40.0%
TTTGTCATCATCCATCCCTT+TGG + chr4.1:70359668-70359687 MS.gene94887:intron 40.0%
! AACCGACATTGATTGAAGGT+AGG - chr4.1:70360195-70360214 None:intergenic 40.0%
! AATTTTCTTCATCGACCCCT+CGG - chr4.1:70360337-70360356 None:intergenic 40.0%
! GAAGTATCAAGAAGTGTACG+AGG - chr4.1:70359145-70359164 None:intergenic 40.0%
! TGTTTGCCTTTTCCTATTCC+CGG + chr4.1:70358133-70358152 MS.gene94887:CDS 40.0%
! TTCACGGTTCTTGTTGATGA+TGG - chr4.1:70360815-70360834 None:intergenic 40.0%
! TTCTGGAAAAATTCCCCAAG+TGG - chr4.1:70358254-70358273 None:intergenic 40.0%
! TTTCGAGTCGGAGTGAAAAA+GGG + chr4.1:70358184-70358203 MS.gene94887:CDS 40.0%
! TTTTCACAGTACACTTGGTC+AGG + chr4.1:70359979-70359998 MS.gene94887:intron 40.0%
!! ATCTTAACTCTCTGGTTCTC+GGG + chr4.1:70357754-70357773 MS.gene94887:intron 40.0%
!! CCGAATTTTGACGAACTTTG+AGG - chr4.1:70361066-70361085 None:intergenic 40.0%
!! CTAGAGAGTGTTACTACAGA+TGG + chr4.1:70360686-70360705 MS.gene94887:CDS 40.0%
!! CTTCAACAGAGGAGTTTTGA+AGG + chr4.1:70360724-70360743 MS.gene94887:CDS 40.0%
!! TCATTGAGAGCACTGAAATC+AGG - chr4.1:70361195-70361214 None:intergenic 40.0%
!! TGTAGATAACGGGTTCTGTA+TGG + chr4.1:70359330-70359349 MS.gene94887:intron 40.0%
!!! AACAGAGGAGTTTTGAAGGA+AGG + chr4.1:70360728-70360747 MS.gene94887:CDS 40.0%
AAACAAAACCTCTCCAGGGT+AGG - chr4.1:70360020-70360039 None:intergenic 45.0%
AAACGATCATGCCAAAGGGA+TGG - chr4.1:70359682-70359701 None:intergenic 45.0%
AACGTCTGACTCTTTCCCTT+AGG - chr4.1:70360289-70360308 None:intergenic 45.0%
ACCCAAACGATCATGCCAAA+GGG - chr4.1:70359686-70359705 None:intergenic 45.0%
ACTCAAAAGTGGAGCCACTT+GGG + chr4.1:70358237-70358256 MS.gene94887:CDS 45.0%
AGAAGTGGCTTCTTCAACAG+AGG + chr4.1:70360713-70360732 MS.gene94887:CDS 45.0%
AGAGTTGCTAACATGGGCAT+TGG + chr4.1:70360766-70360785 MS.gene94887:CDS 45.0%
AGGCTCGACTTTATTAGGAG+AGG - chr4.1:70359631-70359650 None:intergenic 45.0%
AGTACCAAGTTCAAGAGAGC+TGG + chr4.1:70361146-70361165 MS.gene94887:CDS 45.0%
ATCAAGGTTCGGATCTTGAC+TGG - chr4.1:70357842-70357861 None:intergenic 45.0%
ATCCCTTTGGCATGATCGTT+TGG + chr4.1:70359681-70359700 MS.gene94887:intron 45.0%
CAAGAACCGTGAAAGCTATG+AGG + chr4.1:70360822-70360841 MS.gene94887:intron 45.0%
CTCGACTTTATTAGGAGAGG+TGG - chr4.1:70359628-70359647 None:intergenic 45.0%
CTTCTAACTAGTACCTACCC+TGG + chr4.1:70360004-70360023 MS.gene94887:CDS 45.0%
CTTGCAGAATCATCACTTCC+CGG - chr4.1:70361027-70361046 None:intergenic 45.0%
GACGTTACGACCAATACAAG+TGG + chr4.1:70360303-70360322 MS.gene94887:CDS 45.0%
GCACCTTCATCTCGAGTATT+TGG + chr4.1:70358529-70358548 MS.gene94887:CDS 45.0%
GGAGTGAAAAAGGGATCAGA+TGG + chr4.1:70358193-70358212 MS.gene94887:CDS 45.0%
GGATGATGACAAAGCTGCAA+AGG - chr4.1:70359661-70359680 None:intergenic 45.0%
GGGAAGTGATGATTCTGCAA+GGG + chr4.1:70361026-70361045 MS.gene94887:CDS 45.0%
GGGTGTTCAACCACTTGTAT+TGG - chr4.1:70360316-70360335 None:intergenic 45.0%
GGTATGAACCGTACCATTCT+CGG - chr4.1:70358827-70358846 None:intergenic 45.0%
GGTGAACTTGTCATAGATCC+TGG + chr4.1:70358556-70358575 MS.gene94887:CDS 45.0%
GTGCTCTTTGCTCTTCTGAT+TGG + chr4.1:70360067-70360086 MS.gene94887:CDS 45.0%
GTGGTGAAGAGTTGCTAACA+TGG + chr4.1:70360759-70360778 MS.gene94887:CDS 45.0%
TACTGCGAATCTGATTACCC+GGG + chr4.1:70361006-70361025 MS.gene94887:CDS 45.0%
TAGAACGTAACGACACATGC+TGG + chr4.1:70359366-70359385 MS.gene94887:CDS 45.0%
TCCCTTTGGCATGATCGTTT+GGG + chr4.1:70359682-70359701 MS.gene94887:intron 45.0%
TTATAGTGCAAGACGCATGG+AGG + chr4.1:70358751-70358770 MS.gene94887:CDS 45.0%
TTCACAGTACACTTGGTCAG+GGG + chr4.1:70359981-70360000 MS.gene94887:intron 45.0%
TTCACCAGCTCTCTTGAACT+TGG - chr4.1:70361153-70361172 None:intergenic 45.0%
TTCTTCATCCCACTTGAGCT+AGG - chr4.1:70358094-70358113 None:intergenic 45.0%
TTGCAGAATCATCACTTCCC+GGG - chr4.1:70361026-70361045 None:intergenic 45.0%
! AGATGAAGGTGCAATGAAGG+CGG - chr4.1:70358521-70358540 None:intergenic 45.0%
! AGCACTGAAATCAGGTTCTG+AGG - chr4.1:70361187-70361206 None:intergenic 45.0%
! ATTTTCTTCATCGACCCCTC+GGG - chr4.1:70360336-70360355 None:intergenic 45.0%
! GACGAACCGACATTGATTGA+AGG - chr4.1:70360199-70360218 None:intergenic 45.0%
! GCACTGAAATCAGGTTCTGA+GGG - chr4.1:70361186-70361205 None:intergenic 45.0%
! GTTTCGAGTCGGAGTGAAAA+AGG + chr4.1:70358183-70358202 MS.gene94887:CDS 45.0%
! TCGAGATGAAGGTGCAATGA+AGG - chr4.1:70358524-70358543 None:intergenic 45.0%
! TCGTCGAAATCGTTTCGAGT+CGG + chr4.1:70358172-70358191 MS.gene94887:CDS 45.0%
! TGATGATTCTGCAAGGGTGT+TGG + chr4.1:70361032-70361051 MS.gene94887:CDS 45.0%
! TTTGACGAACTTTGAGGACC+CGG - chr4.1:70361060-70361079 None:intergenic 45.0%
!! AAATCAGGTTCTGAGGGCTT+TGG - chr4.1:70361180-70361199 None:intergenic 45.0%
!! AATCAGGTTCTGAGGGCTTT+GGG - chr4.1:70361179-70361198 None:intergenic 45.0%
!! ACTACAGATGGTGGAAGAAG+TGG + chr4.1:70360698-70360717 MS.gene94887:CDS 45.0%
!! CTGCATGGAGGAAGCATTTA+CGG + chr4.1:70360956-70360975 MS.gene94887:CDS 45.0%
!! GAGAGTGTTACTACAGATGG+TGG + chr4.1:70360689-70360708 MS.gene94887:CDS 45.0%
!! GGTAAGCTTGCTGCAGATTT+CGG - chr4.1:70360794-70360813 None:intergenic 45.0%
!! TCAATCAATGTCGGTTCGTC+TGG + chr4.1:70360199-70360218 MS.gene94887:CDS 45.0%
!! TCTTAACTCTCTGGTTCTCG+GGG + chr4.1:70357755-70357774 MS.gene94887:intron 45.0%
!! TGGTTTGCTGCTAATCTTCG+TGG + chr4.1:70361111-70361130 MS.gene94887:CDS 45.0%
!!! CGAATTTTTTTTCCCGCAGC+CGG - chr4.1:70358155-70358174 None:intergenic 45.0%
!!! GAATTTTTTTTCCCGCAGCC+GGG - chr4.1:70358154-70358173 None:intergenic 45.0%
AACTAGTACCTACCCTGGAG+AGG + chr4.1:70360009-70360028 MS.gene94887:CDS 50.0%
ACAAGTGGTTGAACACCCGA+GGG + chr4.1:70360318-70360337 MS.gene94887:CDS 50.0%
CAATGCCACCTAGCTCAAGT+GGG + chr4.1:70358083-70358102 MS.gene94887:CDS 50.0%
CACTCAAAAGTGGAGCCACT+TGG + chr4.1:70358236-70358255 MS.gene94887:CDS 50.0%
CATGATCGTTTGGGTCATCC+GGG + chr4.1:70359691-70359710 MS.gene94887:intron 50.0%
CGGGAAGTGATGATTCTGCA+AGG + chr4.1:70361025-70361044 MS.gene94887:CDS 50.0%
CTCAAAAGTGGAGCCACTTG+GGG + chr4.1:70358238-70358257 MS.gene94887:CDS 50.0%
CTGACTCTTTCCCTTAGGTC+CGG - chr4.1:70360284-70360303 None:intergenic 50.0%
GACCCAAACGATCATGCCAA+AGG - chr4.1:70359687-70359706 None:intergenic 50.0%
GCATGATCGTTTGGGTCATC+CGG + chr4.1:70359690-70359709 MS.gene94887:intron 50.0%
TACAAGTGGTTGAACACCCG+AGG + chr4.1:70360317-70360336 MS.gene94887:CDS 50.0%
TAGCGCTTTGCGATCAATCC+AGG - chr4.1:70358577-70358596 None:intergenic 50.0%
TCAATGCCACCTAGCTCAAG+TGG + chr4.1:70358082-70358101 MS.gene94887:CDS 50.0%
TTCATCCCACTTGAGCTAGG+TGG - chr4.1:70358091-70358110 None:intergenic 50.0%
! TGCAAGACGCATGGAGGTAT+TGG + chr4.1:70358757-70358776 MS.gene94887:CDS 50.0%
!! ATCAATGTCGGTTCGTCTGG+AGG + chr4.1:70360202-70360221 MS.gene94887:CDS 50.0%
!! CTTAACTCTCTGGTTCTCGG+GGG + chr4.1:70357756-70357775 MS.gene94887:intron 50.0%
!! GCTAGGTGGCATTGACGAAT+TGG - chr4.1:70358077-70358096 None:intergenic 50.0%
!! TTCTGCAAGGGTGTTGGTTC+CGG + chr4.1:70361038-70361057 MS.gene94887:CDS 50.0%
AAGGTGCAATGAAGGCGGTG+CGG - chr4.1:70358516-70358535 None:intergenic 55.0%
ACTCTTTCCCTTAGGTCCGG+AGG - chr4.1:70360281-70360300 None:intergenic 55.0%
AGCATTTACGGCGAAGGCGA+AGG + chr4.1:70360968-70360987 MS.gene94887:CDS 55.0%
CAAGTGGTTGAACACCCGAG+GGG + chr4.1:70360319-70360338 MS.gene94887:CDS 55.0%
CAATGAAGGCGGTGCGGAAT+TGG - chr4.1:70358510-70358529 None:intergenic 55.0%
CGGTTCGTCTGGAGGAAATG+AGG + chr4.1:70360210-70360229 MS.gene94887:CDS 55.0%
CTTGCTTCCTCCGGACCTAA+GGG + chr4.1:70360271-70360290 MS.gene94887:CDS 55.0%
GCATCATCGCTTGCTTCCTC+CGG + chr4.1:70360262-70360281 MS.gene94887:CDS 55.0%
GCGATGATGCATCCACTGCT+CGG - chr4.1:70360252-70360271 None:intergenic 55.0%
TTTACGGCGAAGGCGAAGGA+AGG + chr4.1:70360972-70360991 MS.gene94887:CDS 55.0%
! CCTTTTCCTATTCCCGGCTG+CGG + chr4.1:70358139-70358158 MS.gene94887:CDS 55.0%
! CTTTTCCTATTCCCGGCTGC+GGG + chr4.1:70358140-70358159 MS.gene94887:CDS 55.0%
! TTTTTCCCGCAGCCGGGAAT+AGG - chr4.1:70358148-70358167 None:intergenic 55.0%
!! GGAGGAAGCATTTACGGCGA+AGG + chr4.1:70360962-70360981 MS.gene94887:CDS 55.0%
!! TCTGCAAGGGTGTTGGTTCC+GGG + chr4.1:70361039-70361058 MS.gene94887:CDS 55.0%
CCGCAGCCGGGAATAGGAAA+AGG - chr4.1:70358142-70358161 None:intergenic 60.0%
GCTTGCTTCCTCCGGACCTA+AGG + chr4.1:70360270-70360289 MS.gene94887:CDS 60.0%
! AAAGGCGTGACTCCGAGCAG+TGG + chr4.1:70360237-70360256 MS.gene94887:CDS 60.0%
ACGGCGAAGGCGAAGGAAGG+AGG + chr4.1:70360975-70360994 MS.gene94887:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 70357637 70361224 70357637 ID=MS.gene94887
chr4.1 mRNA 70357637 70361224 70357637 ID=MS.gene94887.t1;Parent=MS.gene94887
chr4.1 exon 70357637 70357695 70357637 ID=MS.gene94887.t1.exon1;Parent=MS.gene94887.t1
chr4.1 CDS 70357637 70357695 70357637 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70358057 70358636 70358057 ID=MS.gene94887.t1.exon2;Parent=MS.gene94887.t1
chr4.1 CDS 70358057 70358636 70358057 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70358731 70358943 70358731 ID=MS.gene94887.t1.exon3;Parent=MS.gene94887.t1
chr4.1 CDS 70358731 70358943 70358731 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70359335 70359472 70359335 ID=MS.gene94887.t1.exon4;Parent=MS.gene94887.t1
chr4.1 CDS 70359335 70359472 70359335 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70360001 70360099 70360001 ID=MS.gene94887.t1.exon5;Parent=MS.gene94887.t1
chr4.1 CDS 70360001 70360099 70360001 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70360191 70360428 70360191 ID=MS.gene94887.t1.exon6;Parent=MS.gene94887.t1
chr4.1 CDS 70360191 70360428 70360191 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70360486 70360829 70360486 ID=MS.gene94887.t1.exon7;Parent=MS.gene94887.t1
chr4.1 CDS 70360486 70360829 70360486 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
chr4.1 exon 70360892 70361224 70360892 ID=MS.gene94887.t1.exon8;Parent=MS.gene94887.t1
chr4.1 CDS 70360892 70361224 70360892 ID=cds.MS.gene94887.t1;Parent=MS.gene94887.t1
Gene Sequence

>MS.gene94887

ATGTTTGATTCTGGTTACAAGTCACAGTATATTGAAGGTCAGAAGGAGAAATTTGTGAGGTATTTTTATTTTTGGGTATAACATATCAATGTGATTGGTTACGTTTTTTTTTCCATTATCTTAACTCTCTGGTTCTCGGGGGAAAGAGACTATTAATCTGGATTTTGGTCAGGATGTAAGTAAAGTTTGATCAATGATTGTTCCAGTCAAGATCCGAACCTTGATATACTCTCGATAGATTTGTCATTAACGGAAGTTCATTAACCACTTGGTTCTATTGGTTAATTTAAGAACATGGACTAAATTTTGATTTTACTTGCATTTTTTTTTTTTGTTATATTCCACTTTAAGTTTAGGGTATGCAATGTCCAATTTGTTAACATAAGCATCTTTCAGACTAATATACAGTGGATGATGTAGGTTGGATGATTTGGATTCCAATTCGTCAATGCCACCTAGCTCAAGTGGGATGAAGAAGTTAAGATTTAATTTAGATTGTTTGCCTTTTCCTATTCCCGGCTGCGGGAAAAAAAATTCGTCGAAATCGTTTCGAGTCGGAGTGAAAAAGGGATCAGATGGACTAATGAATATTGGAAGATCACTCAAAAGTGGAGCCACTTGGGGAATTTTTCCAGAAGATCTTAAAGTGTCACAGAAAAAAGTATTTGATCCTCAAGATAAGAATCTTCTGCATTGGAACAAGTTTTTTGAGATTCTATGCATCCTTTCTGTAGCTTGTGATCCTTTCTTTTTTTATCTTCCTTATTTCAACCACAAATCGTATTGTTTAGCCATAGATAACAAGCTAGCAAGTTTTACTGTTACATTGAGAACAATATGTGATTGTATTTATGTCATTCGCATAAGTTTCCAATTCCGCACCGCCTTCATTGCACCTTCATCTCGAGTATTTGGAAGAGGTGAACTTGTCATAGATCCTGGATTGATCGCAAAGCGCTATTTCATTATTGACTTCTGGTCTGTAATGGCACTGCCACAAGTTTGAGACACAATCCATGCTCTATGTTTTGTGTACTACATAACGTCTCGTCTTTTTTTTTTTTTTTGCCAATATGTTTTAATGTTTGTTGTAGATTGTAGTGTGGAGGTATCTTTATAGTGCAAGACGCATGGAGGTATTGGATACAAAAACATCACTATTGAGACATGTTATCATGCAATATTTTCCGAGAATGGTACGGTTCATACCTTTGGCTTCAGAAGTTAAAAAAACAGCTGGTGTTTTTTCTGAAAATGCATTGCTTGGTGCCATGTACTATTTGATCTGGTATATGCTTGCTAGCCATGTAAGTTCATTTCTTAAGACAAATCTTATGTTTTAATTCTCCATTGCTTCTGTATCACTTATGAAGCTCGGATACTTCATAAAGAAAAAGTATTGGTGTCGTATCTGTATCAGACACATATACTCTTTGGATATTTCTCAATACGTGTCCAAAAAGCATCCAATTTTTCTATGGAAACTTCTCATTAAAATCGATACTCCTCGTACACTTCTTGATACTTCCCGATTGGACACCAAAATTTACTTTTAGTAAATTTTTTGAGTTGTAACTATGATGCTTTTTTAGATATCCTGACATAAAGGTTAGAAAAGATTATGCTATAGGCGGAAATTCTAACATTCTTGTTACCGACACGAATGATCAATGTTTCTTTTTGACTATTATTTTGTAGATAACGGGTTCTGTATGGTACTTACTAGCTATAGAACGTAACGACACATGCTGGAAGAATGCATGTAAAGAGGTTGAAGGATGTAATTCACATTTCTTGTATTGTGGAAGTTCAAGAAAGCATTACCAGGGTATGAAAGTTGGAGAAACTGAACTTAATAGATCATGCAAAATCACGATTAGAACTTGATAGAACATGCTGGATTCAGTAATTATTAGAATCAATTATGTTTATTGTATATTCATTAGGCATTTATTAGAATAAATTATGTTTATTGTATATTCATTAAGCCACCTCTCCTAATAAAGTCGAGCCTACCTTTTCCTTTGCAGCTTTGTCATCATCCATCCCTTTGGCATGATCGTTTGGGTCATCCGGGAGAAAATGTTTTAAATTCTCTTAGGCAAAATAAGTTGATTGAATGTAATAACTCTAGAAAATTACATTCTCATATTTGTCATTCATGTCCTCTTGGTAAACATGTTAAATTGCCTTTCATGAATTCTCATAATAGAAGTTTGTTGCCATTTGATATTTTACATAGTGATGTGTGGACCTCTCCTGTTTTAAGTTCAGTTGGTCACACTTTGACCTAATAACCTTCTGTTTTTTCCTTCAAAAAAAAAAAAACCTTCTGTGTTTGCTTTTCACAGTACACTTGGTCAGGGGCTTCTAACTAGTACCTACCCTGGAGAGGTTTTGTTTTCCATAGTAATAGCTATTATGGGGCTTGTGCTCTTTGCTCTTCTGATTGGAAACATGCAGGTAAACAGAGAGTTTTTACTGTAAACATTGATTTATAGCATCTTGATTACTATAATACTTTAATCCCTGTGTTATTAATGCAATTCGACAGACCTACCTTCAATCAATGTCGGTTCGTCTGGAGGAAATGAGGATCAAAAGGCGTGACTCCGAGCAGTGGATGCATCATCGCTTGCTTCCTCCGGACCTAAGGGAAAGAGTCAGACGTTACGACCAATACAAGTGGTTGAACACCCGAGGGGTCGATGAAGAAAATTTGGTTCAGAGTCTTCCAAAAGATCTTAGAAGAGATATCAAATTTTCATCTTTGTTTGAATTTAGTCAAAAGGGTGAGTACTGAGCAAACTAGTTTGTCCTTTCTGAGATTGCTCATTGCAACAGAAAAGTGTTGCTTCTAACTCTTTATTTTCTCATTAGTATTCTGTGTATGACATATATTATTCAGGTTCTTCTCTTTGCTAACATGGACGAACGCTTGCTTGACGCGATATGTGAGCGATTGAAACCGAGTTTATATACAGAGCGAACTTACATAGTTAGGGAAGGTGATCCAGTTGATGAGATGTTGTTCATCATTCGTGGTCGTCTAGAGAGTGTTACTACAGATGGTGGAAGAAGTGGCTTCTTCAACAGAGGAGTTTTGAAGGAAGGTAATTTTTGTGGTGAAGAGTTGCTAACATGGGCATTGGATCCGAAATCTGCAGCAAGCTTACCATCATCAACAAGAACCGTGAAAGCTATGAGGAATTGAAGTTTGTTGCATCACAGTTTAGACACATACATAGTAGACAGGTTCAGCATACATTCCGTTTCTATTCGCAACAATGGAGAACATGGGCTGCAATCTATATTCAAGCTGCATGGAGGAAGCATTTACGGCGAAGGCGAAGGAAGGAGGAAGAAGAATACTGCGAATCTGATTACCCGGGAAGTGATGATTCTGCAAGGGTGTTGGTTCCGGGTCCTCAAAGTTCGTCAAAATTCGGACTTAATACAACAGTCTATGCTTCTTGGTTTGCTGCTAATCTTCGTGGTCATAGACTTCGAGTACCAAGTTCAAGAGAGCTGGTGAATATCCCAAAGCCCTCAGAACCTGATTTCAGTGCTCTCAATGATGAAGAGTGA
Protein sequence

>MS.gene94887.t1

MFDSGYKSQYIEGQKEKFVRLDDLDSNSSMPPSSSGMKKLRFNLDCLPFPIPGCGKKNSSKSFRVGVKKGSDGLMNIGRSLKSGATWGIFPEDLKVSQKKVFDPQDKNLLHWNKFFEILCILSVACDPFFFYLPYFNHKSYCLAIDNKLASFTVTLRTICDCIYVIRISFQFRTAFIAPSSRVFGRGELVIDPGLIAKRYFIIDFWSVMALPQIVVWRYLYSARRMEVLDTKTSLLRHVIMQYFPRMVRFIPLASEVKKTAGVFSENALLGAMYYLIWYMLASHITGSVWYLLAIERNDTCWKNACKEVEGCNSHFLYCGSSRKHYQGMKGLLTSTYPGEVLFSIVIAIMGLVLFALLIGNMQTYLQSMSVRLEEMRIKRRDSEQWMHHRLLPPDLRERVRRYDQYKWLNTRGVDEENLVQSLPKDLRRDIKFSSLFEFSQKVLLLTLYFLISILCMTYIIQVLLFANMDERLLDAICERLKPSLYTERTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGNFCGEELLTWALDPKSAASLPSSTRTVQHTFRFYSQQWRTWAAIYIQAAWRKHLRRRRRKEEEEYCESDYPGSDDSARVLVPGPQSSSKFGLNTTVYASWFAANLRGHRLRVPSSRELVNIPKPSEPDFSALNDEE