Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94902.t1 | XP_013444623.2 | 87.4 | 1031 | 97 | 3 | 1 | 999 | 1 | 1030 | 0.00E+00 | 1716 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94902.t1 | G8A2Y6 | 87.4 | 1031 | 97 | 3 | 1 | 999 | 1 | 1030 | 0.0e+00 | 1716.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050516 | MS.gene94902 | 0.811267 | 7.63E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94902.t1 | MTR_8g027605 | 88.996 | 1036 | 81 | 3 | 1 | 1004 | 1 | 1035 | 0.0 | 1818 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94902.t1 | AT3G61780 | 39.114 | 1038 | 471 | 30 | 29 | 1007 | 32 | 967 | 0.0 | 588 |
| MS.gene94902.t1 | AT5G28400 | 50.962 | 312 | 116 | 4 | 666 | 975 | 550 | 826 | 1.74e-78 | 277 |
| MS.gene94902.t1 | AT5G28400 | 34.673 | 398 | 202 | 16 | 103 | 467 | 90 | 462 | 2.84e-43 | 171 |
| MS.gene94902.t1 | AT5G28320 | 45.775 | 284 | 95 | 4 | 723 | 1004 | 559 | 785 | 1.16e-63 | 233 |
| MS.gene94902.t1 | AT5G28320 | 29.851 | 469 | 235 | 18 | 49 | 467 | 18 | 442 | 1.60e-32 | 137 |
Find 194 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGCTGGGTTCAAATTTC+TGG | 0.045939 | 8.1:+74613173 | None:intergenic |
| TGAAATTGAGGATAAGATTT+TGG | 0.173645 | 8.1:-74615641 | MS.gene94902:CDS |
| GGATTGGTTCCGAAGCTTTC+GGG | 0.185418 | 8.1:-74615478 | MS.gene94902:CDS |
| ATTCATTTGGTGCTGTTAAA+AGG | 0.188163 | 8.1:-74615708 | MS.gene94902:CDS |
| CAGAATCTTCACTAGGATTT+AGG | 0.204385 | 8.1:+74614225 | None:intergenic |
| TAAATATGAAATCAGATTCT+AGG | 0.223247 | 8.1:-74614253 | MS.gene94902:CDS |
| CTTCCTTCGACAACAGTCTT+TGG | 0.227891 | 8.1:+74613060 | None:intergenic |
| TCGTCGTTCATCAAATAAAA+TGG | 0.238549 | 8.1:+74613813 | None:intergenic |
| TCCTCACGTACTCCTATTAA+TGG | 0.238855 | 8.1:-74614767 | MS.gene94902:CDS |
| TACTATCACCATTAACTTCA+TGG | 0.265220 | 8.1:+74614099 | None:intergenic |
| GTTTGTGATAATAGAGAAAT+TGG | 0.268910 | 8.1:-74614851 | MS.gene94902:CDS |
| GCTTTAGACCGTCAGGTTAA+TGG | 0.269045 | 8.1:-74614362 | MS.gene94902:CDS |
| TTTATCTAGGAATTCATTTA+GGG | 0.278659 | 8.1:+74613215 | None:intergenic |
| TTCATTACGGACTTAACTTC+TGG | 0.279942 | 8.1:+74612934 | None:intergenic |
| CTCCTCTGATAGACTTGCTT+TGG | 0.280462 | 8.1:+74614331 | None:intergenic |
| TGTTGACTAAATTGGAGAAT+TGG | 0.283210 | 8.1:-74615801 | MS.gene94902:CDS |
| AAATGGGTATGAAATAGTTT+TGG | 0.283795 | 8.1:+74616125 | None:intergenic |
| AAATGTTATGTTGACTAAAT+TGG | 0.284856 | 8.1:-74615809 | MS.gene94902:CDS |
| GAATGGCTCCATTCAAATAT+TGG | 0.285154 | 8.1:-74613717 | MS.gene94902:CDS |
| CTTGTTGTTCATAGTTCTTT+TGG | 0.286420 | 8.1:-74615181 | MS.gene94902:CDS |
| TATGACTTCACTCTCATTAG+AGG | 0.291040 | 8.1:+74615015 | None:intergenic |
| TCCATTTAATGTGTCACTTC+TGG | 0.291514 | 8.1:+74614523 | None:intergenic |
| GGGATTGGTTCCGAAGCTTT+CGG | 0.292984 | 8.1:-74615479 | MS.gene94902:CDS |
| GACCGTCAGGTTAATGGCTT+TGG | 0.293894 | 8.1:-74614356 | MS.gene94902:CDS |
| TCCTTCCCATCCTTCTTCGC+TGG | 0.294074 | 8.1:+74613159 | None:intergenic |
| TTCCTAATTTGTTTAATTGT+TGG | 0.296431 | 8.1:+74614287 | None:intergenic |
| TAATTATAGGCTCAACTTCA+TGG | 0.305732 | 8.1:+74614027 | None:intergenic |
| GTCATAAATGAGCCATTAAT+AGG | 0.315826 | 8.1:+74614755 | None:intergenic |
| GTGACGAAGTTGTTTCGTTT+TGG | 0.319590 | 8.1:-74615412 | MS.gene94902:CDS |
| ATCAATGGATATGGACTATA+AGG | 0.320069 | 8.1:-74615143 | MS.gene94902:CDS |
| TCCAGAAGTGACACATTAAA+TGG | 0.321389 | 8.1:-74614524 | MS.gene94902:CDS |
| TTCAAGCACTCATTCTTTGT+TGG | 0.324457 | 8.1:+74614434 | None:intergenic |
| TTCTCTAGTTAGTAAGGATA+TGG | 0.326970 | 8.1:-74615065 | MS.gene94902:CDS |
| AATGAGTGCTTGAAAGATTC+TGG | 0.329353 | 8.1:-74614425 | MS.gene94902:CDS |
| ACTTCAGACCATGAAGTTAA+TGG | 0.337289 | 8.1:-74614107 | MS.gene94902:CDS |
| TTCAAGAAAGTTTCGAACTT+TGG | 0.337300 | 8.1:-74616016 | MS.gene94902:CDS |
| TCAAGCACTCATTCTTTGTT+GGG | 0.340663 | 8.1:+74614435 | None:intergenic |
| GAAGGATATCGGGAAGGATT+TGG | 0.342571 | 8.1:-74612914 | MS.gene94902:CDS |
| GTTAAAGCTGGCAAGAAATC+AGG | 0.342815 | 8.1:-74613027 | MS.gene94902:CDS |
| AATATTGGAAATATTGATTA+CGG | 0.348128 | 8.1:-74613702 | MS.gene94902:CDS |
| AGCCAACAATTAAACAAATT+AGG | 0.349540 | 8.1:-74614289 | MS.gene94902:CDS |
| TCGTGGATTTGTCGTGCAAC+CGG | 0.354531 | 8.1:-74615500 | MS.gene94902:CDS |
| AAGTCCGTAATGAAGGATAT+CGG | 0.355637 | 8.1:-74612925 | MS.gene94902:CDS |
| TCTTCAAAAGTGAAGGTTGA+TGG | 0.364701 | 8.1:-74613111 | MS.gene94902:CDS |
| TTGATGTCACCAATCTTTGT+TGG | 0.364923 | 8.1:+74614179 | None:intergenic |
| TCTACGGAGACACCGGTTAT+AGG | 0.365607 | 8.1:-74615277 | MS.gene94902:CDS |
| TAGTGAATTGCGGCGGTTAG+TGG | 0.371512 | 8.1:+74615978 | None:intergenic |
| GTTGACTAAATTGGAGAATT+GGG | 0.371771 | 8.1:-74615800 | MS.gene94902:CDS |
| GTGGCTAAGTTTATTGTTCA+AGG | 0.375216 | 8.1:-74615556 | MS.gene94902:CDS |
| GTTAGATCTTCCATATGTTC+TGG | 0.376481 | 8.1:-74612701 | MS.gene94902:CDS |
| GCAAGTTACCGGAGAGGAAT+AGG | 0.377809 | 8.1:-74612843 | MS.gene94902:CDS |
| AGAAATCAGGGAAGGAATAT+TGG | 0.380325 | 8.1:-74613014 | MS.gene94902:CDS |
| ACTGTTTATCGAGATTCATT+TGG | 0.388602 | 8.1:-74615721 | MS.gene94902:CDS |
| GGCAAAACAACAGATAATAA+TGG | 0.389811 | 8.1:-74614938 | MS.gene94902:CDS |
| TATTTGAATGGAGCCATTCA+TGG | 0.390352 | 8.1:+74613721 | None:intergenic |
| AACCTTCAAAATGAAGTTGC+AGG | 0.395065 | 8.1:-74614959 | MS.gene94902:CDS |
| GCAAAATCTGGCGTTGAACT+TGG | 0.396324 | 8.1:-74614635 | MS.gene94902:CDS |
| AAAAGAGAGATGGAGTTGTT+TGG | 0.398011 | 8.1:-74612790 | MS.gene94902:CDS |
| AACATACATACCAGAACATA+TGG | 0.398533 | 8.1:+74612691 | None:intergenic |
| CAATATTTCCAATATTTGAA+TGG | 0.400157 | 8.1:+74613709 | None:intergenic |
| TGATCTGATGAGCAAGTTAC+CGG | 0.400354 | 8.1:-74612854 | MS.gene94902:CDS |
| CCTTCCCATCCTTCTTCGCT+GGG | 0.405433 | 8.1:+74613160 | None:intergenic |
| TAGGAATTCATTTAGGGCCT+CGG | 0.408048 | 8.1:+74613221 | None:intergenic |
| AAAGATTCTGGTACGGAACC+TGG | 0.412790 | 8.1:-74614413 | MS.gene94902:CDS |
| TTATTGTCTTCTCTGTCCTT+CGG | 0.415153 | 8.1:+74614791 | None:intergenic |
| GAAAATCCTGATGCAAAATC+TGG | 0.415419 | 8.1:-74614647 | MS.gene94902:CDS |
| GTGCCCGCCTAGCCATTTCT+CGG | 0.417926 | 8.1:+74615110 | None:intergenic |
| GAATTGGGTTGATAAGTATA+AGG | 0.418103 | 8.1:-74615785 | MS.gene94902:CDS |
| TGATGTCACCAATCTTTGTT+GGG | 0.420575 | 8.1:+74614180 | None:intergenic |
| TGTTCAAGGTGAGGAGGAGA+AGG | 0.421697 | 8.1:-74615542 | MS.gene94902:CDS |
| TGGAGGCTAAGAAGCTAGCT+AGG | 0.424554 | 8.1:-74615621 | MS.gene94902:CDS |
| GATAAAGATGCTTTCTTCAA+AGG | 0.426692 | 8.1:-74613789 | MS.gene94902:CDS |
| GTTTGATGAATATAAAGCTC+TGG | 0.429261 | 8.1:+74616092 | None:intergenic |
| TCATTACGGACTTAACTTCT+GGG | 0.434637 | 8.1:+74612935 | None:intergenic |
| CTTCCCGATATCCTTCATTA+CGG | 0.438614 | 8.1:+74612921 | None:intergenic |
| GAGAACTGGATCAATGGATA+TGG | 0.438658 | 8.1:-74615152 | MS.gene94902:CDS |
| GGAAATATTGATTACGGAGC+AGG | 0.442200 | 8.1:-74613696 | MS.gene94902:intron |
| AAGGATCATACGGTCTGTTA+AGG | 0.442534 | 8.1:-74614705 | MS.gene94902:CDS |
| ATTTGTCGTGCAACCGGGAT+TGG | 0.443302 | 8.1:-74615494 | MS.gene94902:CDS |
| ATCTCAGTTGGTATATCTAA+AGG | 0.444572 | 8.1:+74613945 | None:intergenic |
| CGCTGGGTTCAAATTTCTGG+TGG | 0.451496 | 8.1:+74613176 | None:intergenic |
| ACAAAGAAGAAGATTACTTA+TGG | 0.452846 | 8.1:-74612726 | MS.gene94902:CDS |
| GGCACGGGAAATTGAAGGTG+GGG | 0.454187 | 8.1:-74615092 | MS.gene94902:CDS |
| TTCATTTGGTGCTGTTAAAA+GGG | 0.455068 | 8.1:-74615707 | MS.gene94902:CDS |
| GGTTCGAGAAATCCGAGAAA+TGG | 0.455075 | 8.1:-74615122 | MS.gene94902:CDS |
| AACTTTCTCACCTCCATGAA+TGG | 0.455193 | 8.1:-74613734 | MS.gene94902:CDS |
| GGAGGTTCGGTATACTGAAA+TGG | 0.455651 | 8.1:-74615383 | MS.gene94902:CDS |
| TTCTGGTACGGAACCTGGAT+TGG | 0.456796 | 8.1:-74614408 | MS.gene94902:CDS |
| GAAATGGATGACAGTGTGAT+TGG | 0.462283 | 8.1:-74615043 | MS.gene94902:CDS |
| AAATTCAGCCCAACAAAGAT+TGG | 0.468782 | 8.1:-74614188 | MS.gene94902:CDS |
| GGAGAAAGAGATGTTGATGA+AGG | 0.470521 | 8.1:-74615323 | MS.gene94902:CDS |
| AGTTAGTAAGGATATGGAAA+TGG | 0.471596 | 8.1:-74615059 | MS.gene94902:CDS |
| AAATTTGAACCCAGCGAAGA+AGG | 0.476161 | 8.1:-74613169 | MS.gene94902:CDS |
| TTAACAGACCGTATGATCCT+TGG | 0.476893 | 8.1:+74614707 | None:intergenic |
| GAGAAATGGCTAGGCGGGCA+CGG | 0.477439 | 8.1:-74615108 | MS.gene94902:CDS |
| TTTGATGAATATAAAGCTCT+GGG | 0.478502 | 8.1:+74616093 | None:intergenic |
| AGGAATTCATTTAGGGCCTC+GGG | 0.479191 | 8.1:+74613222 | None:intergenic |
| TCAATTGAAGTTGGTGAAGA+TGG | 0.479206 | 8.1:-74613918 | MS.gene94902:CDS |
| AGCTGTTCCTTATCCAACTC+CGG | 0.488724 | 8.1:+74615244 | None:intergenic |
| CGTGGATTTGTCGTGCAACC+GGG | 0.489082 | 8.1:-74615499 | MS.gene94902:CDS |
| AGAAATGGCTAGGCGGGCAC+GGG | 0.492933 | 8.1:-74615107 | MS.gene94902:CDS |
| AGAAGTTAAGTCCGTAATGA+AGG | 0.498391 | 8.1:-74612932 | MS.gene94902:CDS |
| ATTGGCAGCACACAAAGAAA+TGG | 0.498516 | 8.1:-74612996 | MS.gene94902:CDS |
| CGGGCACGGGAAATTGAAGG+TGG | 0.500236 | 8.1:-74615094 | MS.gene94902:CDS |
| CAAAATCTGGCGTTGAACTT+GGG | 0.501150 | 8.1:-74614634 | MS.gene94902:CDS |
| AGTCCGTAATGAAGGATATC+GGG | 0.502671 | 8.1:-74612924 | MS.gene94902:CDS |
| GAACAATATTCTAAAAGCTA+AGG | 0.503860 | 8.1:-74615218 | MS.gene94902:CDS |
| GGATCGTTCTCTAGTTAGTA+AGG | 0.504472 | 8.1:-74615071 | MS.gene94902:CDS |
| ATAATTAAGAAAATTAGAGC+TGG | 0.508482 | 8.1:-74614011 | MS.gene94902:CDS |
| TGAGACCGCTTTAGACCGTC+AGG | 0.510718 | 8.1:-74614369 | MS.gene94902:CDS |
| TCAATTGATTCCATCTCAGT+TGG | 0.510878 | 8.1:+74613933 | None:intergenic |
| AGGCGGGCACGGGAAATTGA+AGG | 0.511289 | 8.1:-74615097 | MS.gene94902:CDS |
| AGTGAATTGCGGCGGTTAGT+GGG | 0.512848 | 8.1:+74615979 | None:intergenic |
| GATTGGTTCCGAAGCTTTCG+GGG | 0.515461 | 8.1:-74615477 | MS.gene94902:CDS |
| AATCCGAGAAATGGCTAGGC+GGG | 0.518930 | 8.1:-74615113 | MS.gene94902:CDS |
| GTTCAAGGTGAGGAGGAGAA+GGG | 0.519648 | 8.1:-74615541 | MS.gene94902:CDS |
| TTGAACCCAGCGAAGAAGGA+TGG | 0.520602 | 8.1:-74613165 | MS.gene94902:CDS |
| TAATAGAGAAATTGGTAAAG+AGG | 0.523622 | 8.1:-74614843 | MS.gene94902:CDS |
| GAAGAAAATTATGATGAGGA+AGG | 0.524338 | 8.1:-74615359 | MS.gene94902:CDS |
| TGAAGTTATTCATGAATCTA+CGG | 0.527203 | 8.1:-74615293 | MS.gene94902:CDS |
| GAAAGCTTCGGAACCAATCC+CGG | 0.533935 | 8.1:+74615481 | None:intergenic |
| TCTTCACTAGGATTTAGGTC+AGG | 0.537081 | 8.1:+74614230 | None:intergenic |
| GCACACAAAGAAATGGTCCC+AGG | 0.542438 | 8.1:-74612989 | MS.gene94902:CDS |
| CAAGCTTCTTCATGATCACC+AGG | 0.544082 | 8.1:-74615950 | MS.gene94902:intron |
| CAACAAACTTAAAAGAGAGA+TGG | 0.547712 | 8.1:-74612800 | MS.gene94902:CDS |
| GGAGAGGAATAGGAGTTTCG+TGG | 0.548033 | 8.1:-74612833 | MS.gene94902:CDS |
| TCGGGAAGGATTTGGATCGC+TGG | 0.550838 | 8.1:-74612906 | MS.gene94902:CDS |
| TTAAAGCTGGCAAGAAATCA+GGG | 0.552825 | 8.1:-74613026 | MS.gene94902:CDS |
| TTTAGATATACCAACTGAGA+TGG | 0.554996 | 8.1:-74613943 | MS.gene94902:CDS |
| AGTTGGTGGAAATGAAATTG+AGG | 0.555616 | 8.1:-74615653 | MS.gene94902:CDS |
| AAAATCATACCGCGGTGGAA+AGG | 0.556657 | 8.1:-74613264 | MS.gene94902:CDS |
| ACGGTCTGTTAAGGAAGCTA+AGG | 0.558154 | 8.1:-74614696 | MS.gene94902:CDS |
| AGTGATGGTTCTGTTAAAGC+TGG | 0.558418 | 8.1:-74613039 | MS.gene94902:CDS |
| ACGAAACTCCTATTCCTCTC+CGG | 0.558498 | 8.1:+74612835 | None:intergenic |
| TAGTGAAGATTCTGATCAGA+AGG | 0.560531 | 8.1:-74614216 | MS.gene94902:CDS |
| AAATGGATGACAGTGTGATT+GGG | 0.560569 | 8.1:-74615042 | MS.gene94902:CDS |
| GAGGAAGGCAAAAGCTAGGA+AGG | 0.562096 | 8.1:-74615344 | MS.gene94902:CDS |
| GGAGGCTAAGAAGCTAGCTA+GGG | 0.562101 | 8.1:-74615620 | MS.gene94902:CDS |
| TAAGTTTATTGTTCAAGGTG+AGG | 0.564177 | 8.1:-74615551 | MS.gene94902:CDS |
| TGAACCCAGCGAAGAAGGAT+GGG | 0.566128 | 8.1:-74613164 | MS.gene94902:CDS |
| GGATTTGGATCGCTGGATCA+CGG | 0.567801 | 8.1:-74612899 | MS.gene94902:CDS |
| ATTTCTGCTAGTGAAACAGT+GGG | 0.568362 | 8.1:+74612662 | None:intergenic |
| TGATGAGGAAGGCAAAAGCT+AGG | 0.569500 | 8.1:-74615348 | MS.gene94902:CDS |
| TGAAGCGAGAACTGGATCAA+TGG | 0.572025 | 8.1:-74615158 | MS.gene94902:CDS |
| GCTTGTTCCTTAGTGAATTG+CGG | 0.575707 | 8.1:+74615968 | None:intergenic |
| TGATTCATCTTCAAAAGTGA+AGG | 0.576728 | 8.1:-74613118 | MS.gene94902:CDS |
| GAGAAAGAGATGTTGATGAA+GGG | 0.579923 | 8.1:-74615322 | MS.gene94902:CDS |
| CTAACCGCCGCAATTCACTA+AGG | 0.580043 | 8.1:-74615975 | MS.gene94902:CDS |
| GTTTATTGTTCAAGGTGAGG+AGG | 0.580520 | 8.1:-74615548 | MS.gene94902:CDS |
| GAGATGGAATCAATTGAAGT+TGG | 0.580583 | 8.1:-74613927 | MS.gene94902:CDS |
| CCCAGCGAAGAAGGATGGGA+AGG | 0.581159 | 8.1:-74613160 | MS.gene94902:CDS |
| TGGAGAACTTGACTGGATGC+AGG | 0.581964 | 8.1:-74613895 | MS.gene94902:CDS |
| AATCCAAAGACTGTTGTCGA+AGG | 0.584144 | 8.1:-74613063 | MS.gene94902:CDS |
| CATTTCTGCTAGTGAAACAG+TGG | 0.587066 | 8.1:+74612661 | None:intergenic |
| ACTGTTGTCGAAGGAAGTGA+TGG | 0.590536 | 8.1:-74613054 | MS.gene94902:CDS |
| AAGAAGAAGATTACTTATGG+TGG | 0.592702 | 8.1:-74612723 | MS.gene94902:CDS |
| CTCTGGTGTTGAACCTGGAG+TGG | 0.593211 | 8.1:-74614153 | MS.gene94902:CDS |
| TGGAGAAGAAAATTATGATG+AGG | 0.598863 | 8.1:-74615363 | MS.gene94902:CDS |
| CTAGCTAGGGAGATGGAGAG+TGG | 0.600488 | 8.1:-74615607 | MS.gene94902:CDS |
| ATTGAAGTTGGTGAAGATGG+TGG | 0.607350 | 8.1:-74613915 | MS.gene94902:CDS |
| GAGAAATCCGAGAAATGGCT+AGG | 0.609762 | 8.1:-74615117 | MS.gene94902:CDS |
| ATTGGTTCCGAAGCTTTCGG+GGG | 0.609923 | 8.1:-74615476 | MS.gene94902:CDS |
| TCATGAATCTACGGAGACAC+CGG | 0.610395 | 8.1:-74615284 | MS.gene94902:CDS |
| GGGCACGGGAAATTGAAGGT+GGG | 0.612757 | 8.1:-74615093 | MS.gene94902:CDS |
| ACAAGAAACCAAGGATCATA+CGG | 0.613507 | 8.1:-74614715 | MS.gene94902:CDS |
| ATTAACTTCATGGTCTGAAG+TGG | 0.613832 | 8.1:+74614109 | None:intergenic |
| TTCTGATCAGAATCTTCACT+AGG | 0.614418 | 8.1:+74614218 | None:intergenic |
| AAGATGGTGGAGAACTTGAC+TGG | 0.620066 | 8.1:-74613902 | MS.gene94902:CDS |
| GTGGTGAAAATGTGATTGCA+AGG | 0.622698 | 8.1:-74615588 | MS.gene94902:CDS |
| AGCTGGCAAGAAATCAGGGA+AGG | 0.624712 | 8.1:-74613022 | MS.gene94902:CDS |
| GAGAATAGCAAACAAGATGA+CGG | 0.628911 | 8.1:-74614989 | MS.gene94902:CDS |
| GCGGTGGAAAGGACCTTCCG+TGG | 0.629888 | 8.1:-74613253 | MS.gene94902:CDS |
| TAAGAAGCTAGCTAGGGAGA+TGG | 0.630468 | 8.1:-74615614 | MS.gene94902:CDS |
| AACCAAAGCCATTAACCTGA+CGG | 0.635485 | 8.1:+74614354 | None:intergenic |
| TGAACTTGGGAAAGAAAGCA+TGG | 0.637704 | 8.1:-74614621 | MS.gene94902:CDS |
| CGATGTTGCTATGACTCCGA+AGG | 0.637863 | 8.1:-74614807 | MS.gene94902:CDS |
| GTGCTTGAAAGATTCTGGTA+CGG | 0.638788 | 8.1:-74614420 | MS.gene94902:CDS |
| GTTCAGTGAACAAGAAACCA+AGG | 0.638861 | 8.1:-74614724 | MS.gene94902:CDS |
| TATTTACTAACTACTGCTTG+CGG | 0.641619 | 8.1:+74612766 | None:intergenic |
| GCCATTAATAGGAGTACGTG+AGG | 0.642843 | 8.1:+74614766 | None:intergenic |
| CGTAATGAAGGATATCGGGA+AGG | 0.654273 | 8.1:-74612920 | MS.gene94902:CDS |
| TTCCAAAGCAAGTCTATCAG+AGG | 0.654421 | 8.1:-74614333 | MS.gene94902:CDS |
| ATTAACCTGACGGTCTAAAG+CGG | 0.667309 | 8.1:+74614364 | None:intergenic |
| TGTTCCTTAGTGAATTGCGG+CGG | 0.670120 | 8.1:+74615971 | None:intergenic |
| GTTCGTGATAATGAATTGTG+TGG | 0.675486 | 8.1:-74613843 | MS.gene94902:CDS |
| TTCCGTGGAGAAAATTCCCG+AGG | 0.680845 | 8.1:-74613238 | MS.gene94902:CDS |
| TGATGAGCAAGTTACCGGAG+AGG | 0.685365 | 8.1:-74612849 | MS.gene94902:CDS |
| AAATCCGAGAAATGGCTAGG+CGG | 0.692376 | 8.1:-74615114 | MS.gene94902:CDS |
| CAGAGAAAATCATACCGCGG+TGG | 0.698119 | 8.1:-74613269 | MS.gene94902:CDS |
| TTGAATGGAGCCATTCATGG+AGG | 0.701381 | 8.1:+74613724 | None:intergenic |
| GATTGCAAGGAATAGTTCTG+TGG | 0.720745 | 8.1:-74615575 | MS.gene94902:CDS |
| CACCAGAGAAAATCATACCG+CGG | 0.724445 | 8.1:-74613272 | MS.gene94902:CDS |
| TTGATGAATATAAAGCTCTG+GGG | 0.728057 | 8.1:+74616094 | None:intergenic |
| ACGGAAGGTCCTTTCCACCG+CGG | 0.760543 | 8.1:+74613255 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTGTATAATATAATTT+TGG | + | chr8.1:74615163-74615182 | None:intergenic | 10.0% |
| !!! | AATATTGGAAATATTGATTA+CGG | - | chr8.1:74615117-74615136 | MS.gene94902:CDS | 15.0% |
| !! | ATAATTAAGAAAATTAGAGC+TGG | - | chr8.1:74614808-74614827 | MS.gene94902:CDS | 20.0% |
| !! | CAATATTTCCAATATTTGAA+TGG | + | chr8.1:74615113-74615132 | None:intergenic | 20.0% |
| !! | TAAATATGAAATCAGATTCT+AGG | - | chr8.1:74614566-74614585 | MS.gene94902:CDS | 20.0% |
| !! | TTAAAAACAACAAATTTGGA+AGG | + | chr8.1:74614235-74614254 | None:intergenic | 20.0% |
| !! | TTTATCTAGGAATTCATTTA+GGG | + | chr8.1:74615607-74615626 | None:intergenic | 20.0% |
| !!! | AAAAAGTGTTTTTGTGAAAT+GGG | + | chr8.1:74612761-74612780 | None:intergenic | 20.0% |
| !!! | AAATGTTATGTTGACTAAAT+TGG | - | chr8.1:74613010-74613029 | MS.gene94902:CDS | 20.0% |
| !!! | AAGATTTTAATCAAAAGGAA+AGG | - | chr8.1:74614353-74614372 | MS.gene94902:CDS | 20.0% |
| !!! | AGATTTTAATCAAAAGGAAA+GGG | - | chr8.1:74614354-74614373 | MS.gene94902:CDS | 20.0% |
| !!! | ATGTATTAATTCGTTCATTT+TGG | - | chr8.1:74615335-74615354 | MS.gene94902:CDS | 20.0% |
| !!! | GCTCTAATTTTCTTAATTAT+AGG | + | chr8.1:74614808-74614827 | None:intergenic | 20.0% |
| !!! | TTATCTACTAGTTTTAATTG+TGG | - | chr8.1:74615386-74615405 | MS.gene94902:CDS | 20.0% |
| !!! | TTCCTAATTTGTTTAATTGT+TGG | + | chr8.1:74614535-74614554 | None:intergenic | 20.0% |
| !!! | TTGTCTTTCTTTTTTTATCT+AGG | + | chr8.1:74615620-74615639 | None:intergenic | 20.0% |
| !!! | TTTTATCTAGGAATTCATTT+AGG | + | chr8.1:74615608-74615627 | None:intergenic | 20.0% |
| ! | ACAAAGAAGAAGATTACTTA+TGG | - | chr8.1:74616093-74616112 | MS.gene94902:CDS | 25.0% |
| ! | AGCCAACAATTAAACAAATT+AGG | - | chr8.1:74614530-74614549 | MS.gene94902:CDS | 25.0% |
| ! | GTCGTTAAAAACAACAAATT+TGG | + | chr8.1:74614239-74614258 | None:intergenic | 25.0% |
| ! | GTTTGTGATAATAGAGAAAT+TGG | - | chr8.1:74613968-74613987 | MS.gene94902:CDS | 25.0% |
| ! | TAATAGAGAAATTGGTAAAG+AGG | - | chr8.1:74613976-74613995 | MS.gene94902:CDS | 25.0% |
| ! | TACTTCTTTCCTTTATCATA+AGG | - | chr8.1:74615276-74615295 | MS.gene94902:CDS | 25.0% |
| ! | TCTCGATAAACAGTAAAAAT+AGG | + | chr8.1:74613092-74613111 | None:intergenic | 25.0% |
| ! | TGAAGTTATTCATGAATCTA+CGG | - | chr8.1:74613526-74613545 | MS.gene94902:intron | 25.0% |
| ! | TTTGATGAATATAAAGCTCT+GGG | + | chr8.1:74612729-74612748 | None:intergenic | 25.0% |
| !! | AAATGGGTATGAAATAGTTT+TGG | + | chr8.1:74612697-74612716 | None:intergenic | 25.0% |
| !! | AATGGGTATGAAATAGTTTT+GGG | + | chr8.1:74612696-74612715 | None:intergenic | 25.0% |
| !! | AGTAGAAAGAAAAGATTTTC+TGG | - | chr8.1:74614739-74614758 | MS.gene94902:CDS | 25.0% |
| !! | CTACAAAAATCTGAACTTTT+GGG | - | chr8.1:74612984-74613003 | MS.gene94902:CDS | 25.0% |
| !! | GAACAATATTCTAAAAGCTA+AGG | - | chr8.1:74613601-74613620 | MS.gene94902:intron | 25.0% |
| !! | TGAAATTGAGGATAAGATTT+TGG | - | chr8.1:74613178-74613197 | MS.gene94902:CDS | 25.0% |
| !! | TTTCTGGAAAAACAGAAAAT+TGG | - | chr8.1:74614755-74614774 | MS.gene94902:CDS | 25.0% |
| !!! | AAAAGTGTTTTTGTGAAATG+GGG | + | chr8.1:74612760-74612779 | None:intergenic | 25.0% |
| !!! | ATAAGGAAGATGTTGATTTT+TGG | - | chr8.1:74613051-74613070 | MS.gene94902:CDS | 25.0% |
| !!! | CAGTGAAGATTTTAATCAAA+AGG | - | chr8.1:74614348-74614367 | MS.gene94902:CDS | 25.0% |
| !!! | CTTTTGATTAAAATCTTCAC+TGG | + | chr8.1:74614350-74614369 | None:intergenic | 25.0% |
| !!! | GAAAAAGTGTTTTTGTGAAA+TGG | + | chr8.1:74612762-74612781 | None:intergenic | 25.0% |
| !!! | TAAGGAAGATGTTGATTTTT+GGG | - | chr8.1:74613052-74613071 | MS.gene94902:CDS | 25.0% |
| !!! | TGCACAATATTTTTTTCTAG+AGG | - | chr8.1:74615419-74615438 | MS.gene94902:CDS | 25.0% |
| AACATACATACCAGAACATA+TGG | + | chr8.1:74616131-74616150 | None:intergenic | 30.0% | |
| AAGAAGAAGATTACTTATGG+TGG | - | chr8.1:74616096-74616115 | MS.gene94902:CDS | 30.0% | |
| ACTGTTTATCGAGATTCATT+TGG | - | chr8.1:74613098-74613117 | MS.gene94902:CDS | 30.0% | |
| AGTTAGTAAGGATATGGAAA+TGG | - | chr8.1:74613760-74613779 | MS.gene94902:CDS | 30.0% | |
| CAACAAACTTAAAAGAGAGA+TGG | - | chr8.1:74616019-74616038 | MS.gene94902:CDS | 30.0% | |
| CATTACTAGAAACAGAAGAA+GGG | + | chr8.1:74612920-74612939 | None:intergenic | 30.0% | |
| GAAGAAAATTATGATGAGGA+AGG | - | chr8.1:74613460-74613479 | MS.gene94902:intron | 30.0% | |
| GAATGTGAATTATACTTACC+TGG | + | chr8.1:74612890-74612909 | None:intergenic | 30.0% | |
| GATAAAGATGCTTTCTTCAA+AGG | - | chr8.1:74615030-74615049 | MS.gene94902:CDS | 30.0% | |
| GCTAAAAGACCTTATGATAA+AGG | + | chr8.1:74615288-74615307 | None:intergenic | 30.0% | |
| GGCAAAACAACAGATAATAA+TGG | - | chr8.1:74613881-74613900 | MS.gene94902:CDS | 30.0% | |
| GTAACAATCCAAAAATTCCT+GGG | + | chr8.1:74615850-74615869 | None:intergenic | 30.0% | |
| GTCATAAATGAGCCATTAAT+AGG | + | chr8.1:74614067-74614086 | None:intergenic | 30.0% | |
| GTTGACTAAATTGGAGAATT+GGG | - | chr8.1:74613019-74613038 | MS.gene94902:CDS | 30.0% | |
| GTTTGATGAATATAAAGCTC+TGG | + | chr8.1:74612730-74612749 | None:intergenic | 30.0% | |
| TAAGTTTATTGTTCAAGGTG+AGG | - | chr8.1:74613268-74613287 | MS.gene94902:CDS | 30.0% | |
| TAATTATAGGCTCAACTTCA+TGG | + | chr8.1:74614795-74614814 | None:intergenic | 30.0% | |
| TACTATCACCATTAACTTCA+TGG | + | chr8.1:74614723-74614742 | None:intergenic | 30.0% | |
| TATTTACTAACTACTGCTTG+CGG | + | chr8.1:74616056-74616075 | None:intergenic | 30.0% | |
| TCATATATACTAATGCCATC+TGG | + | chr8.1:74615525-74615544 | None:intergenic | 30.0% | |
| TCGTCGTTCATCAAATAAAA+TGG | + | chr8.1:74615009-74615028 | None:intergenic | 30.0% | |
| TCTAGAGGATACTTATGTTT+AGG | - | chr8.1:74615434-74615453 | MS.gene94902:CDS | 30.0% | |
| TGATTCATCTTCAAAAGTGA+AGG | - | chr8.1:74615701-74615720 | MS.gene94902:CDS | 30.0% | |
| TGGAGAAGAAAATTATGATG+AGG | - | chr8.1:74613456-74613475 | MS.gene94902:intron | 30.0% | |
| TGTAACAATCCAAAAATTCC+TGG | + | chr8.1:74615851-74615870 | None:intergenic | 30.0% | |
| TTCAAGAAAGTTTCGAACTT+TGG | - | chr8.1:74612803-74612822 | MS.gene94902:CDS | 30.0% | |
| TTCTCTAGTTAGTAAGGATA+TGG | - | chr8.1:74613754-74613773 | MS.gene94902:CDS | 30.0% | |
| TTGATGAATATAAAGCTCTG+GGG | + | chr8.1:74612728-74612747 | None:intergenic | 30.0% | |
| TTTAGATATACCAACTGAGA+TGG | - | chr8.1:74614876-74614895 | MS.gene94902:CDS | 30.0% | |
| ! | AATTGAGGATAAGATTTTGG+AGG | - | chr8.1:74613181-74613200 | MS.gene94902:CDS | 30.0% |
| ! | ATCAATGGATATGGACTATA+AGG | - | chr8.1:74613676-74613695 | MS.gene94902:intron | 30.0% |
| ! | ATCTCAGTTGGTATATCTAA+AGG | + | chr8.1:74614877-74614896 | None:intergenic | 30.0% |
| ! | GCTACAAAAATCTGAACTTT+TGG | - | chr8.1:74612983-74613002 | MS.gene94902:CDS | 30.0% |
| ! | TGTTGACTAAATTGGAGAAT+TGG | - | chr8.1:74613018-74613037 | MS.gene94902:CDS | 30.0% |
| !! | ATGGGTATGAAATAGTTTTG+GGG | + | chr8.1:74612695-74612714 | None:intergenic | 30.0% |
| !! | ATTCATTTGGTGCTGTTAAA+AGG | - | chr8.1:74613111-74613130 | MS.gene94902:CDS | 30.0% |
| !! | GAATTGGGTTGATAAGTATA+AGG | - | chr8.1:74613034-74613053 | MS.gene94902:CDS | 30.0% |
| !! | GATGAGATTTTGAAAAGAGT+TGG | - | chr8.1:74613149-74613168 | MS.gene94902:CDS | 30.0% |
| !! | TGTGTTTTTGTTGCTATGTT+TGG | - | chr8.1:74613383-74613402 | MS.gene94902:intron | 30.0% |
| !! | TTCATTTGGTGCTGTTAAAA+GGG | - | chr8.1:74613112-74613131 | MS.gene94902:CDS | 30.0% |
| !!! | AAGGAAGATGTTGATTTTTG+GGG | - | chr8.1:74613053-74613072 | MS.gene94902:CDS | 30.0% |
| !!! | ATGTTGATTTTTGGGGTATT+GGG | - | chr8.1:74613060-74613079 | MS.gene94902:CDS | 30.0% |
| !!! | CTTGTTGTTCATAGTTCTTT+TGG | - | chr8.1:74613638-74613657 | MS.gene94902:intron | 30.0% |
| !!! | GGATTTTTTGACTTCTTCAT+CGG | + | chr8.1:74615741-74615760 | None:intergenic | 30.0% |
| !!! | TGATGGTAGTTTTGTTGAAT+TGG | - | chr8.1:74612956-74612975 | MS.gene94902:CDS | 30.0% |
| AAAAGAGAGATGGAGTTGTT+TGG | - | chr8.1:74616029-74616048 | MS.gene94902:CDS | 35.0% | |
| AAATGGATGACAGTGTGATT+GGG | - | chr8.1:74613777-74613796 | MS.gene94902:CDS | 35.0% | |
| AAATTCAGCCCAACAAAGAT+TGG | - | chr8.1:74614631-74614650 | MS.gene94902:CDS | 35.0% | |
| AACCTTCAAAATGAAGTTGC+AGG | - | chr8.1:74613860-74613879 | MS.gene94902:CDS | 35.0% | |
| AAGTCCGTAATGAAGGATAT+CGG | - | chr8.1:74615894-74615913 | MS.gene94902:intron | 35.0% | |
| AATGAGTGCTTGAAAGATTC+TGG | - | chr8.1:74614394-74614413 | MS.gene94902:CDS | 35.0% | |
| ACAAGAAACCAAGGATCATA+CGG | - | chr8.1:74614104-74614123 | MS.gene94902:CDS | 35.0% | |
| ACTTCAGACCATGAAGTTAA+TGG | - | chr8.1:74614712-74614731 | MS.gene94902:CDS | 35.0% | |
| AGAAATCAGGGAAGGAATAT+TGG | - | chr8.1:74615805-74615824 | MS.gene94902:CDS | 35.0% | |
| AGAAGTTAAGTCCGTAATGA+AGG | - | chr8.1:74615887-74615906 | MS.gene94902:intron | 35.0% | |
| ATTAACTTCATGGTCTGAAG+TGG | + | chr8.1:74614713-74614732 | None:intergenic | 35.0% | |
| CAGAATCTTCACTAGGATTT+AGG | + | chr8.1:74614597-74614616 | None:intergenic | 35.0% | |
| CCATTACTAGAAACAGAAGA+AGG | + | chr8.1:74612921-74612940 | None:intergenic | 35.0% | |
| GAAAATCCTGATGCAAAATC+TGG | - | chr8.1:74614172-74614191 | MS.gene94902:CDS | 35.0% | |
| GAATGGCTCCATTCAAATAT+TGG | - | chr8.1:74615102-74615121 | MS.gene94902:CDS | 35.0% | |
| GAGAATAGCAAACAAGATGA+CGG | - | chr8.1:74613830-74613849 | MS.gene94902:CDS | 35.0% | |
| GAGATGGAATCAATTGAAGT+TGG | - | chr8.1:74614892-74614911 | MS.gene94902:CDS | 35.0% | |
| GATCACGGAAAAAGAAATAG+AGG | - | chr8.1:74615935-74615954 | MS.gene94902:intron | 35.0% | |
| GGTTATAGGTGTAAAAAAGC+CGG | - | chr8.1:74613556-74613575 | MS.gene94902:intron | 35.0% | |
| GTGGCTAAGTTTATTGTTCA+AGG | - | chr8.1:74613263-74613282 | MS.gene94902:CDS | 35.0% | |
| GTTAGATCTTCCATATGTTC+TGG | - | chr8.1:74616118-74616137 | MS.gene94902:CDS | 35.0% | |
| TAGTGAAGATTCTGATCAGA+AGG | - | chr8.1:74614603-74614622 | MS.gene94902:CDS | 35.0% | |
| TATATACTAATGCCATCTGG+AGG | + | chr8.1:74615522-74615541 | None:intergenic | 35.0% | |
| TATGACTTCACTCTCATTAG+AGG | + | chr8.1:74613807-74613826 | None:intergenic | 35.0% | |
| TATTTGAATGGAGCCATTCA+TGG | + | chr8.1:74615101-74615120 | None:intergenic | 35.0% | |
| TCAAGCACTCATTCTTTGTT+GGG | + | chr8.1:74614387-74614406 | None:intergenic | 35.0% | |
| TCATTACGGACTTAACTTCT+GGG | + | chr8.1:74615887-74615906 | None:intergenic | 35.0% | |
| TCCAGAAGTGACACATTAAA+TGG | - | chr8.1:74614295-74614314 | MS.gene94902:CDS | 35.0% | |
| TCTTCAAAAGTGAAGGTTGA+TGG | - | chr8.1:74615708-74615727 | MS.gene94902:CDS | 35.0% | |
| TGATGTCACCAATCTTTGTT+GGG | + | chr8.1:74614642-74614661 | None:intergenic | 35.0% | |
| TGGAAAAACAGAAAATTGGC+TGG | - | chr8.1:74614759-74614778 | MS.gene94902:CDS | 35.0% | |
| TTAAAGCTGGCAAGAAATCA+GGG | - | chr8.1:74615793-74615812 | MS.gene94902:CDS | 35.0% | |
| TTATTGTCTTCTCTGTCCTT+CGG | + | chr8.1:74614031-74614050 | None:intergenic | 35.0% | |
| TTCAAGCACTCATTCTTTGT+TGG | + | chr8.1:74614388-74614407 | None:intergenic | 35.0% | |
| TTCATTACGGACTTAACTTC+TGG | + | chr8.1:74615888-74615907 | None:intergenic | 35.0% | |
| TTCTGATCAGAATCTTCACT+AGG | + | chr8.1:74614604-74614623 | None:intergenic | 35.0% | |
| TTGATGTCACCAATCTTTGT+TGG | + | chr8.1:74614643-74614662 | None:intergenic | 35.0% | |
| ! | ATCTTCACTGGCATTTTTGT+CGG | + | chr8.1:74614338-74614357 | None:intergenic | 35.0% |
| ! | ATTGGTGACATCAAAAACTC+TGG | - | chr8.1:74614649-74614668 | MS.gene94902:CDS | 35.0% |
| ! | GAGAAAGAGATGTTGATGAA+GGG | - | chr8.1:74613497-74613516 | MS.gene94902:intron | 35.0% |
| ! | GGTGTTGAAGAAATTGATGA+TGG | - | chr8.1:74612939-74612958 | MS.gene94902:CDS | 35.0% |
| ! | GTTCGTGATAATGAATTGTG+TGG | - | chr8.1:74614976-74614995 | MS.gene94902:CDS | 35.0% |
| ! | TCAATTGATTCCATCTCAGT+TGG | + | chr8.1:74614889-74614908 | None:intergenic | 35.0% |
| ! | TCTCCAAATTTTTCTGCTTC+TGG | + | chr8.1:74614261-74614280 | None:intergenic | 35.0% |
| !! | AGTTGGTGGAAATGAAATTG+AGG | - | chr8.1:74613166-74613185 | MS.gene94902:CDS | 35.0% |
| !! | CCTTCTTCTGTTTCTAGTAA+TGG | - | chr8.1:74612918-74612937 | MS.gene94902:CDS | 35.0% |
| !! | GAGATTTTGAAAAGAGTTGG+TGG | - | chr8.1:74613152-74613171 | MS.gene94902:CDS | 35.0% |
| !! | TCAATTGAAGTTGGTGAAGA+TGG | - | chr8.1:74614901-74614920 | MS.gene94902:CDS | 35.0% |
| !! | TCCATTTAATGTGTCACTTC+TGG | + | chr8.1:74614299-74614318 | None:intergenic | 35.0% |
| !! | TTTTGTGAAATGGGGTGTTA+CGG | + | chr8.1:74612752-74612771 | None:intergenic | 35.0% |
| !!! | GATGTTGATTTTTGGGGTAT+TGG | - | chr8.1:74613059-74613078 | MS.gene94902:CDS | 35.0% |
| !!! | GGCTTTTTTACACCTATAAC+CGG | + | chr8.1:74613557-74613576 | None:intergenic | 35.0% |
| !!! | GTTGTTTCGTTTTGGAGATA+AGG | - | chr8.1:74613415-74613434 | MS.gene94902:intron | 35.0% |
| !!! | TGGGTATGAAATAGTTTTGG+GGG | + | chr8.1:74612694-74612713 | None:intergenic | 35.0% |
| AAAAAAGCCGGAGTTGGATA+AGG | - | chr8.1:74613568-74613587 | MS.gene94902:intron | 40.0% | |
| AAATTTGAACCCAGCGAAGA+AGG | - | chr8.1:74615650-74615669 | MS.gene94902:CDS | 40.0% | |
| AACCAAAGCCATTAACCTGA+CGG | + | chr8.1:74614468-74614487 | None:intergenic | 40.0% | |
| AACTTTCTCACCTCCATGAA+TGG | - | chr8.1:74615085-74615104 | MS.gene94902:CDS | 40.0% | |
| AAGGATCATACGGTCTGTTA+AGG | - | chr8.1:74614114-74614133 | MS.gene94902:CDS | 40.0% | |
| AATCCAAAGACTGTTGTCGA+AGG | - | chr8.1:74615756-74615775 | MS.gene94902:CDS | 40.0% | |
| AATGCCATCTGGAGGAATAA+AGG | + | chr8.1:74615514-74615533 | None:intergenic | 40.0% | |
| AGAAACAGAAGAAGGGTCAT+TGG | + | chr8.1:74612913-74612932 | None:intergenic | 40.0% | |
| AGTCCGTAATGAAGGATATC+GGG | - | chr8.1:74615895-74615914 | MS.gene94902:intron | 40.0% | |
| ATTAACCTGACGGTCTAAAG+CGG | + | chr8.1:74614458-74614477 | None:intergenic | 40.0% | |
| ATTGGCAGCACACAAAGAAA+TGG | - | chr8.1:74615823-74615842 | MS.gene94902:CDS | 40.0% | |
| CACGGAAAAAGAAATAGAGG+AGG | - | chr8.1:74615938-74615957 | MS.gene94902:intron | 40.0% | |
| CGACCAGAAGCAGAAAAATT+TGG | - | chr8.1:74614255-74614274 | MS.gene94902:CDS | 40.0% | |
| CTTCCCGATATCCTTCATTA+CGG | + | chr8.1:74615901-74615920 | None:intergenic | 40.0% | |
| GAAACAGAAGAAGGGTCATT+GGG | + | chr8.1:74612912-74612931 | None:intergenic | 40.0% | |
| GAAATGGATGACAGTGTGAT+TGG | - | chr8.1:74613776-74613795 | MS.gene94902:CDS | 40.0% | |
| GAGAACTGGATCAATGGATA+TGG | - | chr8.1:74613667-74613686 | MS.gene94902:intron | 40.0% | |
| GCTTGTTCCTTAGTGAATTG+CGG | + | chr8.1:74612854-74612873 | None:intergenic | 40.0% | |
| GGATCGTTCTCTAGTTAGTA+AGG | - | chr8.1:74613748-74613767 | MS.gene94902:CDS | 40.0% | |
| GTGCTTGAAAGATTCTGGTA+CGG | - | chr8.1:74614399-74614418 | MS.gene94902:CDS | 40.0% | |
| GTGGTGAAAATGTGATTGCA+AGG | - | chr8.1:74613231-74613250 | MS.gene94902:CDS | 40.0% | |
| GTTAAAGCTGGCAAGAAATC+AGG | - | chr8.1:74615792-74615811 | MS.gene94902:CDS | 40.0% | |
| GTTCAGTGAACAAGAAACCA+AGG | - | chr8.1:74614095-74614114 | MS.gene94902:CDS | 40.0% | |
| GTTTATTGTTCAAGGTGAGG+AGG | - | chr8.1:74613271-74613290 | MS.gene94902:CDS | 40.0% | |
| TCCTCACGTACTCCTATTAA+TGG | - | chr8.1:74614052-74614071 | MS.gene94902:CDS | 40.0% | |
| TCTTCACTAGGATTTAGGTC+AGG | + | chr8.1:74614592-74614611 | None:intergenic | 40.0% | |
| TGAACTTGGGAAAGAAAGCA+TGG | - | chr8.1:74614198-74614217 | MS.gene94902:CDS | 40.0% | |
| TGATCTGATGAGCAAGTTAC+CGG | - | chr8.1:74615965-74615984 | MS.gene94902:CDS | 40.0% | |
| TTAACAGACCGTATGATCCT+TGG | + | chr8.1:74614115-74614134 | None:intergenic | 40.0% | |
| TTCCAAAGCAAGTCTATCAG+AGG | - | chr8.1:74614486-74614505 | MS.gene94902:CDS | 40.0% | |
| TTGTCCTTTATTCCTCCAGA+TGG | - | chr8.1:74615507-74615526 | MS.gene94902:CDS | 40.0% | |
| ! | AAAAACTCTGGTGTTGAACC+TGG | - | chr8.1:74614661-74614680 | MS.gene94902:CDS | 40.0% |
| ! | AGTGATGGTTCTGTTAAAGC+TGG | - | chr8.1:74615780-74615799 | MS.gene94902:CDS | 40.0% |
| ! | CAAAATCTGGCGTTGAACTT+GGG | - | chr8.1:74614185-74614204 | MS.gene94902:CDS | 40.0% |
| ! | GAAATGGTCCCAGGAATTTT+TGG | - | chr8.1:74615839-74615858 | MS.gene94902:intron | 40.0% |
| ! | GATTGCAAGGAATAGTTCTG+TGG | - | chr8.1:74613244-74613263 | MS.gene94902:CDS | 40.0% |
| ! | GATTTTGTTAAGGCTGTTCG+TGG | - | chr8.1:74613302-74613321 | MS.gene94902:intron | 40.0% |
| ! | GGAAATATTGATTACGGAGC+AGG | - | chr8.1:74615123-74615142 | MS.gene94902:CDS | 40.0% |
| ! | GGAGAAAGAGATGTTGATGA+AGG | - | chr8.1:74613496-74613515 | MS.gene94902:intron | 40.0% |
| ! | GGAGAAGGGTGATTTTGTTA+AGG | - | chr8.1:74613292-74613311 | MS.gene94902:CDS | 40.0% |
| ! | TAGGAATTCATTTAGGGCCT+CGG | + | chr8.1:74615601-74615620 | None:intergenic | 40.0% |
| ! | TCTTCACTGGCATTTTTGTC+GGG | + | chr8.1:74614337-74614356 | None:intergenic | 40.0% |
| ! | TGCCTGCAACTTCATTTTGA+AGG | + | chr8.1:74613865-74613884 | None:intergenic | 40.0% |
| !! | ATTGAAGTTGGTGAAGATGG+TGG | - | chr8.1:74614904-74614923 | MS.gene94902:CDS | 40.0% |
| !! | GTGACGAAGTTGTTTCGTTT+TGG | - | chr8.1:74613407-74613426 | MS.gene94902:intron | 40.0% |
| !! | TTTTGAAGATTTGCCACTCC+AGG | + | chr8.1:74614682-74614701 | None:intergenic | 40.0% |
| !! | TTTTGAAGGTCTTCCAATCC+AGG | + | chr8.1:74614427-74614446 | None:intergenic | 40.0% |
| !!! | GGGTATGAAATAGTTTTGGG+GGG | + | chr8.1:74612693-74612712 | None:intergenic | 40.0% |
| !!! | GTTTCGTTTTGGAGATAAGG+AGG | - | chr8.1:74613418-74613437 | MS.gene94902:intron | 40.0% |
| !!! | GTTTTGGAGATAAGGAGGTT+CGG | - | chr8.1:74613423-74613442 | MS.gene94902:intron | 40.0% |
| AAAATCATACCGCGGTGGAA+AGG | - | chr8.1:74615555-74615574 | MS.gene94902:CDS | 45.0% | |
| AAAGATTCTGGTACGGAACC+TGG | - | chr8.1:74614406-74614425 | MS.gene94902:CDS | 45.0% | |
| AAATCCGAGAAATGGCTAGG+CGG | - | chr8.1:74613705-74613724 | MS.gene94902:CDS | 45.0% | |
| ACGAAACTCCTATTCCTCTC+CGG | + | chr8.1:74615987-74616006 | None:intergenic | 45.0% | |
| ACGGTCTGTTAAGGAAGCTA+AGG | - | chr8.1:74614123-74614142 | MS.gene94902:CDS | 45.0% | |
| ACTGTTGTCGAAGGAAGTGA+TGG | - | chr8.1:74615765-74615784 | MS.gene94902:CDS | 45.0% | |
| AGCTGTTCCTTATCCAACTC+CGG | + | chr8.1:74613578-74613597 | None:intergenic | 45.0% | |
| AGGTGTAAAAAAGCCGGAGT+TGG | - | chr8.1:74613562-74613581 | MS.gene94902:intron | 45.0% | |
| CAAGCTTCTTCATGATCACC+AGG | - | chr8.1:74612869-74612888 | MS.gene94902:CDS | 45.0% | |
| CACCAGAGAAAATCATACCG+CGG | - | chr8.1:74615547-74615566 | MS.gene94902:CDS | 45.0% | |
| CGTAATGAAGGATATCGGGA+AGG | - | chr8.1:74615899-74615918 | MS.gene94902:intron | 45.0% | |
| CTTCCTTCGACAACAGTCTT+TGG | + | chr8.1:74615762-74615781 | None:intergenic | 45.0% | |
| CTTCGCTGGGTTCAAATTTC+TGG | + | chr8.1:74615649-74615668 | None:intergenic | 45.0% | |
| GAAGGATATCGGGAAGGATT+TGG | - | chr8.1:74615905-74615924 | MS.gene94902:intron | 45.0% | |
| GAGAAATCCGAGAAATGGCT+AGG | - | chr8.1:74613702-74613721 | MS.gene94902:CDS | 45.0% | |
| GGTTCGAGAAATCCGAGAAA+TGG | - | chr8.1:74613697-74613716 | MS.gene94902:CDS | 45.0% | |
| TAAGAAGCTAGCTAGGGAGA+TGG | - | chr8.1:74613205-74613224 | MS.gene94902:CDS | 45.0% | |
| TCATGAATCTACGGAGACAC+CGG | - | chr8.1:74613535-74613554 | MS.gene94902:intron | 45.0% | |
| TGAAGCGAGAACTGGATCAA+TGG | - | chr8.1:74613661-74613680 | MS.gene94902:intron | 45.0% | |
| TGATGAGGAAGGCAAAAGCT+AGG | - | chr8.1:74613471-74613490 | MS.gene94902:intron | 45.0% | |
| TGTTCCTTAGTGAATTGCGG+CGG | + | chr8.1:74612851-74612870 | None:intergenic | 45.0% | |
| TTGAATGGAGCCATTCATGG+AGG | + | chr8.1:74615098-74615117 | None:intergenic | 45.0% | |
| ! | AAGCGGTCTCAGACTTTTGA+AGG | + | chr8.1:74614441-74614460 | None:intergenic | 45.0% |
| ! | AGGAATTCATTTAGGGCCTC+GGG | + | chr8.1:74615600-74615619 | None:intergenic | 45.0% |
| ! | CTCCTCTGATAGACTTGCTT+TGG | + | chr8.1:74614491-74614510 | None:intergenic | 45.0% |
| ! | GCAAAATCTGGCGTTGAACT+TGG | - | chr8.1:74614184-74614203 | MS.gene94902:CDS | 45.0% |
| ! | GCCATTAATAGGAGTACGTG+AGG | + | chr8.1:74614056-74614075 | None:intergenic | 45.0% |
| ! | GCTTTAGACCGTCAGGTTAA+TGG | - | chr8.1:74614457-74614476 | MS.gene94902:CDS | 45.0% |
| ! | GGAGGTTCGGTATACTGAAA+TGG | - | chr8.1:74613436-74613455 | MS.gene94902:intron | 45.0% |
| ! | TCAACGCCAGATTTTGCATC+AGG | + | chr8.1:74614181-74614200 | None:intergenic | 45.0% |
| ! | TCTTTTGGTGAAGCGAGAAC+TGG | - | chr8.1:74613653-74613672 | MS.gene94902:intron | 45.0% |
| !! | AAGATGGTGGAGAACTTGAC+TGG | - | chr8.1:74614917-74614936 | MS.gene94902:CDS | 45.0% |
| !! | CTCTGGGGTTGCAGAAAAAT+GGG | + | chr8.1:74612713-74612732 | None:intergenic | 45.0% |
| AATCCGAGAAATGGCTAGGC+GGG | - | chr8.1:74613706-74613725 | MS.gene94902:CDS | 50.0% | |
| AGCTGGCAAGAAATCAGGGA+AGG | - | chr8.1:74615797-74615816 | MS.gene94902:CDS | 50.0% | |
| AGTGAATTGCGGCGGTTAGT+GGG | + | chr8.1:74612843-74612862 | None:intergenic | 50.0% | |
| ATTTGTCGTGCAACCGGGAT+TGG | - | chr8.1:74613325-74613344 | MS.gene94902:intron | 50.0% | |
| CAGAGAAAATCATACCGCGG+TGG | - | chr8.1:74615550-74615569 | MS.gene94902:CDS | 50.0% | |
| CGATGTTGCTATGACTCCGA+AGG | - | chr8.1:74614012-74614031 | MS.gene94902:CDS | 50.0% | |
| CTAACCGCCGCAATTCACTA+AGG | - | chr8.1:74612844-74612863 | MS.gene94902:CDS | 50.0% | |
| GAAAGCTTCGGAACCAATCC+CGG | + | chr8.1:74613341-74613360 | None:intergenic | 50.0% | |
| GACCGTCAGGTTAATGGCTT+TGG | - | chr8.1:74614463-74614482 | MS.gene94902:CDS | 50.0% | |
| GAGGAAGGCAAAAGCTAGGA+AGG | - | chr8.1:74613475-74613494 | MS.gene94902:intron | 50.0% | |
| GCAAGTTACCGGAGAGGAAT+AGG | - | chr8.1:74615976-74615995 | MS.gene94902:CDS | 50.0% | |
| GCACACAAAGAAATGGTCCC+AGG | - | chr8.1:74615830-74615849 | MS.gene94902:CDS | 50.0% | |
| GGAGAGGAATAGGAGTTTCG+TGG | - | chr8.1:74615986-74616005 | MS.gene94902:CDS | 50.0% | |
| GGAGGCTAAGAAGCTAGCTA+GGG | - | chr8.1:74613199-74613218 | MS.gene94902:CDS | 50.0% | |
| GGATTTGGATCGCTGGATCA+CGG | - | chr8.1:74615920-74615939 | MS.gene94902:intron | 50.0% | |
| GTTCAAGGTGAGGAGGAGAA+GGG | - | chr8.1:74613278-74613297 | MS.gene94902:CDS | 50.0% | |
| TAGTGAATTGCGGCGGTTAG+TGG | + | chr8.1:74612844-74612863 | None:intergenic | 50.0% | |
| TCGTGGATTTGTCGTGCAAC+CGG | - | chr8.1:74613319-74613338 | MS.gene94902:intron | 50.0% | |
| TGAACCCAGCGAAGAAGGAT+GGG | - | chr8.1:74615655-74615674 | MS.gene94902:CDS | 50.0% | |
| TGATGAGCAAGTTACCGGAG+AGG | - | chr8.1:74615970-74615989 | MS.gene94902:CDS | 50.0% | |
| TGGAGAACTTGACTGGATGC+AGG | - | chr8.1:74614924-74614943 | MS.gene94902:CDS | 50.0% | |
| TGGAGGCTAAGAAGCTAGCT+AGG | - | chr8.1:74613198-74613217 | MS.gene94902:CDS | 50.0% | |
| TGTTCAAGGTGAGGAGGAGA+AGG | - | chr8.1:74613277-74613296 | MS.gene94902:CDS | 50.0% | |
| TTCCGTGGAGAAAATTCCCG+AGG | - | chr8.1:74615581-74615600 | MS.gene94902:CDS | 50.0% | |
| TTCTGGTACGGAACCTGGAT+TGG | - | chr8.1:74614411-74614430 | MS.gene94902:CDS | 50.0% | |
| TTGAACCCAGCGAAGAAGGA+TGG | - | chr8.1:74615654-74615673 | MS.gene94902:CDS | 50.0% | |
| ! | ATTGGTTCCGAAGCTTTCGG+GGG | - | chr8.1:74613343-74613362 | MS.gene94902:intron | 50.0% |
| ! | CACCGCGGTATGATTTTCTC+TGG | + | chr8.1:74615552-74615571 | None:intergenic | 50.0% |
| ! | CGCTGGGTTCAAATTTCTGG+TGG | + | chr8.1:74615646-74615665 | None:intergenic | 50.0% |
| ! | GATTGGTTCCGAAGCTTTCG+GGG | - | chr8.1:74613342-74613361 | MS.gene94902:intron | 50.0% |
| ! | TCGGGAATTTTCTCCACGGA+AGG | + | chr8.1:74615582-74615601 | None:intergenic | 50.0% |
| ! | TCTACGGAGACACCGGTTAT+AGG | - | chr8.1:74613542-74613561 | MS.gene94902:intron | 50.0% |
| !! | GCTCTGGGGTTGCAGAAAAA+TGG | + | chr8.1:74612714-74612733 | None:intergenic | 50.0% |
| !! | GGATTGGTTCCGAAGCTTTC+GGG | - | chr8.1:74613341-74613360 | MS.gene94902:intron | 50.0% |
| !! | GGGATTGGTTCCGAAGCTTT+CGG | - | chr8.1:74613340-74613359 | MS.gene94902:intron | 50.0% |
| CCTTCCCATCCTTCTTCGCT+GGG | + | chr8.1:74615662-74615681 | None:intergenic | 55.0% | |
| CGTGGATTTGTCGTGCAACC+GGG | - | chr8.1:74613320-74613339 | MS.gene94902:intron | 55.0% | |
| CTAGCTAGGGAGATGGAGAG+TGG | - | chr8.1:74613212-74613231 | MS.gene94902:CDS | 55.0% | |
| GGCACGGGAAATTGAAGGTG+GGG | - | chr8.1:74613727-74613746 | MS.gene94902:CDS | 55.0% | |
| GGGCACGGGAAATTGAAGGT+GGG | - | chr8.1:74613726-74613745 | MS.gene94902:CDS | 55.0% | |
| TCCTTCCCATCCTTCTTCGC+TGG | + | chr8.1:74615663-74615682 | None:intergenic | 55.0% | |
| TCGGGAAGGATTTGGATCGC+TGG | - | chr8.1:74615913-74615932 | MS.gene94902:intron | 55.0% | |
| ! | CTCTGGTGTTGAACCTGGAG+TGG | - | chr8.1:74614666-74614685 | MS.gene94902:CDS | 55.0% |
| ! | GGCCTCGGGAATTTTCTCCA+CGG | + | chr8.1:74615586-74615605 | None:intergenic | 55.0% |
| ! | TGAGACCGCTTTAGACCGTC+AGG | - | chr8.1:74614450-74614469 | MS.gene94902:CDS | 55.0% |
| ACGGAAGGTCCTTTCCACCG+CGG | + | chr8.1:74615567-74615586 | None:intergenic | 60.0% | |
| AGAAATGGCTAGGCGGGCAC+GGG | - | chr8.1:74613712-74613731 | MS.gene94902:CDS | 60.0% | |
| AGGCGGGCACGGGAAATTGA+AGG | - | chr8.1:74613722-74613741 | MS.gene94902:CDS | 60.0% | |
| CCCAGCGAAGAAGGATGGGA+AGG | - | chr8.1:74615659-74615678 | MS.gene94902:CDS | 60.0% | |
| CGGGCACGGGAAATTGAAGG+TGG | - | chr8.1:74613725-74613744 | MS.gene94902:CDS | 60.0% | |
| GAGAAATGGCTAGGCGGGCA+CGG | - | chr8.1:74613711-74613730 | MS.gene94902:CDS | 60.0% | |
| GTGCCCGCCTAGCCATTTCT+CGG | + | chr8.1:74613712-74613731 | None:intergenic | 60.0% | |
| GTTCCGAAGCTTTCGGGGGT+TGG | - | chr8.1:74613347-74613366 | MS.gene94902:intron | 60.0% | |
| CCGAAGCTTTCGGGGGTTGG+CGG | - | chr8.1:74613350-74613369 | MS.gene94902:intron | 65.0% | |
| CCGCCAACCCCCGAAAGCTT+CGG | + | chr8.1:74613353-74613372 | None:intergenic | 65.0% | |
| GCGGTGGAAAGGACCTTCCG+TGG | - | chr8.1:74615566-74615585 | MS.gene94902:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 74612669 | 74616172 | 74612669 | ID=MS.gene94902 |
| chr8.1 | mRNA | 74612669 | 74616172 | 74612669 | ID=MS.gene94902.t1;Parent=MS.gene94902 |
| chr8.1 | exon | 74615951 | 74616172 | 74615951 | ID=MS.gene94902.t1.exon1;Parent=MS.gene94902.t1 |
| chr8.1 | CDS | 74615951 | 74616172 | 74615951 | ID=cds.MS.gene94902.t1;Parent=MS.gene94902.t1 |
| chr8.1 | exon | 74613697 | 74615857 | 74613697 | ID=MS.gene94902.t1.exon2;Parent=MS.gene94902.t1 |
| chr8.1 | CDS | 74613697 | 74615857 | 74613697 | ID=cds.MS.gene94902.t1;Parent=MS.gene94902.t1 |
| chr8.1 | exon | 74612669 | 74613315 | 74612669 | ID=MS.gene94902.t1.exon3;Parent=MS.gene94902.t1 |
| chr8.1 | CDS | 74612669 | 74613315 | 74612669 | ID=cds.MS.gene94902.t1;Parent=MS.gene94902.t1 |
| Gene Sequence |
| Protein sequence |
