Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95152.t1 | XP_003610508.1 | 84.1 | 308 | 36 | 4 | 1 | 298 | 1 | 305 | 4.30E-136 | 494.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95152.t1 | G7JKH8 | 84.1 | 308 | 36 | 4 | 1 | 298 | 1 | 305 | 3.1e-136 | 494.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057622 | MS.gene95152 | 0.815974 | 7.02E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95152.t1 | MTR_4g132970 | 86.688 | 308 | 28 | 4 | 1 | 298 | 1 | 305 | 2.25e-180 | 499 |
MS.gene95152.t1 | MTR_4g132963 | 82.373 | 295 | 40 | 6 | 5 | 298 | 1 | 284 | 1.06e-171 | 476 |
MS.gene95152.t1 | MTR_4g132940 | 82.373 | 295 | 40 | 6 | 5 | 298 | 1 | 284 | 1.06e-171 | 476 |
MS.gene95152.t1 | MTR_2g025520 | 56.250 | 320 | 104 | 11 | 9 | 298 | 4 | 317 | 1.20e-110 | 323 |
MS.gene95152.t1 | MTR_8g012240 | 37.238 | 239 | 130 | 7 | 34 | 258 | 34 | 266 | 7.08e-40 | 141 |
MS.gene95152.t1 | MTR_1g041155 | 34.348 | 230 | 122 | 6 | 48 | 259 | 64 | 282 | 1.00e-35 | 132 |
MS.gene95152.t1 | MTR_7g053310 | 34.335 | 233 | 130 | 7 | 48 | 272 | 43 | 260 | 1.42e-33 | 124 |
MS.gene95152.t1 | MTR_1g070970 | 41.606 | 137 | 80 | 0 | 128 | 264 | 166 | 302 | 2.86e-33 | 125 |
MS.gene95152.t1 | MTR_1g076500 | 41.667 | 132 | 71 | 1 | 124 | 249 | 163 | 294 | 1.00e-32 | 124 |
MS.gene95152.t1 | MTR_5g008720 | 32.843 | 204 | 113 | 5 | 86 | 270 | 45 | 243 | 3.15e-32 | 120 |
MS.gene95152.t1 | MTR_2g013780 | 35.465 | 172 | 90 | 2 | 106 | 256 | 104 | 275 | 5.45e-32 | 121 |
MS.gene95152.t1 | MTR_7g095960 | 43.200 | 125 | 71 | 0 | 131 | 255 | 161 | 285 | 1.09e-31 | 121 |
MS.gene95152.t1 | MTR_8g093440 | 33.149 | 181 | 112 | 2 | 92 | 265 | 46 | 224 | 2.39e-31 | 118 |
MS.gene95152.t1 | MTR_8g093440 | 36.424 | 151 | 88 | 2 | 122 | 265 | 13 | 162 | 5.46e-31 | 115 |
MS.gene95152.t1 | MTR_7g083080 | 34.146 | 246 | 141 | 9 | 26 | 256 | 23 | 262 | 6.49e-31 | 118 |
MS.gene95152.t1 | MTR_4g088770 | 33.721 | 172 | 104 | 3 | 106 | 269 | 123 | 292 | 2.38e-30 | 117 |
MS.gene95152.t1 | MTR_4g088760 | 36.129 | 155 | 90 | 3 | 122 | 269 | 193 | 345 | 3.60e-30 | 117 |
MS.gene95152.t1 | MTR_4g078310 | 32.584 | 178 | 103 | 4 | 86 | 247 | 67 | 243 | 7.24e-29 | 112 |
MS.gene95152.t1 | MTR_2g013880 | 28.017 | 232 | 138 | 4 | 47 | 253 | 45 | 272 | 8.39e-28 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95152.t1 | AT1G62420 | 44.337 | 309 | 127 | 13 | 1 | 296 | 1 | 277 | 1.96e-62 | 199 |
MS.gene95152.t1 | AT1G12030 | 46.715 | 274 | 121 | 10 | 34 | 297 | 29 | 287 | 1.29e-61 | 197 |
MS.gene95152.t1 | AT3G07350 | 32.867 | 286 | 171 | 7 | 22 | 288 | 14 | 297 | 1.40e-40 | 143 |
MS.gene95152.t1 | AT4G14620 | 33.188 | 229 | 135 | 4 | 35 | 257 | 54 | 270 | 1.41e-39 | 141 |
MS.gene95152.t1 | AT3G25240 | 38.919 | 185 | 94 | 3 | 102 | 267 | 85 | 269 | 4.28e-36 | 131 |
MS.gene95152.t1 | AT2G38820 | 43.750 | 112 | 63 | 0 | 142 | 253 | 171 | 282 | 9.30e-35 | 128 |
MS.gene95152.t1 | AT4G32480 | 33.171 | 205 | 112 | 5 | 69 | 255 | 50 | 247 | 1.53e-33 | 124 |
MS.gene95152.t1 | AT3G22970 | 31.915 | 235 | 142 | 5 | 32 | 255 | 66 | 293 | 3.14e-32 | 122 |
MS.gene95152.t1 | AT3G22970 | 40.476 | 126 | 75 | 0 | 130 | 255 | 57 | 182 | 6.08e-32 | 119 |
MS.gene95152.t1 | AT3G54550 | 43.590 | 117 | 62 | 1 | 142 | 254 | 156 | 272 | 5.21e-31 | 117 |
MS.gene95152.t1 | AT2G20670 | 37.600 | 125 | 72 | 2 | 142 | 260 | 130 | 254 | 2.27e-25 | 102 |
MS.gene95152.t1 | AT2G39650 | 33.103 | 145 | 91 | 1 | 120 | 258 | 38 | 182 | 6.30e-25 | 100 |
MS.gene95152.t1 | AT2G39650 | 33.103 | 145 | 91 | 1 | 120 | 258 | 100 | 244 | 1.08e-24 | 100 |
MS.gene95152.t1 | AT1G77145 | 39.130 | 138 | 66 | 3 | 134 | 253 | 79 | 216 | 6.19e-23 | 95.5 |
MS.gene95152.t1 | AT1G77160 | 34.337 | 166 | 91 | 3 | 106 | 253 | 1 | 166 | 3.02e-21 | 89.7 |
MS.gene95152.t1 | AT1G77160 | 34.337 | 166 | 91 | 3 | 106 | 253 | 56 | 221 | 5.43e-21 | 90.5 |
MS.gene95152.t1 | AT1G77145 | 39.423 | 104 | 53 | 1 | 160 | 253 | 56 | 159 | 1.03e-17 | 80.1 |
Find 63 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACAATCTCAGGGATAATTT+TGG | 0.188513 | 8.2:+1360402 | MS.gene95152:CDS |
AAATCATCAGTTAAACTTTC+AGG | 0.239669 | 8.2:-1359435 | None:intergenic |
GATAATGTGCAGTGCTATTA+AGG | 0.247598 | 8.2:+1360233 | MS.gene95152:CDS |
GGAACAATGTTTGAAATTAT+AGG | 0.274698 | 8.2:+1359309 | None:intergenic |
CATAATCATGTCACGCTTGC+GGG | 0.278629 | 8.2:+1359710 | MS.gene95152:CDS |
CATTAGTTGTTCTCTTATAC+TGG | 0.297305 | 8.2:-1360329 | None:intergenic |
AAAGAAGTGTATTGATTTGT+AGG | 0.304916 | 8.2:-1360150 | None:intergenic |
AGAAAGTCCATTGGATTTGA+TGG | 0.339951 | 8.2:+1360363 | MS.gene95152:CDS |
CATTGTTGAAACATCCCTTA+TGG | 0.343346 | 8.2:+1360107 | MS.gene95152:CDS |
CCTGAGATTGTATGCTTTCA+AGG | 0.359331 | 8.2:-1360391 | None:intergenic |
AATTCTGTGAGAGCAGTATT+AGG | 0.375491 | 8.2:+1359489 | MS.gene95152:CDS |
GAGTACATTGATGTGAATTA+TGG | 0.404322 | 8.2:+1360072 | MS.gene95152:CDS |
CCTTGAAAGCATACAATCTC+AGG | 0.405320 | 8.2:+1360391 | MS.gene95152:CDS |
CGTTAAATGCAGCAGTCAAC+TGG | 0.410653 | 8.2:-1360449 | None:intergenic |
AATTATAGGAAGTGTTATTC+CGG | 0.414157 | 8.2:+1359323 | MS.gene95152:CDS |
AGATCTTGTGAAATCGTTCA+TGG | 0.414693 | 8.2:+1359461 | MS.gene95152:CDS |
GTAAAGTTGAAGAGCTGAAA+AGG | 0.427347 | 8.2:+1360202 | MS.gene95152:CDS |
CTATTTCGAATTCTGCCATA+AGG | 0.447867 | 8.2:-1360122 | None:intergenic |
GGTGGTGATAAGTCTTCGTC+TGG | 0.459599 | 8.2:+1359678 | MS.gene95152:CDS |
AAAGCAGTGGAAGCGAGCAC+TGG | 0.461367 | 8.2:+1359412 | MS.gene95152:CDS |
ACTTTACCAACAAATACTAA+AGG | 0.462980 | 8.2:-1360186 | None:intergenic |
CTTTACCAACAAATACTAAA+GGG | 0.468349 | 8.2:-1360185 | None:intergenic |
GAAAGAGAAGATTAGAAGAG+AGG | 0.483731 | 8.2:+1359632 | MS.gene95152:CDS |
ATGTAGCTATTTCTTCTCCA+TGG | 0.487255 | 8.2:-1360288 | None:intergenic |
TATTTCGAATTCTGCCATAA+GGG | 0.487390 | 8.2:-1360121 | None:intergenic |
AGTAAAATTGATGTTAGAGT+TGG | 0.492479 | 8.2:+1360426 | MS.gene95152:CDS |
GTATGATTATGAGGAGAAGA+AGG | 0.513246 | 8.2:+1359563 | MS.gene95152:CDS |
TAAAGTTGAAGAGCTGAAAA+GGG | 0.521956 | 8.2:+1360203 | MS.gene95152:CDS |
GCATAATCATGTCACGCTTG+CGG | 0.531893 | 8.2:+1359709 | MS.gene95152:CDS |
GAACTTGCCATTCAAGTCGT+TGG | 0.532138 | 8.2:+1359657 | MS.gene95152:CDS |
AGAAATAGAAAATTCCCATC+GGG | 0.533461 | 8.2:+1360042 | MS.gene95152:CDS |
ATCACCACCAACGACTTGAA+TGG | 0.535962 | 8.2:-1359664 | None:intergenic |
AGTAACGAGGCGGCGGCTCG+TGG | 0.543433 | 8.2:+1359378 | MS.gene95152:CDS |
CAGGGCTTTGCAAATCTAAG+TGG | 0.555631 | 8.2:+1360016 | MS.gene95152:intron |
CTGAGATTGTATGCTTTCAA+GGG | 0.558296 | 8.2:-1360390 | None:intergenic |
TACATTGATGTGAATTATGG+TGG | 0.560910 | 8.2:+1360075 | MS.gene95152:CDS |
TAAGGACTCTATGAAAACAA+TGG | 0.564737 | 8.2:+1360251 | MS.gene95152:CDS |
GTTGCAACAAGAAAGTCCAT+TGG | 0.572572 | 8.2:+1360354 | MS.gene95152:CDS |
AAGAAATAGAAAATTCCCAT+CGG | 0.581281 | 8.2:+1360041 | MS.gene95152:CDS |
GGGTCTTCCATCAAATCCAA+TGG | 0.585157 | 8.2:-1360370 | None:intergenic |
TTTACCTTCTCAATCCTCAC+CGG | 0.585662 | 8.2:-1359342 | None:intergenic |
GTAACGAGGCGGCGGCTCGT+GGG | 0.587184 | 8.2:+1359379 | MS.gene95152:CDS |
TGGATATGCATGTACCTCCA+TGG | 0.588780 | 8.2:+1360271 | MS.gene95152:CDS |
ATAGCTACATGCAAGCTAAG+TGG | 0.590588 | 8.2:+1360301 | MS.gene95152:CDS |
ACGAGGCGGCGGCTCGTGGG+AGG | 0.594621 | 8.2:+1359382 | MS.gene95152:CDS |
ATGTCACGCTTGCGGGAGAG+AGG | 0.595841 | 8.2:+1359717 | MS.gene95152:CDS |
GGTGAGGATTGAGAAGGTAA+AGG | 0.595964 | 8.2:+1359344 | MS.gene95152:CDS |
CTTGCCATTCAAGTCGTTGG+TGG | 0.598897 | 8.2:+1359660 | MS.gene95152:CDS |
GTTTGAGAGTAACGAGGCGG+CGG | 0.599979 | 8.2:+1359371 | MS.gene95152:CDS |
AAGAGCTGAAAAGGGTTGTG+AGG | 0.601387 | 8.2:+1360211 | MS.gene95152:CDS |
ATGTACTCATAGTCACCCGA+TGG | 0.622531 | 8.2:-1360057 | None:intergenic |
AGGGCTTTGCAAATCTAAGT+GGG | 0.632011 | 8.2:+1360017 | MS.gene95152:intron |
TAGGAAGTGTTATTCCGGTG+AGG | 0.632868 | 8.2:+1359328 | MS.gene95152:CDS |
GTATAAGAGAACAACTAATG+AGG | 0.635389 | 8.2:+1360332 | MS.gene95152:CDS |
CTTGAAAGCATACAATCTCA+GGG | 0.641796 | 8.2:+1360392 | MS.gene95152:CDS |
GGGAGGCTATGTGAAAGCAG+TGG | 0.667259 | 8.2:+1359399 | MS.gene95152:CDS |
TATTCCGGTGAGGATTGAGA+AGG | 0.668046 | 8.2:+1359338 | MS.gene95152:CDS |
TGTACTCATAGTCACCCGAT+GGG | 0.668108 | 8.2:-1360056 | None:intergenic |
TAGCTATTTCTTCTCCATGG+AGG | 0.674555 | 8.2:-1360285 | None:intergenic |
AGTATTAGGAAATGAAGATG+CGG | 0.688266 | 8.2:+1359503 | MS.gene95152:CDS |
GAGGATTGAGAAGGTAAAGG+CGG | 0.701460 | 8.2:+1359347 | MS.gene95152:CDS |
GGCGTTTGAGAGTAACGAGG+CGG | 0.709363 | 8.2:+1359368 | MS.gene95152:CDS |
GGCGGCGTTTGAGAGTAACG+AGG | 0.791545 | 8.2:+1359365 | MS.gene95152:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTAGTATTAATTTAGTTT+TGG | + | chr8.2:1359832-1359851 | MS.gene95152:intron | 10.0% |
!!! | GTATTAATTTAGTTTTGGTT+TGG | + | chr8.2:1359837-1359856 | MS.gene95152:intron | 20.0% |
! | AAATCATCAGTTAAACTTTC+AGG | - | chr8.2:1359438-1359457 | None:intergenic | 25.0% |
! | AAGAAATAGAAAATTCCCAT+CGG | + | chr8.2:1360041-1360060 | MS.gene95152:CDS | 25.0% |
! | ACTTAATTCATTCAAATGTG+AGG | + | chr8.2:1359779-1359798 | MS.gene95152:intron | 25.0% |
! | ACTTTACCAACAAATACTAA+AGG | - | chr8.2:1360189-1360208 | None:intergenic | 25.0% |
! | AGTAAAATTGATGTTAGAGT+TGG | + | chr8.2:1360426-1360445 | MS.gene95152:CDS | 25.0% |
! | CTTTACCAACAAATACTAAA+GGG | - | chr8.2:1360188-1360207 | None:intergenic | 25.0% |
!! | GATATACTGAAAGAGATTTT+CGG | + | chr8.2:1359585-1359604 | MS.gene95152:CDS | 25.0% |
!!! | AAAGAAGTGTATTGATTTGT+AGG | - | chr8.2:1360153-1360172 | None:intergenic | 25.0% |
!!! | AATTATAGGAAGTGTTATTC+CGG | + | chr8.2:1359323-1359342 | MS.gene95152:CDS | 25.0% |
!!! | AATTTAGTTTTGGTTTGGTT+TGG | + | chr8.2:1359842-1359861 | MS.gene95152:intron | 25.0% |
AGAAATAGAAAATTCCCATC+GGG | + | chr8.2:1360042-1360061 | MS.gene95152:CDS | 30.0% | |
AGTATTAGGAAATGAAGATG+CGG | + | chr8.2:1359503-1359522 | MS.gene95152:CDS | 30.0% | |
CATTAGTTGTTCTCTTATAC+TGG | - | chr8.2:1360332-1360351 | None:intergenic | 30.0% | |
GAGTACATTGATGTGAATTA+TGG | + | chr8.2:1360072-1360091 | MS.gene95152:CDS | 30.0% | |
GTATAAGAGAACAACTAATG+AGG | + | chr8.2:1360332-1360351 | MS.gene95152:CDS | 30.0% | |
TAAAGTTGAAGAGCTGAAAA+GGG | + | chr8.2:1360203-1360222 | MS.gene95152:CDS | 30.0% | |
TAAGGACTCTATGAAAACAA+TGG | + | chr8.2:1360251-1360270 | MS.gene95152:CDS | 30.0% | |
TACATTGATGTGAATTATGG+TGG | + | chr8.2:1360075-1360094 | MS.gene95152:CDS | 30.0% | |
TATTTCGAATTCTGCCATAA+GGG | - | chr8.2:1360124-1360143 | None:intergenic | 30.0% | |
! | ACAATCTCAGGGATAATTTT+GGG | + | chr8.2:1360403-1360422 | MS.gene95152:CDS | 30.0% |
! | GTTTTCCCTTTAGTATTTGT+TGG | + | chr8.2:1360180-1360199 | MS.gene95152:CDS | 30.0% |
! | TACAATCTCAGGGATAATTT+TGG | + | chr8.2:1360402-1360421 | MS.gene95152:CDS | 30.0% |
!! | TTTTGAGTGGTATGATTATG+AGG | + | chr8.2:1359554-1359573 | MS.gene95152:CDS | 30.0% |
AATTCTGTGAGAGCAGTATT+AGG | + | chr8.2:1359489-1359508 | MS.gene95152:CDS | 35.0% | |
AGAAAGTCCATTGGATTTGA+TGG | + | chr8.2:1360363-1360382 | MS.gene95152:CDS | 35.0% | |
AGATCTTGTGAAATCGTTCA+TGG | + | chr8.2:1359461-1359480 | MS.gene95152:CDS | 35.0% | |
CATTGTTGAAACATCCCTTA+TGG | + | chr8.2:1360107-1360126 | MS.gene95152:CDS | 35.0% | |
CTATTTCGAATTCTGCCATA+AGG | - | chr8.2:1360125-1360144 | None:intergenic | 35.0% | |
CTGAGATTGTATGCTTTCAA+GGG | - | chr8.2:1360393-1360412 | None:intergenic | 35.0% | |
GAAAGAGAAGATTAGAAGAG+AGG | + | chr8.2:1359632-1359651 | MS.gene95152:CDS | 35.0% | |
GTAAAGTTGAAGAGCTGAAA+AGG | + | chr8.2:1360202-1360221 | MS.gene95152:CDS | 35.0% | |
GTATGATTATGAGGAGAAGA+AGG | + | chr8.2:1359563-1359582 | MS.gene95152:CDS | 35.0% | |
! | ATGATGATCGTGATTTTGAG+TGG | + | chr8.2:1359541-1359560 | MS.gene95152:CDS | 35.0% |
! | CTTGAAAGCATACAATCTCA+GGG | + | chr8.2:1360392-1360411 | MS.gene95152:CDS | 35.0% |
! | GATAATGTGCAGTGCTATTA+AGG | + | chr8.2:1360233-1360252 | MS.gene95152:CDS | 35.0% |
!! | ATGTAGCTATTTCTTCTCCA+TGG | - | chr8.2:1360291-1360310 | None:intergenic | 35.0% |
AGGGCTTTGCAAATCTAAGT+GGG | + | chr8.2:1360017-1360036 | MS.gene95152:intron | 40.0% | |
ATAGCTACATGCAAGCTAAG+TGG | + | chr8.2:1360301-1360320 | MS.gene95152:CDS | 40.0% | |
CCTGAGATTGTATGCTTTCA+AGG | - | chr8.2:1360394-1360413 | None:intergenic | 40.0% | |
GTTGCAACAAGAAAGTCCAT+TGG | + | chr8.2:1360354-1360373 | MS.gene95152:CDS | 40.0% | |
TTTACCTTCTCAATCCTCAC+CGG | - | chr8.2:1359345-1359364 | None:intergenic | 40.0% | |
! | CCTTGAAAGCATACAATCTC+AGG | + | chr8.2:1360391-1360410 | MS.gene95152:CDS | 40.0% |
!! | TAGCTATTTCTTCTCCATGG+AGG | - | chr8.2:1360288-1360307 | None:intergenic | 40.0% |
!! | TGCTGTACTTTTTGTGTCCA+GGG | + | chr8.2:1359998-1360017 | MS.gene95152:intron | 40.0% |
!! | TTGCTGTACTTTTTGTGTCC+AGG | + | chr8.2:1359997-1360016 | MS.gene95152:intron | 40.0% |
AAGAGCTGAAAAGGGTTGTG+AGG | + | chr8.2:1360211-1360230 | MS.gene95152:CDS | 45.0% | |
ATCACCACCAACGACTTGAA+TGG | - | chr8.2:1359667-1359686 | None:intergenic | 45.0% | |
ATGTACTCATAGTCACCCGA+TGG | - | chr8.2:1360060-1360079 | None:intergenic | 45.0% | |
CACTTAGATTTGCAAAGCCC+TGG | - | chr8.2:1360018-1360037 | None:intergenic | 45.0% | |
CAGGGCTTTGCAAATCTAAG+TGG | + | chr8.2:1360016-1360035 | MS.gene95152:intron | 45.0% | |
CATAATCATGTCACGCTTGC+GGG | + | chr8.2:1359710-1359729 | MS.gene95152:CDS | 45.0% | |
CGTTAAATGCAGCAGTCAAC+TGG | - | chr8.2:1360452-1360471 | None:intergenic | 45.0% | |
GAACTTGCCATTCAAGTCGT+TGG | + | chr8.2:1359657-1359676 | MS.gene95152:CDS | 45.0% | |
GAGGATTGAGAAGGTAAAGG+CGG | + | chr8.2:1359347-1359366 | MS.gene95152:CDS | 45.0% | |
GCATAATCATGTCACGCTTG+CGG | + | chr8.2:1359709-1359728 | MS.gene95152:CDS | 45.0% | |
GGGTCTTCCATCAAATCCAA+TGG | - | chr8.2:1360373-1360392 | None:intergenic | 45.0% | |
GGTGAGGATTGAGAAGGTAA+AGG | + | chr8.2:1359344-1359363 | MS.gene95152:CDS | 45.0% | |
TATTCCGGTGAGGATTGAGA+AGG | + | chr8.2:1359338-1359357 | MS.gene95152:CDS | 45.0% | |
TGGATATGCATGTACCTCCA+TGG | + | chr8.2:1360271-1360290 | MS.gene95152:CDS | 45.0% | |
TGTACTCATAGTCACCCGAT+GGG | - | chr8.2:1360059-1360078 | None:intergenic | 45.0% | |
!! | TAGGAAGTGTTATTCCGGTG+AGG | + | chr8.2:1359328-1359347 | MS.gene95152:CDS | 45.0% |
CTTGCCATTCAAGTCGTTGG+TGG | + | chr8.2:1359660-1359679 | MS.gene95152:CDS | 50.0% | |
GGTGGTGATAAGTCTTCGTC+TGG | + | chr8.2:1359678-1359697 | MS.gene95152:CDS | 50.0% | |
AAAGCAGTGGAAGCGAGCAC+TGG | + | chr8.2:1359412-1359431 | MS.gene95152:CDS | 55.0% | |
GGCGTTTGAGAGTAACGAGG+CGG | + | chr8.2:1359368-1359387 | MS.gene95152:CDS | 55.0% | |
GGGAGGCTATGTGAAAGCAG+TGG | + | chr8.2:1359399-1359418 | MS.gene95152:CDS | 55.0% | |
GTTTGAGAGTAACGAGGCGG+CGG | + | chr8.2:1359371-1359390 | MS.gene95152:CDS | 55.0% | |
!! | CGGGAGAGAGGTTTTGATGC+TGG | + | chr8.2:1359729-1359748 | MS.gene95152:CDS | 55.0% |
ATGTCACGCTTGCGGGAGAG+AGG | + | chr8.2:1359717-1359736 | MS.gene95152:CDS | 60.0% | |
GGCGGCGTTTGAGAGTAACG+AGG | + | chr8.2:1359365-1359384 | MS.gene95152:CDS | 60.0% | |
AGTAACGAGGCGGCGGCTCG+TGG | + | chr8.2:1359378-1359397 | MS.gene95152:CDS | 70.0% | |
GTAACGAGGCGGCGGCTCGT+GGG | + | chr8.2:1359379-1359398 | MS.gene95152:CDS | 70.0% | |
! | ACGAGGCGGCGGCTCGTGGG+AGG | + | chr8.2:1359382-1359401 | MS.gene95152:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 1359315 | 1360479 | 1359315 | ID=MS.gene95152 |
chr8.2 | mRNA | 1359315 | 1360479 | 1359315 | ID=MS.gene95152.t1;Parent=MS.gene95152 |
chr8.2 | exon | 1359315 | 1359750 | 1359315 | ID=MS.gene95152.t1.exon1;Parent=MS.gene95152.t1 |
chr8.2 | CDS | 1359315 | 1359750 | 1359315 | ID=cds.MS.gene95152.t1;Parent=MS.gene95152.t1 |
chr8.2 | exon | 1360019 | 1360479 | 1360019 | ID=MS.gene95152.t1.exon2;Parent=MS.gene95152.t1 |
chr8.2 | CDS | 1360019 | 1360479 | 1360019 | ID=cds.MS.gene95152.t1;Parent=MS.gene95152.t1 |
Gene Sequence |
Protein sequence |