Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95201.t1 | XP_013459055.1 | 90.8 | 393 | 27 | 2 | 1 | 384 | 1 | 393 | 1.50E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95201.t1 | B0JZ85 | 24.9 | 173 | 119 | 3 | 122 | 288 | 97 | 264 | 2.7e-06 | 54.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95201.t1 | A0A072UVJ5 | 90.8 | 393 | 27 | 2 | 1 | 384 | 1 | 393 | 1.1e-197 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95201.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052335 | MS.gene95201 | 0.801811 | 7.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95201.t1 | MTR_3g023750 | 92.593 | 378 | 24 | 1 | 11 | 384 | 16 | 393 | 0.0 | 716 |
| MS.gene95201.t1 | MTR_5g097950 | 69.432 | 229 | 70 | 0 | 156 | 384 | 268 | 496 | 2.34e-103 | 314 |
| MS.gene95201.t1 | MTR_5g097950 | 69.655 | 145 | 35 | 1 | 46 | 190 | 17 | 152 | 1.13e-56 | 193 |
| MS.gene95201.t1 | MTR_5g097950 | 31.602 | 231 | 114 | 9 | 156 | 378 | 204 | 398 | 1.44e-14 | 75.5 |
| MS.gene95201.t1 | MTR_5g097950 | 29.457 | 129 | 69 | 3 | 113 | 220 | 361 | 488 | 9.59e-11 | 63.5 |
| MS.gene95201.t1 | MTR_5g097950 | 69.432 | 229 | 70 | 0 | 156 | 384 | 304 | 532 | 3.86e-103 | 315 |
| MS.gene95201.t1 | MTR_5g097950 | 69.655 | 145 | 35 | 1 | 46 | 190 | 53 | 188 | 1.83e-56 | 193 |
| MS.gene95201.t1 | MTR_5g097950 | 31.602 | 231 | 114 | 9 | 156 | 378 | 240 | 434 | 1.17e-14 | 75.9 |
| MS.gene95201.t1 | MTR_5g097950 | 29.457 | 129 | 69 | 3 | 113 | 220 | 397 | 524 | 8.09e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 8.71e-22 | 98.2 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.38e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.33e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 146 | 308 | 8.86e-22 | 97.8 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 195 | 411 | 1.64e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 148 | 409 | 5.00e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 146 | 308 | 8.86e-22 | 97.8 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 195 | 411 | 1.64e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 148 | 409 | 5.00e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 9.24e-22 | 97.8 |
| MS.gene95201.t1 | AT5G61190 | 25.118 | 211 | 118 | 6 | 112 | 284 | 289 | 497 | 1.63e-13 | 72.8 |
| MS.gene95201.t1 | AT5G61190 | 25.442 | 283 | 155 | 10 | 119 | 374 | 242 | 495 | 7.25e-13 | 70.9 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.12e-21 | 97.8 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.64e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.81e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.24e-21 | 97.4 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.75e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 5.09e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.24e-21 | 97.4 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.74e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.75e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.27e-21 | 97.4 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.78e-12 | 69.7 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.81e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.86e-21 | 97.1 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.76e-12 | 69.3 |
| MS.gene95201.t1 | AT5G61190 | 22.776 | 281 | 173 | 7 | 119 | 374 | 242 | 503 | 3.90e-12 | 68.6 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.95e-21 | 96.7 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.87e-12 | 69.3 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.21e-12 | 68.2 |
| MS.gene95201.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.95e-21 | 96.7 |
| MS.gene95201.t1 | AT5G61190 | 24.201 | 219 | 118 | 6 | 112 | 284 | 289 | 505 | 1.87e-12 | 69.3 |
| MS.gene95201.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 4.21e-12 | 68.2 |
Find 88 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCATAGCAGCATGTTTC+TGG | 0.170828 | 3.2:+13440868 | None:intergenic |
| AACCAACAGATTATCAAAAT+TGG | 0.227652 | 3.2:-13445046 | MS.gene95201:CDS |
| TCTGATGCCTTCTTTGGTTT+TGG | 0.255884 | 3.2:+13441017 | None:intergenic |
| ACATGGCCACCACAAATTTA+TGG | 0.268191 | 3.2:-13443375 | MS.gene95201:CDS |
| TCAAGTTCTGATGCCTTCTT+TGG | 0.274301 | 3.2:+13441011 | None:intergenic |
| ACCGCAACAAATACTTTAAT+CGG | 0.278525 | 3.2:-13441068 | MS.gene95201:CDS |
| CGCTTGAATTCGGCAATAGA+TGG | 0.316684 | 3.2:+13441287 | None:intergenic |
| GCAGAATCAACCTGTTTCTT+AGG | 0.337690 | 3.2:+13443111 | None:intergenic |
| GTTCTTCAAGTGTTTCTTAC+CGG | 0.356623 | 3.2:+13441148 | None:intergenic |
| ATCAGGGAATGATGAATAAT+AGG | 0.360615 | 3.2:+13445148 | None:intergenic |
| AACACCGTTACGCTTGAATT+CGG | 0.361255 | 3.2:+13441277 | None:intergenic |
| AAGCTTTGGTGACTTTGGTT+TGG | 0.371601 | 3.2:+13443325 | None:intergenic |
| ATACAAGGACAAGGGTTAAT+TGG | 0.382675 | 3.2:-13443156 | MS.gene95201:CDS |
| CACGCAGAAGGTAAACTTGC+AGG | 0.393751 | 3.2:+13443405 | None:intergenic |
| GGAGGATGAAGTGAAGGATC+AGG | 0.403946 | 3.2:+13445131 | None:intergenic |
| GCAATCCGAGCCTAAGAAAC+AGG | 0.404268 | 3.2:-13443121 | MS.gene95201:CDS |
| TCTCAAAGCTTTGGTGACTT+TGG | 0.404347 | 3.2:+13443320 | None:intergenic |
| TAAAGTATTTGTTGCGGTGG+CGG | 0.415658 | 3.2:+13441073 | None:intergenic |
| GCATATATCAAACATCTTGC+TGG | 0.416947 | 3.2:-13443045 | MS.gene95201:CDS |
| CACTTCACATCTCAAAGCTT+TGG | 0.420423 | 3.2:+13443311 | None:intergenic |
| TTGTTGTTGCTGGAAATTGT+AGG | 0.427790 | 3.2:+13445178 | None:intergenic |
| GCAAGATTAATTGTAACAGC+AGG | 0.443520 | 3.2:-13441193 | MS.gene95201:CDS |
| GTTGCCTTGATGTCTAATAA+TGG | 0.452518 | 3.2:-13441317 | MS.gene95201:CDS |
| TGGGCGGTGTAAAGAGAAAC+AGG | 0.453372 | 3.2:+13445068 | None:intergenic |
| TGGGAGAAAGCATGCTGCTC+AGG | 0.459949 | 3.2:-13443025 | MS.gene95201:intron |
| CTTACAAGATCATATCTGAT+AGG | 0.461948 | 3.2:+13445005 | None:intergenic |
| ATCAACCTGTTTCTTAGGCT+CGG | 0.472485 | 3.2:+13443116 | None:intergenic |
| GGTGAAAATTGAAAACTGTC+TGG | 0.474169 | 3.2:+13440898 | None:intergenic |
| GTCTCGTTGCCATAAATTTG+TGG | 0.477870 | 3.2:+13443366 | None:intergenic |
| CTTCTAATATTGCAGGCTGT+TGG | 0.480500 | 3.2:-13443453 | MS.gene95201:intron |
| GAGCTTGGTATTGTTGTTGA+GGG | 0.489208 | 3.2:+13445204 | None:intergenic |
| GGCTCGGATTGCTTGACTAC+GGG | 0.489539 | 3.2:+13443132 | None:intergenic |
| AGTATTTGTTGCGGTGGCGG+TGG | 0.490137 | 3.2:+13441076 | None:intergenic |
| TTTGCAAGTGGGTCAGTGCC+AGG | 0.495030 | 3.2:+13445110 | None:intergenic |
| TGAGCTTGGTATTGTTGTTG+AGG | 0.503622 | 3.2:+13445203 | None:intergenic |
| TTGGTGACTTTGGTTTGGTT+AGG | 0.506602 | 3.2:+13443330 | None:intergenic |
| CATATATCAAACATCTTGCT+GGG | 0.508931 | 3.2:-13443044 | MS.gene95201:CDS |
| AGGCTCGGATTGCTTGACTA+CGG | 0.513657 | 3.2:+13443131 | None:intergenic |
| GAAGGAGGAGCTGCAGTTGA+TGG | 0.516170 | 3.2:-13440960 | MS.gene95201:CDS |
| AAGAAGGCAGGGTCAGTCAC+TGG | 0.516327 | 3.2:-13440846 | MS.gene95201:CDS |
| TGTTGTTGCTGGAAATTGTA+GGG | 0.518373 | 3.2:+13445179 | None:intergenic |
| TCTTATGAAAGTCACATAGC+TGG | 0.520481 | 3.2:-13443261 | MS.gene95201:CDS |
| GAATTCAAGCGTAACGGTGT+TGG | 0.521387 | 3.2:-13441275 | MS.gene95201:CDS |
| GATCCTTCACTTCATCCTCC+TGG | 0.522615 | 3.2:-13445128 | MS.gene95201:CDS |
| ACATGCTGCTATGGTGAAGA+AGG | 0.523999 | 3.2:-13440862 | MS.gene95201:CDS |
| TTCGCATGAGATGTAATAGT+AGG | 0.525742 | 3.2:+13443201 | None:intergenic |
| CGATCAACCAAAACCAAAGA+AGG | 0.528394 | 3.2:-13441024 | MS.gene95201:CDS |
| AATGCCATTATTAGACATCA+AGG | 0.532248 | 3.2:+13441313 | None:intergenic |
| GCAGGGTCAGTCACTGGCTG+AGG | 0.532286 | 3.2:-13440840 | None:intergenic |
| CTTCTGCGTGGAATGGTACA+TGG | 0.535273 | 3.2:-13443392 | MS.gene95201:CDS |
| GCTTGAATTCGGCAATAGAT+GGG | 0.537412 | 3.2:+13441288 | None:intergenic |
| GCTGCTATGGTGAAGAAGGC+AGG | 0.537781 | 3.2:-13440858 | MS.gene95201:CDS |
| CCGCAACAAATACTTTAATC+GGG | 0.541756 | 3.2:-13441067 | MS.gene95201:CDS |
| CAGCATGTTTCTGGCCAACA+AGG | 0.542850 | 3.2:+13440877 | None:intergenic |
| TAAGAAACACTTGAAGAACT+TGG | 0.549430 | 3.2:-13441144 | MS.gene95201:CDS |
| ATCTACATTACACACTTAGC+CGG | 0.550310 | 3.2:-13441167 | MS.gene95201:CDS |
| AGTTTACCTTCTGCGTGGAA+TGG | 0.550393 | 3.2:-13443399 | MS.gene95201:CDS |
| CAAGATTAATTGTAACAGCA+GGG | 0.550872 | 3.2:-13441192 | MS.gene95201:CDS |
| AAAAGCTGCCAAGAAAATCA+AGG | 0.552640 | 3.2:-13441243 | MS.gene95201:CDS |
| AAAATCGATGTCGGCACTAG+TGG | 0.557209 | 3.2:-13441104 | MS.gene95201:CDS |
| CCCGATTAAAGTATTTGTTG+CGG | 0.558626 | 3.2:+13441067 | None:intergenic |
| TTGATGTCTAATAATGGCAT+TGG | 0.569058 | 3.2:-13441311 | MS.gene95201:CDS |
| GTCAAAGAAACGTAAAGTTG+TGG | 0.571297 | 3.2:-13440982 | MS.gene95201:CDS |
| GAAACAGGTTGATTCTGCAA+CGG | 0.579888 | 3.2:-13443106 | MS.gene95201:CDS |
| TTGATAATCTGTTGGTTGGG+CGG | 0.583308 | 3.2:+13445052 | None:intergenic |
| TATCTGATAGGTTCAGATTG+TGG | 0.585811 | 3.2:+13445017 | None:intergenic |
| TCAAGGTTGCTCAGTCTGCA+TGG | 0.588753 | 3.2:-13441226 | MS.gene95201:CDS |
| GATTAAAGTATTTGTTGCGG+TGG | 0.590642 | 3.2:+13441070 | None:intergenic |
| GGAAATTGTAGGGTTGAGCT+TGG | 0.593362 | 3.2:+13445189 | None:intergenic |
| GTGCCAGGAGGATGAAGTGA+AGG | 0.595047 | 3.2:+13445125 | None:intergenic |
| ACTGACACAAGTAGTATACA+AGG | 0.597057 | 3.2:-13443171 | MS.gene95201:CDS |
| TGGCCAGAAACATGCTGCTA+TGG | 0.598112 | 3.2:-13440871 | MS.gene95201:CDS |
| ATCGGGCCACAAGAAAAGCC+AGG | 0.598973 | 3.2:-13441050 | MS.gene95201:CDS |
| CATGTACCATTCCACGCAGA+AGG | 0.601401 | 3.2:+13443393 | None:intergenic |
| GAGGATGAAGTGAAGGATCA+GGG | 0.602017 | 3.2:+13445132 | None:intergenic |
| CTGCTATGGTGAAGAAGGCA+GGG | 0.613128 | 3.2:-13440857 | MS.gene95201:CDS |
| AAGAAACGTAAAGTTGTGGA+AGG | 0.617548 | 3.2:-13440978 | MS.gene95201:CDS |
| AAAGATGTTGAATTTGCAAG+TGG | 0.619628 | 3.2:+13445098 | None:intergenic |
| AAACGTAAAGTTGTGGAAGG+AGG | 0.636655 | 3.2:-13440975 | MS.gene95201:CDS |
| TCGTTGCCATAAATTTGTGG+TGG | 0.644262 | 3.2:+13443369 | None:intergenic |
| AAGATGTTGAATTTGCAAGT+GGG | 0.649561 | 3.2:+13445099 | None:intergenic |
| ACAAGTAGTATACAAGGACA+AGG | 0.651454 | 3.2:-13443165 | MS.gene95201:CDS |
| CTGCAAGTTTACCTTCTGCG+TGG | 0.655416 | 3.2:-13443404 | MS.gene95201:CDS |
| ATTGCCGAATTCAAGCGTAA+CGG | 0.711887 | 3.2:-13441281 | MS.gene95201:CDS |
| GCAAGTGGGTCAGTGCCAGG+AGG | 0.726366 | 3.2:+13445113 | None:intergenic |
| CAAGTAGTATACAAGGACAA+GGG | 0.731447 | 3.2:-13443164 | MS.gene95201:CDS |
| AATGTGCACATTATGCAATG+TGG | 0.739375 | 3.2:-13440931 | MS.gene95201:CDS |
| GCGGTGTAAAGAGAAACAGG+AGG | 0.820151 | 3.2:+13445071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACATTTTTTAAAAATG+TGG | - | chr3.2:13442360-13442379 | MS.gene95201:intron | 10.0% |
| !! | AATATTAAAAGGATGAAAAT+TGG | - | chr3.2:13443238-13443257 | MS.gene95201:CDS | 15.0% |
| !! | CATATATTGTTAATAGAATT+GGG | - | chr3.2:13442441-13442460 | MS.gene95201:intron | 15.0% |
| !! | TAATACAAATAATTGTCAAA+TGG | - | chr3.2:13442166-13442185 | MS.gene95201:intron | 15.0% |
| !! | TATAATATCAATTGTTAATC+AGG | - | chr3.2:13443907-13443926 | MS.gene95201:intron | 15.0% |
| !! | TATGATAAATAAATATCATG+TGG | - | chr3.2:13444336-13444355 | MS.gene95201:intron | 15.0% |
| !! | TCATATATTGTTAATAGAAT+TGG | - | chr3.2:13442440-13442459 | MS.gene95201:intron | 15.0% |
| !! | TCCAATTAAGATAAAAATAA+CGG | + | chr3.2:13443304-13443323 | None:intergenic | 15.0% |
| !! | TTTAATACAAATAATGTCAA+TGG | - | chr3.2:13441913-13441932 | MS.gene95201:intron | 15.0% |
| !!! | ATTAAGTAAAAATAGTCTTT+TGG | - | chr3.2:13444382-13444401 | MS.gene95201:intron | 15.0% |
| !!! | TTAAGTAAAAATAGTCTTTT+GGG | - | chr3.2:13444383-13444402 | MS.gene95201:intron | 15.0% |
| !! | AAAAAATACTTGTTTGTTCA+AGG | + | chr3.2:13444486-13444505 | None:intergenic | 20.0% |
| !! | AAAAGTGAGAACAATAAAAT+AGG | - | chr3.2:13442485-13442504 | MS.gene95201:intron | 20.0% |
| !! | AAAGTGAGAACAATAAAATA+GGG | - | chr3.2:13442486-13442505 | MS.gene95201:intron | 20.0% |
| !! | AATTGAAAACAACAATCAAA+AGG | + | chr3.2:13441082-13441101 | None:intergenic | 20.0% |
| !! | ATTGAAAACAACAATCAAAA+GGG | + | chr3.2:13441081-13441100 | None:intergenic | 20.0% |
| !! | ATTGTCTACAATATAGAATA+AGG | + | chr3.2:13443122-13443141 | None:intergenic | 20.0% |
| !! | ATTTGAAAACTAAGATCAAA+AGG | + | chr3.2:13441247-13441266 | None:intergenic | 20.0% |
| !! | CAAAATAAATAAAGAACAAG+TGG | + | chr3.2:13444215-13444234 | None:intergenic | 20.0% |
| !! | TTATCTATAGATATACATCA+AGG | + | chr3.2:13444577-13444596 | None:intergenic | 20.0% |
| !! | TTTGAAAACTAAGATCAAAA+GGG | + | chr3.2:13441246-13441265 | None:intergenic | 20.0% |
| !!! | ACCGTTATTTTTATCTTAAT+TGG | - | chr3.2:13443300-13443319 | MS.gene95201:CDS | 20.0% |
| !!! | ATAATCAGGGTTTTTAAAAT+GGG | - | chr3.2:13441723-13441742 | MS.gene95201:intron | 20.0% |
| !!! | GAATAAGTTGAATACAATAA+TGG | + | chr3.2:13444138-13444157 | None:intergenic | 20.0% |
| !!! | GGTTTTTAAAAGTTGAAAAA+AGG | + | chr3.2:13443993-13444012 | None:intergenic | 20.0% |
| !!! | TCATAATTAGGGTTTTTAAA+TGG | - | chr3.2:13441671-13441690 | MS.gene95201:intron | 20.0% |
| !!! | TCATAGTTAGAGTTTTAAAA+TGG | - | chr3.2:13441575-13441594 | MS.gene95201:intron | 20.0% |
| !!! | TTTCTTATGTTATGTCATTT+GGG | - | chr3.2:13441286-13441305 | MS.gene95201:CDS | 20.0% |
| !!! | TTTCTTATGTTTTTTCATCT+GGG | - | chr3.2:13441121-13441140 | MS.gene95201:CDS | 20.0% |
| !!! | TTTTCTTATGTTATGTCATT+TGG | - | chr3.2:13441285-13441304 | MS.gene95201:CDS | 20.0% |
| !!! | TTTTCTTATGTTTTTTCATC+TGG | - | chr3.2:13441120-13441139 | MS.gene95201:CDS | 20.0% |
| !!! | TTTTTTCTTCTTTGTTAATG+TGG | - | chr3.2:13442113-13442132 | MS.gene95201:intron | 20.0% |
| ! | AAATTCAAAACCCTAACATA+CGG | + | chr3.2:13442536-13442555 | None:intergenic | 25.0% |
| ! | AACAAATAAAATGAGCAACT+TGG | + | chr3.2:13444637-13444656 | None:intergenic | 25.0% |
| ! | AACCAACAGATTATCAAAAT+TGG | - | chr3.2:13441005-13441024 | MS.gene95201:CDS | 25.0% |
| ! | AAGAAGAAAAAACATACAAG+TGG | + | chr3.2:13442105-13442124 | None:intergenic | 25.0% |
| ! | AATACAAATAATGTCAATGG+TGG | - | chr3.2:13441916-13441935 | MS.gene95201:intron | 25.0% |
| ! | ACAAATAAAATGAGCAACTT+GGG | + | chr3.2:13444636-13444655 | None:intergenic | 25.0% |
| ! | CATTTACTAATTAACTCTGT+AGG | - | chr3.2:13443376-13443395 | MS.gene95201:CDS | 25.0% |
| ! | CTACAGAGTTAATTAGTAAA+TGG | + | chr3.2:13443378-13443397 | None:intergenic | 25.0% |
| ! | GACAGAACAAGAATATTAAA+AGG | - | chr3.2:13443227-13443246 | MS.gene95201:CDS | 25.0% |
| ! | GTTGGAATTCATCTTAATTA+GGG | - | chr3.2:13441513-13441532 | MS.gene95201:intron | 25.0% |
| ! | TGTTGGAATTCATCTTAATT+AGG | - | chr3.2:13441512-13441531 | MS.gene95201:intron | 25.0% |
| !! | AACAACAATAGTCTTTTAGT+AGG | - | chr3.2:13443851-13443870 | MS.gene95201:intron | 25.0% |
| !! | ATAGCGTGATTTTCATAATT+AGG | - | chr3.2:13441659-13441678 | MS.gene95201:intron | 25.0% |
| !! | TAGCGTGATTTTCATAATTA+GGG | - | chr3.2:13441660-13441679 | MS.gene95201:intron | 25.0% |
| !! | TTCTTATGTTATGTCATTTG+GGG | - | chr3.2:13441287-13441306 | MS.gene95201:CDS | 25.0% |
| !!! | AATTTTGATAATCTGTTGGT+TGG | + | chr3.2:13441006-13441025 | None:intergenic | 25.0% |
| !!! | ATCCAATTTTGATAATCTGT+TGG | + | chr3.2:13441010-13441029 | None:intergenic | 25.0% |
| !!! | ATGAAATAGTGGATAAGTTT+TGG | - | chr3.2:13441441-13441460 | MS.gene95201:intron | 25.0% |
| !!! | ATTTTGATAATCTGTTGGTT+GGG | + | chr3.2:13441005-13441024 | None:intergenic | 25.0% |
| !!! | CATAATCAGGGTTTTTAAAA+TGG | - | chr3.2:13441722-13441741 | MS.gene95201:intron | 25.0% |
| !!! | CTTAATTAGGGTTTTTAGAA+TGG | - | chr3.2:13441525-13441544 | MS.gene95201:intron | 25.0% |
| !!! | GTTAGGGTTTTGAATTTTAT+TGG | - | chr3.2:13442539-13442558 | MS.gene95201:intron | 25.0% |
| !!! | TTCATTTTAACGTAGTTGTT+TGG | - | chr3.2:13441210-13441229 | MS.gene95201:CDS | 25.0% |
| !!! | TTTTAGAATGGAAATGATTG+TGG | - | chr3.2:13441537-13441556 | MS.gene95201:intron | 25.0% |
| AAAGATGTTGAATTTGCAAG+TGG | + | chr3.2:13440956-13440975 | None:intergenic | 30.0% | |
| AACAATGAGGACCTTATATA+CGG | - | chr3.2:13444423-13444442 | MS.gene95201:intron | 30.0% | |
| AACACAACACTAAACTCATT+TGG | + | chr3.2:13443666-13443685 | None:intergenic | 30.0% | |
| AAGATGTTGAATTTGCAAGT+GGG | + | chr3.2:13440955-13440974 | None:intergenic | 30.0% | |
| AATGCCATTATTAGACATCA+AGG | + | chr3.2:13444741-13444760 | None:intergenic | 30.0% | |
| AATGTGAAGTTCTGTTAAGT+GGG | - | chr3.2:13441489-13441508 | MS.gene95201:intron | 30.0% | |
| AATTCAAAACCCTAACATAC+GGG | + | chr3.2:13442535-13442554 | None:intergenic | 30.0% | |
| ACCGCAACAAATACTTTAAT+CGG | - | chr3.2:13444983-13445002 | MS.gene95201:intron | 30.0% | |
| ACTCAGAAACATTCAACTAA+TGG | + | chr3.2:13444691-13444710 | None:intergenic | 30.0% | |
| AGAAGATGAATGATGATAGT+CGG | - | chr3.2:13442385-13442404 | MS.gene95201:intron | 30.0% | |
| ATAATTCAGGGATAACAGAA+GGG | - | chr3.2:13443935-13443954 | MS.gene95201:intron | 30.0% | |
| ATAGGACAATATGGATATCA+TGG | - | chr3.2:13442253-13442272 | MS.gene95201:intron | 30.0% | |
| ATCAGGGAATGATGAATAAT+AGG | + | chr3.2:13440906-13440925 | None:intergenic | 30.0% | |
| ATTTAGCGTTCACAAATGAA+AGG | - | chr3.2:13441629-13441648 | MS.gene95201:intron | 30.0% | |
| CAAATAAAATGAGCAACTTG+GGG | + | chr3.2:13444635-13444654 | None:intergenic | 30.0% | |
| CAAGATTAATTGTAACAGCA+GGG | - | chr3.2:13444859-13444878 | MS.gene95201:intron | 30.0% | |
| CATATATCAAACATCTTGCT+GGG | - | chr3.2:13443007-13443026 | MS.gene95201:intron | 30.0% | |
| CTTACAAGATCATATCTGAT+AGG | + | chr3.2:13441049-13441068 | None:intergenic | 30.0% | |
| GATATCCATATTGTCCTATT+CGG | + | chr3.2:13442252-13442271 | None:intergenic | 30.0% | |
| GATGTCTAGTTATGAAATAG+TGG | - | chr3.2:13441430-13441449 | MS.gene95201:intron | 30.0% | |
| GCTATCTATATTGTCCTATT+CGG | + | chr3.2:13441999-13442018 | None:intergenic | 30.0% | |
| GTATGAAAATAAGAGAACCA+TGG | + | chr3.2:13443524-13443543 | None:intergenic | 30.0% | |
| GTTGCATGTAATCTTACAAA+AGG | + | chr3.2:13443072-13443091 | None:intergenic | 30.0% | |
| GTTTAGCTAATTAACACTGT+AGG | - | chr3.2:13443352-13443371 | MS.gene95201:CDS | 30.0% | |
| TAAGAAACACTTGAAGAACT+TGG | - | chr3.2:13444907-13444926 | MS.gene95201:intron | 30.0% | |
| TAATGTGAAGTTCTGTTAAG+TGG | - | chr3.2:13441488-13441507 | MS.gene95201:intron | 30.0% | |
| TCAAATCCAAAAATCGATGT+CGG | - | chr3.2:13444938-13444957 | MS.gene95201:intron | 30.0% | |
| TGCTTAGAAATTCTGTACTT+CGG | - | chr3.2:13444274-13444293 | MS.gene95201:intron | 30.0% | |
| TGTTTCGAAGAAATGAAGTT+TGG | + | chr3.2:13444302-13444321 | None:intergenic | 30.0% | |
| TTCAATGCTTCTAATATTGC+AGG | - | chr3.2:13442591-13442610 | MS.gene95201:intron | 30.0% | |
| TTGATGTCTAATAATGGCAT+TGG | - | chr3.2:13444740-13444759 | MS.gene95201:intron | 30.0% | |
| TTTAGTAGGAGTAGATTACA+TGG | - | chr3.2:13443865-13443884 | MS.gene95201:intron | 30.0% | |
| ! | GTTTTCAATTTTCACCTTGT+TGG | - | chr3.2:13445160-13445179 | MS.gene95201:CDS | 30.0% |
| !! | AGAGTATCGTAAAACAATAG+TGG | + | chr3.2:13441892-13441911 | None:intergenic | 30.0% |
| !! | CAACTTTTAAAAACCATTGC+CGG | - | chr3.2:13443998-13444017 | MS.gene95201:intron | 30.0% |
| !! | GGAAATAAAAAGTGTTCTTC+TGG | - | chr3.2:13443600-13443619 | MS.gene95201:intron | 30.0% |
| !! | TAATTTTGACGACAACAATG+AGG | - | chr3.2:13444410-13444429 | MS.gene95201:intron | 30.0% |
| !! | TGCATTTTGTTGTAGTTGTT+AGG | - | chr3.2:13441396-13441415 | MS.gene95201:intron | 30.0% |
| !!! | TTACGTGCATTTTAGCTAAA+TGG | + | chr3.2:13443402-13443421 | None:intergenic | 30.0% |
| AAAAGCTGCCAAGAAAATCA+AGG | - | chr3.2:13444808-13444827 | MS.gene95201:intron | 35.0% | |
| AAGAAACGTAAAGTTGTGGA+AGG | - | chr3.2:13445073-13445092 | MS.gene95201:CDS | 35.0% | |
| AATCAGGTCTCCATAATTCA+GGG | - | chr3.2:13443923-13443942 | MS.gene95201:intron | 35.0% | |
| AATGTGCACATTATGCAATG+TGG | - | chr3.2:13445120-13445139 | MS.gene95201:CDS | 35.0% | |
| ACAAGTAGTATACAAGGACA+AGG | - | chr3.2:13442886-13442905 | MS.gene95201:intron | 35.0% | |
| ACATAATGCACACACTTGTA+TGG | - | chr3.2:13443160-13443179 | MS.gene95201:CDS | 35.0% | |
| ACTGACACAAGTAGTATACA+AGG | - | chr3.2:13442880-13442899 | MS.gene95201:intron | 35.0% | |
| AGAACCATGAACAAGAGAAT+AGG | + | chr3.2:13443275-13443294 | None:intergenic | 35.0% | |
| AGATGAAGACAGGCTATAAA+TGG | - | chr3.2:13443623-13443642 | MS.gene95201:intron | 35.0% | |
| ATACAAGGACAAGGGTTAAT+TGG | - | chr3.2:13442895-13442914 | MS.gene95201:intron | 35.0% | |
| ATATCTAGAAGTCAAACTCG+TGG | - | chr3.2:13442040-13442059 | MS.gene95201:intron | 35.0% | |
| ATCTACATTACACACTTAGC+CGG | - | chr3.2:13444884-13444903 | MS.gene95201:intron | 35.0% | |
| CAAGTAGTATACAAGGACAA+GGG | - | chr3.2:13442887-13442906 | MS.gene95201:intron | 35.0% | |
| CATAATTCAGGGATAACAGA+AGG | - | chr3.2:13443934-13443953 | MS.gene95201:intron | 35.0% | |
| CCGCAACAAATACTTTAATC+GGG | - | chr3.2:13444984-13445003 | MS.gene95201:intron | 35.0% | |
| CTTCTGTTATCCCTGAATTA+TGG | + | chr3.2:13443936-13443955 | None:intergenic | 35.0% | |
| GAAAATAAGAGAACCATGGT+GGG | + | chr3.2:13443520-13443539 | None:intergenic | 35.0% | |
| GCAAGATTAATTGTAACAGC+AGG | - | chr3.2:13444858-13444877 | MS.gene95201:intron | 35.0% | |
| GCATATATCAAACATCTTGC+TGG | - | chr3.2:13443006-13443025 | MS.gene95201:intron | 35.0% | |
| GCTTAGAAATTCTGTACTTC+GGG | - | chr3.2:13444275-13444294 | MS.gene95201:intron | 35.0% | |
| GGTGAAAATTGAAAACTGTC+TGG | + | chr3.2:13445156-13445175 | None:intergenic | 35.0% | |
| GTCAAAGAAACGTAAAGTTG+TGG | - | chr3.2:13445069-13445088 | MS.gene95201:CDS | 35.0% | |
| GTGAGAACAATAAAATAGGG+AGG | - | chr3.2:13442489-13442508 | MS.gene95201:intron | 35.0% | |
| GTTCTTCAAGTGTTTCTTAC+CGG | + | chr3.2:13444906-13444925 | None:intergenic | 35.0% | |
| GTTGCCTTGATGTCTAATAA+TGG | - | chr3.2:13444734-13444753 | MS.gene95201:intron | 35.0% | |
| TAAAATGCACGTAAGATAGC+TGG | - | chr3.2:13443408-13443427 | MS.gene95201:CDS | 35.0% | |
| TAATCAGGTCTCCATAATTC+AGG | - | chr3.2:13443922-13443941 | MS.gene95201:intron | 35.0% | |
| TATCTGATAGGTTCAGATTG+TGG | + | chr3.2:13441037-13441056 | None:intergenic | 35.0% | |
| TCTTATGAAAGTCACATAGC+TGG | - | chr3.2:13442790-13442809 | MS.gene95201:intron | 35.0% | |
| TGAAAATAAGAGAACCATGG+TGG | + | chr3.2:13443521-13443540 | None:intergenic | 35.0% | |
| TGATTTGATCCCGTATGTTA+GGG | - | chr3.2:13442523-13442542 | MS.gene95201:intron | 35.0% | |
| TGTACCTATTCTCTTGTTCA+TGG | - | chr3.2:13443268-13443287 | MS.gene95201:CDS | 35.0% | |
| TGTTATTGACAACACCGAAT+AGG | - | chr3.2:13442235-13442254 | MS.gene95201:intron | 35.0% | |
| TGTTGTTGCTGGAAATTGTA+GGG | + | chr3.2:13440875-13440894 | None:intergenic | 35.0% | |
| TTATCTTAATTGGACCCACA+AGG | - | chr3.2:13443310-13443329 | MS.gene95201:CDS | 35.0% | |
| TTCGCATGAGATGTAATAGT+AGG | + | chr3.2:13442853-13442872 | None:intergenic | 35.0% | |
| ! | CAAAAGCCACAAAGTGATTT+TGG | - | chr3.2:13443491-13443510 | MS.gene95201:intron | 35.0% |
| ! | CCCGATTAAAGTATTTGTTG+CGG | + | chr3.2:13444987-13445006 | None:intergenic | 35.0% |
| ! | GATTAAAGTATTTGTTGCGG+TGG | + | chr3.2:13444984-13445003 | None:intergenic | 35.0% |
| ! | TTATGTTATGTCATTTGGGG+TGG | - | chr3.2:13441290-13441309 | MS.gene95201:CDS | 35.0% |
| ! | TTGATTTGATCCCGTATGTT+AGG | - | chr3.2:13442522-13442541 | MS.gene95201:intron | 35.0% |
| ! | TTGTGGCTTTTGCAAAATCA+CGG | + | chr3.2:13443483-13443502 | None:intergenic | 35.0% |
| ! | TTGTTGTTGCTGGAAATTGT+AGG | + | chr3.2:13440876-13440895 | None:intergenic | 35.0% |
| ! | TTTTTCGCAGTGGATAAGTA+AGG | + | chr3.2:13443574-13443593 | None:intergenic | 35.0% |
| !! | AGTGTTTTAAGTCGTGATTG+CGG | + | chr3.2:13441838-13441857 | None:intergenic | 35.0% |
| !! | CTATTCGGTGTTGTCAATAA+CGG | + | chr3.2:13441984-13442003 | None:intergenic | 35.0% |
| !! | TATTCGGTGTTGTCAATAAC+AGG | + | chr3.2:13441983-13442002 | None:intergenic | 35.0% |
| !! | TTCTTGGCAGCTTTTTGAAA+TGG | + | chr3.2:13444803-13444822 | None:intergenic | 35.0% |
| !!! | CTATAAATGGAGGGCATTTT+GGG | - | chr3.2:13443636-13443655 | MS.gene95201:intron | 35.0% |
| !!! | CTTCTTTGGTTTTGGTTGAT+CGG | + | chr3.2:13445029-13445048 | None:intergenic | 35.0% |
| !!! | TATTTTTTGCGATCCACGAT+TGG | - | chr3.2:13444498-13444517 | MS.gene95201:intron | 35.0% |
| AAACGTAAAGTTGTGGAAGG+AGG | - | chr3.2:13445076-13445095 | MS.gene95201:CDS | 40.0% | |
| AACACCGTTACGCTTGAATT+CGG | + | chr3.2:13444777-13444796 | None:intergenic | 40.0% | |
| AACCTACGAGTCACAAAAAG+TGG | + | chr3.2:13444717-13444736 | None:intergenic | 40.0% | |
| AAGTTCTGTTAAGTGGGTGT+TGG | - | chr3.2:13441495-13441514 | MS.gene95201:intron | 40.0% | |
| ACATGGCCACCACAAATTTA+TGG | - | chr3.2:13442676-13442695 | MS.gene95201:intron | 40.0% | |
| ATCCACTGCGAAAAAGTTAC+TGG | - | chr3.2:13443579-13443598 | MS.gene95201:intron | 40.0% | |
| ATTGCCGAATTCAAGCGTAA+CGG | - | chr3.2:13444770-13444789 | MS.gene95201:intron | 40.0% | |
| CAACACCGAATAGGACAATA+TGG | - | chr3.2:13441991-13442010 | MS.gene95201:intron | 40.0% | |
| CACTTCACATCTCAAAGCTT+TGG | + | chr3.2:13442743-13442762 | None:intergenic | 40.0% | |
| CCAGCAATTTGACTATGACA+TGG | - | chr3.2:13443699-13443718 | MS.gene95201:intron | 40.0% | |
| CCATGTCATAGTCAAATTGC+TGG | + | chr3.2:13443702-13443721 | None:intergenic | 40.0% | |
| CGATCAACCAAAACCAAAGA+AGG | - | chr3.2:13445027-13445046 | MS.gene95201:CDS | 40.0% | |
| CGATCTTTCTTGAAAGCTGT+AGG | - | chr3.2:13444090-13444109 | MS.gene95201:intron | 40.0% | |
| CGTTATTGACAACACCGAAT+AGG | - | chr3.2:13441982-13442001 | MS.gene95201:intron | 40.0% | |
| CTGTAGCAGATATAATGTCG+TGG | + | chr3.2:13443808-13443827 | None:intergenic | 40.0% | |
| CTTCTAATATTGCAGGCTGT+TGG | - | chr3.2:13442598-13442617 | MS.gene95201:intron | 40.0% | |
| CTTTACCCTATTGAACTGCA+AGG | - | chr3.2:13444658-13444677 | MS.gene95201:intron | 40.0% | |
| GAAGACAGGCTATAAATGGA+GGG | - | chr3.2:13443627-13443646 | MS.gene95201:intron | 40.0% | |
| GAGTGCTATCATTTCCTGTA+TGG | + | chr3.2:13444449-13444468 | None:intergenic | 40.0% | |
| GCTTGAATTCGGCAATAGAT+GGG | + | chr3.2:13444766-13444785 | None:intergenic | 40.0% | |
| GTCTCGTTGCCATAAATTTG+TGG | + | chr3.2:13442688-13442707 | None:intergenic | 40.0% | |
| GTGTTGTCAATAACGGTTAG+CGG | + | chr3.2:13441977-13441996 | None:intergenic | 40.0% | |
| TAGCTGGTTATGTGCATGTT+TGG | - | chr3.2:13443424-13443443 | MS.gene95201:CDS | 40.0% | |
| TATACCTCTGTAGTTAGCAG+AGG | + | chr3.2:13443831-13443850 | None:intergenic | 40.0% | |
| TCGTTGCCATAAATTTGTGG+TGG | + | chr3.2:13442685-13442704 | None:intergenic | 40.0% | |
| TGAAGACAGGCTATAAATGG+AGG | - | chr3.2:13443626-13443645 | MS.gene95201:intron | 40.0% | |
| TGGCGTGATTGTCATAATCA+GGG | - | chr3.2:13441710-13441729 | MS.gene95201:intron | 40.0% | |
| TTACGCCTTGCAGTTCAATA+GGG | + | chr3.2:13444666-13444685 | None:intergenic | 40.0% | |
| TTCCTGTATGGCCGTATATA+AGG | + | chr3.2:13444437-13444456 | None:intergenic | 40.0% | |
| TTTACGCCTTGCAGTTCAAT+AGG | + | chr3.2:13444667-13444686 | None:intergenic | 40.0% | |
| ! | AAGCTTTGGTGACTTTGGTT+TGG | + | chr3.2:13442729-13442748 | None:intergenic | 40.0% |
| ! | ATCAACCTGTTTCTTAGGCT+CGG | + | chr3.2:13442938-13442957 | None:intergenic | 40.0% |
| ! | CTGAGCAACCTTGATTTTCT+TGG | + | chr3.2:13444819-13444838 | None:intergenic | 40.0% |
| ! | GAGCTTGGTATTGTTGTTGA+GGG | + | chr3.2:13440850-13440869 | None:intergenic | 40.0% |
| ! | GCAGAATCAACCTGTTTCTT+AGG | + | chr3.2:13442943-13442962 | None:intergenic | 40.0% |
| ! | TAAAGTATTTGTTGCGGTGG+CGG | + | chr3.2:13444981-13445000 | None:intergenic | 40.0% |
| ! | TCAAGTTCTGATGCCTTCTT+TGG | + | chr3.2:13445043-13445062 | None:intergenic | 40.0% |
| ! | TCAATGGTGGCTTTTGTTAG+TGG | - | chr3.2:13441929-13441948 | MS.gene95201:intron | 40.0% |
| ! | TCTCAAAGCTTTGGTGACTT+TGG | + | chr3.2:13442734-13442753 | None:intergenic | 40.0% |
| ! | TGAGCTTGGTATTGTTGTTG+AGG | + | chr3.2:13440851-13440870 | None:intergenic | 40.0% |
| ! | TTGATAATCTGTTGGTTGGG+CGG | + | chr3.2:13441002-13441021 | None:intergenic | 40.0% |
| !! | GAAACAGGTTGATTCTGCAA+CGG | - | chr3.2:13442945-13442964 | MS.gene95201:intron | 40.0% |
| !! | TCTGATGCCTTCTTTGGTTT+TGG | + | chr3.2:13445037-13445056 | None:intergenic | 40.0% |
| !! | TTGGTGACTTTGGTTTGGTT+AGG | + | chr3.2:13442724-13442743 | None:intergenic | 40.0% |
| !!! | GCTATAAATGGAGGGCATTT+TGG | - | chr3.2:13443635-13443654 | MS.gene95201:intron | 40.0% |
| !!! | TTCCAGTAACTTTTTCGCAG+TGG | + | chr3.2:13443584-13443603 | None:intergenic | 40.0% |
| AAAACCAGTGTTGCCAATCG+TGG | + | chr3.2:13444514-13444533 | None:intergenic | 45.0% | |
| AAAATCGATGTCGGCACTAG+TGG | - | chr3.2:13444947-13444966 | MS.gene95201:intron | 45.0% | |
| AAGGCAAGATAGGATCACTG+TGG | - | chr3.2:13443329-13443348 | MS.gene95201:CDS | 45.0% | |
| ACATGCTGCTATGGTGAAGA+AGG | - | chr3.2:13445189-13445208 | MS.gene95201:CDS | 45.0% | |
| AGAAGATGCAGCTCCAAAAG+GGG | + | chr3.2:13444024-13444043 | None:intergenic | 45.0% | |
| AGGCAAGATAGGATCACTGT+GGG | - | chr3.2:13443330-13443349 | MS.gene95201:CDS | 45.0% | |
| AGTGATCCTATCTTGCCTTG+TGG | + | chr3.2:13443328-13443347 | None:intergenic | 45.0% | |
| AGTTTACCTTCTGCGTGGAA+TGG | - | chr3.2:13442652-13442671 | MS.gene95201:intron | 45.0% | |
| ATGACTGTGAGTGTTTCACG+TGG | - | chr3.2:13442292-13442311 | MS.gene95201:intron | 45.0% | |
| ATGGAACGATACCGCAATTC+TGG | - | chr3.2:13441690-13441709 | MS.gene95201:intron | 45.0% | |
| ATGGAATGATACCGCGATTG+TGG | - | chr3.2:13441594-13441613 | MS.gene95201:intron | 45.0% | |
| CAGAAGATGCAGCTCCAAAA+GGG | + | chr3.2:13444025-13444044 | None:intergenic | 45.0% | |
| CGCTTGAATTCGGCAATAGA+TGG | + | chr3.2:13444767-13444786 | None:intergenic | 45.0% | |
| CTGGCGTGATTGTCATAATC+AGG | - | chr3.2:13441709-13441728 | MS.gene95201:intron | 45.0% | |
| GAATTCAAGCGTAACGGTGT+TGG | - | chr3.2:13444776-13444795 | MS.gene95201:intron | 45.0% | |
| GACCTTATATACGGCCATAC+AGG | - | chr3.2:13444432-13444451 | MS.gene95201:intron | 45.0% | |
| GAGCAACTTGGGGAAAATGT+AGG | + | chr3.2:13444625-13444644 | None:intergenic | 45.0% | |
| GAGGATGAAGTGAAGGATCA+GGG | + | chr3.2:13440922-13440941 | None:intergenic | 45.0% | |
| GCTAGACACTACTGAAATCG+AGG | + | chr3.2:13443770-13443789 | None:intergenic | 45.0% | |
| GGAAATTGTAGGGTTGAGCT+TGG | + | chr3.2:13440865-13440884 | None:intergenic | 45.0% | |
| GGGTTGCCAAAATCACTTTG+TGG | + | chr3.2:13443500-13443519 | None:intergenic | 45.0% | |
| GTGATCCTATCTTGCCTTGT+GGG | + | chr3.2:13443327-13443346 | None:intergenic | 45.0% | |
| TCACCATAGCAGCATGTTTC+TGG | + | chr3.2:13445186-13445205 | None:intergenic | 45.0% | |
| TCAGAAGATGCAGCTCCAAA+AGG | + | chr3.2:13444026-13444045 | None:intergenic | 45.0% | |
| TGACAATCACGCCAGAATTG+CGG | + | chr3.2:13441704-13441723 | None:intergenic | 45.0% | |
| TGTAGCGACAATCGCAGTAT+CGG | + | chr3.2:13441749-13441768 | None:intergenic | 45.0% | |
| ! | GTTCTTCTGGAGATGAAGAC+AGG | - | chr3.2:13443613-13443632 | MS.gene95201:intron | 45.0% |
| !! | AGGCTTGTTGTTGTTGTTGC+TGG | + | chr3.2:13440886-13440905 | None:intergenic | 45.0% |
| !!! | CTAGTGCCGACATCGATTTT+TGG | + | chr3.2:13444947-13444966 | None:intergenic | 45.0% |
| !!! | GACCACTTTTTGTGACTCGT+AGG | - | chr3.2:13444712-13444731 | MS.gene95201:intron | 45.0% |
| AATGTCGTGGCGTGTCATAG+CGG | + | chr3.2:13443795-13443814 | None:intergenic | 50.0% | |
| ACAGCCTCTGCTAACTACAG+AGG | - | chr3.2:13443824-13443843 | MS.gene95201:intron | 50.0% | |
| AGGCTCGGATTGCTTGACTA+CGG | + | chr3.2:13442923-13442942 | None:intergenic | 50.0% | |
| CACGCAGAAGGTAAACTTGC+AGG | + | chr3.2:13442649-13442668 | None:intergenic | 50.0% | |
| CATGTACCATTCCACGCAGA+AGG | + | chr3.2:13442661-13442680 | None:intergenic | 50.0% | |
| CTGCAAGTTTACCTTCTGCG+TGG | - | chr3.2:13442647-13442666 | MS.gene95201:intron | 50.0% | |
| CTGCTATGGTGAAGAAGGCA+GGG | - | chr3.2:13445194-13445213 | MS.gene95201:CDS | 50.0% | |
| CTTCTGCGTGGAATGGTACA+TGG | - | chr3.2:13442659-13442678 | MS.gene95201:intron | 50.0% | |
| GACGCTTCTGACTTTCACTC+TGG | - | chr3.2:13442561-13442580 | MS.gene95201:intron | 50.0% | |
| GATCCTTCACTTCATCCTCC+TGG | - | chr3.2:13440923-13440942 | MS.gene95201:CDS | 50.0% | |
| GATTGTCGCTACAGCAAACG+AGG | - | chr3.2:13441756-13441775 | MS.gene95201:intron | 50.0% | |
| GCAATCCGAGCCTAAGAAAC+AGG | - | chr3.2:13442930-13442949 | MS.gene95201:intron | 50.0% | |
| GCGGTGTAAAGAGAAACAGG+AGG | + | chr3.2:13440983-13441002 | None:intergenic | 50.0% | |
| GGAGGATGAAGTGAAGGATC+AGG | + | chr3.2:13440923-13440942 | None:intergenic | 50.0% | |
| GTTGCAACGTTGACCACCAT+GGG | - | chr3.2:13443721-13443740 | MS.gene95201:intron | 50.0% | |
| TGACAATCACGCCACAATCG+CGG | + | chr3.2:13441608-13441627 | None:intergenic | 50.0% | |
| TGGCCAGAAACATGCTGCTA+TGG | - | chr3.2:13445180-13445199 | MS.gene95201:CDS | 50.0% | |
| TGGGCGGTGTAAAGAGAAAC+AGG | + | chr3.2:13440986-13441005 | None:intergenic | 50.0% | |
| TTGGACCCACAAGGCAAGAT+AGG | - | chr3.2:13443319-13443338 | MS.gene95201:CDS | 50.0% | |
| !! | ATGTGCATGTTTGGTGTCGC+TGG | - | chr3.2:13443433-13443452 | MS.gene95201:CDS | 50.0% |
| !! | CAGCATGTTTCTGGCCAACA+AGG | + | chr3.2:13445177-13445196 | None:intergenic | 50.0% |
| !! | GTGATTTTGGCAACCCACCA+TGG | - | chr3.2:13443504-13443523 | MS.gene95201:intron | 50.0% |
| !! | TCGGTACCTGGCTTTTCTTG+TGG | + | chr3.2:13445010-13445029 | None:intergenic | 50.0% |
| !! | TGTGCATGTTTGGTGTCGCT+GGG | - | chr3.2:13443434-13443453 | MS.gene95201:CDS | 50.0% |
| !!! | GGTTTTGGTTGATCGGTACC+TGG | + | chr3.2:13445022-13445041 | None:intergenic | 50.0% |
| AAGAAGGCAGGGTCAGTCAC+TGG | - | chr3.2:13445205-13445224 | MS.gene95201:CDS | 55.0% | |
| AGATCGTACAAGCCTGTCGC+AGG | + | chr3.2:13444076-13444095 | None:intergenic | 55.0% | |
| ATCGGGCCACAAGAAAAGCC+AGG | - | chr3.2:13445001-13445020 | MS.gene95201:intron | 55.0% | |
| CGATCCACGATTGGCAACAC+TGG | - | chr3.2:13444507-13444526 | MS.gene95201:intron | 55.0% | |
| GAAGGAGGAGCTGCAGTTGA+TGG | - | chr3.2:13445091-13445110 | MS.gene95201:CDS | 55.0% | |
| GCTGCTATGGTGAAGAAGGC+AGG | - | chr3.2:13445193-13445212 | MS.gene95201:CDS | 55.0% | |
| GGCTCGGATTGCTTGACTAC+GGG | + | chr3.2:13442922-13442941 | None:intergenic | 55.0% | |
| GGTTGCAACGTTGACCACCA+TGG | - | chr3.2:13443720-13443739 | MS.gene95201:intron | 55.0% | |
| GTGCCAGGAGGATGAAGTGA+AGG | + | chr3.2:13440929-13440948 | None:intergenic | 55.0% | |
| TTTGCAAGTGGGTCAGTGCC+AGG | + | chr3.2:13440944-13440963 | None:intergenic | 55.0% | |
| ! | AAACCATTGCCGGCCCCTTT+TGG | - | chr3.2:13444008-13444027 | MS.gene95201:intron | 55.0% |
| ! | AGTATTTGTTGCGGTGGCGG+TGG | + | chr3.2:13444978-13444997 | None:intergenic | 55.0% |
| ! | TGGGAGAAAGCATGCTGCTC+AGG | - | chr3.2:13443026-13443045 | MS.gene95201:CDS | 55.0% |
| ! | TTTTGACGTAGCGCCCATGG+TGG | + | chr3.2:13443737-13443756 | None:intergenic | 55.0% |
| !! | GCATTTTGACGTAGCGCCCA+TGG | + | chr3.2:13443740-13443759 | None:intergenic | 55.0% |
| AAGCCTGTCGCAGGTGTGCA+CGG | + | chr3.2:13444067-13444086 | None:intergenic | 60.0% | |
| ATACCGTGCACACCTGCGAC+AGG | - | chr3.2:13444061-13444080 | MS.gene95201:intron | 60.0% | |
| GATGCAGCTCCAAAAGGGGC+CGG | + | chr3.2:13444020-13444039 | None:intergenic | 60.0% | |
| GCAAGTGGGTCAGTGCCAGG+AGG | + | chr3.2:13440941-13440960 | None:intergenic | 65.0% | |
| GCTCCAAAAGGGGCCGGCAA+TGG | + | chr3.2:13444014-13444033 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 13440842 | 13445231 | 13440842 | ID=MS.gene95201 |
| chr3.2 | mRNA | 13440842 | 13445231 | 13440842 | ID=MS.gene95201.t1;Parent=MS.gene95201 |
| chr3.2 | exon | 13445010 | 13445231 | 13445010 | ID=MS.gene95201.t1.exon1;Parent=MS.gene95201.t1 |
| chr3.2 | CDS | 13445010 | 13445231 | 13445010 | ID=cds.MS.gene95201.t1;Parent=MS.gene95201.t1 |
| chr3.2 | exon | 13443026 | 13443460 | 13443026 | ID=MS.gene95201.t1.exon2;Parent=MS.gene95201.t1 |
| chr3.2 | CDS | 13443026 | 13443460 | 13443026 | ID=cds.MS.gene95201.t1;Parent=MS.gene95201.t1 |
| chr3.2 | exon | 13440842 | 13441339 | 13440842 | ID=MS.gene95201.t1.exon3;Parent=MS.gene95201.t1 |
| chr3.2 | CDS | 13440842 | 13441339 | 13440842 | ID=cds.MS.gene95201.t1;Parent=MS.gene95201.t1 |
| Gene Sequence |
| Protein sequence |
