Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95317.t1 | XP_013463768.1 | 100 | 99 | 0 | 0 | 1 | 99 | 324 | 422 | 2.00E-42 | 181.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95317.t1 | F4JT76 | 60.2 | 98 | 37 | 2 | 2 | 97 | 344 | 441 | 4.4e-22 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95317.t1 | A0A072V8X8 | 100.0 | 99 | 0 | 0 | 1 | 99 | 324 | 422 | 1.5e-42 | 181.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059439 | MS.gene95317 | 0.803874 | 2.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATATTTATCAAAACA+CGG | - | 8570:4418-4437 | MS.gene95317:intergenic | 10.0% |
| !! | TAATGATGAAATAAAATAAA+TGG | + | 8570:3160-3179 | MS.gene95317:intron | 10.0% |
| !!! | TGTATTTTTTGAATTAAAAA+AGG | + | 8570:3098-3117 | MS.gene95317:intron | 10.0% |
| !!! | TTTTTAACATCTTTTATATT+AGG | - | 8570:2791-2810 | MS.gene95317:intergenic | 10.0% |
| !! | AACATTACAAATTCATAATA+AGG | + | 8570:2976-2995 | MS.gene95317:intron | 15.0% |
| !! | CAAAAAAAATTACCATTTAA+AGG | - | 8570:2911-2930 | MS.gene95317:intergenic | 15.0% |
| !! | TGAAATAAAATAAATGGAAA+AGG | + | 8570:3166-3185 | MS.gene95317:intron | 15.0% |
| !! | TTATTATGAATTTGTAATGT+TGG | - | 8570:2977-2996 | MS.gene95317:intergenic | 15.0% |
| !!! | TAGTTCATCAATTATTTTTA+TGG | - | 8570:4839-4858 | MS.gene95317:intergenic | 15.0% |
| !!! | TTCTGTTATTATATTTTCTT+GGG | + | 8570:4385-4404 | MS.gene95317:intron | 15.0% |
| !!! | TTTCTGTTATTATATTTTCT+TGG | + | 8570:4384-4403 | MS.gene95317:intron | 15.0% |
| !! | AAAATAAACTGAAAAGCTTT+AGG | - | 8570:5496-5515 | MS.gene95317:intergenic | 20.0% |
| !! | AAGTTAAACTTAAATCTTCA+TGG | - | 8570:5369-5388 | MS.gene95317:intergenic | 20.0% |
| !! | AATAAATGGAAAAGGAAAAA+AGG | + | 8570:3174-3193 | MS.gene95317:intron | 20.0% |
| !! | AATTTGTAATGTTGGATTAT+TGG | - | 8570:2969-2988 | MS.gene95317:intergenic | 20.0% |
| !! | AGTTAAACTTAAATCTTCAT+GGG | - | 8570:5368-5387 | MS.gene95317:intergenic | 20.0% |
| !! | ATAAATGGAAAAGGAAAAAA+GGG | + | 8570:3175-3194 | MS.gene95317:intron | 20.0% |
| !! | ATTTGGAAAAAAAAAAGTTG+TGG | - | 8570:3336-3355 | MS.gene95317:intergenic | 20.0% |
| !! | TAATTCAAAAAATACACAGA+TGG | - | 8570:3094-3113 | MS.gene95317:intergenic | 20.0% |
| !! | TAATTCTATAAATACACACA+TGG | - | 8570:3129-3148 | MS.gene95317:intergenic | 20.0% |
| !! | TACACGACATATATATATAA+GGG | + | 8570:2849-2868 | MS.gene95317:intron | 20.0% |
| !! | TACCATTATTATGTTATAGA+GGG | + | 8570:2635-2654 | MS.gene95317:intron | 20.0% |
| !! | TATATATATATGTCGTGTAA+AGG | - | 8570:2848-2867 | MS.gene95317:intergenic | 20.0% |
| !! | TTACACGACATATATATATA+AGG | + | 8570:2848-2867 | MS.gene95317:intron | 20.0% |
| !! | TTACCATTATTATGTTATAG+AGG | + | 8570:2634-2653 | MS.gene95317:intron | 20.0% |
| !!! | GTTATTCTTTTGTATTTTTG+AGG | + | 8570:4706-4725 | MS.gene95317:intron | 20.0% |
| !!! | TAATAAGATGAAAGTATAGA+TGG | - | 8570:5103-5122 | MS.gene95317:intergenic | 20.0% |
| !!! | TTTATGGTTTTCTTATTTTC+AGG | + | 8570:5661-5680 | MS.gene95317:intron | 20.0% |
| ! | AAATGAGAGAGATTCAAAAT+GGG | - | 8570:3557-3576 | MS.gene95317:intergenic | 25.0% |
| ! | ACAATTACAGTCCATTAATT+AGG | + | 8570:5051-5070 | MS.gene95317:intron | 25.0% |
| ! | ACTTGAGAAAGAAAATCAAA+AGG | - | 8570:3658-3677 | MS.gene95317:intergenic | 25.0% |
| ! | ATAAAAGAGACAACAAAAAG+AGG | - | 8570:2578-2597 | MS.gene95317:intergenic | 25.0% |
| ! | ATCAGAGATAAAAACAAAGA+TGG | + | 8570:3753-3772 | MS.gene95317:intron | 25.0% |
| ! | ATCCTAAATTACGAATGTTA+GGG | - | 8570:5422-5441 | MS.gene95317:intergenic | 25.0% |
| ! | CAATTTCTATATCATGTCAT+GGG | + | 8570:4628-4647 | MS.gene95317:intron | 25.0% |
| ! | GAATCGTAAACATATCTTAT+AGG | - | 8570:5474-5493 | MS.gene95317:intergenic | 25.0% |
| ! | TAAATGGAAAAGGAAAAAAG+GGG | + | 8570:3176-3195 | MS.gene95317:intron | 25.0% |
| ! | TACCCTCTATAACATAATAA+TGG | - | 8570:2640-2659 | MS.gene95317:intergenic | 25.0% |
| ! | TATCCTAAATTACGAATGTT+AGG | - | 8570:5423-5442 | MS.gene95317:intergenic | 25.0% |
| ! | TCAATTTCTATATCATGTCA+TGG | + | 8570:4627-4646 | MS.gene95317:intron | 25.0% |
| ! | TGTAAGGGATATAAATGAAT+TGG | + | 8570:5221-5240 | MS.gene95317:intron | 25.0% |
| ! | TTCGAAAAACATGAGTTTAA+AGG | + | 8570:4103-4122 | MS.gene95317:intron | 25.0% |
| ! | TTCTTCATGTAAAATGTAGT+TGG | + | 8570:2673-2692 | MS.gene95317:intron | 25.0% |
| ! | TTGAAATAAGTATAAGTAGC+AGG | + | 8570:4223-4242 | MS.gene95317:intron | 25.0% |
| !! | AAAGTGGACATAAATTTTTG+TGG | - | 8570:3527-3546 | MS.gene95317:intergenic | 25.0% |
| !! | AAATTAGTGTTTTGCAAAAG+AGG | - | 8570:3045-3064 | MS.gene95317:intergenic | 25.0% |
| !! | AAGTGGACATAAATTTTTGT+GGG | - | 8570:3526-3545 | MS.gene95317:intergenic | 25.0% |
| !! | ATTAAGATTTCACGTTTTGT+GGG | + | 8570:5442-5461 | MS.gene95317:intron | 25.0% |
| !! | ATTTTATATGAATCTTGTGC+TGG | + | 8570:2596-2615 | MS.gene95317:intron | 25.0% |
| !! | TAAATTTTTGTGGGTAGTTA+AGG | - | 8570:3517-3536 | MS.gene95317:intergenic | 25.0% |
| !! | TATTAAGATTTCACGTTTTG+TGG | + | 8570:5441-5460 | MS.gene95317:intron | 25.0% |
| !!! | AAGTTATTTTATGTGGAGTT+GGG | + | 8570:5014-5033 | MS.gene95317:intron | 25.0% |
| !!! | TTTAGCTTGTTTTGGTTTTA+TGG | + | 8570:5645-5664 | MS.gene95317:intron | 25.0% |
| AAGTCTAAACTCTTCTTTGT+TGG | + | 8570:4186-4205 | MS.gene95317:intron | 30.0% | |
| ACAAAGAAGAGTTTAGACTT+TGG | - | 8570:4186-4205 | MS.gene95317:intergenic | 30.0% | |
| ACAAAGAAGATGTATAACTG+AGG | - | 8570:3483-3502 | MS.gene95317:intergenic | 30.0% | |
| ATAAGTAGCAGGATAAATGA+AGG | + | 8570:4234-4253 | MS.gene95317:intron | 30.0% | |
| ATTACAGTCCATTAATTAGG+TGG | + | 8570:5054-5073 | MS.gene95317:intron | 30.0% | |
| ATTGAAATGAGAAAGGAAAG+AGG | + | 8570:3724-3743 | MS.gene95317:intron | 30.0% | |
| CAAAAGAATAACTAGTTGCA+TGG | - | 8570:4698-4717 | MS.gene95317:intergenic | 30.0% | |
| CAAATGAGAGAGATTCAAAA+TGG | - | 8570:3558-3577 | MS.gene95317:intergenic | 30.0% | |
| GAGATAAAAACAAAGATGGA+TGG | + | 8570:3757-3776 | MS.gene95317:intron | 30.0% | |
| GCATAAAGATGAAACTTTCA+AGG | - | 8570:4884-4903 | MS.gene95317:intergenic | 30.0% | |
| GTGTTTACAAATCACTATGA+CGG | - | 8570:4750-4769 | MS.gene95317:intergenic | 30.0% | |
| TATGAAAATCCCTTTCACTA+TGG | - | 8570:4025-4044 | MS.gene95317:intergenic | 30.0% | |
| TCCTAAATTACGAATGTTAG+GGG | - | 8570:5421-5440 | MS.gene95317:intergenic | 30.0% | |
| TTGAAATGAGAAAGGAAAGA+GGG | + | 8570:3725-3744 | MS.gene95317:intron | 30.0% | |
| ! | CATAGTGATTTGTAAACACT+TGG | + | 8570:4751-4770 | MS.gene95317:intron | 30.0% |
| ! | CATTTTGAATCTCTCTCATT+TGG | + | 8570:3556-3575 | MS.gene95317:intron | 30.0% |
| ! | GAAGATTTTTCATCAACCAA+AGG | - | 8570:4667-4686 | MS.gene95317:intergenic | 30.0% |
| ! | GATATTATACTATTTTCCCC+AGG | + | 8570:5597-5616 | MS.gene95317:intron | 30.0% |
| ! | TTAAGATTTCACGTTTTGTG+GGG | + | 8570:5443-5462 | MS.gene95317:intron | 30.0% |
| ! | TTCTAGAAGCTAAAAGAACA+AGG | - | 8570:5531-5550 | MS.gene95317:intergenic | 30.0% |
| ! | TTTTCTTTCTCAAGTTCAAG+AGG | + | 8570:3663-3682 | MS.gene95317:intron | 30.0% |
| !! | AAATCACTATGACGGATAAA+AGG | - | 8570:4742-4761 | MS.gene95317:intergenic | 30.0% |
| !! | ACTTCCAAATAGGTTTGTTA+GGG | + | 8570:4134-4153 | MS.gene95317:intron | 30.0% |
| !! | ATTAATGGACTGTAATTGTG+CGG | - | 8570:5050-5069 | MS.gene95317:intergenic | 30.0% |
| !! | ATTTTGAGTCACAAAAGTGT+GGG | - | 8570:3373-3392 | MS.gene95317:intergenic | 30.0% |
| !! | CAAGTTATTTTATGTGGAGT+TGG | + | 8570:5013-5032 | MS.gene95317:intron | 30.0% |
| !! | CACTCTTTAAGACCTTTAAA+TGG | + | 8570:2896-2915 | MS.gene95317:intron | 30.0% |
| !! | GAGAAGACTATCTTTGAAAT+TGG | - | 8570:4531-4550 | MS.gene95317:intergenic | 30.0% |
| !! | TGGCAACAAGTTATTTTATG+TGG | + | 8570:5007-5026 | MS.gene95317:intron | 30.0% |
| !!! | GCAAAACACTAATTTTGACT+TGG | + | 8570:3050-3069 | MS.gene95317:intron | 30.0% |
| !!! | GGCAAATTTATTTTGATTCC+AGG | - | 8570:5347-5366 | MS.gene95317:intergenic | 30.0% |
| !!! | TGTGATGTTTTGAAGTTTTG+AGG | + | 8570:4444-4463 | MS.gene95317:intron | 30.0% |
| !!! | TTCTGGAATTTAGCTTGTTT+TGG | + | 8570:5637-5656 | MS.gene95317:intron | 30.0% |
| AAAAAAAGTTGTGGATGAGC+TGG | - | 8570:3327-3346 | MS.gene95316:intergenic | 35.0% | |
| AAAAGAGGCTAAATGAAGAG+GGG | - | 8570:3030-3049 | MS.gene95316:intergenic | 35.0% | |
| AAAGTGTAGAGATCAAAGGA+GGG | + | 8570:3782-3801 | MS.gene95317:intron | 35.0% | |
| AAATAGTGCATGTGCATGTT+AGG | - | 8570:5256-5275 | MS.gene95317:intergenic | 35.0% | |
| AACTTTGCCTGGTTATGATT+AGG | - | 8570:4494-4513 | MS.gene95317:intergenic | 35.0% | |
| AATAGTGCATGTGCATGTTA+GGG | - | 8570:5255-5274 | MS.gene95317:intergenic | 35.0% | |
| AATTGGAGAGTTGTGGTTTA+TGG | - | 8570:3280-3299 | MS.gene95317:intergenic | 35.0% | |
| ACATAAACCACAACCCTAAT+AGG | + | 8570:3612-3631 | MS.gene95317:intron | 35.0% | |
| AGGTATACTCTACGAATCAA+CGG | - | 8570:2771-2790 | MS.gene95317:intergenic | 35.0% | |
| ATACATAGTTTACTGCTCTG+TGG | - | 8570:5163-5182 | MS.gene95317:intergenic | 35.0% | |
| ATCAGATGAGCAACCTATTA+GGG | - | 8570:3628-3647 | MS.gene95317:intergenic | 35.0% | |
| ATCTCTACCTAATCATAACC+AGG | + | 8570:4484-4503 | MS.gene95317:intron | 35.0% | |
| ATGAGGATAAGATAAGAGAC+AGG | + | 8570:4791-4810 | MS.gene95317:intron | 35.0% | |
| ATTTGTAAACACTTGGCAGT+TGG | + | 8570:4758-4777 | MS.gene95317:intron | 35.0% | |
| CAAAAGAGGCTAAATGAAGA+GGG | - | 8570:3031-3050 | MS.gene95317:intergenic | 35.0% | |
| CAATCCCTAACAAACCTATT+TGG | - | 8570:4141-4160 | MS.gene95317:intergenic | 35.0% | |
| CATTCTAATTGTGCTATGTG+AGG | + | 8570:4938-4957 | MS.gene95317:intron | 35.0% | |
| CCTAAATTACGAATGTTAGG+GGG | - | 8570:5420-5439 | MS.gene95317:intergenic | 35.0% | |
| GACTCTGATTGAAATGAGAA+AGG | + | 8570:3717-3736 | MS.gene95317:intron | 35.0% | |
| GAGTTTCAGGAGAATTACAT+TGG | - | 8570:4909-4928 | MS.gene95317:intergenic | 35.0% | |
| GGGAGTTTGAATAATACCTT+TGG | + | 8570:4648-4667 | MS.gene95317:intron | 35.0% | |
| GTAGAGAGAATGAAGGAAAA+GGG | - | 8570:3433-3452 | MS.gene95317:intergenic | 35.0% | |
| TAAGCAAGCCAATTACAGTA+GGG | - | 8570:4553-4572 | MS.gene95317:intergenic | 35.0% | |
| TAGAGAGAATGAAGGAAAAG+GGG | - | 8570:3432-3451 | MS.gene95317:intergenic | 35.0% | |
| TATGGTTGCTGCTATATTGA+TGG | - | 8570:3262-3281 | MS.gene95317:intergenic | 35.0% | |
| TCAAGTTCAAGAGGAACAAA+AGG | + | 8570:3672-3691 | MS.gene95317:intron | 35.0% | |
| TCATTGTGCATTTGTGCTTA+AGG | - | 8570:4278-4297 | MS.gene95317:intergenic | 35.0% | |
| TCCTAAGACTCATTCAAGAA+AGG | - | 8570:5568-5587 | MS.gene95317:intergenic | 35.0% | |
| TCCTTTCTTGAATGAGTCTT+AGG | + | 8570:5564-5583 | MS.gene95317:intron | 35.0% | |
| TCTCAAAATGTTATGTTGCG+TGG | + | 8570:4352-4371 | MS.gene95317:intron | 35.0% | |
| TGCTATATTGATGGAGGTTA+GGG | - | 8570:3253-3272 | MS.gene95317:intergenic | 35.0% | |
| TGTATAACTGAGGTTAGATG+AGG | - | 8570:3473-3492 | MS.gene95317:intergenic | 35.0% | |
| TGTGGTCTGTACTACAAAAA+GGG | - | 8570:5145-5164 | MS.gene95317:intergenic | 35.0% | |
| TTAAAACCTGATACTGCACA+GGG | - | 8570:4077-4096 | MS.gene95317:intergenic | 35.0% | |
| TTAAAGTGAACTGTACTGTC+AGG | + | 8570:2702-2721 | MS.gene95317:intron | 35.0% | |
| TTAGGGTTGTGGTTTATGTT+TGG | - | 8570:3611-3630 | MS.gene95317:intergenic | 35.0% | |
| TTTCTTCTTCTAACTTTGCC+TGG | - | 8570:4505-4524 | MS.gene95317:intergenic | 35.0% | |
| ! | ACAAAGTATTCCAAATTCCC+CGG | + | 8570:5393-5412 | MS.gene95317:intron | 35.0% |
| ! | AGATGAAAGTATAGATGGCA+TGG | - | 8570:5098-5117 | MS.gene95317:intergenic | 35.0% |
| ! | ATGAAAGTATAGATGGCATG+GGG | - | 8570:5096-5115 | MS.gene95317:intergenic | 35.0% |
| ! | CGAGAGTATAGGTAAAATCT+CGG | + | 8570:2740-2759 | MS.gene95317:intron | 35.0% |
| ! | GACTTCCAAATAGGTTTGTT+AGG | + | 8570:4133-4152 | MS.gene95317:intron | 35.0% |
| ! | GATGAAAGTATAGATGGCAT+GGG | - | 8570:5097-5116 | MS.gene95317:intergenic | 35.0% |
| ! | TTTAAAACCTGATACTGCAC+AGG | - | 8570:4078-4097 | MS.gene95317:intergenic | 35.0% |
| ! | TTTGAAACTTTGAACTCGTG+AGG | + | 8570:3830-3849 | MS.gene95317:intron | 35.0% |
| !! | CAAAATGGGTTGATGAAAAG+TGG | - | 8570:3543-3562 | MS.gene95317:intergenic | 35.0% |
| !! | CAACCAAGTTTTATCCATCT+AGG | + | 8570:5195-5214 | MS.gene95317:intron | 35.0% |
| !! | CAGTTGGTAACAGATATATG+AGG | + | 8570:4774-4793 | MS.gene95317:intron | 35.0% |
| !! | GACAACAAAAAGAGGTGTTA+AGG | - | 8570:2570-2589 | MS.gene95317:intergenic | 35.0% |
| !! | GATTTTGAGTCACAAAAGTG+TGG | - | 8570:3374-3393 | MS.gene95317:intergenic | 35.0% |
| !! | TAGTCGAAAACTTGGTTTTC+TGG | + | 8570:5620-5639 | MS.gene95317:intron | 35.0% |
| AAAGAGGCTAAATGAAGAGG+GGG | - | 8570:3029-3048 | MS.gene95316:intergenic | 40.0% | |
| AACAGCCACCACCTAATTAA+TGG | - | 8570:5065-5084 | MS.gene95317:intergenic | 40.0% | |
| AACTTTGAACTCGTGAGGAT+TGG | + | 8570:3835-3854 | MS.gene95317:intron | 40.0% | |
| ACAGTCCATTAATTAGGTGG+TGG | + | 8570:5057-5076 | MS.gene95317:intron | 40.0% | |
| ACTGAGGTTAGATGAGGTAT+TGG | - | 8570:3467-3486 | MS.gene95317:intergenic | 40.0% | |
| ACTTTGAACTCGTGAGGATT+GGG | + | 8570:3836-3855 | MS.gene95317:intron | 40.0% | |
| AGTCTTCTCCCTACTGTAAT+TGG | + | 8570:4542-4561 | MS.gene95317:CDS | 40.0% | |
| CAAAGTGTAGAGATCAAAGG+AGG | + | 8570:3781-3800 | MS.gene95317:intron | 40.0% | |
| CACAATTAGAATGAATCGCG+AGG | - | 8570:4931-4950 | MS.gene95317:intergenic | 40.0% | |
| CATCAGATGAGCAACCTATT+AGG | - | 8570:3629-3648 | MS.gene95317:intergenic | 40.0% | |
| CCACCTAGATGGATAAAACT+TGG | - | 8570:5201-5220 | MS.gene95317:intergenic | 40.0% | |
| CCCCCTAACATTCGTAATTT+AGG | + | 8570:5417-5436 | MS.gene95317:intron | 40.0% | |
| CTAAGCAAGCCAATTACAGT+AGG | - | 8570:4554-4573 | MS.gene95317:intergenic | 40.0% | |
| CTGCTATATTGATGGAGGTT+AGG | - | 8570:3254-3273 | MS.gene95317:intergenic | 40.0% | |
| CTGTGGTCTGTACTACAAAA+AGG | - | 8570:5146-5165 | MS.gene95317:intergenic | 40.0% | |
| GAAAATCCCTTTCACTATGG+AGG | - | 8570:4022-4041 | MS.gene95317:intergenic | 40.0% | |
| GATTTCAGCTTCTCAAGCAT+AGG | - | 8570:4334-4353 | MS.gene95317:intergenic | 40.0% | |
| GCAAAAGAGGCTAAATGAAG+AGG | - | 8570:3032-3051 | MS.gene95317:intergenic | 40.0% | |
| GGTAGAGAGAATGAAGGAAA+AGG | - | 8570:3434-3453 | MS.gene95317:intergenic | 40.0% | |
| GGTCAAAGTGTAGAGATCAA+AGG | + | 8570:3778-3797 | MS.gene95317:intron | 40.0% | |
| GTAAGAGACGCATCAATGAA+TGG | - | 8570:5306-5325 | MS.gene95317:intergenic | 40.0% | |
| GTAGTGAAAGGGGATGAAAT+TGG | - | 8570:3297-3316 | MS.gene95317:intergenic | 40.0% | |
| TAATTGTGCTATGTGAGGCA+TGG | + | 8570:4943-4962 | MS.gene95317:intron | 40.0% | |
| TATCCATCTAGGTGGTGTAA+GGG | + | 8570:5206-5225 | MS.gene95317:intron | 40.0% | |
| TCATTGATGCGTCTCTTACT+TGG | + | 8570:5307-5326 | MS.gene95317:intron | 40.0% | |
| TTATCCATCTAGGTGGTGTA+AGG | + | 8570:5205-5224 | MS.gene95317:intron | 40.0% | |
| TTTGAAAGCAGAGCTGTGTT+GGG | - | 8570:3588-3607 | MS.gene95317:intergenic | 40.0% | |
| ! | AAACCAAGTTTTCGACTACC+TGG | - | 8570:5618-5637 | MS.gene95317:intergenic | 40.0% |
| ! | AACCAAGTTTTCGACTACCT+GGG | - | 8570:5617-5636 | MS.gene95317:intergenic | 40.0% |
| ! | AAGGTGAGTTGACTCACAAA+TGG | + | 8570:3807-3826 | MS.gene95317:intron | 40.0% |
| ! | AGGAAAAATCGTCTGAGATC+TGG | + | 8570:4811-4830 | MS.gene95317:intron | 40.0% |
| ! | ATCTTTTCCGTTCATCAGCA+GGG | - | 8570:2513-2532 | MS.gene95317:intergenic | 40.0% |
| ! | CAAACTCTAGTCGAGAGTAT+AGG | + | 8570:2729-2748 | MS.gene95317:intron | 40.0% |
| ! | CTGAGGTTAGATGAGGTATT+GGG | - | 8570:3466-3485 | MS.gene95317:intergenic | 40.0% |
| ! | GGAGTGTTTGACTTCCAAAT+AGG | + | 8570:4124-4143 | MS.gene95317:intron | 40.0% |
| ! | TCAGAATCGGAGTTCTTTTC+TGG | + | 8570:5794-5813 | MS.gene95317:CDS | 40.0% |
| ! | TCAGAGTCACTTTCTGTTTC+TGG | - | 8570:3705-3724 | MS.gene95317:intergenic | 40.0% |
| !! | CCAAGTTTTATCCATCTAGG+TGG | + | 8570:5198-5217 | MS.gene95317:intron | 40.0% |
| !! | TCAGTTGGTAGAGAGAATGA+AGG | - | 8570:3440-3459 | MS.gene95317:intergenic | 40.0% |
| !! | TTATAGAGGGTACTGTCACA+GGG | + | 8570:2648-2667 | MS.gene95317:intron | 40.0% |
| AAATGTTAACGAGTTCCCCC+GGG | + | 8570:2872-2891 | MS.gene95317:intron | 45.0% | |
| AACCGTCCTCCATAGTGAAA+GGG | + | 8570:4013-4032 | MS.gene95317:intron | 45.0% | |
| AACTGGAAGCAACTCAGCAA+CGG | - | 8570:5759-5778 | MS.gene95317:intergenic | 45.0% | |
| AAGAGGCTAAATGAAGAGGG+GGG | - | 8570:3028-3047 | MS.gene95317:intergenic | 45.0% | |
| AATGAAGGAAAAGGGGTTGG+TGG | - | 8570:3425-3444 | MS.gene95317:intergenic | 45.0% | |
| AATGAATCGCGAGGAGTTTC+AGG | - | 8570:4922-4941 | MS.gene95317:intergenic | 45.0% | |
| ATCCCTTTCACTATGGAGGA+CGG | - | 8570:4018-4037 | MS.gene95317:intergenic | 45.0% | |
| ATTACGAATGTTAGGGGGAC+CGG | - | 8570:5415-5434 | MS.gene95317:intergenic | 45.0% | |
| ATTGATGGAGGTTAGGGAGA+GGG | - | 8570:3247-3266 | MS.gene95317:intergenic | 45.0% | |
| CGATAGATCCTCAGAACAGA+GGG | - | 8570:5695-5714 | MS.gene95317:intergenic | 45.0% | |
| CTAAACTTCCCTCTGTTCTG+AGG | + | 8570:5684-5703 | MS.gene95317:CDS | 45.0% | |
| CTGGTGAACGTGTAGTGAAA+GGG | - | 8570:3308-3327 | MS.gene95317:intergenic | 45.0% | |
| GAAATGTTAACGAGTTCCCC+CGG | + | 8570:2871-2890 | MS.gene95317:intron | 45.0% | |
| GAGAATCGAATCTGCGATAG+AGG | + | 8570:3861-3880 | MS.gene95317:intron | 45.0% | |
| GAGAATGAAGGAAAAGGGGT+TGG | - | 8570:3428-3447 | MS.gene95317:intergenic | 45.0% | |
| GGAATCTGAAAACCTTGGAG+TGG | + | 8570:4964-4983 | MS.gene95317:intron | 45.0% | |
| GGCATGGAATCTGAAAACCT+TGG | + | 8570:4959-4978 | MS.gene95317:intron | 45.0% | |
| GGGATGAAATTGGAGAGTTG+TGG | - | 8570:3287-3306 | MS.gene95317:intergenic | 45.0% | |
| GGTTGCTGCTATATTGATGG+AGG | - | 8570:3259-3278 | MS.gene95317:intergenic | 45.0% | |
| GTACTACAAAAAGGGCTTCG+AGG | - | 8570:5137-5156 | MS.gene95317:intergenic | 45.0% | |
| GTTTGAAAGCAGAGCTGTGT+TGG | - | 8570:3589-3608 | MS.gene95317:intergenic | 45.0% | |
| TAGAGATCAAAGGAGGGAGA+AGG | + | 8570:3788-3807 | MS.gene95317:intron | 45.0% | |
| TAGAGGACTTGGAATTGGCA+TGG | + | 8570:3878-3897 | MS.gene95317:intron | 45.0% | |
| TATCCCTTACACCACCTAGA+TGG | - | 8570:5212-5231 | MS.gene95317:intergenic | 45.0% | |
| TATTGATGGAGGTTAGGGAG+AGG | - | 8570:3248-3267 | MS.gene95317:intergenic | 45.0% | |
| TCGATAGATCCTCAGAACAG+AGG | - | 8570:5696-5715 | MS.gene95317:intergenic | 45.0% | |
| TGAGCAACCTATTAGGGTTG+TGG | - | 8570:3622-3641 | MS.gene95317:intergenic | 45.0% | |
| TGATGCGTCTCTTACTTGGA+GGG | + | 8570:5311-5330 | MS.gene95317:intron | 45.0% | |
| TGCGATAGAGGACTTGGAAT+TGG | + | 8570:3873-3892 | MS.gene95317:intron | 45.0% | |
| TGGTGAACGTGTAGTGAAAG+GGG | - | 8570:3307-3326 | MS.gene95317:intergenic | 45.0% | |
| TTGAGAGAGAGGAAAGGAGA+TGG | - | 8570:3224-3243 | MS.gene95317:intergenic | 45.0% | |
| TTGATGCGTCTCTTACTTGG+AGG | + | 8570:5310-5329 | MS.gene95317:intron | 45.0% | |
| ! | ACCAAGTTTTCGACTACCTG+GGG | - | 8570:5616-5635 | MS.gene95317:intergenic | 45.0% |
| ! | CATCTTTTCCGTTCATCAGC+AGG | - | 8570:2514-2533 | MS.gene95317:intergenic | 45.0% |
| ! | GGGTGGGTTTATGAGTCATT+TGG | - | 8570:3353-3372 | MS.gene95317:intergenic | 45.0% |
| ! | TGAGTCACAAAAGTGTGGGT+GGG | - | 8570:3369-3388 | MS.gene95317:intergenic | 45.0% |
| ! | TTGAGTCACAAAAGTGTGGG+TGG | - | 8570:3370-3389 | MS.gene95317:intergenic | 45.0% |
| !! | AAAGGTCTTAAAGAGTGCCC+CGG | - | 8570:2893-2912 | MS.gene95317:intergenic | 45.0% |
| !! | GTTATAGAGGGTACTGTCAC+AGG | + | 8570:2647-2666 | MS.gene95317:intron | 45.0% |
| !! | TGAGGTATTGGGTGTTCAGT+TGG | - | 8570:3455-3474 | MS.gene95317:intergenic | 45.0% |
| !! | TTGGAGGGAATTTGTTGACC+TGG | + | 8570:5326-5345 | MS.gene95317:intron | 45.0% |
| !! | TTTAATATTATTTGTATATT+AGG | - | 8570:2823-2842 | MS.gene95317:intergenic | 5.0% |
| AAAGCAGAGCTGTGTTGGGA+AGG | - | 8570:3584-3603 | MS.gene95316:intergenic | 50.0% | |
| AAGCAGAGCTGTGTTGGGAA+GGG | - | 8570:3583-3602 | MS.gene95317:intergenic | 50.0% | |
| AATGTTAACGAGTTCCCCCG+GGG | + | 8570:2873-2892 | MS.gene95317:intron | 50.0% | |
| ACTTGGAATTGGCATGGACG+GGG | + | 8570:3884-3903 | MS.gene95317:intron | 50.0% | |
| AGAGCTTCCCTGCTGATGAA+CGG | + | 8570:2503-2522 | MS.gene95317:CDS | 50.0% | |
| AGAGGCTAAATGAAGAGGGG+GGG | - | 8570:3027-3046 | MS.gene95317:intergenic | 50.0% | |
| AGAGGGTTGAGAGAGAGGAA+AGG | - | 8570:3230-3249 | MS.gene95317:intergenic | 50.0% | |
| CCATTAGCCGATGGTAGAAC+CGG | + | 8570:3924-3943 | MS.gene95317:intron | 50.0% | |
| CGAATCTGCGATAGAGGACT+TGG | + | 8570:3867-3886 | MS.gene95317:intron | 50.0% | |
| CTTTGCGATTCTGACCACCA+CGG | - | 8570:3975-3994 | MS.gene95317:intergenic | 50.0% | |
| GAACCGCACCCATTCACTTA+CGG | - | 8570:3953-3972 | MS.gene95317:intergenic | 50.0% | |
| GAACCGTCCTCCATAGTGAA+AGG | + | 8570:4012-4031 | MS.gene95317:intron | 50.0% | |
| GAAGCTCGAGCAGCAATAAC+TGG | - | 8570:5776-5795 | MS.gene95317:intergenic | 50.0% | |
| GACTTGGAATTGGCATGGAC+GGG | + | 8570:3883-3902 | MS.gene95317:intron | 50.0% | |
| GAGAGGAAAGGAGATGGTGA+AGG | - | 8570:3218-3237 | MS.gene95317:intergenic | 50.0% | |
| GCTGGTGAACGTGTAGTGAA+AGG | - | 8570:3309-3328 | MS.gene95317:intergenic | 50.0% | |
| GGACTTGGAATTGGCATGGA+CGG | + | 8570:3882-3901 | MS.gene95317:intron | 50.0% | |
| GTGGTGGTCAGAATCGCAAA+GGG | + | 8570:3974-3993 | MS.gene95317:intron | 50.0% | |
| TATGGAGGACGGTTCTACCA+TGG | - | 8570:4007-4026 | MS.gene95317:intergenic | 50.0% | |
| TCCCCAGGTAGTCGAAAACT+TGG | + | 8570:5612-5631 | MS.gene95317:intron | 50.0% | |
| TCTTTGCCCTGTGCAGTATC+AGG | + | 8570:4068-4087 | MS.gene95317:intron | 50.0% | |
| TGCTGCTCGAGCTTCAGAAT+CGG | + | 8570:5781-5800 | MS.gene95317:CDS | 50.0% | |
| TGGTGGTCAGAATCGCAAAG+GGG | + | 8570:3975-3994 | MS.gene95317:intron | 50.0% | |
| TGTTGCCAAGACTACCTGTG+CGG | - | 8570:4995-5014 | MS.gene95317:intergenic | 50.0% | |
| TTACGAATGTTAGGGGGACC+GGG | - | 8570:5414-5433 | MS.gene95317:intergenic | 50.0% | |
| ! | TTCTGGAGACAGAGCTGTAG+AGG | + | 8570:5811-5830 | MS.gene95317:CDS | 50.0% |
| !! | AAGGTCTTAAAGAGTGCCCC+GGG | - | 8570:2892-2911 | MS.gene95317:intergenic | 50.0% |
| !! | GTTGGTGGTGGTTGAGGAAT+GGG | - | 8570:3410-3429 | MS.gene95317:intergenic | 50.0% |
| AACCGGCCTCCGTAAGTGAA+TGG | + | 8570:3941-3960 | MS.gene95317:intron | 55.0% | |
| ACCCATTCACTTACGGAGGC+CGG | - | 8570:3946-3965 | MS.gene95317:intergenic | 55.0% | |
| ACCGGCCTCCGTAAGTGAAT+GGG | + | 8570:3942-3961 | MS.gene95317:intron | 55.0% | |
| AGGCTAAATGAAGAGGGGGG+GGG | - | 8570:3025-3044 | MS.gene95317:intergenic | 55.0% | |
| ATCGGCTAATGGAGCCTCCA+TGG | - | 8570:3916-3935 | MS.gene95317:intergenic | 55.0% | |
| ATGGAGGCTCCATTAGCCGA+TGG | + | 8570:3915-3934 | MS.gene95317:intron | 55.0% | |
| CCTCCGTAAGTGAATGGGTG+CGG | + | 8570:3947-3966 | MS.gene95317:intron | 55.0% | |
| CGTGGTGGTCAGAATCGCAA+AGG | + | 8570:3973-3992 | MS.gene95317:intron | 55.0% | |
| CTTGGAATTGGCATGGACGG+GGG | + | 8570:3885-3904 | MS.gene95317:intron | 55.0% | |
| GAGGCTAAATGAAGAGGGGG+GGG | - | 8570:3026-3045 | MS.gene95317:intergenic | 55.0% | |
| GGTGGTCAGAATCGCAAAGG+GGG | + | 8570:3976-3995 | MS.gene95317:intron | 55.0% | |
| TACGAATGTTAGGGGGACCG+GGG | - | 8570:5413-5432 | MS.gene95317:intergenic | 55.0% | |
| TAGGGAGAGGGTTGAGAGAG+AGG | - | 8570:3235-3254 | MS.gene95317:intergenic | 55.0% | |
| ! | CCGGTTCTACCATCGGCTAA+TGG | - | 8570:3927-3946 | MS.gene95317:intergenic | 55.0% |
| !! | AAAGGGGTTGGTGGTGGTTG+AGG | - | 8570:3416-3435 | MS.gene95317:intergenic | 55.0% |
| !! | AGGTCTTAAAGAGTGCCCCG+GGG | - | 8570:2891-2910 | MS.gene95317:intergenic | 55.0% |
| !! | GAAGGAAAAGGGGTTGGTGG+TGG | - | 8570:3422-3441 | MS.gene95317:intergenic | 55.0% |
| !! | GGTTGGTGGTGGTTGAGGAA+TGG | - | 8570:3411-3430 | MS.gene95317:intergenic | 55.0% |
| AGTGAATGGGTGCGGTTCCG+TGG | + | 8570:3955-3974 | MS.gene95317:intron | 60.0% | |
| CAGAGCCGCACAGGTAGTCT+TGG | + | 8570:4987-5006 | MS.gene95317:intron | 60.0% | |
| CATGGACGGGGGTGAAACCA+TGG | + | 8570:3896-3915 | MS.gene95317:intron | 60.0% | |
| CCGCACCCATTCACTTACGG+AGG | - | 8570:3950-3969 | MS.gene95317:intergenic | 60.0% | |
| CTAAATGAAGAGGGGGGGGG+GGG | - | 8570:3022-3041 | MS.gene95317:intergenic | 60.0% | |
| GCTAAATGAAGAGGGGGGGG+GGG | - | 8570:3023-3042 | MS.gene95317:intergenic | 60.0% | |
| GGAGGACGGTTCTACCATGG+TGG | - | 8570:4004-4023 | MS.gene95317:intergenic | 60.0% | |
| GGCTAAATGAAGAGGGGGGG+GGG | - | 8570:3024-3043 | MS.gene95317:intergenic | 60.0% | |
| GTTAGGGGGACCGGGGAATT+TGG | - | 8570:5406-5425 | MS.gene95317:intergenic | 60.0% | |
| TAAATGAAGAGGGGGGGGGG+GGG | - | 8570:3021-3040 | MS.gene95317:intergenic | 60.0% | |
| TCGCAAAGGGGGAACCACCA+TGG | + | 8570:3987-4006 | MS.gene95317:intron | 60.0% | |
| ! | ACGGAGGCCGGTTCTACCAT+CGG | - | 8570:3934-3953 | MS.gene95317:intergenic | 60.0% |
| ! | GGTGGTGGTTGAGGAATGGG+TGG | - | 8570:3407-3426 | MS.gene95317:intergenic | 60.0% |
| !! | GGTCTTAAAGAGTGCCCCGG+GGG | - | 8570:2890-2909 | MS.gene95317:intergenic | 60.0% |
| AAATGAAGAGGGGGGGGGGG+GGG | - | 8570:3020-3039 | MS.gene95317:intergenic | 65.0% | |
| GAATGGGTGCGGTTCCGTGG+TGG | + | 8570:3958-3977 | MS.gene95317:intron | 65.0% | |
| GGACGGGGGTGAAACCATGG+AGG | + | 8570:3899-3918 | MS.gene95317:intron | 65.0% | |
| TGTGCGGCTCTGCCACTCCA+AGG | - | 8570:4979-4998 | MS.gene95317:intergenic | 65.0% | |
| TTGGAGTGGCAGAGCCGCAC+AGG | + | 8570:4978-4997 | MS.gene95317:intron | 65.0% | |
| AATGAAGAGGGGGGGGGGGG+GGG | - | 8570:3019-3038 | MS.gene95317:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8570 | gene | 2468 | 5839 | 2468 | ID=MS.gene95317 |
| 8570 | mRNA | 2468 | 5839 | 2468 | ID=MS.gene95317.t1;Parent=MS.gene95317 |
| 8570 | exon | 2468 | 2538 | 2468 | ID=MS.gene95317.t1.exon1;Parent=MS.gene95317.t1 |
| 8570 | CDS | 2468 | 2538 | 2468 | ID=cds.MS.gene95317.t1;Parent=MS.gene95317.t1 |
| 8570 | exon | 4506 | 4577 | 4506 | ID=MS.gene95317.t1.exon2;Parent=MS.gene95317.t1 |
| 8570 | CDS | 4506 | 4577 | 4506 | ID=cds.MS.gene95317.t1;Parent=MS.gene95317.t1 |
| 8570 | exon | 5683 | 5839 | 5683 | ID=MS.gene95317.t1.exon3;Parent=MS.gene95317.t1 |
| 8570 | CDS | 5683 | 5839 | 5683 | ID=cds.MS.gene95317.t1;Parent=MS.gene95317.t1 |
| Gene Sequence |
| Protein sequence |
