AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene95387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95387.t1 MTR_3g058610 89.820 334 28 2 1 329 1 333 0.0 617
MS.gene95387.t1 MTR_8g075890 78.144 334 67 2 1 329 1 333 0.0 555
MS.gene95387.t1 MTR_8g075830 78.443 334 66 2 1 329 1 333 0.0 551
MS.gene95387.t1 MTR_5g022020 73.112 331 83 2 1 326 1 330 0.0 514
MS.gene95387.t1 MTR_8g024120 39.274 303 165 6 4 299 12 302 2.80e-69 220
MS.gene95387.t1 MTR_3g092890 37.231 325 185 9 16 331 15 329 5.93e-63 203
MS.gene95387.t1 MTR_3g063180 35.374 294 173 5 20 301 25 313 8.86e-62 201
MS.gene95387.t1 MTR_7g062550 35.799 338 203 9 3 331 21 353 1.27e-61 201
MS.gene95387.t1 MTR_3g070860 36.050 319 191 7 13 321 23 338 4.64e-61 199
MS.gene95387.t1 MTR_5g082750 36.923 325 180 8 13 321 22 337 2.95e-60 197
MS.gene95387.t1 MTR_7g068650 36.246 309 165 8 15 301 25 323 3.10e-60 197
MS.gene95387.t1 MTR_7g062600 35.988 339 202 10 3 331 12 345 4.77e-60 196
MS.gene95387.t1 MTR_4g015790 36.278 317 165 7 14 301 23 331 1.41e-59 196
MS.gene95387.t1 MTR_7g062580 34.891 321 197 8 18 331 33 348 1.41e-59 195
MS.gene95387.t1 MTR_7g062570 35.423 319 194 8 20 331 35 348 2.04e-59 195
MS.gene95387.t1 MTR_1g062110 35.762 302 162 8 11 299 50 332 4.39e-57 189
MS.gene95387.t1 MTR_2g437380 35.690 297 173 8 15 300 27 316 1.48e-55 185
MS.gene95387.t1 MTR_7g081710 33.788 293 182 8 14 299 23 310 3.77e-53 178
MS.gene95387.t1 MTR_5g059130 35.254 295 175 7 14 299 18 305 5.71e-52 175
MS.gene95387.t1 MTR_7g016080 33.333 297 172 9 14 301 14 293 2.17e-51 173
MS.gene95387.t1 MTR_3g072820 33.673 294 179 5 15 299 17 303 2.34e-51 173
MS.gene95387.t1 MTR_7g063730 31.361 338 218 8 3 331 25 357 4.56e-51 173
MS.gene95387.t1 MTR_5g059140 33.226 310 183 8 4 299 6 305 5.64e-51 172
MS.gene95387.t1 MTR_5g032870 34.122 296 181 6 15 300 14 305 8.18e-51 172
MS.gene95387.t1 MTR_5g032880 33.742 326 195 8 15 330 352 666 1.06e-50 179
MS.gene95387.t1 MTR_5g032880 33.231 325 190 7 15 330 14 320 4.11e-50 177
MS.gene95387.t1 MTR_7g102820 34.164 281 162 7 37 299 64 339 3.48e-50 171
MS.gene95387.t1 MTR_3g083370 34.586 266 164 5 38 299 2 261 1.37e-49 168
MS.gene95387.t1 MTR_5g085330 35.361 263 160 5 41 299 6 262 1.37e-49 168
MS.gene95387.t1 MTR_7g016090 35.793 271 155 8 40 301 39 299 2.28e-49 168
MS.gene95387.t1 MTR_3g026150 33.779 299 184 8 40 330 60 352 2.42e-49 169
MS.gene95387.t1 MTR_7g016090 35.793 271 155 8 40 301 41 301 2.44e-49 168
MS.gene95387.t1 MTR_1g070080 33.333 294 179 6 15 299 13 298 2.89e-49 168
MS.gene95387.t1 MTR_5g055900 30.547 311 204 7 28 331 35 340 9.63e-49 167
MS.gene95387.t1 MTR_3g091350 36.531 271 153 7 40 299 59 321 1.32e-48 167
MS.gene95387.t1 MTR_4g117880 35.106 282 163 8 19 290 41 312 1.41e-48 167
MS.gene95387.t1 MTR_8g064200 32.042 284 181 6 24 300 36 314 1.42e-48 166
MS.gene95387.t1 MTR_8g064200 32.042 284 181 6 24 300 41 319 1.64e-48 166
MS.gene95387.t1 MTR_5g048470 32.463 268 171 5 39 300 52 315 2.55e-48 166
MS.gene95387.t1 MTR_7g045650 38.017 242 139 7 39 274 59 295 2.61e-48 165
MS.gene95387.t1 MTR_3g072810 34.448 299 176 7 12 300 13 301 3.63e-48 165
MS.gene95387.t1 MTR_2g069010 32.734 278 170 6 20 288 48 317 4.89e-48 166
MS.gene95387.t1 MTR_1g070135 32.558 301 185 8 15 306 14 305 6.07e-48 164
MS.gene95387.t1 MTR_3g091360 35.424 271 156 7 40 299 52 314 1.02e-47 164
MS.gene95387.t1 MTR_1g033810 32.787 305 186 6 4 300 17 310 1.54e-47 164
MS.gene95387.t1 MTR_5g011250 34.114 299 175 7 19 297 17 313 1.74e-47 164
MS.gene95387.t1 MTR_1g034140 32.039 309 186 6 16 307 4 305 2.84e-47 163
MS.gene95387.t1 MTR_8g074050 31.250 272 177 5 36 300 48 316 3.92e-47 162
MS.gene95387.t1 MTR_4g087090 31.104 299 189 4 18 301 10 306 4.41e-47 162
MS.gene95387.t1 MTR_8g009080 36.078 255 151 4 40 288 94 342 6.94e-47 163
MS.gene95387.t1 MTR_5g055680 31.090 312 201 8 28 331 35 340 7.40e-47 162
MS.gene95387.t1 MTR_1g062110 35.632 261 136 8 11 258 50 291 8.33e-47 161
MS.gene95387.t1 MTR_6g015950 32.602 319 195 9 14 322 14 322 9.48e-47 161
MS.gene95387.t1 MTR_1g070085 33.663 303 185 8 9 301 4 300 1.24e-46 161
MS.gene95387.t1 MTR_1g070085 33.663 303 185 8 9 301 4 300 1.24e-46 161
MS.gene95387.t1 MTR_5g048550 30.420 286 190 5 21 299 24 307 1.51e-46 161
MS.gene95387.t1 MTR_4g093840 32.647 340 200 11 4 323 23 353 2.32e-46 161
MS.gene95387.t1 MTR_1g093140 31.502 273 170 4 40 301 73 339 3.38e-46 161
MS.gene95387.t1 MTR_5g065010 33.882 304 168 9 8 299 19 301 4.38e-46 159
MS.gene95387.t1 MTR_2g072890 32.721 272 174 5 36 301 48 316 4.65e-46 160
MS.gene95387.t1 MTR_1g102070 35.740 277 157 7 39 299 58 329 5.31e-46 160
MS.gene95387.t1 MTR_1g048940 29.932 294 187 7 2 288 16 297 5.59e-46 160
MS.gene95387.t1 MTR_2g025120 32.707 266 169 5 38 299 2 261 5.93e-46 159
MS.gene95387.t1 MTR_8g063070 33.808 281 148 5 30 288 51 315 6.46e-46 160
MS.gene95387.t1 MTR_1g070120 30.492 305 184 8 6 299 11 298 7.13e-46 159
MS.gene95387.t1 MTR_1g034120 29.545 308 193 4 16 301 4 309 9.92e-46 159
MS.gene95387.t1 MTR_8g008930 33.459 266 161 5 31 288 53 310 1.52e-45 159
MS.gene95387.t1 MTR_1g070185 31.399 293 177 6 20 301 49 328 3.42e-45 158
MS.gene95387.t1 MTR_0009s0050 30.619 307 199 8 33 331 40 340 3.65e-45 157
MS.gene95387.t1 MTR_0009s0480 32.601 273 173 4 33 299 39 306 3.92e-45 157
MS.gene95387.t1 MTR_0009s0050 30.619 307 199 8 33 331 40 340 4.69e-45 157
MS.gene95387.t1 MTR_3g088565 33.445 299 185 8 40 331 3 294 5.32e-45 156
MS.gene95387.t1 MTR_3g117420 29.682 283 188 7 36 310 48 327 6.73e-45 157
MS.gene95387.t1 MTR_1g034060 29.221 308 194 4 16 301 4 309 7.14e-45 157
MS.gene95387.t1 MTR_1g093110 32.941 255 159 3 40 288 70 318 9.78e-45 157
MS.gene95387.t1 MTR_5g048850 31.295 278 180 4 28 299 35 307 1.06e-44 156
MS.gene95387.t1 MTR_2g068950 32.632 285 175 6 10 288 38 311 1.56e-44 156
MS.gene95387.t1 MTR_8g074070 31.250 272 177 6 36 300 48 316 1.56e-44 156
MS.gene95387.t1 MTR_1g093120 32.210 267 160 5 31 288 61 315 1.74e-44 156
MS.gene95387.t1 MTR_2g069060 34.066 273 167 5 36 301 45 311 1.80e-44 155
MS.gene95387.t1 MTR_7g029655 35.581 267 150 7 40 293 67 324 2.34e-44 156
MS.gene95387.t1 MTR_0328s0030 32.014 278 178 4 28 299 33 305 3.00e-44 155
MS.gene95387.t1 MTR_8g009110 35.000 260 149 8 40 288 60 310 3.65e-44 155
MS.gene95387.t1 MTR_7g056347 33.457 269 155 6 40 296 67 323 5.72e-44 155
MS.gene95387.t1 MTR_8g009090 35.448 268 152 8 31 288 53 309 1.29e-43 154
MS.gene95387.t1 MTR_2g069090 35.019 257 152 6 40 288 68 317 1.99e-43 153
MS.gene95387.t1 MTR_8g062600 34.902 255 154 3 40 288 67 315 2.73e-43 153
MS.gene95387.t1 MTR_5g048570 29.667 300 199 7 39 331 44 338 4.21e-43 152
MS.gene95387.t1 MTR_5g055820 29.642 307 203 7 33 331 40 341 6.18e-43 152
MS.gene95387.t1 MTR_3g117485 31.022 274 178 5 36 300 45 316 6.92e-43 151
MS.gene95387.t1 MTR_3g117485 33.195 241 151 4 68 300 6 244 8.07e-43 149
MS.gene95387.t1 MTR_2g072910 31.599 269 175 5 39 301 50 315 8.32e-43 151
MS.gene95387.t1 MTR_4g024660 34.630 257 152 5 40 288 67 315 8.76e-43 152
MS.gene95387.t1 MTR_0032s0040 35.000 260 147 6 40 288 70 318 9.73e-43 152
MS.gene95387.t1 MTR_4g087120 29.739 306 193 8 16 301 4 307 1.04e-42 151
MS.gene95387.t1 MTR_8g009160 33.074 257 157 5 40 288 60 309 1.31e-42 151
MS.gene95387.t1 MTR_8g028435 32.463 268 160 8 31 288 53 309 1.38e-42 151
MS.gene95387.t1 MTR_2g068960 31.522 276 176 6 20 288 42 311 1.71e-42 151
MS.gene95387.t1 MTR_2g069020 32.549 255 160 4 40 288 67 315 1.94e-42 150
MS.gene95387.t1 MTR_4g087110 29.677 310 188 7 16 301 4 307 4.63e-42 149
MS.gene95387.t1 MTR_2g069190 35.659 258 148 4 40 288 68 316 4.89e-42 150
MS.gene95387.t1 MTR_2g069020 32.549 255 160 4 40 288 67 315 5.92e-42 150
MS.gene95387.t1 MTR_5g055690 30.619 307 200 8 33 331 40 341 9.79e-42 149
MS.gene95387.t1 MTR_4g087140 29.316 307 194 8 16 301 4 308 1.03e-41 148
MS.gene95387.t1 MTR_6g464620 36.800 250 144 5 62 299 87 334 1.45e-41 149
MS.gene95387.t1 MTR_2g068840 31.868 273 170 7 39 300 54 321 2.16e-41 148
MS.gene95387.t1 MTR_2g069210 33.203 256 157 5 40 288 64 312 2.87e-41 147
MS.gene95387.t1 MTR_4g116010 31.660 259 163 5 40 291 50 301 2.55e-40 145
MS.gene95387.t1 MTR_3g045230 31.985 272 155 6 40 297 56 311 4.00e-40 144
MS.gene95387.t1 MTR_5g048740 32.197 264 167 5 33 289 38 296 7.74e-40 143
MS.gene95387.t1 MTR_8g009170 30.798 263 164 7 36 288 56 310 9.43e-40 144
MS.gene95387.t1 MTR_2g102570 32.411 253 150 6 62 299 66 312 1.60e-39 143
MS.gene95387.t1 MTR_2g437380 36.986 219 127 5 90 300 7 222 2.61e-39 140
MS.gene95387.t1 MTR_4g087100 28.852 305 195 7 16 300 4 306 4.25e-39 141
MS.gene95387.t1 MTR_1g081840 32.070 343 198 12 10 322 16 353 5.68e-39 142
MS.gene95387.t1 MTR_5g055800 29.670 273 175 5 28 291 35 299 6.67e-39 141
MS.gene95387.t1 MTR_1g043810 33.455 275 160 8 40 301 54 318 6.87e-39 141
MS.gene95387.t1 MTR_2g069060 35.088 228 136 4 36 257 23 244 1.50e-38 137
MS.gene95387.t1 MTR_1g043770 34.351 262 153 5 36 288 49 300 1.97e-38 140
MS.gene95387.t1 MTR_3g026150 34.008 247 152 6 92 330 6 249 2.41e-38 137
MS.gene95387.t1 MTR_8g009080 35.714 224 132 4 40 257 94 311 2.95e-38 139
MS.gene95387.t1 MTR_8g009080 35.714 224 132 4 40 257 94 311 3.03e-38 139
MS.gene95387.t1 MTR_7g062560 29.524 315 210 7 19 331 41 345 3.05e-38 139
MS.gene95387.t1 MTR_3g043900 31.136 273 155 7 40 297 56 310 3.16e-38 139
MS.gene95387.t1 MTR_7g102720 31.868 273 172 5 34 300 31 295 3.46e-38 139
MS.gene95387.t1 MTR_7g105070 32.069 290 165 8 15 288 34 307 5.12e-38 139
MS.gene95387.t1 MTR_1g043775 33.455 275 160 8 40 301 54 318 5.48e-38 139
MS.gene95387.t1 MTR_8g074070 30.147 272 161 7 36 300 48 297 5.84e-38 138
MS.gene95387.t1 MTR_8g041620 31.655 278 174 8 20 288 48 318 6.83e-38 139
MS.gene95387.t1 MTR_2g069300 33.205 259 154 8 40 288 54 303 7.97e-38 138
MS.gene95387.t1 MTR_8g033380 32.792 308 185 9 9 301 25 325 1.13e-37 138
MS.gene95387.t1 MTR_7g451860 30.483 269 168 6 39 297 40 299 1.42e-37 137
MS.gene95387.t1 MTR_7g047670 30.483 269 168 6 39 297 40 299 1.42e-37 137
MS.gene95387.t1 MTR_1g043760 33.725 255 156 4 40 288 54 301 1.72e-37 137
MS.gene95387.t1 MTR_1g011580 33.582 268 158 6 40 299 63 318 1.13e-36 135
MS.gene95387.t1 MTR_8g041600 29.893 281 175 7 20 288 48 318 3.50e-36 134
MS.gene95387.t1 MTR_3g096500 31.293 294 165 7 41 308 67 349 4.06e-36 134
MS.gene95387.t1 MTR_1g032140 31.611 329 202 10 15 331 40 357 7.47e-36 133
MS.gene95387.t1 MTR_3g026150 31.679 262 155 9 5 256 30 277 2.44e-35 130
MS.gene95387.t1 MTR_1g070135 31.076 251 155 8 15 256 14 255 3.81e-35 129
MS.gene95387.t1 MTR_1g032250 32.056 287 178 7 15 293 47 324 4.18e-35 131
MS.gene95387.t1 MTR_3g088745 32.716 324 175 12 39 328 35 349 4.69e-35 131
MS.gene95387.t1 MTR_0009s0480 32.035 231 146 4 33 257 39 264 5.33e-35 129
MS.gene95387.t1 MTR_3g083370 34.375 224 137 5 38 257 2 219 5.62e-35 127
MS.gene95387.t1 MTR_1g070100 38.202 178 107 3 124 301 44 218 9.17e-35 127
MS.gene95387.t1 MTR_1g070085 38.202 178 107 3 124 301 48 222 1.25e-34 127
MS.gene95387.t1 MTR_8g006930 32.453 265 163 7 40 296 67 323 3.75e-34 129
MS.gene95387.t1 MTR_2g019370 30.657 274 167 8 45 300 25 293 5.73e-34 127
MS.gene95387.t1 MTR_1g032220 30.195 308 197 8 33 331 66 364 5.86e-34 128
MS.gene95387.t1 MTR_5g048850 30.508 236 153 4 28 257 35 265 6.73e-34 126
MS.gene95387.t1 MTR_2g083000 30.189 265 171 4 39 297 32 288 7.40e-34 127
MS.gene95387.t1 MTR_7g078010 34.586 266 156 8 40 296 67 323 1.22e-33 127
MS.gene95387.t1 MTR_0009s0050 31.364 220 146 5 115 331 25 242 1.32e-33 124
MS.gene95387.t1 MTR_0009s0050 31.364 220 146 5 115 331 25 242 1.44e-33 124
MS.gene95387.t1 MTR_2g025120 32.889 225 141 5 38 258 2 220 1.69e-33 123
MS.gene95387.t1 MTR_2g068800 30.579 242 145 7 39 275 54 277 3.24e-33 124
MS.gene95387.t1 MTR_5g005570 29.520 271 173 6 39 301 36 296 3.99e-33 125
MS.gene95387.t1 MTR_1g086550 30.164 305 173 9 18 300 7 293 4.21e-33 125
MS.gene95387.t1 MTR_7g056393 33.205 259 153 4 40 288 67 315 4.61e-33 126
MS.gene95387.t1 MTR_8g469400 33.463 257 142 7 40 288 67 302 5.71e-33 125
MS.gene95387.t1 MTR_6g092620 30.370 270 168 8 40 299 3 262 6.24e-33 124
MS.gene95387.t1 MTR_4g119410 31.179 263 169 4 40 296 67 323 9.08e-33 125
MS.gene95387.t1 MTR_4g115990 30.795 302 179 9 30 329 36 309 1.34e-32 124
MS.gene95387.t1 MTR_8g009170 30.172 232 144 7 36 257 56 279 2.21e-32 122
MS.gene95387.t1 MTR_4g074130 28.239 301 200 9 29 324 29 318 2.48e-32 123
MS.gene95387.t1 MTR_0056s0160 32.086 187 123 3 115 299 8 192 4.32e-32 120
MS.gene95387.t1 MTR_2g070870 28.571 252 160 7 62 300 42 286 4.74e-32 122
MS.gene95387.t1 MTR_5g055690 32.328 232 145 7 33 257 40 266 1.43e-31 119
MS.gene95387.t1 MTR_2g033270 29.286 280 182 8 50 318 23 297 1.50e-31 120
MS.gene95387.t1 MTR_2g083030 28.148 270 175 5 37 297 34 293 3.27e-31 120
MS.gene95387.t1 MTR_1g043770 34.632 231 132 5 36 257 49 269 3.31e-31 119
MS.gene95387.t1 MTR_2g072910 30.222 225 148 5 39 257 50 271 6.85e-31 118
MS.gene95387.t1 MTR_8g041600 30.000 250 153 7 20 257 48 287 7.63e-31 118
MS.gene95387.t1 MTR_8g461330 28.070 285 165 10 39 300 26 293 8.59e-31 119
MS.gene95387.t1 MTR_4g123020 30.450 289 171 10 28 299 6 281 9.90e-31 119
MS.gene95387.t1 MTR_3g040410 29.431 299 192 8 40 326 6 297 1.45e-30 118
MS.gene95387.t1 MTR_1g043810 33.333 228 132 7 40 257 54 271 3.76e-30 117
MS.gene95387.t1 MTR_1g043775 33.333 228 132 7 40 257 54 271 2.64e-29 114
MS.gene95387.t1 MTR_4g087130 27.869 305 199 7 16 301 4 306 6.58e-29 114
MS.gene95387.t1 MTR_8g009150 28.571 259 147 7 40 288 60 290 1.11e-28 113
MS.gene95387.t1 MTR_7g077670 28.620 297 192 6 36 318 7 297 1.33e-28 113
MS.gene95387.t1 MTR_1g070110 30.942 223 114 5 84 299 4 193 1.78e-28 110
MS.gene95387.t1 MTR_8g009120 29.921 254 158 5 40 288 60 298 2.11e-28 113
MS.gene95387.t1 MTR_0009s0050 35.185 162 101 4 172 331 1 160 2.14e-28 108
MS.gene95387.t1 MTR_8g093980 29.210 291 180 9 37 308 56 339 1.19e-27 111
MS.gene95387.t1 MTR_7g078010 35.242 227 129 8 40 257 67 284 1.88e-27 109
MS.gene95387.t1 MTR_7g056353 36.207 174 103 3 116 288 123 289 4.23e-27 111
MS.gene95387.t1 MTR_8g030880 26.645 304 201 7 37 322 2 301 7.24e-27 108
MS.gene95387.t1 MTR_8g102600 27.097 310 182 9 45 323 12 308 4.67e-26 106
MS.gene95387.t1 MTR_5g025090 26.275 255 172 7 38 288 3 245 8.98e-26 104
MS.gene95387.t1 MTR_4g132770 42.857 105 57 2 196 299 29 131 1.24e-25 100
MS.gene95387.t1 MTR_8g093930 28.727 275 171 8 40 297 47 313 4.35e-25 104
MS.gene95387.t1 MTR_6g088665 29.389 262 157 8 62 297 38 297 6.42e-25 103
MS.gene95387.t1 MTR_4g096840 26.545 275 185 8 47 307 28 299 7.33e-25 103
MS.gene95387.t1 MTR_6g088665 28.626 262 160 7 62 297 38 298 7.35e-25 103
MS.gene95387.t1 MTR_4g011720 29.658 263 171 6 56 313 27 280 3.68e-24 100
MS.gene95387.t1 MTR_8g009180 39.535 129 74 3 161 288 114 239 4.00e-24 100
MS.gene95387.t1 MTR_5g025050 25.000 288 200 8 38 321 3 278 2.47e-23 98.2
MS.gene95387.t1 MTR_4g011690 31.061 264 167 7 56 313 27 281 5.74e-23 97.4
MS.gene95387.t1 MTR_3g464530 24.727 275 176 8 37 297 31 288 1.59e-22 96.3
MS.gene95387.t1 MTR_1g027290 24.359 312 204 9 36 326 25 325 5.69e-22 95.1
MS.gene95387.t1 MTR_1g043840 36.842 133 82 1 156 288 54 184 9.44e-22 94.4
MS.gene95387.t1 MTR_0009s0400 43.299 97 52 2 196 291 1 95 1.05e-21 90.1
MS.gene95387.t1 MTR_4g100600 26.978 278 173 10 40 297 9 276 1.41e-21 93.6
MS.gene95387.t1 MTR_1g032240 43.564 101 45 3 194 293 59 148 4.66e-21 89.0
MS.gene95387.t1 MTR_4g100590 27.076 277 169 8 40 297 9 271 1.06e-19 88.2
MS.gene95387.t1 MTR_5g025060 23.762 303 189 10 35 329 1 269 5.61e-19 85.9
MS.gene95387.t1 MTR_8g102600 27.306 271 153 9 84 323 1 258 7.62e-19 85.5
MS.gene95387.t1 MTR_5g027230 26.068 234 162 6 59 288 20 246 1.78e-18 84.7
MS.gene95387.t1 MTR_1g027310 25.271 277 148 11 36 299 45 275 6.87e-18 83.2
MS.gene95387.t1 MTR_3g108520 28.622 283 169 10 36 297 3 273 1.01e-16 80.1
MS.gene95387.t1 MTR_4g021360 23.881 268 193 7 39 297 6 271 8.52e-15 74.3
MS.gene95387.t1 MTR_3g464530 24.255 235 147 8 37 257 31 248 2.52e-14 72.0
MS.gene95387.t1 MTR_7g090520 25.606 289 183 11 40 313 10 281 2.66e-13 70.1
MS.gene95387.t1 MTR_7g056370 29.801 151 86 4 41 180 47 188 2.73e-13 68.6
MS.gene95387.t1 MTR_3g040440 45.070 71 37 1 208 278 14 82 8.98e-13 67.8
MS.gene95387.t1 MTR_4g100600 25.217 230 143 9 40 249 9 229 2.27e-12 66.2
MS.gene95387.t1 MTR_4g094900 27.273 198 121 7 57 235 33 226 9.94e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene95387.t1 AT3G51240 73.054 334 83 3 1 329 1 332 0.0 512
MS.gene95387.t1 AT3G51240 75.806 248 55 1 87 329 1 248 5.20e-142 402
MS.gene95387.t1 AT4G10490 35.976 328 190 7 4 322 12 328 6.47e-67 214
MS.gene95387.t1 AT4G10500 36.897 290 172 5 16 299 20 304 1.57e-66 213
MS.gene95387.t1 AT5G24530 36.747 332 188 9 12 331 11 332 6.44e-65 208
MS.gene95387.t1 AT4G16330 39.194 273 147 7 39 301 66 329 8.61e-62 201
MS.gene95387.t1 AT2G38240 37.793 299 166 9 15 301 22 312 1.74e-58 192
MS.gene95387.t1 AT3G11180 36.667 300 171 7 15 301 66 359 3.49e-58 193
MS.gene95387.t1 AT3G11180 36.667 300 171 7 15 301 66 359 4.09e-58 192
MS.gene95387.t1 AT5G05600 36.577 298 176 6 14 301 36 330 5.50e-58 191
MS.gene95387.t1 AT3G55970 35.548 301 178 7 15 301 24 322 3.68e-54 181
MS.gene95387.t1 AT1G78550 32.237 304 195 6 6 301 17 317 4.16e-54 181
MS.gene95387.t1 AT3G19010 33.775 302 183 5 16 301 4 304 6.19e-53 177
MS.gene95387.t1 AT3G19010 33.775 302 183 5 16 301 4 304 6.19e-53 177
MS.gene95387.t1 AT1G55290 33.681 288 174 7 36 314 58 337 1.29e-51 174
MS.gene95387.t1 AT4G16330 39.732 224 123 5 87 300 1 222 5.86e-51 170
MS.gene95387.t1 AT2G36690 35.766 274 151 11 37 296 58 320 4.07e-50 171
MS.gene95387.t1 AT2G36690 35.766 274 151 11 37 296 58 320 4.07e-50 171
MS.gene95387.t1 AT5G08640 34.122 296 179 5 20 306 23 311 7.28e-50 169
MS.gene95387.t1 AT5G08640 34.122 296 179 5 20 306 23 311 7.28e-50 169
MS.gene95387.t1 AT3G21420 33.110 299 185 7 14 300 26 321 2.64e-49 169
MS.gene95387.t1 AT4G22880 35.556 270 161 6 39 297 46 313 4.53e-49 168
MS.gene95387.t1 AT4G22880 35.556 270 161 6 39 297 46 313 4.53e-49 168
MS.gene95387.t1 AT4G22880 35.556 270 161 6 39 297 46 313 4.53e-49 168
MS.gene95387.t1 AT3G19000 32.026 306 188 4 16 301 4 309 6.85e-49 167
MS.gene95387.t1 AT3G13610 32.740 281 165 9 33 300 52 321 6.91e-48 165
MS.gene95387.t1 AT3G60290 33.214 280 174 7 18 289 29 303 1.31e-47 164
MS.gene95387.t1 AT1G17020 34.948 289 176 7 39 318 52 337 3.46e-47 163
MS.gene95387.t1 AT5G59540 33.969 262 157 5 36 288 57 311 5.43e-47 162
MS.gene95387.t1 AT1G06620 35.385 260 154 4 36 288 58 310 7.92e-46 159
MS.gene95387.t1 AT5G05600 36.078 255 150 6 14 258 36 287 8.98e-46 157
MS.gene95387.t1 AT2G44800 32.374 278 175 7 20 289 31 303 1.35e-45 159
MS.gene95387.t1 AT1G78550 34.746 236 146 4 72 301 6 239 1.58e-45 156
MS.gene95387.t1 AT1G15550 31.126 302 189 6 36 327 53 345 4.60e-45 157
MS.gene95387.t1 AT1G05010 34.201 269 162 9 38 299 2 262 5.28e-45 156
MS.gene95387.t1 AT1G60980 34.185 313 182 9 39 330 56 365 5.69e-45 157
MS.gene95387.t1 AT5G63590 33.453 278 165 5 34 300 8 276 9.88e-45 155
MS.gene95387.t1 AT4G25310 31.902 326 207 9 14 331 27 345 1.19e-44 156
MS.gene95387.t1 AT1G03410 35.798 257 151 4 40 288 57 307 1.34e-44 156
MS.gene95387.t1 AT1G04380 34.231 260 154 7 36 288 41 290 1.42e-44 155
MS.gene95387.t1 AT4G25300 30.847 295 194 6 14 301 26 317 1.81e-44 156
MS.gene95387.t1 AT5G43450 35.741 263 145 9 37 288 58 307 2.32e-44 155
MS.gene95387.t1 AT4G21690 33.696 276 160 6 40 300 47 314 2.75e-44 155
MS.gene95387.t1 AT1G03410 35.798 257 151 4 40 288 94 344 3.20e-44 156
MS.gene95387.t1 AT5G63600 33.955 268 161 7 39 300 32 289 4.70e-44 154
MS.gene95387.t1 AT5G59530 33.206 262 160 4 36 288 54 309 5.02e-44 155
MS.gene95387.t1 AT3G19010 31.126 302 161 6 16 301 4 274 5.58e-44 154
MS.gene95387.t1 AT5G43440 31.818 286 174 7 9 288 40 310 6.40e-44 154
MS.gene95387.t1 AT3G19000 31.679 262 159 4 16 257 4 265 2.19e-43 151
MS.gene95387.t1 AT5G07200 32.595 316 186 8 39 330 57 369 2.58e-43 153
MS.gene95387.t1 AT3G19010 33.721 258 154 5 16 257 4 260 4.30e-43 150
MS.gene95387.t1 AT5G63600 33.829 269 161 8 39 300 32 290 7.04e-43 151
MS.gene95387.t1 AT3G55970 34.884 258 152 7 15 258 24 279 7.65e-43 150
MS.gene95387.t1 AT1G17010 31.481 270 175 6 39 301 53 319 1.04e-42 151
MS.gene95387.t1 AT1G03400 35.039 254 144 5 40 286 56 295 1.12e-42 151
MS.gene95387.t1 AT1G77330 33.452 281 161 9 40 306 3 271 1.94e-42 149
MS.gene95387.t1 AT1G80330 32.323 297 178 7 23 305 31 318 2.70e-42 150
MS.gene95387.t1 AT3G12900 35.206 267 155 8 43 300 59 316 3.83e-42 150
MS.gene95387.t1 AT1G49390 30.970 268 176 4 39 299 44 309 5.20e-42 149
MS.gene95387.t1 AT5G20550 30.742 283 175 8 34 300 34 311 5.49e-42 149
MS.gene95387.t1 AT3G61400 36.214 243 140 7 55 288 80 316 1.44e-41 149
MS.gene95387.t1 AT5G63595 31.673 281 164 7 22 297 5 262 1.70e-41 146
MS.gene95387.t1 AT5G20400 29.492 295 189 7 39 320 44 332 4.82e-41 147
MS.gene95387.t1 AT4G25420 32.967 273 169 4 39 299 60 330 1.36e-40 146
MS.gene95387.t1 AT1G80340 32.609 276 164 7 36 300 46 310 3.84e-40 144
MS.gene95387.t1 AT1G62380 30.712 267 175 7 37 299 4 264 6.14e-40 143
MS.gene95387.t1 AT1G04350 32.819 259 153 7 40 288 58 305 8.02e-40 144
MS.gene95387.t1 AT5G59540 34.199 231 136 5 36 257 57 280 1.43e-39 141
MS.gene95387.t1 AT5G07480 27.541 305 196 8 2 294 16 307 1.79e-39 142
MS.gene95387.t1 AT5G54000 31.225 253 164 5 55 300 62 311 5.38e-39 141
MS.gene95387.t1 AT1G06650 33.708 267 143 7 40 288 64 314 6.51e-39 141
MS.gene95387.t1 AT1G12010 29.213 267 179 6 37 299 4 264 9.73e-39 140
MS.gene95387.t1 AT1G06620 35.808 229 133 4 36 257 58 279 1.21e-38 139
MS.gene95387.t1 AT5G51810 32.039 309 185 7 40 329 63 365 6.22e-38 139
MS.gene95387.t1 AT5G43450 36.207 232 124 8 37 257 58 276 1.19e-37 136
MS.gene95387.t1 AT5G43440 31.765 255 153 7 9 257 40 279 1.54e-37 136
MS.gene95387.t1 AT1G04380 34.498 229 133 7 36 257 41 259 5.55e-37 134
MS.gene95387.t1 AT2G30840 32.967 273 166 10 40 301 57 323 6.73e-37 136
MS.gene95387.t1 AT1G49390 31.466 232 150 4 75 299 1 230 1.13e-36 133
MS.gene95387.t1 AT2G30830 31.734 271 167 7 26 288 44 304 1.21e-36 135
MS.gene95387.t1 AT1G06640 33.074 257 158 7 40 288 64 314 1.47e-36 135
MS.gene95387.t1 AT1G03400 31.560 282 144 6 40 286 56 323 1.70e-36 135
MS.gene95387.t1 AT5G12270 30.333 300 184 9 14 300 31 318 1.65e-35 132
MS.gene95387.t1 AT1G06645 33.708 267 153 9 36 288 68 324 3.61e-35 132
MS.gene95387.t1 AT4G21200 29.851 268 167 7 39 297 41 296 8.44e-35 130
MS.gene95387.t1 AT2G19590 31.734 271 162 8 39 299 10 267 9.00e-35 129
MS.gene95387.t1 AT1G44090 32.013 303 190 9 39 327 62 362 1.70e-34 130
MS.gene95387.t1 AT3G61400 36.493 211 120 6 55 257 80 284 1.78e-34 128
MS.gene95387.t1 AT5G54000 30.472 233 153 4 75 300 1 231 3.38e-34 126
MS.gene95387.t1 AT2G30840 32.601 273 161 11 40 301 57 317 6.32e-34 128
MS.gene95387.t1 AT5G43935 29.153 295 172 10 39 322 18 286 7.99e-34 126
MS.gene95387.t1 AT2G25450 30.859 256 164 5 40 288 55 304 5.04e-33 125
MS.gene95387.t1 AT1G06650 34.043 235 122 6 40 257 64 282 9.20e-33 124
MS.gene95387.t1 AT3G50210 32.364 275 162 7 49 302 27 298 2.23e-32 123
MS.gene95387.t1 AT3G50210 32.364 275 162 7 49 302 27 298 2.23e-32 123
MS.gene95387.t1 AT3G50210 32.364 275 162 7 49 302 27 298 2.23e-32 123
MS.gene95387.t1 AT1G78440 28.000 275 175 8 62 318 32 301 2.93e-32 123
MS.gene95387.t1 AT5G63580 33.772 228 131 5 40 257 19 236 1.70e-31 119
MS.gene95387.t1 AT5G63580 33.624 229 132 5 40 258 19 237 2.46e-31 118
MS.gene95387.t1 AT1G30040 27.961 304 191 10 10 300 4 292 5.33e-31 120
MS.gene95387.t1 AT1G06640 34.071 226 134 7 40 257 64 282 6.18e-31 118
MS.gene95387.t1 AT1G06640 33.333 225 137 6 40 257 64 282 8.72e-31 119
MS.gene95387.t1 AT2G30840 33.186 226 137 7 40 257 57 276 1.26e-30 118
MS.gene95387.t1 AT1G47990 29.808 312 186 9 37 329 12 309 4.21e-30 117
MS.gene95387.t1 AT3G49630 29.478 268 171 6 57 308 34 299 4.21e-29 114
MS.gene95387.t1 AT3G49630 29.478 268 171 6 57 308 30 295 4.35e-29 114
MS.gene95387.t1 AT4G25420 30.303 231 147 4 39 257 60 288 5.52e-29 113
MS.gene95387.t1 AT4G25310 29.321 324 190 10 14 331 27 317 7.85e-29 113
MS.gene95387.t1 AT2G19590 31.513 238 142 7 72 299 26 252 7.94e-27 107
MS.gene95387.t1 AT2G34555 29.391 279 161 10 40 300 27 287 2.04e-26 107
MS.gene95387.t1 AT5G07480 31.818 176 113 4 124 294 25 198 6.44e-26 103
MS.gene95387.t1 AT5G51810 31.304 230 140 6 40 257 63 286 1.36e-25 104
MS.gene95387.t1 AT4G23340 32.099 243 133 9 65 288 30 259 3.78e-25 103
MS.gene95387.t1 AT1G02400 28.889 270 168 9 48 300 27 289 4.21e-25 103
MS.gene95387.t1 AT3G49620 28.137 263 170 7 57 302 59 319 1.57e-24 102
MS.gene95387.t1 AT1G50960 26.619 278 192 6 34 303 34 307 7.18e-24 100
MS.gene95387.t1 AT4G25300 35.211 142 88 3 150 289 72 211 1.07e-23 98.6
MS.gene95387.t1 AT3G46490 26.263 297 182 6 40 306 12 301 1.94e-23 99.0
MS.gene95387.t1 AT3G46500 26.667 285 191 7 40 307 12 295 2.49e-22 95.9
MS.gene95387.t1 AT1G14130 27.925 265 175 8 40 299 9 262 8.53e-22 94.4
MS.gene95387.t1 AT1G30040 27.203 261 162 10 10 257 4 249 1.35e-21 92.8
MS.gene95387.t1 AT3G46490 26.335 281 170 6 40 290 12 285 2.56e-21 92.8
MS.gene95387.t1 AT1G35190 25.524 286 171 7 42 306 9 273 8.93e-21 91.3
MS.gene95387.t1 AT1G35190 26.117 291 186 8 42 306 9 296 1.01e-19 88.6
MS.gene95387.t1 AT3G50210 34.132 167 105 2 141 302 50 216 1.09e-19 87.0
MS.gene95387.t1 AT5G58660 24.913 289 175 9 40 297 34 311 1.52e-19 88.6
MS.gene95387.t1 AT3G46500 26.022 269 181 7 40 291 12 279 2.65e-19 87.0
MS.gene95387.t1 AT1G14120 26.336 262 179 6 37 294 5 256 6.52e-19 86.3
MS.gene95387.t1 AT1G14120 26.336 262 179 6 37 294 5 256 6.52e-19 86.3
MS.gene95387.t1 AT1G14120 26.336 262 179 6 37 294 5 256 6.52e-19 86.3
MS.gene95387.t1 AT3G49630 33.136 169 110 3 141 308 60 226 1.11e-18 84.7
MS.gene95387.t1 AT1G52820 28.926 242 161 6 62 297 36 272 1.26e-18 85.5
MS.gene95387.t1 AT5G51310 27.049 244 159 6 62 288 22 263 2.08e-18 85.1
MS.gene95387.t1 AT3G47190 26.102 295 180 10 39 309 31 311 1.55e-17 82.4
MS.gene95387.t1 AT1G02400 26.471 238 154 7 55 277 34 265 8.84e-17 79.3
MS.gene95387.t1 AT4G23340 42.268 97 52 2 195 288 46 141 3.96e-16 76.3
MS.gene95387.t1 AT4G03070 24.382 283 172 9 39 297 13 277 6.46e-16 77.8
MS.gene95387.t1 AT4G16765 30.769 143 90 5 135 268 42 184 2.42e-13 68.2
MS.gene95387.t1 AT1G28030 27.419 248 163 8 61 297 36 277 2.68e-13 70.1
MS.gene95387.t1 AT4G16770 26.180 233 149 6 39 253 21 248 1.33e-12 67.4
MS.gene95387.t1 AT3G46500 27.647 170 116 4 144 307 53 221 1.93e-12 66.6
MS.gene95387.t1 AT3G46500 27.647 170 116 4 144 307 53 221 1.93e-12 66.6
MS.gene95387.t1 AT2G06960 34.848 132 64 5 192 318 26 140 1.81e-11 62.0
MS.gene95387.t1 AT4G16765 39.175 97 55 2 208 301 75 170 1.93e-11 62.8
MS.gene95387.t1 AT1G52800 22.305 269 196 8 39 299 9 272 2.69e-11 63.9
MS.gene95387.t1 AT1G80320 23.077 260 188 7 40 290 9 265 5.80e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAATCTCTTTCACTAAT+TGG 0.140674 3.3:+47821178 None:intergenic
TTCCATCCTTCTGGCTTATC+TGG 0.171380 3.3:+47821148 None:intergenic
CAGGATCAGTGTGTCGTTTC+AGG 0.214812 3.3:+47820948 None:intergenic
AGGTCAGGTTGAGGGCATTT+TGG 0.233663 3.3:+47820980 None:intergenic
TTGCATCTGTTGCTGGATAT+TGG 0.281140 3.3:+47819199 None:intergenic
GTTACCTCTTTCCATCCTTC+TGG 0.281740 3.3:+47821139 None:intergenic
AACTGATTGTAAGCACCTTT+TGG 0.286081 3.3:+47823164 None:intergenic
TGACATGTCTGGTGGTAAAA+AGG 0.287392 3.3:-47822931 MS.gene95387:CDS
TTGCAAAAGCTTGCGAGAAC+TGG 0.289000 3.3:-47823061 MS.gene95387:CDS
GACAAAAGCATGTGTTGATA+TGG 0.321789 3.3:-47821029 MS.gene95387:CDS
AATAATCTCTTTCACTAATT+GGG 0.336585 3.3:+47821179 None:intergenic
GCCACCAACGTCGTCGATTC+CGG 0.358520 3.3:+47823109 None:intergenic
TACACAATTGCATCTGTTGC+TGG 0.396791 3.3:+47819192 None:intergenic
CTGAAACGACACACTGATCC+TGG 0.418531 3.3:-47820947 MS.gene95387:CDS
TCTCCCTCTCTGACCTTCAA+AGG 0.423280 3.3:+47819168 None:intergenic
ATTCCGGCGAGAGAAATAAT+TGG 0.427584 3.3:+47823125 None:intergenic
CACTCGAGTCTAGTTTCATC+AGG 0.427976 3.3:-47823202 MS.gene95387:CDS
TGCAATTGTGTACCCTTTGA+AGG 0.428183 3.3:-47819181 MS.gene95387:CDS
AGGGAGAAGAGATGAATGAT+TGG 0.431582 3.3:-47821228 MS.gene95387:CDS
GTTGTTGATATTGGAGATCA+TGG 0.434431 3.3:-47820824 MS.gene95387:CDS
CCTCATCTCTAGTAACTTGA+AGG 0.438822 3.3:+47820888 None:intergenic
TGCCATCAGAAGAGAAGCTT+CGG 0.444347 3.3:-47822956 MS.gene95387:CDS
GAGGTGTTATCTGAGGCTAT+GGG 0.447873 3.3:-47821070 MS.gene95387:CDS
AAGCTTCGGTTTGACATGTC+TGG 0.449959 3.3:-47822942 MS.gene95387:CDS
TGAGGTGTTATCTGAGGCTA+TGG 0.451886 3.3:-47821071 MS.gene95387:CDS
ATCTTCCAAGTTGTTGATCA+TGG 0.452418 3.3:-47823035 MS.gene95387:CDS
TGCAAAAGCTTGCGAGAACT+GGG 0.464107 3.3:-47823060 MS.gene95387:CDS
GGAATGTTGCTACGGATAAA+CGG 0.470067 3.3:+47819220 None:intergenic
CCTCAACCTGACCTTACTCT+TGG 0.478704 3.3:-47820971 MS.gene95387:CDS
ACAACAAAAGCACCTTCAAC+TGG 0.481290 3.3:+47820842 None:intergenic
CTCCCTCTCTGACCTTCAAA+GGG 0.483986 3.3:+47819169 None:intergenic
CAAGAGTAAGGTCAGGTTGA+GGG 0.498972 3.3:+47820972 None:intergenic
CCACGCCATGATCAACAACT+TGG 0.500880 3.3:+47823030 None:intergenic
GACGAAAGCACTCGTCCAAA+AGG 0.503109 3.3:-47823179 MS.gene95387:CDS
TTTAACATGCAAGTTGTTTG+AGG 0.504827 3.3:-47821089 MS.gene95387:CDS
TTAGTGAAAGAGATTATTCA+AGG 0.506390 3.3:-47821174 MS.gene95387:CDS
GGGAGAGAAATATGTGATGG+AGG 0.506607 3.3:-47819151 MS.gene95387:CDS
GTCGTTTCAGGCCAAGAGTA+AGG 0.513030 3.3:+47820960 None:intergenic
GGTTCAAAAGAGCTGATCAC+AGG 0.523724 3.3:-47819266 MS.gene95387:CDS
ATCACTGTTCCACCAGTTGA+AGG 0.533931 3.3:-47820854 MS.gene95387:CDS
AACACCAGAGTGATTGTGCC+AGG 0.538136 3.3:+47820929 None:intergenic
ATTCCAATTATTTCTCTCGC+CGG 0.539730 3.3:-47823128 MS.gene95387:CDS
AGAGGGAGAGAAATATGTGA+TGG 0.544187 3.3:-47819154 MS.gene95387:CDS
GCCGGAATCGACGACGTTGG+TGG 0.544216 3.3:-47823110 MS.gene95387:CDS
TTCAGGCCAAGAGTAAGGTC+AGG 0.545172 3.3:+47820965 None:intergenic
AACCGAAGCTTCTCTTCTGA+TGG 0.548453 3.3:+47822954 None:intergenic
CCAAGAGTAAGGTCAGGTTG+AGG 0.550579 3.3:+47820971 None:intergenic
TGCATGCAGTATTTAAGTAA+TGG 0.564893 3.3:-47819291 MS.gene95387:intron
TAAGCCAGAAGGATGGAAAG+AGG 0.574399 3.3:-47821143 MS.gene95387:CDS
GGTCGCAAATCTCTTCTCTA+CGG 0.575121 3.3:+47823087 None:intergenic
CTTCAAGTTACTAGAGATGA+GGG 0.575286 3.3:-47820887 MS.gene95387:CDS
TGATATGGTTCAAAAGATTG+TGG 0.575423 3.3:-47821014 MS.gene95387:CDS
TGCAGTATTTAAGTAATGGA+CGG 0.578042 3.3:-47819287 MS.gene95387:intron
GTTGTTTGAGGTGTTATCTG+AGG 0.584471 3.3:-47821077 MS.gene95387:CDS
TGATCCTGGCACAATCACTC+TGG 0.585677 3.3:-47820933 MS.gene95387:CDS
CCAAGTTGTTGATCATGGCG+TGG 0.589940 3.3:-47823030 MS.gene95387:CDS
CCTTCAAGTTACTAGAGATG+AGG 0.598782 3.3:-47820888 MS.gene95387:CDS
AGGTGTTATCTGAGGCTATG+GGG 0.601581 3.3:-47821069 MS.gene95387:CDS
GGCCAGATAAGCCAGAAGGA+TGG 0.602319 3.3:-47821150 MS.gene95387:CDS
AAGAGCTGATCACAGGGCAG+TGG 0.603019 3.3:-47819259 MS.gene95387:CDS
TCTGGTGTTTCAAGAACAAG+TGG 0.603815 3.3:-47820915 MS.gene95387:CDS
TACCCTTTGAAGGTCAGAGA+GGG 0.609840 3.3:-47819171 MS.gene95387:CDS
TGGATATTGGAATGTTGCTA+CGG 0.610921 3.3:+47819212 None:intergenic
CTAGAGATGAGGGTGAGACG+TGG 0.616545 3.3:-47820877 MS.gene95387:CDS
ACAAAAGCACCTTCAACTGG+TGG 0.617322 3.3:+47820845 None:intergenic
GTTCAAAAGAGCTGATCACA+GGG 0.630306 3.3:-47819265 MS.gene95387:CDS
CTTCGGTTTGACATGTCTGG+TGG 0.633367 3.3:-47822939 MS.gene95387:CDS
TGTATATTTCAGCAAAAGTG+AGG 0.638977 3.3:+47819124 None:intergenic
AGGTGGCCAGATAAGCCAGA+AGG 0.663810 3.3:-47821154 MS.gene95387:CDS
CTCGCCGGAATCGACGACGT+TGG 0.668038 3.3:-47823113 MS.gene95387:CDS
ACTCGAGTCTAGTTTCATCA+GGG 0.678203 3.3:-47823201 MS.gene95387:CDS
GTGTTTCAAGAACAAGTGGG+TGG 0.685189 3.3:-47820911 MS.gene95387:CDS
GTGAAAGAGATTATTCAAGG+TGG 0.692405 3.3:-47821171 MS.gene95387:CDS
GCAAAAGCTTGCGAGAACTG+GGG 0.707380 3.3:-47823059 MS.gene95387:CDS
GTACCCTTTGAAGGTCAGAG+AGG 0.744630 3.3:-47819172 MS.gene95387:CDS
CTGGTGTTTCAAGAACAAGT+GGG 0.745352 3.3:-47820914 MS.gene95387:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAACAAAAAAATAAAAT+TGG - chr3.3:47822019-47822038 MS.gene95387:intron 10.0%
!! AATAATAAACATTGAATTAT+AGG - chr3.3:47820887-47820906 MS.gene95387:CDS 10.0%
!! ATAATAAACATTGAATTATA+GGG - chr3.3:47820888-47820907 MS.gene95387:CDS 10.0%
!! ATAATTCAATGTTTATTATT+TGG + chr3.3:47820887-47820906 None:intergenic 10.0%
!! TAATTCAATGTTTATTATTT+GGG + chr3.3:47820886-47820905 None:intergenic 10.0%
!!! ATTCTAAAATTTTCTTTTAT+TGG + chr3.3:47820970-47820989 None:intergenic 10.0%
!!! TTTTTATAATAACTTAAATG+TGG - chr3.3:47822177-47822196 MS.gene95387:intron 10.0%
!! AAACAAAAAAATAAAATTGG+TGG - chr3.3:47822022-47822041 MS.gene95387:intron 15.0%
!! AAATAACATATGCAAATATA+AGG - chr3.3:47820544-47820563 MS.gene95387:intron 15.0%
!! ACAATAATAATAATAGTTCA+AGG + chr3.3:47821922-47821941 None:intergenic 15.0%
!! ATATTATTAATTGATTGATG+TGG - chr3.3:47819854-47819873 MS.gene95387:intron 15.0%
!! ATTAAGTGTTCATATAAAAT+TGG - chr3.3:47822561-47822580 MS.gene95387:intron 15.0%
!! CATTCAAAAATATTTACATA+TGG - chr3.3:47820937-47820956 MS.gene95387:CDS 15.0%
!! CCTATAAAATTATATCTATT+TGG - chr3.3:47822755-47822774 MS.gene95387:intron 15.0%
!! TAGTAAAATGAACTTATTAA+AGG - chr3.3:47822066-47822085 MS.gene95387:intron 15.0%
!! TTAAGTGTTCATATAAAATT+GGG - chr3.3:47822562-47822581 MS.gene95387:intron 15.0%
!! TTGTCAAAAAATAATAATTC+AGG + chr3.3:47822327-47822346 None:intergenic 15.0%
!!! AAATTTTCTTTTATTGGTAA+AGG + chr3.3:47820964-47820983 None:intergenic 15.0%
!!! ATTATTATTTTTGAATTGGT+TGG - chr3.3:47820323-47820342 MS.gene95387:intron 15.0%
!!! CATATGTAAATATTTTTGAA+TGG + chr3.3:47820939-47820958 None:intergenic 15.0%
!!! CCAAATAGATATAATTTTAT+AGG + chr3.3:47822758-47822777 None:intergenic 15.0%
!!! GTTTTTAAAGTCTAATAATT+CGG + chr3.3:47822361-47822380 None:intergenic 15.0%
!!! TTATTTTTTGACAAAAATGT+AGG - chr3.3:47822333-47822352 MS.gene95387:intron 15.0%
!!! TTTTTAAAGTCTAATAATTC+AGG + chr3.3:47822360-47822379 None:intergenic 15.0%
!!! TTTTTAAAGTCTAATAATTC+GGG + chr3.3:47822360-47822379 None:intergenic 15.0%
!!! TTTTTTTTTTACCAACTATA+TGG - chr3.3:47821691-47821710 MS.gene95387:intron 15.0%
!! AAAATGAAAAAAAATCAGCT+TGG - chr3.3:47820788-47820807 MS.gene95387:intron 20.0%
!! AAATGAAAAAAAATCAGCTT+GGG - chr3.3:47820789-47820808 MS.gene95387:intron 20.0%
!! AATAATCTCTTTCACTAATT+GGG + chr3.3:47821158-47821177 None:intergenic 20.0%
!! ACTATGAGTATCAAATATTT+AGG + chr3.3:47820600-47820619 None:intergenic 20.0%
!! CAAAAAAAGAAAATTTGCAT+TGG - chr3.3:47822625-47822644 MS.gene95387:intron 20.0%
!! CATTTAAATTGTATTTCTTC+TGG - chr3.3:47821986-47822005 MS.gene95387:intron 20.0%
!! CTATGAGTATCAAATATTTA+GGG + chr3.3:47820599-47820618 None:intergenic 20.0%
!! CTCAAACTACTTATATATAT+TGG - chr3.3:47821070-47821089 MS.gene95387:CDS 20.0%
!! CTTGATTAATATTGTGTATT+TGG - chr3.3:47819930-47819949 MS.gene95387:intron 20.0%
!! TAAGTTAGTTGAAAACATAA+TGG - chr3.3:47820236-47820255 MS.gene95387:intron 20.0%
!! TATTATTGTACTTATGATGT+AGG - chr3.3:47821933-47821952 MS.gene95387:intron 20.0%
!! TGTCATTGAATAAATACAAT+AGG - chr3.3:47822275-47822294 MS.gene95387:intron 20.0%
!!! AACTGATTCATCTTTAAAAT+TGG + chr3.3:47820264-47820283 None:intergenic 20.0%
!!! ATACCAATTAGTTTTTATGT+GGG - chr3.3:47819567-47819586 MS.gene95387:intron 20.0%
!!! ATGACAAGTTTTTTGTTTTT+TGG + chr3.3:47822401-47822420 None:intergenic 20.0%
!!! ATTTTAAAGATGAATCAGTT+AGG - chr3.3:47820264-47820283 MS.gene95387:intron 20.0%
!!! CAAGTTTGTTTTTTGTTTTT+TGG + chr3.3:47822508-47822527 None:intergenic 20.0%
!!! CAATGCAAATTTTCTTTTTT+TGG + chr3.3:47822627-47822646 None:intergenic 20.0%
!!! CACAAAATAAGTTCTAATTA+TGG - chr3.3:47820000-47820019 MS.gene95387:intron 20.0%
!!! TCAATATTTTAAGAAGTGTT+GGG - chr3.3:47822833-47822852 MS.gene95387:intron 20.0%
!!! TTATTCAATGACAAGTTTTT+TGG + chr3.3:47822268-47822287 None:intergenic 20.0%
!!! TTTTAAAGTCTAAAAGATTC+AGG + chr3.3:47821960-47821979 None:intergenic 20.0%
! AAAGAAAAGTGAGTTTAATG+AGG + chr3.3:47822110-47822129 None:intergenic 25.0%
! AAATAAATACATACCAACAG+GGG + chr3.3:47820855-47820874 None:intergenic 25.0%
! AAATTGATAAATACACCTCA+AGG + chr3.3:47819766-47819785 None:intergenic 25.0%
! AACAAGTGATAACTACAAAT+TGG + chr3.3:47819616-47819635 None:intergenic 25.0%
! AAGAAAAGTGAGTTTAATGA+GGG + chr3.3:47822109-47822128 None:intergenic 25.0%
! CAAGATTTGCCAAAATAAAT+TGG + chr3.3:47822797-47822816 None:intergenic 25.0%
! GAAATAAATACATACCAACA+GGG + chr3.3:47820856-47820875 None:intergenic 25.0%
! GAATAATCTCTTTCACTAAT+TGG + chr3.3:47821159-47821178 None:intergenic 25.0%
! TACTAACGCAAAAAAAAAAG+CGG - chr3.3:47822917-47822936 MS.gene95387:CDS 25.0%
! TCAGTTCATTGTTTCATATA+TGG - chr3.3:47820758-47820777 MS.gene95387:intron 25.0%
! TTAGTGAAAGAGATTATTCA+AGG - chr3.3:47821160-47821179 MS.gene95387:CDS 25.0%
! TTGAATAAATACAATAGGCA+TGG - chr3.3:47822280-47822299 MS.gene95387:intron 25.0%
!! AAAATACTCGTTCTAAACAT+GGG - chr3.3:47819636-47819655 MS.gene95387:intron 25.0%
!! AAAGAACTCTTTAGAAAAAC+TGG + chr3.3:47819354-47819373 None:intergenic 25.0%
!! AATAAGTTCTAATTATGGAC+AGG - chr3.3:47820005-47820024 MS.gene95387:intron 25.0%
!! ACACCTTCTAAAAATTAAGT+GGG + chr3.3:47819727-47819746 None:intergenic 25.0%
!! GCAATTTAAAACCATATAGT+TGG + chr3.3:47821705-47821724 None:intergenic 25.0%
!! GGTTTATTAGGGTAAATTTT+GGG - chr3.3:47820483-47820502 MS.gene95387:intron 25.0%
!! TAAAATACTCGTTCTAAACA+TGG - chr3.3:47819635-47819654 MS.gene95387:intron 25.0%
!! TACACCTTCTAAAAATTAAG+TGG + chr3.3:47819728-47819747 None:intergenic 25.0%
!!! ATGGTTTTAAATTGCAATTG+AGG - chr3.3:47821710-47821729 MS.gene95387:intron 25.0%
!!! CATACCAATTAGTTTTTATG+TGG - chr3.3:47819566-47819585 MS.gene95387:intron 25.0%
!!! CTCAATATTTTAAGAAGTGT+TGG - chr3.3:47822832-47822851 MS.gene95387:intron 25.0%
!!! TGTGTATTTGGTTCAATTTT+CGG - chr3.3:47819942-47819961 MS.gene95387:intron 25.0%
AAAGATGAATCAGTTAGGTT+CGG - chr3.3:47820269-47820288 MS.gene95387:intron 30.0%
AACTTGCATTGGGTTTATTA+GGG - chr3.3:47820472-47820491 MS.gene95387:intron 30.0%
ACTCCCACATAAAAACTAAT+TGG + chr3.3:47819573-47819592 None:intergenic 30.0%
GAAATCATATGTAGAAACCA+TGG + chr3.3:47820679-47820698 None:intergenic 30.0%
GAGTTTAATGAGGGTAAATT+TGG + chr3.3:47822100-47822119 None:intergenic 30.0%
GGAAATAAATACATACCAAC+AGG + chr3.3:47820857-47820876 None:intergenic 30.0%
TGATATGGTTCAAAAGATTG+TGG - chr3.3:47821320-47821339 MS.gene95387:intron 30.0%
TGCATGCAGTATTTAAGTAA+TGG - chr3.3:47823043-47823062 MS.gene95387:CDS 30.0%
TGGTTTATGATAGAACACTA+TGG - chr3.3:47821583-47821602 MS.gene95387:intron 30.0%
TGTATATTTCAGCAAAAGTG+AGG + chr3.3:47823213-47823232 None:intergenic 30.0%
TTATAGCAACATATACCTTG+AGG - chr3.3:47819748-47819767 MS.gene95387:intron 30.0%
TTTAACATGCAAGTTGTTTG+AGG - chr3.3:47821245-47821264 MS.gene95387:intron 30.0%
TTTCTGCTTCTTTCTTCTTA+CGG - chr3.3:47820651-47820670 MS.gene95387:intron 30.0%
! AAGCCTTATCCCATTAAATA+GGG + chr3.3:47821632-47821651 None:intergenic 30.0%
! ACGTAGTATTGAAGAAAAGA+CGG + chr3.3:47822963-47822982 None:intergenic 30.0%
! ATTGCGAATTTTACCGTATT+AGG + chr3.3:47821758-47821777 None:intergenic 30.0%
! GATTTCTTCTTCTTTTCTAC+TGG - chr3.3:47820693-47820712 MS.gene95387:intron 30.0%
! GGGTTTATTAGGGTAAATTT+TGG - chr3.3:47820482-47820501 MS.gene95387:intron 30.0%
! GTAGACTTTTCTCTTCAAAT+GGG - chr3.3:47820067-47820086 MS.gene95387:intron 30.0%
! GTATTTTGCGAGTTACATTT+TGG - chr3.3:47819506-47819525 MS.gene95387:intron 30.0%
! TAACTTGCATTGGGTTTATT+AGG - chr3.3:47820471-47820490 MS.gene95387:intron 30.0%
! TCACATGGTCCAATTTATTT+TGG - chr3.3:47822785-47822804 MS.gene95387:intron 30.0%
! TGCAGTATTTAAGTAATGGA+CGG - chr3.3:47823047-47823066 MS.gene95387:CDS 30.0%
! TGTTTATTATTTGGGATAGC+TGG + chr3.3:47820878-47820897 None:intergenic 30.0%
! TTGCGAATTTTACCGTATTA+GGG + chr3.3:47821757-47821776 None:intergenic 30.0%
! TTGTTTCTTACATTTGAGAC+CGG - chr3.3:47822234-47822253 MS.gene95387:intron 30.0%
! TTTCAATTTTACCCTTGTCT+TGG + chr3.3:47822148-47822167 None:intergenic 30.0%
!! ACACCCACTTAATTTTTAGA+AGG - chr3.3:47819721-47819740 MS.gene95387:intron 30.0%
!! ACATATTATTAATTTGCGCG+TGG - chr3.3:47823020-47823039 MS.gene95387:CDS 30.0%
!! AGAAAAGAAAAGTATTGCAG+CGG + chr3.3:47820636-47820655 None:intergenic 30.0%
!! AGTGACAATTAACTTGCATT+GGG - chr3.3:47820462-47820481 MS.gene95387:intron 30.0%
!! TCACTTTTGCTGAAATATAC+AGG - chr3.3:47823212-47823231 MS.gene95387:CDS 30.0%
!! TTATGTGCGTTTGTTGTTAT+GGG + chr3.3:47820576-47820595 None:intergenic 30.0%
AAGATGAATCAGTTAGGTTC+GGG - chr3.3:47820270-47820289 MS.gene95387:intron 35.0%
AATTACCTTGAGCAAAAGTG+AGG - chr3.3:47823247-47823266 MS.gene95387:CDS 35.0%
ACACTTTCTCTTCAAATGAG+AGG - chr3.3:47820125-47820144 MS.gene95387:intron 35.0%
AGAGGACTAGATTTCTCAAA+TGG - chr3.3:47820143-47820162 MS.gene95387:intron 35.0%
AGGGTGCATATAATATGAAC+CGG - chr3.3:47820907-47820926 MS.gene95387:CDS 35.0%
AGTTAAGGTGAACCCTAATA+CGG - chr3.3:47821742-47821761 MS.gene95387:intron 35.0%
ATCTTCCAAGTTGTTGATCA+TGG - chr3.3:47819299-47819318 MS.gene95387:intron 35.0%
ATGCACACATAGTAAGAAAG+TGG + chr3.3:47822208-47822227 None:intergenic 35.0%
ATGCAGTTAGAGTGCAAATA+TGG - chr3.3:47821563-47821582 MS.gene95387:intron 35.0%
ATTACCTTGAGCAAAAGTGA+GGG - chr3.3:47823248-47823267 MS.gene95387:CDS 35.0%
ATTACTTAACATGTGCCCTA+AGG + chr3.3:47822604-47822623 None:intergenic 35.0%
CTATTTAATGGGATAAGGCT+TGG - chr3.3:47821631-47821650 MS.gene95387:intron 35.0%
CTATTTGGTCATACTTCACA+TGG - chr3.3:47822770-47822789 MS.gene95387:intron 35.0%
CTTATCCCATTAAATAGGGT+CGG + chr3.3:47821628-47821647 None:intergenic 35.0%
GAGGACTAGATTTCTCAAAT+GGG - chr3.3:47820144-47820163 MS.gene95387:intron 35.0%
GTATTCTAGCAAATGTCTGT+AGG - chr3.3:47819686-47819705 MS.gene95387:intron 35.0%
GTGAAAGAGATTATTCAAGG+TGG - chr3.3:47821163-47821182 MS.gene95387:CDS 35.0%
GTTGTTGATATTGGAGATCA+TGG - chr3.3:47821510-47821529 MS.gene95387:intron 35.0%
TAATTGTCACTCGCTACAAA+CGG + chr3.3:47820453-47820472 None:intergenic 35.0%
TACGGTAAAATTCGCAATGT+CGG - chr3.3:47821760-47821779 MS.gene95387:intron 35.0%
TAGCTCGTGAATTATGATGT+AGG - chr3.3:47822440-47822459 MS.gene95387:intron 35.0%
TCTTTACTACTCCAAGACAA+GGG - chr3.3:47822134-47822153 MS.gene95387:intron 35.0%
TGGATATTGGAATGTTGCTA+CGG + chr3.3:47823125-47823144 None:intergenic 35.0%
TTACTTAACATGTGCCCTAA+GGG + chr3.3:47822603-47822622 None:intergenic 35.0%
TTGAGGTCATAGTGTAGTTA+AGG - chr3.3:47821727-47821746 MS.gene95387:intron 35.0%
! AACTGATTGTAAGCACCTTT+TGG + chr3.3:47819173-47819192 None:intergenic 35.0%
! ATATAATCGAGAGTTTTCGC+TGG + chr3.3:47819098-47819117 None:intergenic 35.0%
! ATATTGGACCTCCTTTTTAC+AGG - chr3.3:47821086-47821105 MS.gene95387:CDS 35.0%
! ATTCCAATTATTTCTCTCGC+CGG - chr3.3:47819206-47819225 MS.gene95387:CDS 35.0%
! CAAGCCTTATCCCATTAAAT+AGG + chr3.3:47821633-47821652 None:intergenic 35.0%
! CGTAGACTTTTCTCTTCAAA+TGG - chr3.3:47820066-47820085 MS.gene95387:intron 35.0%
! CTCACACACTTGCATTTTTA+GGG - chr3.3:47819482-47819501 MS.gene95387:intron 35.0%
! CTCATTTGAAGAGAAAGTGT+TGG + chr3.3:47820125-47820144 None:intergenic 35.0%
! CTTCAAGTTACTAGAGATGA+GGG - chr3.3:47821447-47821466 MS.gene95387:intron 35.0%
! CTTTTGCTGAAATATACAGG+AGG - chr3.3:47823215-47823234 MS.gene95387:CDS 35.0%
! GACAAAAGCATGTGTTGATA+TGG - chr3.3:47821305-47821324 MS.gene95387:intron 35.0%
! TATTGGACCTCCTTTTTACA+GGG - chr3.3:47821087-47821106 MS.gene95387:CDS 35.0%
! TCTCACACACTTGCATTTTT+AGG - chr3.3:47819481-47819500 MS.gene95387:intron 35.0%
! TGAGGGTAAATTTGGAATTG+TGG + chr3.3:47822092-47822111 None:intergenic 35.0%
! TTTGAATTGGTTGGTATGCA+GGG - chr3.3:47820332-47820351 MS.gene95387:intron 35.0%
!! AAATGTTAACTTGTGCCCTA+AGG + chr3.3:47822734-47822753 None:intergenic 35.0%
!! AATGTTAACTTGTGCCCTAA+GGG + chr3.3:47822733-47822752 None:intergenic 35.0%
!! GAGTGACAATTAACTTGCAT+TGG - chr3.3:47820461-47820480 MS.gene95387:intron 35.0%
!! GTTATGTGCGTTTGTTGTTA+TGG + chr3.3:47820577-47820596 None:intergenic 35.0%
!! TATTTTTGAATGGCTCGTAC+CGG + chr3.3:47820929-47820948 None:intergenic 35.0%
!! TTTGAAGAGAAAGTGTTGGT+TGG + chr3.3:47820121-47820140 None:intergenic 35.0%
!! TTTTGAATTGGTTGGTATGC+AGG - chr3.3:47820331-47820350 MS.gene95387:intron 35.0%
!!! ACTCACTAGTTTTTATGTGC+GGG + chr3.3:47819812-47819831 None:intergenic 35.0%
!!! CACTCACTAGTTTTTATGTG+CGG + chr3.3:47819813-47819832 None:intergenic 35.0%
!!! GGTGCTTTTGTTGTTGATAT+TGG - chr3.3:47821501-47821520 MS.gene95387:intron 35.0%
AACGGCAATTAACTCACGTT+CGG + chr3.3:47820435-47820454 None:intergenic 40.0%
AATGGGTCCCTACTTTGTTA+TGG - chr3.3:47820161-47820180 MS.gene95387:intron 40.0%
ACGGTAAAATTCGCAATGTC+GGG - chr3.3:47821761-47821780 MS.gene95387:intron 40.0%
AGAGGGAGAGAAATATGTGA+TGG - chr3.3:47823180-47823199 MS.gene95387:CDS 40.0%
AGATGAATCAGTTAGGTTCG+GGG - chr3.3:47820271-47820290 MS.gene95387:intron 40.0%
AGGGAGAAGAGATGAATGAT+TGG - chr3.3:47821106-47821125 MS.gene95387:CDS 40.0%
AGGTTCCACCATAACAAAGT+AGG + chr3.3:47820172-47820191 None:intergenic 40.0%
ATGTAGCCGACCCTATTTAA+TGG - chr3.3:47821619-47821638 MS.gene95387:intron 40.0%
ATTCCGGCGAGAGAAATAAT+TGG + chr3.3:47819212-47819231 None:intergenic 40.0%
CATCTCTTCTCCCTGTAAAA+AGG + chr3.3:47821100-47821119 None:intergenic 40.0%
CCTCATCTCTAGTAACTTGA+AGG + chr3.3:47821449-47821468 None:intergenic 40.0%
CGACCCTATTTAATGGGATA+AGG - chr3.3:47821626-47821645 MS.gene95387:intron 40.0%
CTGGTGTTTCAAGAACAAGT+GGG - chr3.3:47821420-47821439 MS.gene95387:intron 40.0%
GAAAAAAAATCAGCTTGGGC+TGG - chr3.3:47820793-47820812 MS.gene95387:intron 40.0%
GACATGTCTGGTGGTAAAAA+GGG - chr3.3:47819404-47819423 MS.gene95387:intron 40.0%
GGAATGTTGCTACGGATAAA+CGG + chr3.3:47823117-47823136 None:intergenic 40.0%
GGTTCCACCATAACAAAGTA+GGG + chr3.3:47820171-47820190 None:intergenic 40.0%
GTCTTTACTACTCCAAGACA+AGG - chr3.3:47822133-47822152 MS.gene95387:intron 40.0%
TAAATACATACCAACAGGGG+CGG + chr3.3:47820852-47820871 None:intergenic 40.0%
TACACAATTGCATCTGTTGC+TGG + chr3.3:47823145-47823164 None:intergenic 40.0%
TCTGGTGTTTCAAGAACAAG+TGG - chr3.3:47821419-47821438 MS.gene95387:intron 40.0%
TCTTTCTTCTTACGGTTCCA+TGG - chr3.3:47820659-47820678 MS.gene95387:intron 40.0%
TGACATGTCTGGTGGTAAAA+AGG - chr3.3:47819403-47819422 MS.gene95387:intron 40.0%
TGCAATTGTGTACCCTTTGA+AGG - chr3.3:47823153-47823172 MS.gene95387:CDS 40.0%
TGGTTCGTGAACTATGATGT+AGG - chr3.3:47822300-47822319 MS.gene95387:intron 40.0%
TGTAGCCGACCCTATTTAAT+GGG - chr3.3:47821620-47821639 MS.gene95387:intron 40.0%
TTCCTTAACATGTGCCCTTA+GGG - chr3.3:47822716-47822735 MS.gene95387:intron 40.0%
TTGCATCTGTTGCTGGATAT+TGG + chr3.3:47823138-47823157 None:intergenic 40.0%
! ACTCGAGTCTAGTTTCATCA+GGG - chr3.3:47819133-47819152 MS.gene95387:CDS 40.0%
! ATACTCGTTCTAAACATGGG+CGG - chr3.3:47819639-47819658 MS.gene95387:intron 40.0%
! CCTTCAAGTTACTAGAGATG+AGG - chr3.3:47821446-47821465 MS.gene95387:intron 40.0%
! CTTTGTTATGGTGGAACCTT+TGG - chr3.3:47820173-47820192 MS.gene95387:intron 40.0%
! GTTGTTTGAGGTGTTATCTG+AGG - chr3.3:47821257-47821276 MS.gene95387:intron 40.0%
! TGACACACCGACATTGATTA+GGG + chr3.3:47820032-47820051 None:intergenic 40.0%
! TTCTTACATTTGAGACCGGA+GGG - chr3.3:47822238-47822257 MS.gene95387:intron 40.0%
! TTGAATTGGTTGGTATGCAG+GGG - chr3.3:47820333-47820352 MS.gene95387:intron 40.0%
! TTTCTTACATTTGAGACCGG+AGG - chr3.3:47822237-47822256 MS.gene95387:intron 40.0%
!! ACAACAAAAGCACCTTCAAC+TGG + chr3.3:47821495-47821514 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr3.3:47822586-47822605 MS.gene95387:intron 40.0%
!! GCGTTTGTTGTTATGGGTTT+GGG + chr3.3:47820570-47820589 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr3.3:47822585-47822604 MS.gene95387:intron 40.0%
!! TGCGTTTGTTGTTATGGGTT+TGG + chr3.3:47820571-47820590 None:intergenic 40.0%
!! TTGCGAGTTACATTTTGGAG+CGG - chr3.3:47819511-47819530 MS.gene95387:intron 40.0%
AACCGAAGCTTCTCTTCTGA+TGG + chr3.3:47819383-47819402 None:intergenic 45.0%
AATCAATGTCGGTGTGTCAC+AGG - chr3.3:47820033-47820052 MS.gene95387:intron 45.0%
AGACACACTTAACCCTCCAA+TGG + chr3.3:47819541-47819560 None:intergenic 45.0%
ATCACTGTTCCACCAGTTGA+AGG - chr3.3:47821480-47821499 MS.gene95387:intron 45.0%
ATGTCTGGTGGTAAAAAGGG+TGG - chr3.3:47819407-47819426 MS.gene95387:intron 45.0%
CGGATCTGGACTCAAGATAT+TGG - chr3.3:47820356-47820375 MS.gene95387:intron 45.0%
CGGTAAAATTCGCAATGTCG+GGG - chr3.3:47821762-47821781 MS.gene95387:intron 45.0%
CTCTTCTCCCTGTAAAAAGG+AGG + chr3.3:47821097-47821116 None:intergenic 45.0%
CTGGACTCAAGATATTGGTG+AGG - chr3.3:47820361-47820380 MS.gene95387:intron 45.0%
GACAGGTCCCTAATCAATGT+CGG - chr3.3:47820022-47820041 MS.gene95387:intron 45.0%
GATGAATCAGTTAGGTTCGG+GGG - chr3.3:47820272-47820291 MS.gene95387:intron 45.0%
GGGAGAGAAATATGTGATGG+AGG - chr3.3:47823183-47823202 MS.gene95387:CDS 45.0%
GGTCGCAAATCTCTTCTCTA+CGG + chr3.3:47819250-47819269 None:intergenic 45.0%
GTGTTTCAAGAACAAGTGGG+TGG - chr3.3:47821423-47821442 MS.gene95387:intron 45.0%
GTTACCTCTTTCCATCCTTC+TGG + chr3.3:47821198-47821217 None:intergenic 45.0%
GTTCCTTAACATGTGCCCTT+AGG - chr3.3:47822715-47822734 MS.gene95387:intron 45.0%
TAAGCCAGAAGGATGGAAAG+AGG - chr3.3:47821191-47821210 MS.gene95387:CDS 45.0%
TGCAAAAGCTTGCGAGAACT+GGG - chr3.3:47819274-47819293 MS.gene95387:CDS 45.0%
TGCCATCAGAAGAGAAGCTT+CGG - chr3.3:47819378-47819397 MS.gene95387:intron 45.0%
TTGCAAAAGCTTGCGAGAAC+TGG - chr3.3:47819273-47819292 MS.gene95387:CDS 45.0%
! AAGCTTCGGTTTGACATGTC+TGG - chr3.3:47819392-47819411 MS.gene95387:intron 45.0%
! AGGTGTTATCTGAGGCTATG+GGG - chr3.3:47821265-47821284 MS.gene95387:intron 45.0%
! CACTCGAGTCTAGTTTCATC+AGG - chr3.3:47819132-47819151 MS.gene95387:CDS 45.0%
! GACTCGAGTGTGTTTTTCTG+AGG + chr3.3:47819122-47819141 None:intergenic 45.0%
! GAGGTGTTATCTGAGGCTAT+GGG - chr3.3:47821264-47821283 MS.gene95387:intron 45.0%
! GTGACACACCGACATTGATT+AGG + chr3.3:47820033-47820052 None:intergenic 45.0%
! TACCCTTTGAAGGTCAGAGA+GGG - chr3.3:47823163-47823182 MS.gene95387:CDS 45.0%
! TCTCGCAAGCTTTTGCAATC+TGG + chr3.3:47819271-47819290 None:intergenic 45.0%
! TGAGGTGTTATCTGAGGCTA+TGG - chr3.3:47821263-47821282 MS.gene95387:intron 45.0%
!! ACAAAAGCACCTTCAACTGG+TGG + chr3.3:47821492-47821511 None:intergenic 45.0%
!! CAAGAGTAAGGTCAGGTTGA+GGG + chr3.3:47821365-47821384 None:intergenic 45.0%
!! TTCCATCCTTCTGGCTTATC+TGG + chr3.3:47821189-47821208 None:intergenic 45.0%
!!! AAGTTTTTTGGTACGCCCTC+CGG + chr3.3:47822256-47822275 None:intergenic 45.0%
!!! ATTTTGGAGCGGAAAGCCAT+TGG - chr3.3:47819522-47819541 MS.gene95387:intron 45.0%
!!! GGTGAGGCACAATTTTTTCG+CGG - chr3.3:47820377-47820396 MS.gene95387:intron 45.0%
!!! AAAAATTATTATTTTTGAAT+TGG - chr3.3:47820319-47820338 MS.gene95387:intron 5.0%
!!! AAATTTTAGAATAATAAAAT+TGG - chr3.3:47820978-47820997 MS.gene95387:CDS 5.0%
!!! TAAAAACTAATTTTTTTTTT+TGG - chr3.3:47821861-47821880 MS.gene95387:intron 5.0%
AACACCAGAGTGATTGTGCC+AGG + chr3.3:47821408-47821427 None:intergenic 50.0%
AATCAGTTAGGTTCGGGGGA+AGG - chr3.3:47820276-47820295 MS.gene95387:intron 50.0%
CCAAGTTGTTGATCATGGCG+TGG - chr3.3:47819304-47819323 MS.gene95387:intron 50.0%
CCACGCCATGATCAACAACT+TGG + chr3.3:47819307-47819326 None:intergenic 50.0%
CCTCAACCTGACCTTACTCT+TGG - chr3.3:47821363-47821382 MS.gene95387:intron 50.0%
CTCCCTCTCTGACCTTCAAA+GGG + chr3.3:47823168-47823187 None:intergenic 50.0%
CTGAAACGACACACTGATCC+TGG - chr3.3:47821387-47821406 MS.gene95387:intron 50.0%
GCAAAAGCTTGCGAGAACTG+GGG - chr3.3:47819275-47819294 MS.gene95387:CDS 50.0%
GTCGTTTCAGGCCAAGAGTA+AGG + chr3.3:47821377-47821396 None:intergenic 50.0%
TCTCCCTCTCTGACCTTCAA+AGG + chr3.3:47823169-47823188 None:intergenic 50.0%
TGATCCTGGCACAATCACTC+TGG - chr3.3:47821401-47821420 MS.gene95387:intron 50.0%
TTCAGGCCAAGAGTAAGGTC+AGG + chr3.3:47821372-47821391 None:intergenic 50.0%
! AATTGGTTGGTATGCAGGGG+CGG - chr3.3:47820336-47820355 MS.gene95387:intron 50.0%
! CCAAGAGTAAGGTCAGGTTG+AGG + chr3.3:47821366-47821385 None:intergenic 50.0%
! CTTCGGTTTGACATGTCTGG+TGG - chr3.3:47819395-47819414 MS.gene95387:intron 50.0%
! GGGTCCCTACTTTGTTATGG+TGG - chr3.3:47820164-47820183 MS.gene95387:intron 50.0%
! GTACCCTTTGAAGGTCAGAG+AGG - chr3.3:47823162-47823181 MS.gene95387:CDS 50.0%
! GTTATGGTGGAACCTTTGGC+TGG - chr3.3:47820177-47820196 MS.gene95387:intron 50.0%
! GTTCTAAACATGGGCGGATC+TGG - chr3.3:47819645-47819664 MS.gene95387:intron 50.0%
! TGCCCTAAGGGCACATGTTA+AGG + chr3.3:47822721-47822740 None:intergenic 50.0%
!! AAAATCAGCTTGGGCTGGTG+TGG - chr3.3:47820798-47820817 MS.gene95387:intron 50.0%
!! CAGGATCAGTGTGTCGTTTC+AGG + chr3.3:47821389-47821408 None:intergenic 50.0%
!! GACGAAAGCACTCGTCCAAA+AGG - chr3.3:47819155-47819174 MS.gene95387:CDS 50.0%
!!! AGGTCAGGTTGAGGGCATTT+TGG + chr3.3:47821357-47821376 None:intergenic 50.0%
!!! GGTCAGGTTGAGGGCATTTT+GGG + chr3.3:47821356-47821375 None:intergenic 50.0%
AGGTGGCCAGATAAGCCAGA+AGG - chr3.3:47821180-47821199 MS.gene95387:CDS 55.0%
CTAGAGATGAGGGTGAGACG+TGG - chr3.3:47821457-47821476 MS.gene95387:intron 55.0%
GGCCAGATAAGCCAGAAGGA+TGG - chr3.3:47821184-47821203 MS.gene95387:CDS 55.0%
TGGAGCGGAAAGCCATTGGA+GGG - chr3.3:47819526-47819545 MS.gene95387:intron 55.0%
TGGTGGAACCTTTGGCTGGA+GGG - chr3.3:47820181-47820200 MS.gene95387:intron 55.0%
TTGGAGCGGAAAGCCATTGG+AGG - chr3.3:47819525-47819544 MS.gene95387:intron 55.0%
! ATGGTGGAACCTTTGGCTGG+AGG - chr3.3:47820180-47820199 MS.gene95387:intron 55.0%
AAGACTCCCCCTCCAGCCAA+AGG + chr3.3:47820192-47820211 None:intergenic 60.0%
AGTTAGGTTCGGGGGAAGGC+AGG - chr3.3:47820280-47820299 MS.gene95387:intron 60.0%
GACCTGAACAGGTCCTGGTG+TGG + chr3.3:47820830-47820849 None:intergenic 60.0%
GGTGGAACCTTTGGCTGGAG+GGG - chr3.3:47820182-47820201 MS.gene95387:intron 60.0%
GTGGAACCTTTGGCTGGAGG+GGG - chr3.3:47820183-47820202 MS.gene95387:intron 60.0%
GTTAGGTTCGGGGGAAGGCA+GGG - chr3.3:47820281-47820300 MS.gene95387:intron 60.0%
TGCCACACCAGGACCTGTTC+AGG - chr3.3:47820825-47820844 MS.gene95387:CDS 60.0%
TTGGTATGCAGGGGCGGATC+TGG - chr3.3:47820342-47820361 MS.gene95387:intron 60.0%
!! GCCACCAACGTCGTCGATTC+CGG + chr3.3:47819228-47819247 None:intergenic 60.0%
CAACAGGGGCGGACCTGAAC+AGG + chr3.3:47820841-47820860 None:intergenic 65.0%
CTCGCCGGAATCGACGACGT+TGG - chr3.3:47819221-47819240 MS.gene95387:CDS 65.0%
CTGTTCAGGTCCGCCCCTGT+TGG - chr3.3:47820839-47820858 MS.gene95387:CDS 65.0%
GCCGGAATCGACGACGTTGG+TGG - chr3.3:47819224-47819243 MS.gene95387:CDS 65.0%
GGTGTGGCACTTGCCACACC+AGG - chr3.3:47820814-47820833 MS.gene95387:intron 65.0%
GGGCGGACCTGAACAGGTCC+TGG + chr3.3:47820835-47820854 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 47819089 47823267 47819089 ID=MS.gene95387
chr3.3 mRNA 47819089 47823267 47819089 ID=MS.gene95387.t1;Parent=MS.gene95387
chr3.3 exon 47822917 47823267 47822917 ID=MS.gene95387.t1.exon1;Parent=MS.gene95387.t1
chr3.3 CDS 47822917 47823267 47822917 ID=cds.MS.gene95387.t1;Parent=MS.gene95387.t1
chr3.3 exon 47820820 47821248 47820820 ID=MS.gene95387.t1.exon2;Parent=MS.gene95387.t1
chr3.3 CDS 47820820 47821248 47820820 ID=cds.MS.gene95387.t1;Parent=MS.gene95387.t1
chr3.3 exon 47819089 47819304 47819089 ID=MS.gene95387.t1.exon3;Parent=MS.gene95387.t1
chr3.3 CDS 47819089 47819304 47819089 ID=cds.MS.gene95387.t1;Parent=MS.gene95387.t1
Gene Sequence

>MS.gene95387

ATGGCACCAGCGAAAACTCTCGATTATATACCTCAGAAAAACACACTCGAGTCTAGTTTCATCAGGGACGAAAGCACTCGTCCAAAAGGTGCTTACAATCAGTTCAGCAATGATGAGATTCCAATTATTTCTCTCGCCGGAATCGACGACGTTGGTGGCCGTAGAGAAGAGATTTGCGACCAGATTGCAAAAGCTTGCGAGAACTGGGGTATCTTCCAAGTTGTTGATCATGGCGTGGATCAAAAGCTCATTTCTGAGATGACCAGTTTTTCTAAAGAGTTCTTTGATTTGCCATCAGAAGAGAAGCTTCGGTTTGACATGTCTGGTGGTAAAAAGGGTGGCTTCGTAGTAGTAAGATTTTTTTTTTCTTCTTTTTCTCTCTTTCTTTCACTTCTCACACACTTGCATTTTTAGGGTGTATTTTGCGAGTTACATTTTGGAGCGGAAAGCCATTGGAGGGTTAAGTGTGTCTTAGAACATACCAATTAGTTTTTATGTGGGAGTGTTTTACTAGATGCATTTAACCAATTTGTAGTTATCACTTGTTAAAATACTCGTTCTAAACATGGGCGGATCTGGACTAAAAAATAAGTTAGTGTATTCTAGCAAATGTCTGTAGGAGTTGCTAACATACACCCACTTAATTTTTAGAAGGTGTATTATAGCAACATATACCTTGAGGTGTATTTATCAATTTTTTAGTTATAACTTGCTAAAACACCCGCACATAAAAACTAGTGAGTGTGTTCTATCAAATTTTTATATATATTATTAATTGATTGATGTGGCGATTATAAATGTTTTATTAATTGTGTGTGCAAAGTTGTTTTAAACTGTTAGTCTTGATTAATATTGTGTATTTGGTTCAATTTTCGGTTTAATGTTTACACATATCACACAAACTATACACACACAAAATAAGTTCTAATTATGGACAGGTCCCTAATCAATGTCGGTGTGTCACAGGTTGTGCATTACGTAGACTTTTCTCTTCAAATGGGTTAGAATTTGTCAAATTGCAACTTGCAACCAACCAACACTTTCTCTTCAAATGAGAGGACTAGATTTCTCAAATGGGTCCCTACTTTGTTATGGTGGAACCTTTGGCTGGAGGGGGAGTCTTGAAAAATAGATTCAGTCGACTCTTTAAGTTAGTTGAAAACATAATGGTACCAATTTTAAAGATGAATCAGTTAGGTTCGGGGGAAGGCAGGGCTATCTAGAAAAAAAAAAAATTATTATTTTTGAATTGGTTGGTATGCAGGGGCGGATCTGGACTCAAGATATTGGTGAGGCACAATTTTTTCGCGGTTAAATAAGTAAATAAAATGTACACATAAGTACCGAACGTGAGTTAATTGCCGTTTGTAGCGAGTGACAATTAACTTGCATTGGGTTTATTAGGGTAAATTTTGGGTGTAAATGAGCAATTTTAAAAATGAGAAGATTGATTTTAAATAACATATGCAAATATAAGGCCCAAACCCATAACAACAAACGCACATAACCCTAAATATTTGATACTCATAGTCACATTATCACAACCGCTGCAATACTTTTCTTTTCTGCTTCTTTCTTCTTACGGTTCCATGGTTTCTACATATGATTTCTTCTTCTTTTCTACTGGTACTTCGCTTGTGATTGATGCGTTTACATTAAGTTTATTATCTCAGTTCATTGTTTCATATATGGAGAAAAAAAAATGAAAAAAAATCAGCTTGGGCTGGTGTGGCACTTGCCACACCAGGACCTGTTCAGGTCCGCCCCTGTTGGTATGTATTTATTTCCAGCTATCCCAAATAATAAACATTGAATTATAGGGTGCATATAATATGAACCGGTACGAGCCATTCAAAAATATTTACATATGGACCTTTACCAATAAAAGAAAATTTTAGAATAATAAAATTGGAAGAACAAAATTATATTTATCTAGATTTATTAAAAAAATGACATCAATATGTTTATAATTATATATGCACTCAAACTACTTATATATATTGGACCTCCTTTTTACAGGGAGAAGAGATGAATGATTGGAGAGAGCGAATGCTATACTTTTCATACCCAATTAGTGAAAGAGATTATTCAAGGTGGCCAGATAAGCCAGAAGGATGGAAAGAGGTAACAGAAGAATACAGTGAGAAGCTAATGAGTTTAACATGCAAGTTGTTTGAGGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTTTGACAAAAGCATGTGTTGATATGGTTCAAAAGATTGTGGTAAATTACTACCCAAAATGCCCTCAACCTGACCTTACTCTTGGCCTGAAACGACACACTGATCCTGGCACAATCACTCTGGTGTTTCAAGAACAAGTGGGTGGCCTTCAAGTTACTAGAGATGAGGGTGAGACGTGGATCACTGTTCCACCAGTTGAAGGTGCTTTTGTTGTTGATATTGGAGATCATGGTCACGTAAGTACACTTTTTCTTTTTCTTGTATGCAGTTAGAGTGCAAATATGGTTTATGATAGAACACTATGGCGTAATTTGATTCATGTAGCCGACCCTATTTAATGGGATAAGGCTTGGTTGTTGTTGTAGTTAGAATGCAAAGAAAAATGTGAATTTTTTTTTTTACCAACTATATGGTTTTAAATTGCAATTGAGGTCATAGTGTAGTTAAGGTGAACCCTAATACGGTAAAATTCGCAATGTCGGGGCGATATTGCAACACAATTATTGTTCTTACAACAATTTAAAACAATTTGTCAAAAATCAAAAAATTTAAAACAATGCTAAAAACTAATTTTTTTTTTTGGTTACAGTGCTAAAACAATGCTAAAAACTAATATGTCCTTGAACTATTATTATTATTGTACTTATGATGTAGGTCCTGAATCTTTTAGACTTTAAAAACTTGTCATTTAAATTGTATTTCTTCTGGTTTCAAATGTAAGAAACAAAAAAATAAAATTGGTGGTCTCAAATATAAGAAAAAGTATAGTAAAATGAACTTATTAAAGGCCACAATTCCAAATTTACCCTCATTAAACTCACTTTTCTTTAATGTCTTTACTACTCCAAGACAAGGGTAAAATTGAAAAAATGTAACTTTTTATAATAACTTAAATGTGGTCAATCCACTTTCTTACTATGTGTGCATTATTTTTTGTTTCTTACATTTGAGACCGGAGGGCGTACCAAAAAACTTGTCATTGAATAAATACAATAGGCATGGTTCGTGAACTATGATGTAGGTCCTGAATTATTATTTTTTGACAAAAATGTAGGTCCCGAATTATTAGACTTTAAAAACTTGTCATTTAAATTGTACCAAAAAACAAAAAACTTGTCATTGAATAAATACAATAGGCATAGCTCGTGAATTATGATGTAGGTCCTGAATTATTAGACTTTAAAAACTTGTCATTTAAATTGTACCAAAAAACAAAAAACAAACTTGTCATTGAATAAATACAATAGCTATAGCTCGTGAATTAAGTGTTCATATAAAATTGGGTCATGTTAACTTGTGCCCTTAGGGCACATGTTAAGTAATCCAAAAAAAGAAAATTTGCATTGGAAAACATGATATTTTAACTTTCTAGAAGTTGACTACACGACTTTTGATGCGTATATTTCTATAATGAGTTCCTTAACATGTGCCCTTAGGGCACAAGTTAACATTTGCCTATAAAATTATATCTATTTGGTCATACTTCACATGGTCCAATTTATTTTGGCAAATCTTGCAAAATGATTTTAAGCTCAATATTTTAAGAAGTGTTGGGAAAGAGTTTGTGAATATGAATTACTCAAAAAAAAAAAAAAAAGACATTCATAATTTTCAAATACTAACGCAAAAAAAAAAGCGGAAATGCGAGCACGTAAGTATCCGTCTTTTCTTCAATACTACGTAATCATTTTGCTACTATGTAGTGTACACTTTATTACTACATATTATTAATTTGCGCGTGGTGCATGCAGTATTTAAGTAATGGACGGTTCAAAAGAGCTGATCACAGGGCAGTGGTGAATTCAAGCTACAGCCGTTTATCCGTAGCAACATTCCAATATCCAGCAACAGATGCAATTGTGTACCCTTTGAAGGTCAGAGAGGGAGAGAAATATGTGATGGAGGAACACCTCACTTTTGCTGAAATATACAGGAGGAACATGAGCAATTACCTTGAGCAAAAGTGA
Protein sequence

>MS.gene95387.t1

MAPAKTLDYIPQKNTLESSFIRDESTRPKGAYNQFSNDEIPIISLAGIDDVGGRREEICDQIAKACENWGIFQVVDHGVDQKLISEMTSFSKEFFDLPSEEKLRFDMSGGKKGGFVVGEEMNDWRERMLYFSYPISERDYSRWPDKPEGWKEVTEEYSEKLMSLTCKLFEVLSEAMGLEKEALTKACVDMVQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLVFQEQVGGLQVTRDEGETWITVPPVEGAFVVDIGDHGHYLSNGRFKRADHRAVVNSSYSRLSVATFQYPATDAIVYPLKVREGEKYVMEEHLTFAEIYRRNMSNYLEQK