Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95827.t1 | XP_013452366.1 | 95.7 | 235 | 10 | 0 | 4 | 238 | 63 | 297 | 2.00E-128 | 468.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95827.t1 | Q8GXT7 | 48.3 | 240 | 103 | 4 | 4 | 238 | 68 | 291 | 2.7e-57 | 223.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95827.t1 | A0A072U9B5 | 95.7 | 235 | 10 | 0 | 4 | 238 | 63 | 297 | 1.4e-128 | 468.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95827 | MS.gene56734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95827.t1 | MTR_6g053720 | 95.745 | 235 | 10 | 0 | 4 | 238 | 63 | 297 | 1.72e-161 | 449 |
| MS.gene95827.t1 | MTR_4g118560 | 42.748 | 262 | 114 | 6 | 4 | 238 | 46 | 298 | 8.61e-63 | 198 |
| MS.gene95827.t1 | MTR_6g009440 | 42.520 | 254 | 125 | 7 | 4 | 238 | 60 | 311 | 1.02e-62 | 198 |
| MS.gene95827.t1 | MTR_2g020800 | 41.473 | 258 | 123 | 6 | 5 | 238 | 50 | 303 | 5.97e-59 | 188 |
| MS.gene95827.t1 | MTR_2g020800 | 41.406 | 256 | 124 | 6 | 5 | 238 | 50 | 301 | 2.54e-58 | 187 |
| MS.gene95827.t1 | MTR_3g114670 | 37.755 | 196 | 102 | 6 | 5 | 180 | 79 | 274 | 1.34e-31 | 117 |
| MS.gene95827.t1 | MTR_8g074880 | 34.343 | 198 | 110 | 5 | 4 | 181 | 124 | 321 | 6.70e-31 | 116 |
| MS.gene95827.t1 | MTR_8g074890 | 35.533 | 197 | 107 | 6 | 4 | 180 | 75 | 271 | 8.96e-31 | 115 |
| MS.gene95827.t1 | MTR_8g074810 | 37.245 | 196 | 103 | 7 | 4 | 179 | 76 | 271 | 2.22e-29 | 111 |
| MS.gene95827.t1 | MTR_5g022960 | 32.821 | 195 | 111 | 5 | 5 | 179 | 88 | 282 | 7.06e-29 | 110 |
| MS.gene95827.t1 | MTR_3g114590 | 34.555 | 191 | 111 | 4 | 6 | 182 | 75 | 265 | 9.76e-28 | 110 |
| MS.gene95827.t1 | MTR_3g114590 | 29.730 | 185 | 97 | 5 | 12 | 180 | 293 | 460 | 1.28e-14 | 73.2 |
| MS.gene95827.t1 | MTR_8g074830 | 33.163 | 196 | 111 | 6 | 4 | 179 | 79 | 274 | 2.02e-27 | 106 |
| MS.gene95827.t1 | MTR_1g116810 | 34.021 | 194 | 108 | 5 | 4 | 179 | 84 | 275 | 5.08e-26 | 102 |
| MS.gene95827.t1 | MTR_3g114610 | 32.105 | 190 | 114 | 4 | 6 | 180 | 107 | 296 | 1.49e-23 | 96.7 |
| MS.gene95827.t1 | MTR_8g074870 | 30.928 | 194 | 102 | 6 | 4 | 178 | 37 | 217 | 4.84e-22 | 90.9 |
| MS.gene95827.t1 | MTR_5g016090 | 24.742 | 194 | 123 | 5 | 7 | 179 | 95 | 286 | 1.40e-14 | 71.6 |
| MS.gene95827.t1 | MTR_4g095370 | 26.471 | 136 | 93 | 3 | 48 | 178 | 154 | 287 | 3.05e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95827.t1 | AT4G25600 | 48.148 | 243 | 105 | 4 | 1 | 238 | 13 | 239 | 4.70e-74 | 225 |
| MS.gene95827.t1 | AT4G25600 | 48.148 | 243 | 105 | 4 | 1 | 238 | 1 | 227 | 6.08e-74 | 224 |
| MS.gene95827.t1 | AT4G25600 | 48.333 | 240 | 103 | 4 | 4 | 238 | 7 | 230 | 7.80e-74 | 224 |
| MS.gene95827.t1 | AT4G25600 | 47.737 | 243 | 106 | 4 | 1 | 238 | 65 | 291 | 1.03e-72 | 223 |
| MS.gene95827.t1 | AT3G28490 | 43.922 | 255 | 116 | 6 | 4 | 238 | 41 | 288 | 1.65e-66 | 207 |
| MS.gene95827.t1 | AT3G28480 | 41.732 | 254 | 125 | 6 | 4 | 238 | 65 | 314 | 1.74e-63 | 201 |
| MS.gene95827.t1 | AT3G28480 | 40.458 | 262 | 125 | 6 | 4 | 238 | 65 | 322 | 3.36e-62 | 197 |
| MS.gene95827.t1 | AT3G06300 | 41.634 | 257 | 124 | 6 | 4 | 238 | 47 | 299 | 2.98e-61 | 194 |
| MS.gene95827.t1 | AT5G18900 | 37.891 | 256 | 133 | 5 | 5 | 238 | 47 | 298 | 1.27e-56 | 182 |
| MS.gene95827.t1 | AT4G35810 | 34.673 | 199 | 110 | 4 | 4 | 182 | 89 | 287 | 1.39e-31 | 117 |
| MS.gene95827.t1 | AT4G35810 | 34.673 | 199 | 110 | 4 | 4 | 182 | 89 | 287 | 1.39e-31 | 117 |
| MS.gene95827.t1 | AT1G20270 | 33.503 | 197 | 111 | 5 | 5 | 181 | 86 | 282 | 8.44e-30 | 112 |
| MS.gene95827.t1 | AT2G17720 | 34.184 | 196 | 109 | 5 | 6 | 181 | 91 | 286 | 1.23e-29 | 112 |
| MS.gene95827.t1 | AT5G66060 | 32.990 | 194 | 110 | 4 | 6 | 179 | 89 | 282 | 2.02e-27 | 106 |
| MS.gene95827.t1 | AT2G43080 | 28.788 | 198 | 125 | 3 | 4 | 185 | 86 | 283 | 1.68e-22 | 93.6 |
| MS.gene95827.t1 | AT4G35820 | 33.333 | 183 | 82 | 7 | 5 | 164 | 98 | 263 | 8.05e-17 | 77.8 |
| MS.gene95827.t1 | AT2G23096 | 28.934 | 197 | 110 | 7 | 4 | 177 | 77 | 266 | 3.08e-16 | 76.3 |
| MS.gene95827.t1 | AT5G66060 | 33.071 | 127 | 69 | 3 | 6 | 118 | 89 | 213 | 8.90e-14 | 68.9 |
| MS.gene95827.t1 | AT4G33910 | 29.630 | 135 | 86 | 5 | 51 | 179 | 150 | 281 | 2.19e-13 | 68.6 |
Find 58 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACCACATATCGCCTTTA+AGG | 0.151018 | 6.2:-44134923 | None:intergenic |
| CCTTTACAGGTCATGCATTA+TGG | 0.184280 | 6.2:+44134246 | MS.gene95827:CDS |
| TTTCACAAACAAAACCAAAT+TGG | 0.191233 | 6.2:+44134299 | MS.gene95827:CDS |
| GCTCGATGCCCTGTCCTTAA+AGG | 0.210672 | 6.2:+44134909 | MS.gene95827:CDS |
| TCTTGTCAGGAGATGTATTT+AGG | 0.219035 | 6.2:-44134875 | None:intergenic |
| GTGTGACTACCTTATTTATT+TGG | 0.242556 | 6.2:+44132085 | MS.gene95827:CDS |
| AGAGAACAGCAAGCCTTTAC+AGG | 0.299865 | 6.2:+44134233 | MS.gene95827:intron |
| CTTTACAGGTCATGCATTAT+GGG | 0.305434 | 6.2:+44134247 | MS.gene95827:CDS |
| GCCGTACTCACCACTGATTC+AGG | 0.315848 | 6.2:-44134396 | None:intergenic |
| AGAACTGCATTCCCTTTAAC+TGG | 0.334718 | 6.2:-44134837 | None:intergenic |
| AGAGGAAACTTCATTGGATA+TGG | 0.342638 | 6.2:+44132661 | MS.gene95827:CDS |
| TTCACAAACAAAACCAAATT+GGG | 0.356049 | 6.2:+44134300 | MS.gene95827:CDS |
| AGGTCCGGTTGATCCCAATT+TGG | 0.361801 | 6.2:-44134313 | None:intergenic |
| AAAGAAAGAGGAAACTTCAT+TGG | 0.368859 | 6.2:+44132655 | MS.gene95827:CDS |
| GGGATCAACCGGACCTTTGA+TGG | 0.371144 | 6.2:+44134320 | MS.gene95827:CDS |
| TGCAACATACCAAATAAATA+AGG | 0.373711 | 6.2:-44132094 | None:intergenic |
| GAGGTTCTCCAACCAGTTAA+AGG | 0.393818 | 6.2:+44134825 | MS.gene95827:CDS |
| TTGAAGAAAGACTTTCGGTT+TGG | 0.401961 | 6.2:+44134103 | MS.gene95827:CDS |
| AAAACCAAATTGGGATCAAC+CGG | 0.420089 | 6.2:+44134309 | MS.gene95827:CDS |
| GTTGGATCTCCTGATTACTA+TGG | 0.429222 | 6.2:+44135086 | MS.gene95827:CDS |
| CGACAAGTACCATAGTAATC+AGG | 0.442588 | 6.2:-44135095 | None:intergenic |
| GAGGATTGAAGAAAGACTTT+CGG | 0.449118 | 6.2:+44134098 | MS.gene95827:CDS |
| TCTCCCGTTGCTGCCCAAGC+TGG | 0.465114 | 6.2:-44135038 | None:intergenic |
| CTGCATTCCCTTTAACTGGT+TGG | 0.472708 | 6.2:-44134833 | None:intergenic |
| AGATGATAGTTGTCCAGCTT+GGG | 0.474954 | 6.2:+44135025 | MS.gene95827:CDS |
| CACTGTTGCCATCAAAGGTC+CGG | 0.475147 | 6.2:-44134328 | None:intergenic |
| TGTCCAGCTTGGGCAGCAAC+GGG | 0.476542 | 6.2:+44135035 | MS.gene95827:CDS |
| GCGTGTAAGCTACTCTTGTC+AGG | 0.476850 | 6.2:-44134888 | None:intergenic |
| AGGTTCTCCAACCAGTTAAA+GGG | 0.477047 | 6.2:+44134826 | MS.gene95827:CDS |
| CCATAATGCATGACCTGTAA+AGG | 0.487176 | 6.2:-44134246 | None:intergenic |
| AAGATGATAGTTGTCCAGCT+TGG | 0.488359 | 6.2:+44135024 | MS.gene95827:CDS |
| CGGAACCCTGTCTACATGGT+TGG | 0.491604 | 6.2:+44135068 | MS.gene95827:CDS |
| ATTTGACCAGCTGCTACTCT+TGG | 0.492285 | 6.2:-44134787 | None:intergenic |
| GGAGATCCAACCATGTAGAC+AGG | 0.498626 | 6.2:-44135074 | None:intergenic |
| TTGTCCAGCTTGGGCAGCAA+CGG | 0.515020 | 6.2:+44135034 | MS.gene95827:CDS |
| CACATATCGCCTTTAAGGAC+AGG | 0.515314 | 6.2:-44134918 | None:intergenic |
| CTGATTACTATGGTACTTGT+CGG | 0.527249 | 6.2:+44135096 | MS.gene95827:CDS |
| TCAACGGAACCCTGTCTACA+TGG | 0.530423 | 6.2:+44135064 | MS.gene95827:CDS |
| TGGTGGCTATTCAAAGAAAG+AGG | 0.553698 | 6.2:+44132643 | MS.gene95827:CDS |
| AGAATCACTGTTGCCATCAA+AGG | 0.553753 | 6.2:-44134333 | None:intergenic |
| CACCACTGATTCAGGAAAGA+GGG | 0.567187 | 6.2:-44134388 | None:intergenic |
| ATCTCTCGAATGCTACTCAA+GGG | 0.570249 | 6.2:+44134358 | MS.gene95827:CDS |
| TCACCACTGATTCAGGAAAG+AGG | 0.571225 | 6.2:-44134389 | None:intergenic |
| CATCTCTCGAATGCTACTCA+AGG | 0.573935 | 6.2:+44134357 | MS.gene95827:CDS |
| AACCCTCTTTCCTGAATCAG+TGG | 0.574378 | 6.2:+44134386 | MS.gene95827:CDS |
| CACAGACCAAGAGTAGCAGC+TGG | 0.591686 | 6.2:+44134781 | MS.gene95827:intron |
| CTGTCCTTAAAGGCGATATG+TGG | 0.609635 | 6.2:+44134919 | MS.gene95827:CDS |
| TATACAAGATCGATCAGTGG+AGG | 0.618199 | 6.2:+44134960 | MS.gene95827:CDS |
| AGGGAAAGTCTCAACTACGC+TGG | 0.624281 | 6.2:+44134980 | MS.gene95827:CDS |
| TTTAGGATGATATTGTCAAG+AGG | 0.632824 | 6.2:+44134079 | MS.gene95827:intron |
| ATACAAGATCGATCAGTGGA+GGG | 0.641541 | 6.2:+44134961 | MS.gene95827:CDS |
| CAGCAACGGGAGAATGTCAA+CGG | 0.647505 | 6.2:+44135048 | MS.gene95827:CDS |
| TTCTATACAAGATCGATCAG+TGG | 0.652183 | 6.2:+44134957 | MS.gene95827:CDS |
| TCTCTCGAATGCTACTCAAG+GGG | 0.663851 | 6.2:+44134359 | MS.gene95827:CDS |
| GAGATCCAACCATGTAGACA+GGG | 0.668526 | 6.2:-44135073 | None:intergenic |
| ACATATCGCCTTTAAGGACA+GGG | 0.680203 | 6.2:-44134917 | None:intergenic |
| CTCTCGAATGCTACTCAAGG+GGG | 0.692797 | 6.2:+44134360 | MS.gene95827:CDS |
| AAATTGTAGAAATAACAGTG+AGG | 0.789611 | 6.2:+44134806 | MS.gene95827:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTATATTATAAGTAGA+GGG | + | chr6.2:44132395-44132414 | MS.gene95827:intron | 10.0% |
| !! | TTTAATTATATTATAAGTAG+AGG | + | chr6.2:44132394-44132413 | MS.gene95827:intron | 10.0% |
| !!! | TTTTAAATTACAGAAAATTA+TGG | - | chr6.2:44133876-44133895 | None:intergenic | 10.0% |
| !! | AAACGGAAAAAAAAAATTAA+GGG | - | chr6.2:44134510-44134529 | None:intergenic | 15.0% |
| !! | ATCAATGTAAAACTAATTTA+TGG | + | chr6.2:44132330-44132349 | MS.gene95827:intron | 15.0% |
| !! | TAAAAATAACAGTGTAATTT+AGG | + | chr6.2:44134708-44134727 | MS.gene95827:intron | 15.0% |
| !! | TAATTATATTATAAGTAGAG+GGG | + | chr6.2:44132396-44132415 | MS.gene95827:intron | 15.0% |
| !! | TATGTTCATTAAAGATATAT+CGG | - | chr6.2:44132181-44132200 | None:intergenic | 15.0% |
| !! | TTATTGTCGAAAATTAATAT+AGG | + | chr6.2:44133560-44133579 | MS.gene95827:intron | 15.0% |
| !!! | AAATTTGGAATTAACTAATT+AGG | - | chr6.2:44133659-44133678 | None:intergenic | 15.0% |
| !!! | ATTTTTCTATTAGTTTGTTA+TGG | + | chr6.2:44130486-44130505 | MS.gene95827:intron | 15.0% |
| !!! | GTAATTTAAAATATCATAAC+CGG | + | chr6.2:44133885-44133904 | MS.gene95827:intron | 15.0% |
| !!! | TAAATTACACTGTTATTTTT+AGG | - | chr6.2:44134709-44134728 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGAGATAATAG+TGG | + | chr6.2:44130556-44130575 | MS.gene95827:intron | 15.0% |
| !!! | TTTTTCTATTAGTTTGTTAT+GGG | + | chr6.2:44130487-44130506 | MS.gene95827:intron | 15.0% |
| !! | AAAGTAACATTTATAACTGA+AGG | - | chr6.2:44134543-44134562 | None:intergenic | 20.0% |
| !! | AAATATACAGTTACAAATGT+GGG | + | chr6.2:44132274-44132293 | MS.gene95827:intron | 20.0% |
| !! | AACGGAAAAAAAAAATTAAG+GGG | - | chr6.2:44134509-44134528 | None:intergenic | 20.0% |
| !! | AAGTAACATTTATAACTGAA+GGG | - | chr6.2:44134542-44134561 | None:intergenic | 20.0% |
| !! | AATAAATGTTCATTTCCATT+TGG | + | chr6.2:44130522-44130541 | MS.gene95827:intron | 20.0% |
| !! | AGTTGTTTATTAGTAGAATT+CGG | + | chr6.2:44131298-44131317 | MS.gene95827:intron | 20.0% |
| !! | ATAAGTATAGAAAAAAGTTC+AGG | - | chr6.2:44132694-44132713 | None:intergenic | 20.0% |
| !! | ATTTACCATTTACTTAATGT+AGG | + | chr6.2:44132916-44132935 | MS.gene95827:intron | 20.0% |
| !! | CATAATCAAAAAGAAAACAA+AGG | - | chr6.2:44134749-44134768 | None:intergenic | 20.0% |
| !! | GAAACGGAAAAAAAAAATTA+AGG | - | chr6.2:44134511-44134530 | None:intergenic | 20.0% |
| !! | GTGTAATGATTGTAATTTAA+GGG | + | chr6.2:44134646-44134665 | MS.gene95827:intron | 20.0% |
| !! | TAAATATACAGTTACAAATG+TGG | + | chr6.2:44132273-44132292 | MS.gene95827:intron | 20.0% |
| !! | TCATTAGTGTTATAAGTTAT+AGG | + | chr6.2:44134010-44134029 | MS.gene95827:intron | 20.0% |
| !! | TGTGTAATGATTGTAATTTA+AGG | + | chr6.2:44134645-44134664 | MS.gene95827:intron | 20.0% |
| !! | TTGAAAATTTGCATATGTAA+TGG | - | chr6.2:44131201-44131220 | None:intergenic | 20.0% |
| !! | TTGAAAGTCTTAAATAGAAA+TGG | - | chr6.2:44132438-44132457 | None:intergenic | 20.0% |
| !!! | AAAACTGTTTTCATTATTTC+TGG | - | chr6.2:44133134-44133153 | None:intergenic | 20.0% |
| !!! | AATGATATGGTATAGATTTT+TGG | + | chr6.2:44130666-44130685 | MS.gene95827:intron | 20.0% |
| !!! | GTATATTTAAAATGACGATA+TGG | - | chr6.2:44132262-44132281 | None:intergenic | 20.0% |
| !!! | TATACTTATTTTGATGAACT+AGG | + | chr6.2:44132705-44132724 | MS.gene95827:intron | 20.0% |
| !!! | TCTTCTACATTTTCAAAATT+TGG | - | chr6.2:44133674-44133693 | None:intergenic | 20.0% |
| !!! | TTTGACATTTTCATTGTTTA+TGG | + | chr6.2:44133154-44133173 | MS.gene95827:intron | 20.0% |
| ! | AAACAATGTGGTTATAAGTT+GGG | - | chr6.2:44131614-44131633 | None:intergenic | 25.0% |
| ! | AAATTGTAGAAATAACAGTG+AGG | + | chr6.2:44134806-44134825 | MS.gene95827:CDS | 25.0% |
| ! | AACAAGAACATGTAACATAA+TGG | - | chr6.2:44133451-44133470 | None:intergenic | 25.0% |
| ! | AATATACAGTTACAAATGTG+GGG | + | chr6.2:44132275-44132294 | MS.gene95827:intron | 25.0% |
| ! | AGCAGAAAGATATTGAAAAA+CGG | + | chr6.2:44133767-44133786 | MS.gene95827:intron | 25.0% |
| ! | AGTAGAATTCGGTTATAATT+TGG | + | chr6.2:44131309-44131328 | MS.gene95827:intron | 25.0% |
| ! | ATTACAATCATTACACACTT+TGG | - | chr6.2:44134642-44134661 | None:intergenic | 25.0% |
| ! | ATTAGGGTTTAGTACTATAT+TGG | + | chr6.2:44130738-44130757 | MS.gene95827:intron | 25.0% |
| ! | CAAAATGAAACGTAAAAACT+TGG | + | chr6.2:44134671-44134690 | MS.gene95827:intron | 25.0% |
| ! | CAACTAAAATGTAGTTAGTT+AGG | + | chr6.2:44130602-44130621 | MS.gene95827:intron | 25.0% |
| ! | CTTCAAGAATAACTTAATGT+AGG | + | chr6.2:44132954-44132973 | MS.gene95827:intron | 25.0% |
| ! | GAAACCTAAAAATGACTTAA+GGG | - | chr6.2:44134479-44134498 | None:intergenic | 25.0% |
| ! | GAGTACAATATCAGATATTA+GGG | + | chr6.2:44130722-44130741 | MS.gene95827:intron | 25.0% |
| ! | GCGAATGTGTTTATAAATTA+GGG | - | chr6.2:44131381-44131400 | None:intergenic | 25.0% |
| ! | GTAGAATTCGGTTATAATTT+GGG | + | chr6.2:44131310-44131329 | MS.gene95827:intron | 25.0% |
| ! | TAACACTAATGAATTGTTCA+TGG | - | chr6.2:44134002-44134021 | None:intergenic | 25.0% |
| ! | TAATGGTTTATGCAATGATA+TGG | + | chr6.2:44130653-44130672 | MS.gene95827:intron | 25.0% |
| ! | TATAAATTACCAATGATTCG+AGG | + | chr6.2:44131250-44131269 | MS.gene95827:intron | 25.0% |
| ! | TCAGATATAAACCATTCTTA+GGG | + | chr6.2:44132983-44133002 | MS.gene95827:intron | 25.0% |
| ! | TCTGACATTTGATGAAAATA+TGG | - | chr6.2:44131407-44131426 | None:intergenic | 25.0% |
| ! | TGAAACCTAAAAATGACTTA+AGG | - | chr6.2:44134480-44134499 | None:intergenic | 25.0% |
| ! | TGAGTACAATATCAGATATT+AGG | + | chr6.2:44130721-44130740 | MS.gene95827:intron | 25.0% |
| ! | TGCAACATACCAAATAAATA+AGG | - | chr6.2:44132097-44132116 | None:intergenic | 25.0% |
| ! | TGCGAATGTGTTTATAAATT+AGG | - | chr6.2:44131382-44131401 | None:intergenic | 25.0% |
| ! | TTATAGGACAGAAATATTGA+AGG | - | chr6.2:44133481-44133500 | None:intergenic | 25.0% |
| ! | TTCACAAACAAAACCAAATT+GGG | + | chr6.2:44134300-44134319 | MS.gene95827:CDS | 25.0% |
| ! | TTCATTAAAGATATATCGGA+TGG | - | chr6.2:44132177-44132196 | None:intergenic | 25.0% |
| ! | TTGATCAAATAGATACCTTT+AGG | - | chr6.2:44134138-44134157 | None:intergenic | 25.0% |
| ! | TTGTAGACATTATTATGATG+AGG | + | chr6.2:44134040-44134059 | MS.gene95827:intron | 25.0% |
| ! | TTTAGGCTAAATTAAACCTT+TGG | + | chr6.2:44134452-44134471 | MS.gene95827:intron | 25.0% |
| ! | TTTCACAAACAAAACCAAAT+TGG | + | chr6.2:44134299-44134318 | MS.gene95827:CDS | 25.0% |
| ! | TTTGGAAGAACTTATGAATA+AGG | - | chr6.2:44131800-44131819 | None:intergenic | 25.0% |
| ! | TTTGGATTGTCTTGATATAA+TGG | + | chr6.2:44130636-44130655 | MS.gene95827:intron | 25.0% |
| !! | ATTAGTTTAATGGACATTCA+AGG | + | chr6.2:44132215-44132234 | MS.gene95827:intron | 25.0% |
| !! | CAAGTTTTTACGTTTCATTT+TGG | - | chr6.2:44134673-44134692 | None:intergenic | 25.0% |
| !! | GATTCTGGATAAACATTTTT+GGG | + | chr6.2:44131508-44131527 | MS.gene95827:intron | 25.0% |
| !! | GTCAGTGTAAATTAGTTTAA+TGG | + | chr6.2:44132205-44132224 | MS.gene95827:intron | 25.0% |
| !! | GTTTGCATTGTGAAAATTTT+CGG | + | chr6.2:44132774-44132793 | MS.gene95827:intron | 25.0% |
| !! | TAATTTAGGATATCTTGTTC+TGG | + | chr6.2:44134722-44134741 | MS.gene95827:intron | 25.0% |
| !! | TATGTTTTCACAAAGTAAAC+AGG | + | chr6.2:44133267-44133286 | MS.gene95827:intron | 25.0% |
| !! | TATTAGCTTATTCTTTGTGT+AGG | + | chr6.2:44132843-44132862 | MS.gene95827:intron | 25.0% |
| !! | TGATTCTGGATAAACATTTT+TGG | + | chr6.2:44131507-44131526 | MS.gene95827:intron | 25.0% |
| !! | TTAGTTTAATGGACATTCAA+GGG | + | chr6.2:44132216-44132235 | MS.gene95827:intron | 25.0% |
| !!! | CTAACTAACTACATTTTAGT+TGG | - | chr6.2:44130604-44130623 | None:intergenic | 25.0% |
| !!! | GTTATTTTTAGGTTTCACTT+TGG | - | chr6.2:44134698-44134717 | None:intergenic | 25.0% |
| !!! | TGAGTTTTTTTTGCAATTCT+TGG | + | chr6.2:44132482-44132501 | MS.gene95827:intron | 25.0% |
| AAAACTAAATCTACGCCAAA+TGG | - | chr6.2:44130540-44130559 | None:intergenic | 30.0% | |
| AAAGAAAGAGGAAACTTCAT+TGG | + | chr6.2:44132655-44132674 | MS.gene95827:CDS | 30.0% | |
| AACAAGTAATTGCAACATGT+TGG | - | chr6.2:44133959-44133978 | None:intergenic | 30.0% | |
| AATGTTTATCCAGAATCAGT+TGG | - | chr6.2:44131505-44131524 | None:intergenic | 30.0% | |
| ACAACGTTTCACAAAGTAAA+CGG | - | chr6.2:44133010-44133029 | None:intergenic | 30.0% | |
| ACATTTACTTGCAAAACACT+TGG | - | chr6.2:44133529-44133548 | None:intergenic | 30.0% | |
| ACTTCAAGAAAACTTACTGT+AGG | + | chr6.2:44132868-44132887 | MS.gene95827:intron | 30.0% | |
| AGAATCAACTAGCTGTAAAA+AGG | - | chr6.2:44131975-44131994 | None:intergenic | 30.0% | |
| AGATCTAGGTATTAGAAACT+TGG | + | chr6.2:44131534-44131553 | MS.gene95827:intron | 30.0% | |
| ATATGGCATGGAAAAATGAA+GGG | - | chr6.2:44132245-44132264 | None:intergenic | 30.0% | |
| ATGTTTATCCAGAATCAGTT+GGG | - | chr6.2:44131504-44131523 | None:intergenic | 30.0% | |
| ATTATGGGCTTGAAAAAGAT+AGG | + | chr6.2:44134262-44134281 | MS.gene95827:CDS | 30.0% | |
| ATTTACATAGCTCTCAATGA+TGG | - | chr6.2:44131758-44131777 | None:intergenic | 30.0% | |
| CAAACAATGTGGTTATAAGT+TGG | - | chr6.2:44131615-44131634 | None:intergenic | 30.0% | |
| CAACTTATAACCACATTGTT+TGG | + | chr6.2:44131613-44131632 | MS.gene95827:intron | 30.0% | |
| CAAGAAAAATCATCTGGAAA+TGG | + | chr6.2:44132623-44132642 | MS.gene95827:CDS | 30.0% | |
| CAGAAAATTATGGCCAAATA+TGG | - | chr6.2:44133866-44133885 | None:intergenic | 30.0% | |
| CTAAAATGTAGTTAGTTAGG+TGG | + | chr6.2:44130605-44130624 | MS.gene95827:intron | 30.0% | |
| CTATGCAACAACTACTATTA+AGG | - | chr6.2:44131893-44131912 | None:intergenic | 30.0% | |
| GAATCAACTAGCTGTAAAAA+GGG | - | chr6.2:44131974-44131993 | None:intergenic | 30.0% | |
| GATCTAGGTATTAGAAACTT+GGG | + | chr6.2:44131535-44131554 | MS.gene95827:intron | 30.0% | |
| GCAACTACTCATATATTTGT+AGG | + | chr6.2:44133707-44133726 | MS.gene95827:intron | 30.0% | |
| GGCAAAATGATGAATCTATA+AGG | + | chr6.2:44131028-44131047 | MS.gene95827:intron | 30.0% | |
| GGTTGATTGTTCATATAAGT+AGG | + | chr6.2:44131049-44131068 | MS.gene95827:intron | 30.0% | |
| GTCAGATATAAACCATTCTT+AGG | + | chr6.2:44132982-44133001 | MS.gene95827:intron | 30.0% | |
| GTCCAACATTGGATAAAATA+TGG | - | chr6.2:44131639-44131658 | None:intergenic | 30.0% | |
| TAAAATATGGCCAAACAATG+TGG | - | chr6.2:44131626-44131645 | None:intergenic | 30.0% | |
| TAATGAATTGTTCATGGTCA+AGG | - | chr6.2:44133996-44134015 | None:intergenic | 30.0% | |
| TAATTAGTGTCCAAAGTTCA+GGG | - | chr6.2:44133636-44133655 | None:intergenic | 30.0% | |
| TATGGTTGATTGAGTGTTAT+AGG | - | chr6.2:44133497-44133516 | None:intergenic | 30.0% | |
| TCATAAGTTCTTCCAAATTG+TGG | + | chr6.2:44131803-44131822 | MS.gene95827:intron | 30.0% | |
| TGATGAAGTGAATGATGTAA+AGG | - | chr6.2:44132368-44132387 | None:intergenic | 30.0% | |
| ! | AAATTGCCAGGCTTTAATAT+GGG | + | chr6.2:44133598-44133617 | MS.gene95827:intron | 30.0% |
| ! | ATTTGACCGACTTACAAAAT+TGG | + | chr6.2:44131337-44131356 | MS.gene95827:intron | 30.0% |
| ! | CAAAAGCCAATTTTGTAAGT+CGG | - | chr6.2:44131346-44131365 | None:intergenic | 30.0% |
| ! | GTGTGACTACCTTATTTATT+TGG | + | chr6.2:44132085-44132104 | MS.gene95827:CDS | 30.0% |
| ! | TATAGTGATAATGATGTCCA+GGG | - | chr6.2:44133935-44133954 | None:intergenic | 30.0% |
| ! | TGTTCATTGTTTTCACTGAT+GGG | + | chr6.2:44132809-44132828 | MS.gene95827:intron | 30.0% |
| ! | TTAAGTTGTTTATCCAAGCA+TGG | - | chr6.2:44131276-44131295 | None:intergenic | 30.0% |
| ! | TTGTTCATTGTTTTCACTGA+TGG | + | chr6.2:44132808-44132827 | MS.gene95827:intron | 30.0% |
| ! | TTTAAAATGACGATATGGCA+TGG | - | chr6.2:44132257-44132276 | None:intergenic | 30.0% |
| ! | TTTAGGATGATATTGTCAAG+AGG | + | chr6.2:44134079-44134098 | MS.gene95827:intron | 30.0% |
| ! | TTTGAAGTGAATCATTGTGA+TGG | + | chr6.2:44133075-44133094 | MS.gene95827:intron | 30.0% |
| ! | TTTGTACAAAGGCTTTTTGT+CGG | + | chr6.2:44132055-44132074 | MS.gene95827:CDS | 30.0% |
| !! | TTTTACTTGTTAACAAGCAC+AGG | - | chr6.2:44133215-44133234 | None:intergenic | 30.0% |
| !!! | GCTTTTAGAATTTGTATCAC+AGG | - | chr6.2:44134177-44134196 | None:intergenic | 30.0% |
| !!! | TTACTCTATTGTTTTTGCCA+AGG | + | chr6.2:44132598-44132617 | MS.gene95827:intron | 30.0% |
| AAAACCAAATTGGGATCAAC+CGG | + | chr6.2:44134309-44134328 | MS.gene95827:CDS | 35.0% | |
| AAAATGACTTAAGGGACCAA+AGG | - | chr6.2:44134471-44134490 | None:intergenic | 35.0% | |
| AAATGTAGTTAGTTAGGTGG+TGG | + | chr6.2:44130608-44130627 | MS.gene95827:intron | 35.0% | |
| AACACTTGGCTTACAAGTTA+TGG | - | chr6.2:44133515-44133534 | None:intergenic | 35.0% | |
| AAGAACAAGCTAAACCTATG+AGG | - | chr6.2:44133306-44133325 | None:intergenic | 35.0% | |
| AAGGCACAAGAAAAATCATC+TGG | + | chr6.2:44132617-44132636 | MS.gene95827:intron | 35.0% | |
| ACATCATTCACTTCATCACT+TGG | + | chr6.2:44132370-44132389 | MS.gene95827:intron | 35.0% | |
| ACTTGTAAAAGCAAATTGCC+AGG | + | chr6.2:44133586-44133605 | MS.gene95827:intron | 35.0% | |
| AGAGGAAACTTCATTGGATA+TGG | + | chr6.2:44132661-44132680 | MS.gene95827:CDS | 35.0% | |
| AGGTATTAGAAACTTGGGTT+GGG | + | chr6.2:44131540-44131559 | MS.gene95827:intron | 35.0% | |
| AGTGGCCTACATTAAGTAAA+TGG | - | chr6.2:44132924-44132943 | None:intergenic | 35.0% | |
| AGTTCGTCAAATGTTTCCTA+TGG | - | chr6.2:44134594-44134613 | None:intergenic | 35.0% | |
| ATCAATAACTATTGACCGCT+TGG | - | chr6.2:44133420-44133439 | None:intergenic | 35.0% | |
| CACAGCAAGTACATGTAAAA+TGG | - | chr6.2:44130703-44130722 | None:intergenic | 35.0% | |
| CATTCAGAAATCTGTCACAT+TGG | - | chr6.2:44132894-44132913 | None:intergenic | 35.0% | |
| CTGAAGGGACTAAAATGAAA+CGG | - | chr6.2:44134527-44134546 | None:intergenic | 35.0% | |
| CTGATTACTATGGTACTTGT+CGG | + | chr6.2:44135096-44135115 | MS.gene95827:CDS | 35.0% | |
| CTTTACAGGTCATGCATTAT+GGG | + | chr6.2:44134247-44134266 | MS.gene95827:CDS | 35.0% | |
| GAAAAATCATCTGGAAATGG+TGG | + | chr6.2:44132626-44132645 | MS.gene95827:CDS | 35.0% | |
| GAACTAGGCACTAGTAAATT+AGG | + | chr6.2:44132720-44132739 | MS.gene95827:intron | 35.0% | |
| GAATGGTTTATATCTGACAG+TGG | - | chr6.2:44132980-44132999 | None:intergenic | 35.0% | |
| GACCGTTAATATATTCCCAA+GGG | - | chr6.2:44130977-44130996 | None:intergenic | 35.0% | |
| GAGGATTGAAGAAAGACTTT+CGG | + | chr6.2:44134098-44134117 | MS.gene95827:CDS | 35.0% | |
| GATATGGCATGGAAAAATGA+AGG | - | chr6.2:44132246-44132265 | None:intergenic | 35.0% | |
| GTAATTAGTGTCCAAAGTTC+AGG | - | chr6.2:44133637-44133656 | None:intergenic | 35.0% | |
| TAGGTATTAGAAACTTGGGT+TGG | + | chr6.2:44131539-44131558 | MS.gene95827:intron | 35.0% | |
| TATAAGGCTGAGTAAGAGTT+AGG | - | chr6.2:44131566-44131585 | None:intergenic | 35.0% | |
| TCTTGAAGTTATTCTGACAG+TGG | - | chr6.2:44132942-44132961 | None:intergenic | 35.0% | |
| TCTTGTCAGGAGATGTATTT+AGG | - | chr6.2:44134878-44134897 | None:intergenic | 35.0% | |
| TGGTATTTATAGCCCTTTGT+GGG | + | chr6.2:44130787-44130806 | MS.gene95827:intron | 35.0% | |
| TTCTATACAAGATCGATCAG+TGG | + | chr6.2:44134957-44134976 | MS.gene95827:CDS | 35.0% | |
| TTGAAGAAAGACTTTCGGTT+TGG | + | chr6.2:44134103-44134122 | MS.gene95827:CDS | 35.0% | |
| TTTGTATCACAGGCAAATAC+TGG | - | chr6.2:44134167-44134186 | None:intergenic | 35.0% | |
| ! | AGATGATTTTTCTTGTGCCT+TGG | - | chr6.2:44132618-44132637 | None:intergenic | 35.0% |
| ! | ATAGTGATAATGATGTCCAG+GGG | - | chr6.2:44133934-44133953 | None:intergenic | 35.0% |
| ! | CAAATTGCCAGGCTTTAATA+TGG | + | chr6.2:44133597-44133616 | MS.gene95827:intron | 35.0% |
| ! | CATTTTTCATTCGAGTCCAT+AGG | + | chr6.2:44134575-44134594 | MS.gene95827:intron | 35.0% |
| ! | CTATAGTGATAATGATGTCC+AGG | - | chr6.2:44133936-44133955 | None:intergenic | 35.0% |
| ! | GGCCATATTTTATCCAATGT+TGG | + | chr6.2:44131634-44131653 | MS.gene95827:intron | 35.0% |
| ! | GTTCTACACTGTTCTGTTTT+AGG | + | chr6.2:44134062-44134081 | MS.gene95827:intron | 35.0% |
| ! | GTTTGGACTTTTCTTCCTAA+AGG | + | chr6.2:44134120-44134139 | MS.gene95827:CDS | 35.0% |
| ! | TGTAGGGTCTTTTTGTACAA+AGG | + | chr6.2:44132044-44132063 | MS.gene95827:intron | 35.0% |
| !! | ACATGTACTGATTGTGTCTT+AGG | + | chr6.2:44133356-44133375 | MS.gene95827:intron | 35.0% |
| !! | ACCTCAAAGTCGGTTTTATA+AGG | - | chr6.2:44131582-44131601 | None:intergenic | 35.0% |
| !! | AGGTTGACTTGGTTCTTAAT+TGG | + | chr6.2:44133376-44133395 | MS.gene95827:intron | 35.0% |
| !! | TTCTTGTTCCTTTTGCTGTA+GGG | + | chr6.2:44132028-44132047 | MS.gene95827:intron | 35.0% |
| !! | TTTCTTGTTCCTTTTGCTGT+AGG | + | chr6.2:44132027-44132046 | MS.gene95827:intron | 35.0% |
| !!! | ACATTTTTGGGTTGAGATCT+AGG | + | chr6.2:44131520-44131539 | MS.gene95827:intron | 35.0% |
| !!! | TGGTCCCTTAAGTCATTTTT+AGG | + | chr6.2:44134472-44134491 | MS.gene95827:intron | 35.0% |
| AAGATGATAGTTGTCCAGCT+TGG | + | chr6.2:44135024-44135043 | MS.gene95827:CDS | 40.0% | |
| AAGTAAACGGACCCTAAGAA+TGG | - | chr6.2:44132997-44133016 | None:intergenic | 40.0% | |
| AAGTGCTAAGAGTCCAACAT+TGG | - | chr6.2:44131650-44131669 | None:intergenic | 40.0% | |
| AGAACTGCATTCCCTTTAAC+TGG | - | chr6.2:44134840-44134859 | None:intergenic | 40.0% | |
| AGAATCACTGTTGCCATCAA+AGG | - | chr6.2:44134336-44134355 | None:intergenic | 40.0% | |
| AGATGATAGTTGTCCAGCTT+GGG | + | chr6.2:44135025-44135044 | MS.gene95827:CDS | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | - | chr6.2:44130783-44130802 | None:intergenic | 40.0% | |
| AGGTTCTCCAACCAGTTAAA+GGG | + | chr6.2:44134826-44134845 | MS.gene95827:CDS | 40.0% | |
| ATACAAGATCGATCAGTGGA+GGG | + | chr6.2:44134961-44134980 | MS.gene95827:CDS | 40.0% | |
| ATCTCTCGAATGCTACTCAA+GGG | + | chr6.2:44134358-44134377 | MS.gene95827:CDS | 40.0% | |
| ATGGGCTTGAAAAAGATAGG+CGG | + | chr6.2:44134265-44134284 | MS.gene95827:CDS | 40.0% | |
| CAAAAAGACCCTACAGCAAA+AGG | - | chr6.2:44132039-44132058 | None:intergenic | 40.0% | |
| CACTCTTGGAATCATTCTCA+AGG | - | chr6.2:44130769-44130788 | None:intergenic | 40.0% | |
| CCATAATGCATGACCTGTAA+AGG | - | chr6.2:44134249-44134268 | None:intergenic | 40.0% | |
| CCTTTACAGGTCATGCATTA+TGG | + | chr6.2:44134246-44134265 | MS.gene95827:CDS | 40.0% | |
| CGACAAGTACCATAGTAATC+AGG | - | chr6.2:44135098-44135117 | None:intergenic | 40.0% | |
| CTTGAGAATGATTCCAAGAG+TGG | + | chr6.2:44130767-44130786 | MS.gene95827:intron | 40.0% | |
| GAAAACCTTCACCTCAAAGT+CGG | - | chr6.2:44131592-44131611 | None:intergenic | 40.0% | |
| GGACCGTTAATATATTCCCA+AGG | - | chr6.2:44130978-44130997 | None:intergenic | 40.0% | |
| GGCCCTTGGGAATATATTAA+CGG | + | chr6.2:44130972-44130991 | MS.gene95827:intron | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | + | chr6.2:44130786-44130805 | MS.gene95827:intron | 40.0% | |
| GTTGGATCTCCTGATTACTA+TGG | + | chr6.2:44135086-44135105 | MS.gene95827:CDS | 40.0% | |
| TATACAAGATCGATCAGTGG+AGG | + | chr6.2:44134960-44134979 | MS.gene95827:CDS | 40.0% | |
| TATTGACCGCTTGGTAGAAA+AGG | - | chr6.2:44133411-44133430 | None:intergenic | 40.0% | |
| TCATTGCTGCAACCACAATT+TGG | - | chr6.2:44131818-44131837 | None:intergenic | 40.0% | |
| TGGGAAAAAACCCTGAACTT+TGG | + | chr6.2:44133623-44133642 | MS.gene95827:intron | 40.0% | |
| TGGTGGCTATTCAAAGAAAG+AGG | + | chr6.2:44132643-44132662 | MS.gene95827:CDS | 40.0% | |
| TTGGTATGTTGCAGTCTCAT+TGG | + | chr6.2:44132104-44132123 | MS.gene95827:intron | 40.0% | |
| ! | ACATATCGCCTTTAAGGACA+GGG | - | chr6.2:44134920-44134939 | None:intergenic | 40.0% |
| ! | AGTTAGGTGGTGGTTAACTT+TGG | + | chr6.2:44130618-44130637 | MS.gene95827:intron | 40.0% |
| ! | ATGCTTCTAGAAGCTGACTA+AGG | + | chr6.2:44130873-44130892 | MS.gene95827:intron | 40.0% |
| ! | ATGTTGCAGTCTCATTGGTT+TGG | + | chr6.2:44132109-44132128 | MS.gene95827:intron | 40.0% |
| ! | CAAAGGCTTTTTGTCGGATA+AGG | + | chr6.2:44132061-44132080 | MS.gene95827:CDS | 40.0% |
| ! | CCAGGCTTTAATATGGGATT+GGG | + | chr6.2:44133604-44133623 | MS.gene95827:intron | 40.0% |
| ! | GCCTTATAAAACCGACTTTG+AGG | + | chr6.2:44131578-44131597 | MS.gene95827:intron | 40.0% |
| ! | GCTTCGTGATTCTTGATAGT+GGG | + | chr6.2:44131846-44131865 | MS.gene95827:intron | 40.0% |
| !! | CTTCGTGATTCTTGATAGTG+GGG | + | chr6.2:44131847-44131866 | MS.gene95827:intron | 40.0% |
| !! | GATTGTGTCTTAGGTTGACT+TGG | + | chr6.2:44133365-44133384 | MS.gene95827:intron | 40.0% |
| !! | TAAAACCGACTTTGAGGTGA+AGG | + | chr6.2:44131584-44131603 | MS.gene95827:intron | 40.0% |
| !! | TTCTAGAAGCATCTAGAAGC+AGG | - | chr6.2:44130865-44130884 | None:intergenic | 40.0% |
| AACCCTCTTTCCTGAATCAG+TGG | + | chr6.2:44134386-44134405 | MS.gene95827:CDS | 45.0% | |
| ACTTAAGCTCCAAGCAAGCT+GGG | + | chr6.2:44130824-44130843 | MS.gene95827:intron | 45.0% | |
| AGAGAACAGCAAGCCTTTAC+AGG | + | chr6.2:44134233-44134252 | MS.gene95827:intron | 45.0% | |
| ATCACAGGCAAATACTGGTG+TGG | - | chr6.2:44134162-44134181 | None:intergenic | 45.0% | |
| ATTTATAGCCCTTTGTGGGC+TGG | + | chr6.2:44130791-44130810 | MS.gene95827:intron | 45.0% | |
| ATTTGACCAGCTGCTACTCT+TGG | - | chr6.2:44134790-44134809 | None:intergenic | 45.0% | |
| CAAGAATCACGAAGCGATTG+TGG | - | chr6.2:44131841-44131860 | None:intergenic | 45.0% | |
| CAGACCACATATCGCCTTTA+AGG | - | chr6.2:44134926-44134945 | None:intergenic | 45.0% | |
| CATCTCTCGAATGCTACTCA+AGG | + | chr6.2:44134357-44134376 | MS.gene95827:CDS | 45.0% | |
| CCCAATCCCATATTAAAGCC+TGG | - | chr6.2:44133607-44133626 | None:intergenic | 45.0% | |
| CGCTTCGTGATTCTTGATAG+TGG | + | chr6.2:44131845-44131864 | MS.gene95827:intron | 45.0% | |
| CTGCATTCCCTTTAACTGGT+TGG | - | chr6.2:44134836-44134855 | None:intergenic | 45.0% | |
| CTGTCCTTAAAGGCGATATG+TGG | + | chr6.2:44134919-44134938 | MS.gene95827:CDS | 45.0% | |
| GAGATCCAACCATGTAGACA+GGG | - | chr6.2:44135076-44135095 | None:intergenic | 45.0% | |
| GAGGTTCTCCAACCAGTTAA+AGG | + | chr6.2:44134825-44134844 | MS.gene95827:CDS | 45.0% | |
| GCTCTTACGTTTCACCTCAT+AGG | + | chr6.2:44133289-44133308 | MS.gene95827:intron | 45.0% | |
| GGGGTGATGTGGCAAAATAA+AGG | + | chr6.2:44132294-44132313 | MS.gene95827:intron | 45.0% | |
| GTGGTTGCATCAGCCATATT+TGG | + | chr6.2:44133850-44133869 | MS.gene95827:intron | 45.0% | |
| GTTACAAATGTGGGGTGATG+TGG | + | chr6.2:44132283-44132302 | MS.gene95827:intron | 45.0% | |
| TCCTGAATCAGTGGTGAGTA+CGG | + | chr6.2:44134395-44134414 | MS.gene95827:intron | 45.0% | |
| TCTCTCGAATGCTACTCAAG+GGG | + | chr6.2:44134359-44134378 | MS.gene95827:CDS | 45.0% | |
| TGGACCATCTGCATTCCTAA+AGG | - | chr6.2:44131181-44131200 | None:intergenic | 45.0% | |
| ! | CACATATCGCCTTTAAGGAC+AGG | - | chr6.2:44134921-44134940 | None:intergenic | 45.0% |
| ! | CTTCTAGAAGCTGACTAAGG+CGG | + | chr6.2:44130876-44130895 | MS.gene95827:intron | 45.0% |
| ! | GCCAGGCTTTAATATGGGAT+TGG | + | chr6.2:44133603-44133622 | MS.gene95827:intron | 45.0% |
| ! | GTGCTTTCAGATGCTTGCTA+GGG | + | chr6.2:44131096-44131115 | MS.gene95827:intron | 45.0% |
| ! | TGCTTTCAGATGCTTGCTAG+GGG | + | chr6.2:44131097-44131116 | MS.gene95827:intron | 45.0% |
| ! | TGTGCCTTTAGGAATGCAGA+TGG | + | chr6.2:44131174-44131193 | MS.gene95827:intron | 45.0% |
| !! | CACCACTGATTCAGGAAAGA+GGG | - | chr6.2:44134391-44134410 | None:intergenic | 45.0% |
| !! | TCACCACTGATTCAGGAAAG+AGG | - | chr6.2:44134392-44134411 | None:intergenic | 45.0% |
| !!! | GAGGTTTTAAACTGTGGTCG+CGG | - | chr6.2:44133912-44133931 | None:intergenic | 45.0% |
| AAGGCACAGATGCCTCAAGA+AGG | - | chr6.2:44131162-44131181 | None:intergenic | 50.0% | |
| ACGGTCTGCAATCGCAATTG+TGG | + | chr6.2:44133786-44133805 | MS.gene95827:intron | 50.0% | |
| AGGGAAAGTCTCAACTACGC+TGG | + | chr6.2:44134980-44134999 | MS.gene95827:CDS | 50.0% | |
| AGGTCCGGTTGATCCCAATT+TGG | - | chr6.2:44134316-44134335 | None:intergenic | 50.0% | |
| CAACCACACTGACACAGTCA+CGG | - | chr6.2:44133837-44133856 | None:intergenic | 50.0% | |
| CAAGCATGGCCTCGAATCAT+TGG | - | chr6.2:44131262-44131281 | None:intergenic | 50.0% | |
| CAATGATTCGAGGCCATGCT+TGG | + | chr6.2:44131260-44131279 | MS.gene95827:intron | 50.0% | |
| CACTGTTGCCATCAAAGGTC+CGG | - | chr6.2:44134331-44134350 | None:intergenic | 50.0% | |
| CAGAATGGCTCCAAAGGACT+AGG | - | chr6.2:44130920-44130939 | None:intergenic | 50.0% | |
| CAGCAACGGGAGAATGTCAA+CGG | + | chr6.2:44135048-44135067 | MS.gene95827:CDS | 50.0% | |
| CGTGCTTTCAGATGCTTGCT+AGG | + | chr6.2:44131095-44131114 | MS.gene95827:intron | 50.0% | |
| CTCTCGAATGCTACTCAAGG+GGG | + | chr6.2:44134360-44134379 | MS.gene95827:CDS | 50.0% | |
| GACTTAAGCTCCAAGCAAGC+TGG | + | chr6.2:44130823-44130842 | MS.gene95827:intron | 50.0% | |
| GCGTGTAAGCTACTCTTGTC+AGG | - | chr6.2:44134891-44134910 | None:intergenic | 50.0% | |
| GGAGATCCAACCATGTAGAC+AGG | - | chr6.2:44135077-44135096 | None:intergenic | 50.0% | |
| TAAGCACGAGTCTTGGGACA+AGG | + | chr6.2:44131007-44131026 | MS.gene95827:intron | 50.0% | |
| TCAACGGAACCCTGTCTACA+TGG | + | chr6.2:44135064-44135083 | MS.gene95827:CDS | 50.0% | |
| TGCAATCGCAATTGTGGCTG+CGG | + | chr6.2:44133792-44133811 | MS.gene95827:intron | 50.0% | |
| TGTAGGTCCTAACCTGCTCT+CGG | + | chr6.2:44133724-44133743 | MS.gene95827:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | - | chr6.2:44131007-44131026 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | - | chr6.2:44131008-44131027 | None:intergenic | 50.0% | |
| TTTAAACTGTGGTCGCGGTC+CGG | - | chr6.2:44133907-44133926 | None:intergenic | 50.0% | |
| TTTCCGTGACTGTGTCAGTG+TGG | + | chr6.2:44133831-44133850 | MS.gene95827:intron | 50.0% | |
| ! | CCACAGTTTAAAACCTCCCC+TGG | + | chr6.2:44133915-44133934 | MS.gene95827:intron | 50.0% |
| ! | CCAGAGCCTTTTCTACCAAG+CGG | + | chr6.2:44133402-44133421 | MS.gene95827:intron | 50.0% |
| ! | CTTGAGGCATCTGTGCCTTT+AGG | + | chr6.2:44131163-44131182 | MS.gene95827:intron | 50.0% |
| ! | GATCTAAAGCCCAGCTTGCT+TGG | - | chr6.2:44130836-44130855 | None:intergenic | 50.0% |
| ! | GCTTTCAGATGCTTGCTAGG+GGG | + | chr6.2:44131098-44131117 | MS.gene95827:intron | 50.0% |
| ! | GTGATAATGATGTCCAGGGG+AGG | - | chr6.2:44133931-44133950 | None:intergenic | 50.0% |
| !! | CTAGTCCTTTGGAGCCATTC+TGG | + | chr6.2:44130918-44130937 | MS.gene95827:intron | 50.0% |
| !! | TCCTTTGGAGCCATTCTGGA+GGG | + | chr6.2:44130922-44130941 | MS.gene95827:intron | 50.0% |
| !!! | CCAGGGGAGGTTTTAAACTG+TGG | - | chr6.2:44133918-44133937 | None:intergenic | 50.0% |
| AAAGCCCTCCAGAAAGGCTC+AGG | - | chr6.2:44130950-44130969 | None:intergenic | 55.0% | |
| AAGAAGGCTCCCTGAAGCTC+GGG | - | chr6.2:44131146-44131165 | None:intergenic | 55.0% | |
| ACGCTGTAACCAGCCCACAA+AGG | - | chr6.2:44130803-44130822 | None:intergenic | 55.0% | |
| AGCTTCAGGGAGCCTTCTTG+AGG | + | chr6.2:44131147-44131166 | MS.gene95827:intron | 55.0% | |
| CAAGAAGGCTCCCTGAAGCT+CGG | - | chr6.2:44131147-44131166 | None:intergenic | 55.0% | |
| CACAGACCAAGAGTAGCAGC+TGG | + | chr6.2:44134781-44134800 | MS.gene95827:intron | 55.0% | |
| CAGCTGCTACTCTTGGTCTG+TGG | - | chr6.2:44134783-44134802 | None:intergenic | 55.0% | |
| CAGTTGGGCAACCTGCTATC+AGG | - | chr6.2:44131489-44131508 | None:intergenic | 55.0% | |
| CCGCTTGGTAGAAAAGGCTC+TGG | - | chr6.2:44133405-44133424 | None:intergenic | 55.0% | |
| CGCTGTAACCAGCCCACAAA+GGG | - | chr6.2:44130802-44130821 | None:intergenic | 55.0% | |
| CGGAACCCTGTCTACATGGT+TGG | + | chr6.2:44135068-44135087 | MS.gene95827:CDS | 55.0% | |
| GCTCGATGCCCTGTCCTTAA+AGG | + | chr6.2:44134909-44134928 | MS.gene95827:CDS | 55.0% | |
| GGGATCAACCGGACCTTTGA+TGG | + | chr6.2:44134320-44134339 | MS.gene95827:CDS | 55.0% | |
| GTCACCGCTATCAGACCACT+CGG | - | chr6.2:44131467-44131486 | None:intergenic | 55.0% | |
| GTCCCAAGACTCGTGCTTAG+GGG | - | chr6.2:44131006-44131025 | None:intergenic | 55.0% | |
| TCACCGCTATCAGACCACTC+GGG | - | chr6.2:44131466-44131485 | None:intergenic | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | - | chr6.2:44131005-44131024 | None:intergenic | 55.0% | |
| TTGTCCAGCTTGGGCAGCAA+CGG | + | chr6.2:44135034-44135053 | MS.gene95827:CDS | 55.0% | |
| ! | AGCCTTTCTGGAGGGCTTTC+AGG | + | chr6.2:44130951-44130970 | MS.gene95827:intron | 55.0% |
| ! | GATAGCGGTGACCTGATAGC+AGG | + | chr6.2:44131475-44131494 | MS.gene95827:intron | 55.0% |
| ! | GCAGGTTGCCCAACTGATTC+TGG | + | chr6.2:44131493-44131512 | MS.gene95827:intron | 55.0% |
| ! | TTCAGATGCTTGCTAGGGGG+CGG | + | chr6.2:44131101-44131120 | MS.gene95827:intron | 55.0% |
| !! | GCCGTACTCACCACTGATTC+AGG | - | chr6.2:44134399-44134418 | None:intergenic | 55.0% |
| !! | GTCCTTTGGAGCCATTCTGG+AGG | + | chr6.2:44130921-44130940 | MS.gene95827:intron | 55.0% |
| ACTCGGGCCATGCTCCAGAT+GGG | - | chr6.2:44131450-44131469 | None:intergenic | 60.0% | |
| AGCAGAGCCGAGAGCAGGTT+AGG | - | chr6.2:44133734-44133753 | None:intergenic | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | + | chr6.2:44131000-44131019 | MS.gene95827:intron | 60.0% | |
| AGGGACACACCCGAGCTTCA+GGG | + | chr6.2:44131134-44131153 | MS.gene95827:intron | 60.0% | |
| ATGCTCCAGATGGGCGTGAG+GGG | - | chr6.2:44131441-44131460 | None:intergenic | 60.0% | |
| CAAACAGCAGAGCCGAGAGC+AGG | - | chr6.2:44133739-44133758 | None:intergenic | 60.0% | |
| CATGCTCCAGATGGGCGTGA+GGG | - | chr6.2:44131442-44131461 | None:intergenic | 60.0% | |
| GCCCCCTAAGCACGAGTCTT+GGG | + | chr6.2:44131001-44131020 | MS.gene95827:intron | 60.0% | |
| GCCCTCCAGAATGGCTCCAA+AGG | - | chr6.2:44130926-44130945 | None:intergenic | 60.0% | |
| GGCCTGAAAGCCCTCCAGAA+AGG | - | chr6.2:44130956-44130975 | None:intergenic | 60.0% | |
| TGGAGGGCTTTCAGGCCCTT+GGG | + | chr6.2:44130959-44130978 | MS.gene95827:intron | 60.0% | |
| TGGCCCGAGTGGTCTGATAG+CGG | + | chr6.2:44131460-44131479 | MS.gene95827:intron | 60.0% | |
| TGTCCAGCTTGGGCAGCAAC+GGG | + | chr6.2:44135035-44135054 | MS.gene95827:CDS | 60.0% | |
| ACTAAGGCGGCGCCTCTGGA+AGG | + | chr6.2:44130889-44130908 | MS.gene95827:intron | 65.0% | |
| CACTCGGGCCATGCTCCAGA+TGG | - | chr6.2:44131451-44131470 | None:intergenic | 65.0% | |
| CCATGCTCCAGATGGGCGTG+AGG | - | chr6.2:44131443-44131462 | None:intergenic | 65.0% | |
| CTGGAGGGCTTTCAGGCCCT+TGG | + | chr6.2:44130958-44130977 | MS.gene95827:intron | 65.0% | |
| GACTCGTGCTTAGGGGGCTG+TGG | - | chr6.2:44130999-44131018 | None:intergenic | 65.0% | |
| GAGGGACACACCCGAGCTTC+AGG | + | chr6.2:44131133-44131152 | MS.gene95827:intron | 65.0% | |
| GGCGCCTGAGCCTTTCTGGA+GGG | + | chr6.2:44130943-44130962 | MS.gene95827:intron | 65.0% | |
| TACACCCCCTCACGCCCATC+TGG | + | chr6.2:44131433-44131452 | MS.gene95827:intron | 65.0% | |
| TCTCCCGTTGCTGCCCAAGC+TGG | - | chr6.2:44135041-44135060 | None:intergenic | 65.0% | |
| TGCTCCAGATGGGCGTGAGG+GGG | - | chr6.2:44131440-44131459 | None:intergenic | 65.0% | |
| ! | CATCTGGAGCATGGCCCGAG+TGG | + | chr6.2:44131449-44131468 | MS.gene95827:intron | 65.0% |
| ! | CCTCACGCCCATCTGGAGCA+TGG | + | chr6.2:44131440-44131459 | MS.gene95827:intron | 65.0% |
| ! | CTAAGGCGGCGCCTCTGGAA+GGG | + | chr6.2:44130890-44130909 | MS.gene95827:intron | 65.0% |
| ! | GAAGGGCGCGCCTAGTCCTT+TGG | + | chr6.2:44130907-44130926 | MS.gene95827:intron | 65.0% |
| CTCGGGTGTGTCCCTCCGAG+AGG | - | chr6.2:44131129-44131148 | None:intergenic | 70.0% | |
| GACTAGGCGCGCCCTTCCAG+AGG | - | chr6.2:44130904-44130923 | None:intergenic | 70.0% | |
| GCTGACTAAGGCGGCGCCTC+TGG | + | chr6.2:44130885-44130904 | MS.gene95827:intron | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+TGG | - | chr6.2:44130935-44130954 | None:intergenic | 70.0% | |
| GGGCGCCTGAGCCTTTCTGG+AGG | + | chr6.2:44130942-44130961 | MS.gene95827:intron | 70.0% | |
| TGCTAGGGGGCGGTGCCTCT+CGG | + | chr6.2:44131111-44131130 | MS.gene95827:intron | 70.0% | |
| !! | GGAGGGCGCCTGAGCCTTTC+TGG | + | chr6.2:44130939-44130958 | MS.gene95827:intron | 70.0% |
| AGGGGGCGGTGCCTCTCGGA+GGG | + | chr6.2:44131115-44131134 | MS.gene95827:intron | 75.0% | |
| TAGGGGGCGGTGCCTCTCGG+AGG | + | chr6.2:44131114-44131133 | MS.gene95827:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 44130444 | 44135139 | 44130444 | ID=MS.gene95827 |
| chr6.2 | mRNA | 44130444 | 44135139 | 44130444 | ID=MS.gene95827.t1;Parent=MS.gene95827 |
| chr6.2 | exon | 44130444 | 44130451 | 44130444 | ID=MS.gene95827.t1.exon1;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44130444 | 44130451 | 44130444 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| chr6.2 | exon | 44132049 | 44132106 | 44132049 | ID=MS.gene95827.t1.exon2;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44132049 | 44132106 | 44132049 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| chr6.2 | exon | 44132620 | 44132685 | 44132620 | ID=MS.gene95827.t1.exon3;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44132620 | 44132685 | 44132620 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| chr6.2 | exon | 44134084 | 44134141 | 44134084 | ID=MS.gene95827.t1.exon4;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44134084 | 44134141 | 44134084 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| chr6.2 | exon | 44134235 | 44134407 | 44134235 | ID=MS.gene95827.t1.exon5;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44134235 | 44134407 | 44134235 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| chr6.2 | exon | 44134786 | 44135139 | 44134786 | ID=MS.gene95827.t1.exon6;Parent=MS.gene95827.t1 |
| chr6.2 | CDS | 44134786 | 44135139 | 44134786 | ID=cds.MS.gene95827.t1;Parent=MS.gene95827.t1 |
| Gene Sequence |
| Protein sequence |
