Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96347.t1 | XP_003610062.1 | 71.9 | 384 | 54 | 6 | 5 | 337 | 2 | 382 | 2.50E-145 | 525 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96347.t1 | Q9LVD4 | 43.0 | 381 | 159 | 8 | 5 | 334 | 2 | 375 | 2.1e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96347.t1 | G7JUB4 | 71.9 | 384 | 54 | 6 | 5 | 337 | 2 | 382 | 1.8e-145 | 525.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene96347 | 0.82485 | 6.45E-54 | -1.69E-46 |
| MS.gene049915 | MS.gene96347 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene055207 | MS.gene96347 | 0.807407 | 5.13E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene96347 | 0.809202 | 2.13E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene96347 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene96347 | 0.814839 | 1.26E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96347.t1 | MTR_4g127510 | 71.875 | 384 | 54 | 6 | 5 | 337 | 2 | 382 | 0.0 | 528 |
| MS.gene96347.t1 | MTR_2g037770 | 58.530 | 381 | 104 | 6 | 7 | 337 | 6 | 382 | 5.58e-146 | 417 |
| MS.gene96347.t1 | MTR_2g037790 | 53.608 | 388 | 123 | 7 | 1 | 337 | 3 | 384 | 3.99e-133 | 384 |
| MS.gene96347.t1 | MTR_2g037790 | 53.608 | 388 | 123 | 7 | 1 | 337 | 6 | 387 | 5.50e-133 | 384 |
| MS.gene96347.t1 | MTR_4g127490 | 53.003 | 383 | 125 | 7 | 5 | 334 | 11 | 391 | 6.00e-125 | 364 |
| MS.gene96347.t1 | MTR_4g127490 | 53.003 | 383 | 125 | 7 | 5 | 334 | 13 | 393 | 7.39e-125 | 363 |
| MS.gene96347.t1 | MTR_2g037770 | 55.921 | 304 | 80 | 6 | 1 | 254 | 1 | 300 | 1.22e-101 | 302 |
| MS.gene96347.t1 | MTR_2g037770 | 56.376 | 298 | 76 | 6 | 7 | 254 | 6 | 299 | 9.58e-101 | 300 |
| MS.gene96347.t1 | MTR_2g037770 | 55.431 | 267 | 65 | 6 | 7 | 223 | 6 | 268 | 2.19e-86 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96347.t1 | AT5G57240 | 42.820 | 383 | 161 | 8 | 5 | 336 | 2 | 377 | 3.14e-99 | 298 |
| MS.gene96347.t1 | AT5G57240 | 42.820 | 383 | 161 | 8 | 5 | 336 | 2 | 377 | 3.14e-99 | 298 |
| MS.gene96347.t1 | AT5G57240 | 42.820 | 383 | 161 | 8 | 5 | 336 | 2 | 377 | 3.14e-99 | 298 |
| MS.gene96347.t1 | AT4G25850 | 44.094 | 381 | 155 | 8 | 6 | 335 | 8 | 381 | 1.75e-96 | 291 |
| MS.gene96347.t1 | AT4G25850 | 44.094 | 381 | 155 | 8 | 6 | 335 | 110 | 483 | 4.15e-95 | 291 |
| MS.gene96347.t1 | AT5G57240 | 40.196 | 408 | 161 | 9 | 5 | 336 | 2 | 402 | 3.04e-93 | 283 |
| MS.gene96347.t1 | AT5G57240 | 40.196 | 408 | 161 | 9 | 5 | 336 | 2 | 402 | 3.04e-93 | 283 |
| MS.gene96347.t1 | AT4G25860 | 46.687 | 332 | 142 | 6 | 37 | 335 | 47 | 376 | 2.21e-90 | 275 |
| MS.gene96347.t1 | AT4G25860 | 46.687 | 332 | 142 | 6 | 37 | 335 | 53 | 382 | 2.25e-90 | 275 |
| MS.gene96347.t1 | AT4G25850 | 41.353 | 266 | 99 | 7 | 6 | 220 | 8 | 267 | 1.90e-51 | 172 |
Find 93 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGTCAAAAGGGGAAATT+TGG | 0.145591 | 8.4:-6959652 | MS.gene96347:CDS |
| AGTACTTGCTGTAATGTATT+TGG | 0.169490 | 8.4:+6962966 | None:intergenic |
| ACTACACGACCACAGAAATT+TGG | 0.188123 | 8.4:-6962522 | MS.gene96347:CDS |
| AACAGAATCTGCTCTTGTTT+GGG | 0.210716 | 8.4:-6959771 | MS.gene96347:CDS |
| AGACAATCTTTCTTTGGATT+TGG | 0.216954 | 8.4:-6960497 | MS.gene96347:CDS |
| CAACAGAATCTGCTCTTGTT+TGG | 0.245208 | 8.4:-6959772 | MS.gene96347:CDS |
| CTGCTACCAGGCCTGTTTCT+AGG | 0.260032 | 8.4:+6960534 | None:intergenic |
| GCTCCCTACAATCCCATTCT+TGG | 0.262230 | 8.4:-6962495 | MS.gene96347:CDS |
| TTCCAATTCCTGGTATTGAT+TGG | 0.273123 | 8.4:-6960581 | MS.gene96347:CDS |
| TACACTAGACAATCTTTCTT+TGG | 0.278088 | 8.4:-6960503 | MS.gene96347:CDS |
| GGAAATCGAAGACGGATAAA+AGG | 0.297030 | 8.4:-6960470 | MS.gene96347:CDS |
| GACAATCTTTCTTTGGATTT+GGG | 0.297690 | 8.4:-6960496 | MS.gene96347:CDS |
| TTCAGATTTCTTCCAATTCC+TGG | 0.299189 | 8.4:-6960591 | MS.gene96347:intron |
| TTTATAACATTGACGGTCAT+TGG | 0.319680 | 8.4:-6960415 | MS.gene96347:CDS |
| AGGGTGGCAATAGGAGCATT+TGG | 0.340915 | 8.4:+6959557 | None:intergenic |
| TCCAATTCCTGGTATTGATT+GGG | 0.344320 | 8.4:-6960580 | MS.gene96347:CDS |
| GATCCTTAACAAAAGGAGTA+TGG | 0.346607 | 8.4:+6959991 | None:intergenic |
| TCCCCAATCGTTGCTTATGA+TGG | 0.379990 | 8.4:+6959733 | None:intergenic |
| GATCCAGATAAATAATTATA+GGG | 0.385472 | 8.4:+6959538 | None:intergenic |
| ACCCAATCAATACCAGGAAT+TGG | 0.388589 | 8.4:+6960579 | None:intergenic |
| CTTATCCGGTGCCTAGAAAC+AGG | 0.419772 | 8.4:-6960545 | MS.gene96347:CDS |
| AATAATTATAGGGTGGCAAT+AGG | 0.420289 | 8.4:+6959548 | None:intergenic |
| TCTCCACTTCCAAAGTTTGT+TGG | 0.426253 | 8.4:-6960850 | MS.gene96347:intron |
| TGAGTCACTATAAAATGTTT+AGG | 0.427110 | 8.4:+6959626 | None:intergenic |
| ACAGTTCCAGCCATCTTCAT+TGG | 0.435258 | 8.4:+6959601 | None:intergenic |
| AATGTTCTTTATAACATTGA+CGG | 0.438522 | 8.4:-6960422 | MS.gene96347:CDS |
| TTATAACATTGACGGTCATT+GGG | 0.448664 | 8.4:-6960414 | MS.gene96347:CDS |
| ATGGTGGGTTTCACCAAGAA+TGG | 0.451451 | 8.4:+6962482 | None:intergenic |
| TTAGAGAAAGAGAGTCAAAA+GGG | 0.454350 | 8.4:-6959661 | MS.gene96347:CDS |
| AGCCATCATAAGCAACGATT+GGG | 0.455090 | 8.4:-6959735 | MS.gene96347:CDS |
| AGAGTCAAAAGGGGAAATTT+GGG | 0.456782 | 8.4:-6959651 | MS.gene96347:CDS |
| AATCGTTGCTTATGATGGCT+TGG | 0.457816 | 8.4:+6959738 | None:intergenic |
| CTTAGAGAAAGAGAGTCAAA+AGG | 0.461372 | 8.4:-6959662 | MS.gene96347:CDS |
| CCTTAACGTCTTGCTCGAAC+AGG | 0.465737 | 8.4:-6962445 | MS.gene96347:intron |
| TCTTTCTTTGGATTTGGGTC+GGG | 0.467324 | 8.4:-6960491 | MS.gene96347:CDS |
| GGGTGGCAATAGGAGCATTT+GGG | 0.468418 | 8.4:+6959558 | None:intergenic |
| GGTTGGCAATGTCACTTATC+CGG | 0.468652 | 8.4:-6960559 | MS.gene96347:CDS |
| ATCTTTCTTTGGATTTGGGT+CGG | 0.469873 | 8.4:-6960492 | MS.gene96347:CDS |
| ACCTCTAGATCCTTAACAAA+AGG | 0.474417 | 8.4:+6959984 | None:intergenic |
| CAAGTCTACTCCTGTGGCTG+TGG | 0.475561 | 8.4:+6962614 | None:intergenic |
| TACCATTGAAGCTGTGACTT+AGG | 0.485158 | 8.4:+6962654 | None:intergenic |
| TTCACCAAGAATGGGATTGT+AGG | 0.487044 | 8.4:+6962491 | None:intergenic |
| GAAACCCACCATGTTTCTAA+AGG | 0.495301 | 8.4:-6962471 | MS.gene96347:CDS |
| AAACCCACCATGTTTCTAAA+GGG | 0.496469 | 8.4:-6962470 | MS.gene96347:CDS |
| TTACCAACAAACTTTGGAAG+TGG | 0.498053 | 8.4:+6960847 | None:intergenic |
| TGGTGGGTTTCACCAAGAAT+GGG | 0.499357 | 8.4:+6962483 | None:intergenic |
| GCAGGTTTCACACCATCCTC+AGG | 0.503834 | 8.4:-6960929 | MS.gene96347:intron |
| CTGTGACTTAGGCATGTTGA+AGG | 0.504962 | 8.4:+6962665 | None:intergenic |
| CCTGTTCGAGCAAGACGTTA+AGG | 0.505938 | 8.4:+6962445 | None:intergenic |
| AAGCCATCATAAGCAACGAT+TGG | 0.513927 | 8.4:-6959736 | MS.gene96347:CDS |
| TCACCAAGAATGGGATTGTA+GGG | 0.514686 | 8.4:+6962492 | None:intergenic |
| CTCATACCAATGAAGATGGC+TGG | 0.515393 | 8.4:-6959607 | MS.gene96347:CDS |
| TGCCTAAGTCACAGCTTCAA+TGG | 0.525691 | 8.4:-6962656 | MS.gene96347:CDS |
| AAGTCACAGCTTCAATGGTA+TGG | 0.534057 | 8.4:-6962651 | MS.gene96347:CDS |
| AACAAATCATCGGATTCTGA+TGG | 0.535295 | 8.4:-6963002 | MS.gene96347:CDS |
| TGTGTCTATTCCACAGCCAC+AGG | 0.535366 | 8.4:-6962624 | MS.gene96347:CDS |
| GAAATCGAAGACGGATAAAA+GGG | 0.537567 | 8.4:-6960469 | MS.gene96347:CDS |
| ACTGTTCACCAATTCAAAAG+TGG | 0.544922 | 8.4:-6959583 | MS.gene96347:CDS |
| GTGACTCATACCAATGAAGA+TGG | 0.549751 | 8.4:-6959611 | MS.gene96347:CDS |
| ATTCCTGGTATTGATTGGGT+TGG | 0.551107 | 8.4:-6960576 | MS.gene96347:CDS |
| GACTTATATCAGTAGTAGCA+TGG | 0.557193 | 8.4:-6962554 | MS.gene96347:CDS |
| ACAGAATCTGCTCTTGTTTG+GGG | 0.557754 | 8.4:-6959770 | MS.gene96347:CDS |
| ACAAATCATCGGATTCTGAT+GGG | 0.561719 | 8.4:-6963001 | MS.gene96347:CDS |
| ACATTGACGGTCATTGGGAT+AGG | 0.562966 | 8.4:-6960409 | MS.gene96347:intron |
| TGTAGCTCAATTCTGCTACC+AGG | 0.567744 | 8.4:+6960522 | None:intergenic |
| TTTCCATCTGATCAGTGGCA+TGG | 0.571356 | 8.4:+6960896 | None:intergenic |
| CCAGGCCTGTTTCTAGGCAC+CGG | 0.578301 | 8.4:+6960540 | None:intergenic |
| TAAGGTTCCCTTTAGAAACA+TGG | 0.582927 | 8.4:+6962463 | None:intergenic |
| AATAGACAACAACAAATCAT+CGG | 0.591062 | 8.4:-6963012 | MS.gene96347:CDS |
| ATTCCATGCCACTGATCAGA+TGG | 0.593014 | 8.4:-6960899 | MS.gene96347:CDS |
| CCGGTGCCTAGAAACAGGCC+TGG | 0.598286 | 8.4:-6960540 | MS.gene96347:CDS |
| GTTTAGCAAGTCTACTCCTG+TGG | 0.609510 | 8.4:+6962608 | None:intergenic |
| TTGTTGTCTATTGTTGCGAG+TGG | 0.612182 | 8.4:+6963023 | None:intergenic |
| CTGTTCACCAATTCAAAAGT+GGG | 0.616115 | 8.4:-6959582 | MS.gene96347:CDS |
| GTTCCCTTTAGAAACATGGT+GGG | 0.616437 | 8.4:+6962467 | None:intergenic |
| CAAACAAGAGCAGATTCTGT+TGG | 0.621500 | 8.4:+6959773 | None:intergenic |
| CGATTGGGGAAAAGCAAGAG+AGG | 0.622181 | 8.4:-6959720 | MS.gene96347:CDS |
| TTGCTAAACAACATCAACAA+TGG | 0.626138 | 8.4:-6962594 | MS.gene96347:CDS |
| GGTTCCCTTTAGAAACATGG+TGG | 0.629919 | 8.4:+6962466 | None:intergenic |
| AAGAGAGGCAAAGAACACTC+TGG | 0.634477 | 8.4:-6959705 | MS.gene96347:CDS |
| CAAACTTTGGAAGTGGAGAG+TGG | 0.635431 | 8.4:+6960854 | None:intergenic |
| TTGCCAACCCAATCAATACC+AGG | 0.642684 | 8.4:+6960573 | None:intergenic |
| TTGGGTCGGGAAATCGAAGA+CGG | 0.645859 | 8.4:-6960478 | MS.gene96347:CDS |
| CCAGATAAATAATTATAGGG+TGG | 0.646503 | 8.4:+6959541 | None:intergenic |
| TTAGGCATGTTGAAGGTAGG+TGG | 0.647292 | 8.4:+6962672 | None:intergenic |
| GCCATCATAAGCAACGATTG+GGG | 0.655456 | 8.4:-6959734 | MS.gene96347:CDS |
| GACTTAGGCATGTTGAAGGT+AGG | 0.658758 | 8.4:+6962669 | None:intergenic |
| TAGAGAAAGAGAGTCAAAAG+GGG | 0.666484 | 8.4:-6959660 | MS.gene96347:CDS |
| GGAGCAAATCCAAATTTCTG+TGG | 0.677683 | 8.4:+6962513 | None:intergenic |
| AGAGGCAAAGAACACTCTGG+AGG | 0.685308 | 8.4:-6959702 | MS.gene96347:CDS |
| GGAATGCAGATACCTGAGGA+TGG | 0.705504 | 8.4:+6960917 | None:intergenic |
| ACACTCTGGAGGAAACTCAG+AGG | 0.724153 | 8.4:-6959691 | MS.gene96347:CDS |
| GCATGGAATGCAGATACCTG+AGG | 0.732347 | 8.4:+6960913 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACGTAAATAATATAT+AGG | + | chr8.4:6962580-6962599 | None:intergenic | 10.0% |
| !!! | ATTTAAATTTAAAGTGATAA+TGG | + | chr8.4:6960640-6960659 | None:intergenic | 10.0% |
| !!! | TAAAAAGAAATTTTTTTCTT+AGG | - | chr8.4:6960745-6960764 | MS.gene96347:intron | 10.0% |
| !!! | TTTTATTATTATTGATTTTG+AGG | + | chr8.4:6961991-6962010 | None:intergenic | 10.0% |
| !! | AAAAATGAAAAAGGATATAA+AGG | + | chr8.4:6962828-6962847 | None:intergenic | 15.0% |
| !! | AATTGGTCAATAAAAATATA+TGG | + | chr8.4:6959956-6959975 | None:intergenic | 15.0% |
| !! | ACTAGTTAAAGATTAAAAAA+TGG | + | chr8.4:6960837-6960856 | None:intergenic | 15.0% |
| !! | ACTTAAAATTATAATTCTTG+TGG | - | chr8.4:6961361-6961380 | MS.gene96347:intron | 15.0% |
| !! | ATAAAACAAATTATAAATGC+AGG | - | chr8.4:6962005-6962024 | MS.gene96347:intron | 15.0% |
| !! | TATCTCATAATGTATTTATT+TGG | - | chr8.4:6959568-6959587 | MS.gene96347:CDS | 15.0% |
| !! | TCAATAAAAATATATGGATT+AGG | + | chr8.4:6959950-6959969 | None:intergenic | 15.0% |
| !! | TCACATTAAAAAAATGAAAA+AGG | + | chr8.4:6962837-6962856 | None:intergenic | 15.0% |
| !!! | ACAAGAATTATAATTTTAAG+TGG | + | chr8.4:6961362-6961381 | None:intergenic | 15.0% |
| !!! | ATATGATTCAATTTTAGATA+TGG | - | chr8.4:6961311-6961330 | MS.gene96347:intron | 15.0% |
| !!! | ATTTTATATGATTAGGATTT+AGG | + | chr8.4:6962614-6962633 | None:intergenic | 15.0% |
| !!! | TATTCGATTCTTTTTAATTT+AGG | + | chr8.4:6961634-6961653 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTGTTTAAAACT+TGG | - | chr8.4:6960369-6960388 | MS.gene96347:intron | 15.0% |
| !! | AAATTAATTTCGATACTTCA+TGG | + | chr8.4:6961145-6961164 | None:intergenic | 20.0% |
| !! | AATCTTTAACTAGTATCTTA+AGG | - | chr8.4:6960843-6960862 | MS.gene96347:intron | 20.0% |
| !! | AATGTTCTTTATAACATTGA+CGG | - | chr8.4:6962288-6962307 | MS.gene96347:intron | 20.0% |
| !! | AATTAATTTCGATACTTCAT+GGG | + | chr8.4:6961144-6961163 | None:intergenic | 20.0% |
| !! | AGAAATCTGAATAAGAAATT+TGG | + | chr8.4:6962110-6962129 | None:intergenic | 20.0% |
| !! | AGATCAAATGTAAATTTCAT+AGG | + | chr8.4:6959851-6959870 | None:intergenic | 20.0% |
| !! | ATACATTATGAGATATACAT+TGG | + | chr8.4:6959563-6959582 | None:intergenic | 20.0% |
| !! | ATATTATATTTGCACATGTT+GGG | + | chr8.4:6961432-6961451 | None:intergenic | 20.0% |
| !! | GAAATGACCAAAATAAATAA+CGG | + | chr8.4:6960618-6960637 | None:intergenic | 20.0% |
| !! | TACTTATTATCTTTGATATG+AGG | - | chr8.4:6961013-6961032 | MS.gene96347:intron | 20.0% |
| !!! | AGATTTTAGGTTCAATTTTA+TGG | + | chr8.4:6960509-6960528 | None:intergenic | 20.0% |
| !!! | ATTATTATTGATTTTGAGGA+TGG | + | chr8.4:6961987-6962006 | None:intergenic | 20.0% |
| !!! | CAGCATTATTTTATATGATT+AGG | + | chr8.4:6962621-6962640 | None:intergenic | 20.0% |
| !!! | TATTTTGCCGTTATTTATTT+TGG | - | chr8.4:6960608-6960627 | MS.gene96347:intron | 20.0% |
| ! | AAAATGAAAATGTTCATGCA+TGG | - | chr8.4:6962856-6962875 | MS.gene96347:intron | 25.0% |
| ! | AAACAACTAAGTTAAAAGAC+CGG | + | chr8.4:6960348-6960367 | None:intergenic | 25.0% |
| ! | AAATTATAAATGCAGGTACA+GGG | - | chr8.4:6962012-6962031 | MS.gene96347:intron | 25.0% |
| ! | AAATTTACATTTGATCTGCT+GGG | - | chr8.4:6959854-6959873 | MS.gene96347:intron | 25.0% |
| ! | AATAACGGCAAAATACATAA+AGG | + | chr8.4:6960603-6960622 | None:intergenic | 25.0% |
| ! | AATAGACAACAACAAATCAT+CGG | - | chr8.4:6959698-6959717 | MS.gene96347:CDS | 25.0% |
| ! | ATCATATAAAATAATGCTGC+AGG | - | chr8.4:6962622-6962641 | MS.gene96347:CDS | 25.0% |
| ! | ATTATAATTCTTGTGGATGA+AGG | - | chr8.4:6961368-6961387 | MS.gene96347:intron | 25.0% |
| ! | CAACATGTGCAAATATAATA+TGG | - | chr8.4:6961431-6961450 | MS.gene96347:intron | 25.0% |
| ! | CAATATGAAATGTGCTAAAT+AGG | - | chr8.4:6962532-6962551 | MS.gene96347:CDS | 25.0% |
| ! | CATATTATATTTGCACATGT+TGG | + | chr8.4:6961433-6961452 | None:intergenic | 25.0% |
| ! | TATTTGTGTATTTGTAATGC+AGG | - | chr8.4:6959641-6959660 | MS.gene96347:CDS | 25.0% |
| ! | TCATATAAAATAATGCTGCA+GGG | - | chr8.4:6962623-6962642 | MS.gene96347:CDS | 25.0% |
| ! | TGAGTCACTATAAAATGTTT+AGG | + | chr8.4:6963087-6963106 | None:intergenic | 25.0% |
| ! | TGTGAAAAATCTAAACTAAC+CGG | - | chr8.4:6959599-6959618 | MS.gene96347:CDS | 25.0% |
| ! | TTAAGATGTATCAACATTGT+AGG | - | chr8.4:6960662-6960681 | MS.gene96347:intron | 25.0% |
| !! | ATAAATGCTTATGCTTTGAA+GGG | - | chr8.4:6960889-6960908 | MS.gene96347:CDS | 25.0% |
| !! | CAATACCAAAACATGTTTTT+AGG | - | chr8.4:6962798-6962817 | MS.gene96347:intron | 25.0% |
| !!! | AGTTTTGGTCTAACTTTAAA+TGG | + | chr8.4:6960455-6960474 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTTATACGACCA+TGG | - | chr8.4:6960917-6960936 | MS.gene96347:CDS | 25.0% |
| !!! | TTTTGTTTACCAACAAACTT+TGG | + | chr8.4:6961872-6961891 | None:intergenic | 25.0% |
| AAAGACAGTTAAATTTGTGC+AGG | - | chr8.4:6961763-6961782 | MS.gene96347:intron | 30.0% | |
| AAAGCATAAGCATTTATCGT+AGG | + | chr8.4:6960886-6960905 | None:intergenic | 30.0% | |
| AACAACTAAGTTAAAAGACC+GGG | + | chr8.4:6960347-6960366 | None:intergenic | 30.0% | |
| AATTATAAATGCAGGTACAG+GGG | - | chr8.4:6962013-6962032 | MS.gene96347:intron | 30.0% | |
| AATTCCACAACCAATTTATG+GGG | - | chr8.4:6960427-6960446 | MS.gene96347:CDS | 30.0% | |
| AGACAATCTTTCTTTGGATT+TGG | - | chr8.4:6962213-6962232 | MS.gene96347:intron | 30.0% | |
| CAAATTATAAATGCAGGTAC+AGG | - | chr8.4:6962011-6962030 | MS.gene96347:intron | 30.0% | |
| CAATTCCACAACCAATTTAT+GGG | - | chr8.4:6960426-6960445 | MS.gene96347:CDS | 30.0% | |
| CCTACCACTTATACAATAAA+GGG | - | chr8.4:6960699-6960718 | MS.gene96347:intron | 30.0% | |
| CCTTTATTGTATAAGTGGTA+GGG | + | chr8.4:6960701-6960720 | None:intergenic | 30.0% | |
| GAAATTTACATTTGATCTGC+TGG | - | chr8.4:6959853-6959872 | MS.gene96347:intron | 30.0% | |
| GACAATCTTTCTTTGGATTT+GGG | - | chr8.4:6962214-6962233 | MS.gene96347:intron | 30.0% | |
| GATAAATGCTTATGCTTTGA+AGG | - | chr8.4:6960888-6960907 | MS.gene96347:CDS | 30.0% | |
| GTTTCCCTTTATTGTATAAG+TGG | + | chr8.4:6960706-6960725 | None:intergenic | 30.0% | |
| TAAGTCTCTTCAAGAATGTT+CGG | - | chr8.4:6959766-6959785 | MS.gene96347:CDS | 30.0% | |
| TACACTAGACAATCTTTCTT+TGG | - | chr8.4:6962207-6962226 | MS.gene96347:intron | 30.0% | |
| TTAGAGAAAGAGAGTCAAAA+GGG | - | chr8.4:6963049-6963068 | MS.gene96347:CDS | 30.0% | |
| TTATAACATTGACGGTCATT+GGG | - | chr8.4:6962296-6962315 | MS.gene96347:intron | 30.0% | |
| TTGCTAAACAACATCAACAA+TGG | - | chr8.4:6960116-6960135 | MS.gene96347:intron | 30.0% | |
| TTTATAACATTGACGGTCAT+TGG | - | chr8.4:6962295-6962314 | MS.gene96347:intron | 30.0% | |
| ! | ATTTAGGATACGATACAACT+AGG | + | chr8.4:6961618-6961637 | None:intergenic | 30.0% |
| ! | GATCACCTAAAAACATGTTT+TGG | + | chr8.4:6962806-6962825 | None:intergenic | 30.0% |
| ! | GTATCTTAAGGAAACTTGTT+AGG | - | chr8.4:6960855-6960874 | MS.gene96347:CDS | 30.0% |
| !! | ACACTCTAAAACAATACATC+AGG | + | chr8.4:6962913-6962932 | None:intergenic | 30.0% |
| !! | AGTACTTGCTGTAATGTATT+TGG | + | chr8.4:6959747-6959766 | None:intergenic | 30.0% |
| !! | ATTCATGCCAACTGTTTTAA+AGG | - | chr8.4:6960549-6960568 | MS.gene96347:CDS | 30.0% |
| !! | CACTCTAAAACAATACATCA+GGG | + | chr8.4:6962912-6962931 | None:intergenic | 30.0% |
| !! | TTCATGCCAACTGTTTTAAA+GGG | - | chr8.4:6960550-6960569 | MS.gene96347:CDS | 30.0% |
| !! | TTTTGAGGATGGAAAAGTTT+TGG | + | chr8.4:6961976-6961995 | None:intergenic | 30.0% |
| !!! | AGATTTTACAAGAAGTGTTC+CGG | + | chr8.4:6959621-6959640 | None:intergenic | 30.0% |
| !!! | ATGCAAAAGAAGTGTTTTCT+GGG | - | chr8.4:6962694-6962713 | MS.gene96347:intron | 30.0% |
| !!! | CAATTTTATGGTGTCGATTT+TGG | + | chr8.4:6960497-6960516 | None:intergenic | 30.0% |
| !!! | TGCGCTTTTTTCAAGATTTT+AGG | + | chr8.4:6960522-6960541 | None:intergenic | 30.0% |
| AAAAAATTTGTGGTCCCACT+TGG | + | chr8.4:6960319-6960338 | None:intergenic | 35.0% | |
| AACAAATCATCGGATTCTGA+TGG | - | chr8.4:6959708-6959727 | MS.gene96347:CDS | 35.0% | |
| ACAAATCATCGGATTCTGAT+GGG | - | chr8.4:6959709-6959728 | MS.gene96347:CDS | 35.0% | |
| ACCTCTAGATCCTTAACAAA+AGG | + | chr8.4:6962729-6962748 | None:intergenic | 35.0% | |
| ACTGTTCACCAATTCAAAAG+TGG | - | chr8.4:6963127-6963146 | MS.gene96347:intron | 35.0% | |
| AGAGTCAAAAGGGGAAATTT+GGG | - | chr8.4:6963059-6963078 | MS.gene96347:intron | 35.0% | |
| AGTTAGACCAAAACTCTGTA+TGG | - | chr8.4:6960460-6960479 | MS.gene96347:CDS | 35.0% | |
| ATCTTTCTTTGGATTTGGGT+CGG | - | chr8.4:6962218-6962237 | MS.gene96347:intron | 35.0% | |
| CATATGTCTCTCCATGATTA+TGG | + | chr8.4:6962076-6962095 | None:intergenic | 35.0% | |
| CCAATAACCGATTAATTCGA+GGG | - | chr8.4:6960400-6960419 | MS.gene96347:intron | 35.0% | |
| CCAATTCCACAACCAATTTA+TGG | - | chr8.4:6960425-6960444 | MS.gene96347:CDS | 35.0% | |
| CCATAAATTGGTTGTGGAAT+TGG | + | chr8.4:6960428-6960447 | None:intergenic | 35.0% | |
| CCCTACCACTTATACAATAA+AGG | - | chr8.4:6960698-6960717 | MS.gene96347:intron | 35.0% | |
| CCCTTTATTGTATAAGTGGT+AGG | + | chr8.4:6960702-6960721 | None:intergenic | 35.0% | |
| CTGTTCACCAATTCAAAAGT+GGG | - | chr8.4:6963128-6963147 | MS.gene96347:intron | 35.0% | |
| CTTAGAGAAAGAGAGTCAAA+AGG | - | chr8.4:6963048-6963067 | MS.gene96347:CDS | 35.0% | |
| GAAATATCTTTGCGTATCTG+TGG | + | chr8.4:6961209-6961228 | None:intergenic | 35.0% | |
| GAAATCGAAGACGGATAAAA+GGG | - | chr8.4:6962241-6962260 | MS.gene96347:intron | 35.0% | |
| GACTTATATCAGTAGTAGCA+TGG | - | chr8.4:6960156-6960175 | MS.gene96347:intron | 35.0% | |
| GATCCTTAACAAAAGGAGTA+TGG | + | chr8.4:6962722-6962741 | None:intergenic | 35.0% | |
| GTATCCTAGAAAAAGACGAA+GGG | - | chr8.4:6961248-6961267 | MS.gene96347:intron | 35.0% | |
| TAGAGAAAGAGAGTCAAAAG+GGG | - | chr8.4:6963050-6963069 | MS.gene96347:CDS | 35.0% | |
| TCAGGGTAATAGTCACATAT+GGG | - | chr8.4:6960942-6960961 | MS.gene96347:intron | 35.0% | |
| TCCAATAACCGATTAATTCG+AGG | - | chr8.4:6960399-6960418 | MS.gene96347:intron | 35.0% | |
| TGGAATATCGGTATCTGATA+CGG | + | chr8.4:6961107-6961126 | None:intergenic | 35.0% | |
| TGTCATATCAAGTGTCCATA+CGG | + | chr8.4:6962405-6962424 | None:intergenic | 35.0% | |
| TTAAATGGAGCCCCATAAAT+TGG | + | chr8.4:6960440-6960459 | None:intergenic | 35.0% | |
| TTCAGATTTCTTCCAATTCC+TGG | - | chr8.4:6962119-6962138 | MS.gene96347:intron | 35.0% | |
| TTTCATATTGAAGACGCATC+TGG | + | chr8.4:6962522-6962541 | None:intergenic | 35.0% | |
| ! | AAACCCACCATGTTTCTAAA+GGG | - | chr8.4:6960240-6960259 | MS.gene96347:intron | 35.0% |
| ! | AACAGAATCTGCTCTTGTTT+GGG | - | chr8.4:6962939-6962958 | MS.gene96347:intron | 35.0% |
| ! | AATCTTGAAAAAAGCGCACT+CGG | - | chr8.4:6960524-6960543 | MS.gene96347:CDS | 35.0% |
| ! | ATTGGTTCCCTCGAATTAAT+CGG | + | chr8.4:6960410-6960429 | None:intergenic | 35.0% |
| ! | TAAGGTTCCCTTTAGAAACA+TGG | + | chr8.4:6960250-6960269 | None:intergenic | 35.0% |
| ! | TATGTTTTCCATCTGATCAG+TGG | + | chr8.4:6961822-6961841 | None:intergenic | 35.0% |
| ! | TCCTTTTGTTAAGGATCTAG+AGG | - | chr8.4:6962725-6962744 | MS.gene96347:intron | 35.0% |
| ! | TTACCAACAAACTTTGGAAG+TGG | + | chr8.4:6961866-6961885 | None:intergenic | 35.0% |
| ! | TTTACCCTTCGTCTTTTTCT+AGG | + | chr8.4:6961255-6961274 | None:intergenic | 35.0% |
| !! | ATGAGACCCTTTAAAACAGT+TGG | + | chr8.4:6960559-6960578 | None:intergenic | 35.0% |
| !! | CTTTTGACTCTCTTTCTCTA+AGG | + | chr8.4:6963050-6963069 | None:intergenic | 35.0% |
| !! | GCATATATATCAAGCACTGA+CGG | - | chr8.4:6962379-6962398 | MS.gene96347:intron | 35.0% |
| !! | TCCAATTCCTGGTATTGATT+GGG | - | chr8.4:6962130-6962149 | MS.gene96347:intron | 35.0% |
| !! | TTCCAATTCCTGGTATTGAT+TGG | - | chr8.4:6962129-6962148 | MS.gene96347:intron | 35.0% |
| !!! | CCACAAATTTTTTTGTCACC+CGG | - | chr8.4:6960326-6960345 | MS.gene96347:intron | 35.0% |
| !!! | GATGCAAAAGAAGTGTTTTC+TGG | - | chr8.4:6962693-6962712 | MS.gene96347:intron | 35.0% |
| !!! | TTTATGGTGTCGATTTTGGT+TGG | + | chr8.4:6960493-6960512 | None:intergenic | 35.0% |
| AAGCCATCATAAGCAACGAT+TGG | - | chr8.4:6962974-6962993 | MS.gene96347:CDS | 40.0% | |
| AAGTCACAGCTTCAATGGTA+TGG | - | chr8.4:6960059-6960078 | MS.gene96347:CDS | 40.0% | |
| AATCGTTGCTTATGATGGCT+TGG | + | chr8.4:6962975-6962994 | None:intergenic | 40.0% | |
| ACCCAATCAATACCAGGAAT+TGG | + | chr8.4:6962134-6962153 | None:intergenic | 40.0% | |
| ACCGATATTCCACAGATAGT+CGG | - | chr8.4:6961115-6961134 | MS.gene96347:intron | 40.0% | |
| ACTACACGACCACAGAAATT+TGG | - | chr8.4:6960188-6960207 | MS.gene96347:intron | 40.0% | |
| ACTTCTCAGCATATAGTGTG+CGG | - | chr8.4:6959908-6959927 | MS.gene96347:intron | 40.0% | |
| AGCCATCATAAGCAACGATT+GGG | - | chr8.4:6962975-6962994 | MS.gene96347:CDS | 40.0% | |
| ATCTGGTATCCGACATTGAT+AGG | + | chr8.4:6962505-6962524 | None:intergenic | 40.0% | |
| ATGTCTCTCCATGATTATGG+AGG | + | chr8.4:6962073-6962092 | None:intergenic | 40.0% | |
| CAAACAAGAGCAGATTCTGT+TGG | + | chr8.4:6962940-6962959 | None:intergenic | 40.0% | |
| CAACAGAATCTGCTCTTGTT+TGG | - | chr8.4:6962938-6962957 | MS.gene96347:intron | 40.0% | |
| CCCTCGAATTAATCGGTTAT+TGG | + | chr8.4:6960403-6960422 | None:intergenic | 40.0% | |
| CCGGGTGACAAAAAAATTTG+TGG | + | chr8.4:6960329-6960348 | None:intergenic | 40.0% | |
| CGTATCCTAGAAAAAGACGA+AGG | - | chr8.4:6961247-6961266 | MS.gene96347:intron | 40.0% | |
| CTCTTCAAGAATGTTCGGTT+AGG | - | chr8.4:6959771-6959790 | MS.gene96347:CDS | 40.0% | |
| GAGAGTCAAAAGGGGAAATT+TGG | - | chr8.4:6963058-6963077 | MS.gene96347:intron | 40.0% | |
| GGAAATCGAAGACGGATAAA+AGG | - | chr8.4:6962240-6962259 | MS.gene96347:intron | 40.0% | |
| GGAATATCGGTATCTGATAC+GGG | + | chr8.4:6961106-6961125 | None:intergenic | 40.0% | |
| GGAGCAAATCCAAATTTCTG+TGG | + | chr8.4:6960200-6960219 | None:intergenic | 40.0% | |
| GTCAGGGTAATAGTCACATA+TGG | - | chr8.4:6960941-6960960 | MS.gene96347:intron | 40.0% | |
| GTGACTCATACCAATGAAGA+TGG | - | chr8.4:6963099-6963118 | MS.gene96347:intron | 40.0% | |
| TACATTTGATCTGCTGGGAT+GGG | - | chr8.4:6959859-6959878 | MS.gene96347:intron | 40.0% | |
| TACCATTGAAGCTGTGACTT+AGG | + | chr8.4:6960059-6960078 | None:intergenic | 40.0% | |
| TCACCAAGAATGGGATTGTA+GGG | + | chr8.4:6960221-6960240 | None:intergenic | 40.0% | |
| TCATGTCCACTCAATAGTGT+TGG | - | chr8.4:6961710-6961729 | MS.gene96347:intron | 40.0% | |
| TCCGACTATCTGTGGAATAT+CGG | + | chr8.4:6961119-6961138 | None:intergenic | 40.0% | |
| TCTCCACTTCCAAAGTTTGT+TGG | - | chr8.4:6961860-6961879 | MS.gene96347:intron | 40.0% | |
| TCTTTCTTTGGATTTGGGTC+GGG | - | chr8.4:6962219-6962238 | MS.gene96347:intron | 40.0% | |
| TGATAGGACAGTGACACATA+TGG | + | chr8.4:6962489-6962508 | None:intergenic | 40.0% | |
| TGCTGAGAAGTGAAGAATTG+CGG | + | chr8.4:6959899-6959918 | None:intergenic | 40.0% | |
| TGTCACTGTCCTATCAATGT+CGG | - | chr8.4:6962493-6962512 | MS.gene96347:CDS | 40.0% | |
| TTACATTTGATCTGCTGGGA+TGG | - | chr8.4:6959858-6959877 | MS.gene96347:intron | 40.0% | |
| TTCACCAAGAATGGGATTGT+AGG | + | chr8.4:6960222-6960241 | None:intergenic | 40.0% | |
| TTGTTGTCTATTGTTGCGAG+TGG | + | chr8.4:6959690-6959709 | None:intergenic | 40.0% | |
| TTTGTGCCAACACTATTGAG+TGG | + | chr8.4:6961719-6961738 | None:intergenic | 40.0% | |
| ! | ACAGAATCTGCTCTTGTTTG+GGG | - | chr8.4:6962940-6962959 | MS.gene96347:intron | 40.0% |
| ! | GAAACCCACCATGTTTCTAA+AGG | - | chr8.4:6960239-6960258 | MS.gene96347:intron | 40.0% |
| ! | GCTCCATACTCCTTTTGTTA+AGG | - | chr8.4:6962716-6962735 | MS.gene96347:intron | 40.0% |
| ! | GTTCCCTTTAGAAACATGGT+GGG | + | chr8.4:6960246-6960265 | None:intergenic | 40.0% |
| !! | ATTCCTGGTATTGATTGGGT+TGG | - | chr8.4:6962134-6962153 | MS.gene96347:intron | 40.0% |
| !! | TTTGGGACCCACTTTTGAAT+TGG | + | chr8.4:6963138-6963157 | None:intergenic | 40.0% |
| AAGAGAGGCAAAGAACACTC+TGG | - | chr8.4:6963005-6963024 | MS.gene96347:CDS | 45.0% | |
| ACAGTTCCAGCCATCTTCAT+TGG | + | chr8.4:6963112-6963131 | None:intergenic | 45.0% | |
| ACATTGACGGTCATTGGGAT+AGG | - | chr8.4:6962301-6962320 | MS.gene96347:intron | 45.0% | |
| ATACGGGTACGATACATACG+GGG | + | chr8.4:6961664-6961683 | None:intergenic | 45.0% | |
| ATCTGATCTGTCACGCTTCA+AGG | - | chr8.4:6959794-6959813 | MS.gene96347:intron | 45.0% | |
| ATTCCATGCCACTGATCAGA+TGG | - | chr8.4:6961811-6961830 | MS.gene96347:intron | 45.0% | |
| CAACTGCACCTCCATAATCA+TGG | - | chr8.4:6962062-6962081 | MS.gene96347:intron | 45.0% | |
| CCACTTGGAACACGAACAAT+GGG | + | chr8.4:6960304-6960323 | None:intergenic | 45.0% | |
| CCATTGTTCGTGTTCCAAGT+GGG | - | chr8.4:6960302-6960321 | MS.gene96347:intron | 45.0% | |
| CTCATACCAATGAAGATGGC+TGG | - | chr8.4:6963103-6963122 | MS.gene96347:intron | 45.0% | |
| CTGTGACTTAGGCATGTTGA+AGG | + | chr8.4:6960048-6960067 | None:intergenic | 45.0% | |
| GACTTAGGCATGTTGAAGGT+AGG | + | chr8.4:6960044-6960063 | None:intergenic | 45.0% | |
| GATACGGGTACGATACATAC+GGG | + | chr8.4:6961665-6961684 | None:intergenic | 45.0% | |
| GCCATCATAAGCAACGATTG+GGG | - | chr8.4:6962976-6962995 | MS.gene96347:CDS | 45.0% | |
| GCTGAGAAGTGAAGAATTGC+GGG | + | chr8.4:6959898-6959917 | None:intergenic | 45.0% | |
| GGAACACGAACAATGGGAAA+AGG | + | chr8.4:6960298-6960317 | None:intergenic | 45.0% | |
| GGATACGGGTACGATACATA+CGG | + | chr8.4:6961666-6961685 | None:intergenic | 45.0% | |
| GTATGTATCGTACCCGTATC+CGG | - | chr8.4:6961665-6961684 | MS.gene96347:intron | 45.0% | |
| GTTTAGCAAGTCTACTCCTG+TGG | + | chr8.4:6960105-6960124 | None:intergenic | 45.0% | |
| TATGTATCGTACCCGTATCC+GGG | - | chr8.4:6961666-6961685 | MS.gene96347:intron | 45.0% | |
| TCCCCAATCGTTGCTTATGA+TGG | + | chr8.4:6962980-6962999 | None:intergenic | 45.0% | |
| TGAGGAAATCCACTCAACAG+TGG | - | chr8.4:6961031-6961050 | MS.gene96347:intron | 45.0% | |
| TGCCTAAGTCACAGCTTCAA+TGG | - | chr8.4:6960054-6960073 | MS.gene96347:CDS | 45.0% | |
| TGTAGCTCAATTCTGCTACC+AGG | + | chr8.4:6962191-6962210 | None:intergenic | 45.0% | |
| TTAGGCATGTTGAAGGTAGG+TGG | + | chr8.4:6960041-6960060 | None:intergenic | 45.0% | |
| TTGAGTGGACATGAGTACTC+TGG | + | chr8.4:6961704-6961723 | None:intergenic | 45.0% | |
| TTGCCAACCCAATCAATACC+AGG | + | chr8.4:6962140-6962159 | None:intergenic | 45.0% | |
| TTTATACGACCATGGCGTCA+GGG | - | chr8.4:6960925-6960944 | MS.gene96347:CDS | 45.0% | |
| TTTCCATCTGATCAGTGGCA+TGG | + | chr8.4:6961817-6961836 | None:intergenic | 45.0% | |
| ! | CAAACTTTGGAAGTGGAGAG+TGG | + | chr8.4:6961859-6961878 | None:intergenic | 45.0% |
| ! | GGTTCCCTTTAGAAACATGG+TGG | + | chr8.4:6960247-6960266 | None:intergenic | 45.0% |
| ! | GGTTGGCAATGTCACTTATC+CGG | - | chr8.4:6962151-6962170 | MS.gene96347:intron | 45.0% |
| !! | ATGGTGGGTTTCACCAAGAA+TGG | + | chr8.4:6960231-6960250 | None:intergenic | 45.0% |
| !! | TGGTGGGTTTCACCAAGAAT+GGG | + | chr8.4:6960230-6960249 | None:intergenic | 45.0% |
| !!! | AAAATAAATTCATTTTTAAT+TGG | + | chr8.4:6959973-6959992 | None:intergenic | 5.0% |
| AGAGGCAAAGAACACTCTGG+AGG | - | chr8.4:6963008-6963027 | MS.gene96347:CDS | 50.0% | |
| CAAGCCACTGCTATGAAGTC+CGG | - | chr8.4:6961059-6961078 | MS.gene96347:intron | 50.0% | |
| CATGGGTATCCGACTATCTG+TGG | + | chr8.4:6961127-6961146 | None:intergenic | 50.0% | |
| CCCACTTGGAACACGAACAA+TGG | + | chr8.4:6960305-6960324 | None:intergenic | 50.0% | |
| CCCATTGTTCGTGTTCCAAG+TGG | - | chr8.4:6960301-6960320 | MS.gene96347:intron | 50.0% | |
| CCTGTTCGAGCAAGACGTTA+AGG | + | chr8.4:6960268-6960287 | None:intergenic | 50.0% | |
| CCTTAACGTCTTGCTCGAAC+AGG | - | chr8.4:6960265-6960284 | MS.gene96347:intron | 50.0% | |
| CGATTGGGGAAAAGCAAGAG+AGG | - | chr8.4:6962990-6963009 | MS.gene96347:CDS | 50.0% | |
| CTTATCCGGTGCCTAGAAAC+AGG | - | chr8.4:6962165-6962184 | MS.gene96347:intron | 50.0% | |
| CTTGTGACACCACTGTTGAG+TGG | + | chr8.4:6961043-6961062 | None:intergenic | 50.0% | |
| GAAGTCCGGATACTCCAAGA+CGG | - | chr8.4:6961073-6961092 | MS.gene96347:intron | 50.0% | |
| GCATGGAATGCAGATACCTG+AGG | + | chr8.4:6961800-6961819 | None:intergenic | 50.0% | |
| GCTCCCTACAATCCCATTCT+TGG | - | chr8.4:6960215-6960234 | MS.gene96347:intron | 50.0% | |
| GGAATGCAGATACCTGAGGA+TGG | + | chr8.4:6961796-6961815 | None:intergenic | 50.0% | |
| GGAGCCCCATAAATTGGTTG+TGG | + | chr8.4:6960434-6960453 | None:intergenic | 50.0% | |
| GGGGTAGAAGTTGACATGCA+TGG | - | chr8.4:6962032-6962051 | MS.gene96347:intron | 50.0% | |
| GTACGATACATACGGGGATG+CGG | + | chr8.4:6961658-6961677 | None:intergenic | 50.0% | |
| GTATCCGGACTTCATAGCAG+TGG | + | chr8.4:6961066-6961085 | None:intergenic | 50.0% | |
| GTGGATGAAGGTAACGAGAG+AGG | - | chr8.4:6961380-6961399 | MS.gene96347:intron | 50.0% | |
| GTTTATACGACCATGGCGTC+AGG | - | chr8.4:6960924-6960943 | MS.gene96347:CDS | 50.0% | |
| TGACTATTACCCTGACGCCA+TGG | + | chr8.4:6960937-6960956 | None:intergenic | 50.0% | |
| TGTGTCTATTCCACAGCCAC+AGG | - | chr8.4:6960086-6960105 | MS.gene96347:intron | 50.0% | |
| TTGAAGGTAGGTGGTAGCTG+TGG | + | chr8.4:6960032-6960051 | None:intergenic | 50.0% | |
| TTGCTATGAAGCCCGGATAC+GGG | + | chr8.4:6961680-6961699 | None:intergenic | 50.0% | |
| TTGGGTCGGGAAATCGAAGA+CGG | - | chr8.4:6962232-6962251 | MS.gene96347:intron | 50.0% | |
| ! | ACACTCTGGAGGAAACTCAG+AGG | - | chr8.4:6963019-6963038 | MS.gene96347:CDS | 50.0% |
| ! | CTTGCTATGAAGCCCGGATA+CGG | + | chr8.4:6961681-6961700 | None:intergenic | 50.0% |
| ! | TGCGCGTCCATACAGAGTTT+TGG | + | chr8.4:6960470-6960489 | None:intergenic | 50.0% |
| !! | AGGGTGGCAATAGGAGCATT+TGG | + | chr8.4:6963156-6963175 | None:intergenic | 50.0% |
| !! | GGGTGGCAATAGGAGCATTT+GGG | + | chr8.4:6963155-6963174 | None:intergenic | 50.0% |
| ATACGGGTACGTCTCCGTCT+TGG | + | chr8.4:6961090-6961109 | None:intergenic | 55.0% | |
| CAAGTCTACTCCTGTGGCTG+TGG | + | chr8.4:6960099-6960118 | None:intergenic | 55.0% | |
| GCAGGTTTCACACCATCCTC+AGG | - | chr8.4:6961781-6961800 | MS.gene96347:intron | 55.0% | |
| ! | CGTCTCCGTCTTGGAGTATC+CGG | + | chr8.4:6961081-6961100 | None:intergenic | 55.0% |
| ! | CTGCTACCAGGCCTGTTTCT+AGG | + | chr8.4:6962179-6962198 | None:intergenic | 55.0% |
| !! | ATCAAGCACTGACGGCCGTA+TGG | - | chr8.4:6962387-6962406 | MS.gene96347:intron | 55.0% |
| !! | CTCTGGCTTGCTATGAAGCC+CGG | + | chr8.4:6961687-6961706 | None:intergenic | 55.0% |
| !! | CCAGGCCTGTTTCTAGGCAC+CGG | + | chr8.4:6962173-6962192 | None:intergenic | 60.0% |
| CCGGTGCCTAGAAACAGGCC+TGG | - | chr8.4:6962170-6962189 | MS.gene96347:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 6959553 | 6963179 | 6959553 | ID=MS.gene96347 |
| chr8.4 | mRNA | 6959553 | 6963179 | 6959553 | ID=MS.gene96347.t1;Parent=MS.gene96347 |
| chr8.4 | exon | 6963168 | 6963179 | 6963168 | ID=MS.gene96347.t1.exon1;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6963168 | 6963179 | 6963168 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6962971 | 6963069 | 6962971 | ID=MS.gene96347.t1.exon2;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6962971 | 6963069 | 6962971 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6962446 | 6962697 | 6962446 | ID=MS.gene96347.t1.exon3;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6962446 | 6962697 | 6962446 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6960851 | 6960947 | 6960851 | ID=MS.gene96347.t1.exon4;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6960851 | 6960947 | 6960851 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6960410 | 6960608 | 6960410 | ID=MS.gene96347.t1.exon5;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6960410 | 6960608 | 6960410 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6959986 | 6960088 | 6959986 | ID=MS.gene96347.t1.exon6;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6959986 | 6960088 | 6959986 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| chr8.4 | exon | 6959553 | 6959804 | 6959553 | ID=MS.gene96347.t1.exon7;Parent=MS.gene96347.t1 |
| chr8.4 | CDS | 6959553 | 6959804 | 6959553 | ID=cds.MS.gene96347.t1;Parent=MS.gene96347.t1 |
| Gene Sequence |
| Protein sequence |
