Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96445.t1 | RHN51920.1 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 6.10E-117 | 431.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96445.t1 | O65278 | 24.4 | 217 | 143 | 6 | 457 | 668 | 141 | 341 | 9.1e-13 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96445.t1 | A0A396HF22 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 4.4e-117 | 431.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054359 | MS.gene96445 | 0.864515 | 1.15E-64 | -1.69E-46 |
| MS.gene058870 | MS.gene96445 | 0.874656 | 5.69E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96445.t1 | MTR_8g009990 | 63.500 | 400 | 44 | 4 | 1 | 399 | 1 | 299 | 6.31e-161 | 466 |
| MS.gene96445.t1 | MTR_0008s0230 | 71.111 | 225 | 34 | 2 | 430 | 654 | 1 | 194 | 2.62e-103 | 318 |
| MS.gene96445.t1 | MTR_0008s0230 | 93.750 | 32 | 2 | 0 | 628 | 659 | 276 | 307 | 9.08e-14 | 73.2 |
| MS.gene96445.t1 | MTR_0186s0120 | 88.525 | 122 | 14 | 0 | 20 | 141 | 1 | 122 | 9.32e-70 | 223 |
| MS.gene96445.t1 | MTR_4g131870 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 2.66e-53 | 178 |
| MS.gene96445.t1 | MTR_1g054565 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 2.66e-53 | 178 |
| MS.gene96445.t1 | MTR_1g050130 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 7.79e-53 | 177 |
| MS.gene96445.t1 | MTR_3g014770 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 1.65e-52 | 176 |
| MS.gene96445.t1 | MTR_3g014760 | 32.812 | 192 | 117 | 3 | 22 | 213 | 9 | 188 | 6.62e-29 | 117 |
| MS.gene96445.t1 | MTR_4g131860 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 8.81e-29 | 117 |
| MS.gene96445.t1 | MTR_7g102530 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 9.69e-29 | 117 |
| MS.gene96445.t1 | MTR_1g050140 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.56e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96445.t1 | AT4G00690 | 24.887 | 221 | 137 | 8 | 457 | 668 | 141 | 341 | 3.25e-13 | 72.0 |
Find 171 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 1.2:+22465066 | MS.gene96445:CDS |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 1.2:+22465161 | MS.gene96445:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 1.2:+22464798 | MS.gene96445:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 1.2:-22465330 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 1.2:+22466587 | MS.gene96445:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 1.2:+22467556 | MS.gene96445:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 1.2:+22464445 | MS.gene96445:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 1.2:-22464787 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 1.2:-22465011 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 1.2:+22465712 | MS.gene96445:CDS |
| CCTTAGGTTATTAATATTGC+TGG | 0.300071 | 1.2:+22466400 | MS.gene96445:intron |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 1.2:+22467746 | MS.gene96445:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 1.2:+22465067 | MS.gene96445:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 1.2:+22467594 | MS.gene96445:CDS |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 1.2:+22464813 | MS.gene96445:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 1.2:-22465317 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 1.2:-22466615 | None:intergenic |
| AACACAAAGATTTGCTTTCC+CGG | 0.362338 | 1.2:+22465666 | MS.gene96445:CDS |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 1.2:-22465078 | None:intergenic |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 1.2:-22467294 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 1.2:+22465578 | MS.gene96445:CDS |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 1.2:+22467533 | MS.gene96445:CDS |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 1.2:+22466244 | MS.gene96445:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 1.2:+22465181 | MS.gene96445:CDS |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 1.2:+22464841 | MS.gene96445:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 1.2:-22464938 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 1.2:-22469376 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 1.2:-22465761 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 1.2:+22465508 | MS.gene96445:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 1.2:+22467747 | MS.gene96445:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 1.2:+22464681 | MS.gene96445:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 1.2:+22467378 | MS.gene96445:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 1.2:+22467518 | MS.gene96445:CDS |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 1.2:-22464846 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 1.2:+22469329 | MS.gene96445:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 1.2:-22464694 | None:intergenic |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 1.2:+22464791 | MS.gene96445:CDS |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 1.2:-22466276 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 1.2:+22466012 | MS.gene96445:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 1.2:+22466021 | MS.gene96445:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 1.2:-22465316 | None:intergenic |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 1.2:+22464704 | MS.gene96445:CDS |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 1.2:+22467720 | MS.gene96445:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 1.2:+22467559 | MS.gene96445:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 1.2:-22465188 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 1.2:-22464671 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 1.2:+22465724 | MS.gene96445:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 1.2:+22465920 | MS.gene96445:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 1.2:+22467571 | MS.gene96445:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 1.2:-22464623 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 1.2:-22464825 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 1.2:-22466632 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 1.2:+22467728 | MS.gene96445:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 1.2:+22465815 | MS.gene96445:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 1.2:+22466245 | MS.gene96445:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 1.2:+22465502 | MS.gene96445:intron |
| TATCTACCAACTTATTAGTA+CGG | 0.467587 | 1.2:-22464596 | None:intergenic |
| ATCTACCAACTTATTAGTAC+GGG | 0.467987 | 1.2:-22464595 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+GGG | 0.470670 | 1.2:+22464738 | MS.gene96445:CDS |
| TGGGATTTAGAGTAGGCGTT+AGG | 0.472541 | 1.2:+22464757 | MS.gene96445:CDS |
| GGAAAGCAAATCTTTGTGTT+CGG | 0.477390 | 1.2:-22465663 | None:intergenic |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 1.2:+22467729 | MS.gene96445:CDS |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 1.2:+22467314 | MS.gene96445:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 1.2:-22465192 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 1.2:+22464827 | MS.gene96445:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 1.2:+22465865 | MS.gene96445:CDS |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 1.2:+22464721 | MS.gene96445:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 1.2:-22465573 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 1.2:-22465364 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 1.2:+22464927 | MS.gene96445:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 1.2:-22465684 | None:intergenic |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 1.2:+22465997 | MS.gene96445:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 1.2:-22465580 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 1.2:-22467330 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 1.2:-22467784 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 1.2:+22465986 | MS.gene96445:CDS |
| TAGGTGGGATGCAAGTAGCT+TGG | 0.510938 | 1.2:+22464737 | MS.gene96445:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 1.2:-22467785 | None:intergenic |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 1.2:+22464690 | MS.gene96445:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 1.2:+22467568 | MS.gene96445:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 1.2:+22465987 | MS.gene96445:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 1.2:+22465572 | MS.gene96445:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 1.2:+22467336 | MS.gene96445:CDS |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 1.2:+22469301 | MS.gene96445:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 1.2:+22465719 | MS.gene96445:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.528157 | 1.2:+22464662 | MS.gene96445:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 1.2:+22465854 | MS.gene96445:CDS |
| AATGCCCCGTACTAATAAGT+TGG | 0.529713 | 1.2:+22464590 | MS.gene96445:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 1.2:+22465833 | MS.gene96445:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 1.2:-22466676 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 1.2:+22466278 | MS.gene96445:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 1.2:+22469402 | MS.gene96445:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 1.2:-22465322 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 1.2:+22467777 | MS.gene96445:CDS |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 1.2:+22464928 | MS.gene96445:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.543023 | 1.2:+22465667 | MS.gene96445:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 1.2:+22467544 | MS.gene96445:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 1.2:+22465693 | MS.gene96445:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 1.2:+22465633 | MS.gene96445:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 1.2:-22467293 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 1.2:-22464573 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 1.2:+22465764 | MS.gene96445:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 1.2:+22464842 | MS.gene96445:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 1.2:+22464722 | MS.gene96445:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 1.2:+22465751 | MS.gene96445:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 1.2:+22465682 | MS.gene96445:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 1.2:-22465685 | None:intergenic |
| TCAAGATGTATATGCCTCGT+TGG | 0.564996 | 1.2:+22466652 | MS.gene96445:CDS |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 1.2:+22465723 | MS.gene96445:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 1.2:+22465928 | MS.gene96445:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 1.2:-22467505 | None:intergenic |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 1.2:+22467290 | MS.gene96445:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 1.2:+22466436 | MS.gene96445:CDS |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 1.2:-22465697 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 1.2:+22465637 | MS.gene96445:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 1.2:+22466246 | MS.gene96445:CDS |
| AGTAGCTTGGGATTTAGAGT+AGG | 0.584499 | 1.2:+22464750 | MS.gene96445:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 1.2:-22465345 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 1.2:-22465755 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 1.2:+22465991 | MS.gene96445:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 1.2:+22464718 | MS.gene96445:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 1.2:+22466616 | MS.gene96445:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 1.2:+22465112 | MS.gene96445:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 1.2:+22465946 | MS.gene96445:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 1.2:+22464914 | MS.gene96445:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 1.2:+22465354 | MS.gene96445:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 1.2:+22465855 | MS.gene96445:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 1.2:-22467289 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 1.2:+22466279 | MS.gene96445:CDS |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 1.2:-22469405 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 1.2:+22466600 | MS.gene96445:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 1.2:+22465350 | MS.gene96445:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 1.2:-22465187 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 1.2:+22465889 | MS.gene96445:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 1.2:+22467306 | MS.gene96445:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 1.2:+22467320 | MS.gene96445:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 1.2:+22464764 | MS.gene96445:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 1.2:+22465758 | MS.gene96445:CDS |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 1.2:+22465779 | MS.gene96445:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 1.2:+22465921 | MS.gene96445:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 1.2:+22466676 | MS.gene96445:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 1.2:+22465529 | MS.gene96445:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 1.2:+22467748 | MS.gene96445:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 1.2:+22465832 | MS.gene96445:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 1.2:+22467390 | MS.gene96445:CDS |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 1.2:+22465281 | MS.gene96445:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 1.2:-22469317 | None:intergenic |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 1.2:+22464929 | MS.gene96445:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 1.2:+22467733 | MS.gene96445:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 1.2:+22465947 | MS.gene96445:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 1.2:+22465881 | MS.gene96445:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 1.2:-22467383 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 1.2:-22464991 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 1.2:+22467368 | MS.gene96445:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 1.2:+22465816 | MS.gene96445:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 1.2:+22465829 | MS.gene96445:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 1.2:+22465357 | MS.gene96445:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 1.2:-22464803 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 1.2:+22465765 | MS.gene96445:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 1.2:+22466668 | MS.gene96445:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 1.2:+22465306 | MS.gene96445:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 1.2:+22465068 | MS.gene96445:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 1.2:-22469406 | None:intergenic |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 1.2:-22464666 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 1.2:-22467306 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 1.2:+22466625 | MS.gene96445:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 1.2:-22466666 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 1.2:+22469389 | MS.gene96445:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 1.2:+22467749 | MS.gene96445:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 1.2:+22465805 | MS.gene96445:CDS |
| TCTACCAACTTATTAGTACG+GGG | 0.745691 | 1.2:-22464594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | - | chr1.2:22466334-22466353 | None:intergenic | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | + | chr1.2:22469241-22469260 | MS.gene96445:intron | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | + | chr1.2:22469240-22469259 | MS.gene96445:intron | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | - | chr1.2:22468044-22468063 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | + | chr1.2:22469024-22469043 | MS.gene96445:intron | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | - | chr1.2:22468541-22468560 | None:intergenic | 10.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | - | chr1.2:22466376-22466395 | None:intergenic | 15.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | - | chr1.2:22466327-22466346 | None:intergenic | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | + | chr1.2:22469242-22469261 | MS.gene96445:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | + | chr1.2:22467420-22467439 | MS.gene96445:intron | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | + | chr1.2:22466474-22466493 | MS.gene96445:CDS | 15.0% |
| !! | AATAACTCACTAGAATATAT+GGG | + | chr1.2:22468184-22468203 | MS.gene96445:intron | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | - | chr1.2:22466560-22466579 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | - | chr1.2:22466565-22466584 | None:intergenic | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | - | chr1.2:22468370-22468389 | None:intergenic | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | - | chr1.2:22467188-22467207 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | + | chr1.2:22469150-22469169 | MS.gene96445:intron | 20.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | - | chr1.2:22465014-22465033 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | + | chr1.2:22466569-22466588 | MS.gene96445:intron | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | - | chr1.2:22466559-22466578 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | - | chr1.2:22468466-22468485 | None:intergenic | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | + | chr1.2:22468212-22468231 | MS.gene96445:intron | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | - | chr1.2:22469150-22469169 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | + | chr1.2:22465277-22465296 | MS.gene96445:intron | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | + | chr1.2:22468581-22468600 | MS.gene96445:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | + | chr1.2:22465278-22465297 | MS.gene96445:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | + | chr1.2:22466384-22466403 | MS.gene96445:intron | 20.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | - | chr1.2:22467147-22467166 | None:intergenic | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | - | chr1.2:22467146-22467165 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | - | chr1.2:22468463-22468482 | None:intergenic | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | - | chr1.2:22465195-22465214 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | + | chr1.2:22464704-22464723 | MS.gene96445:CDS | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | + | chr1.2:22467995-22468014 | MS.gene96445:intron | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | + | chr1.2:22465112-22465131 | MS.gene96445:CDS | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | - | chr1.2:22465500-22465519 | None:intergenic | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | + | chr1.2:22465496-22465515 | MS.gene96445:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | + | chr1.2:22465433-22465452 | MS.gene96445:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | - | chr1.2:22466857-22466876 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | + | chr1.2:22466901-22466920 | MS.gene96445:intron | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | + | chr1.2:22468921-22468940 | MS.gene96445:intron | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | + | chr1.2:22467594-22467613 | MS.gene96445:CDS | 25.0% |
| ! | CAACAGTATTCATTCATTAA+TGG | - | chr1.2:22464544-22464563 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | + | chr1.2:22468491-22468510 | MS.gene96445:intron | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | - | chr1.2:22468129-22468148 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | - | chr1.2:22468371-22468390 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | + | chr1.2:22469149-22469168 | MS.gene96445:intron | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | + | chr1.2:22468183-22468202 | MS.gene96445:intron | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | + | chr1.2:22468083-22468102 | MS.gene96445:intron | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | + | chr1.2:22465712-22465731 | MS.gene96445:CDS | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | - | chr1.2:22469009-22469028 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | + | chr1.2:22465432-22465451 | MS.gene96445:intron | 25.0% |
| ! | TATCTACCAACTTATTAGTA+CGG | - | chr1.2:22464599-22464618 | None:intergenic | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | + | chr1.2:22464718-22464737 | MS.gene96445:CDS | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | + | chr1.2:22466976-22466995 | MS.gene96445:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | + | chr1.2:22468082-22468101 | MS.gene96445:intron | 25.0% |
| ! | TGATATATTACTTGTGTGTA+AGG | + | chr1.2:22467649-22467668 | MS.gene96445:intron | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | - | chr1.2:22468869-22468888 | None:intergenic | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | + | chr1.2:22465719-22465738 | MS.gene96445:CDS | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | - | chr1.2:22465431-22465450 | None:intergenic | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | + | chr1.2:22465425-22465444 | MS.gene96445:intron | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | - | chr1.2:22468870-22468889 | None:intergenic | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | - | chr1.2:22468411-22468430 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | + | chr1.2:22468369-22468388 | MS.gene96445:intron | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | + | chr1.2:22468605-22468624 | MS.gene96445:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | - | chr1.2:22467975-22467994 | None:intergenic | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | - | chr1.2:22468322-22468341 | None:intergenic | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | - | chr1.2:22468321-22468340 | None:intergenic | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | + | chr1.2:22468160-22468179 | MS.gene96445:intron | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | - | chr1.2:22469151-22469170 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | + | chr1.2:22468126-22468145 | MS.gene96445:intron | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | + | chr1.2:22468127-22468146 | MS.gene96445:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | + | chr1.2:22465199-22465218 | MS.gene96445:intron | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | - | chr1.2:22468857-22468876 | None:intergenic | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | + | chr1.2:22465198-22465217 | MS.gene96445:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | + | chr1.2:22466222-22466241 | MS.gene96445:intron | 25.0% |
| AAAGTGTAGTAAGATTGATG+CGG | + | chr1.2:22465805-22465824 | MS.gene96445:CDS | 30.0% | |
| AACAAAACTCGCAAAATTAG+GGG | - | chr1.2:22467145-22467164 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | + | chr1.2:22469287-22469306 | MS.gene96445:intron | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | + | chr1.2:22464690-22464709 | MS.gene96445:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | - | chr1.2:22467788-22467807 | None:intergenic | 30.0% | |
| AAGCTTGCACATCAAAAAAA+GGG | - | chr1.2:22465616-22465635 | None:intergenic | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | - | chr1.2:22468359-22468378 | None:intergenic | 30.0% | |
| AATAAAGGAGCGAACAATAA+AGG | + | chr1.2:22467533-22467552 | MS.gene96445:CDS | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | - | chr1.2:22468992-22469011 | None:intergenic | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | - | chr1.2:22464790-22464809 | None:intergenic | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | - | chr1.2:22469195-22469214 | None:intergenic | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | + | chr1.2:22467556-22467575 | MS.gene96445:CDS | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | - | chr1.2:22468957-22468976 | None:intergenic | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | - | chr1.2:22464697-22464716 | None:intergenic | 30.0% | |
| AGTCATCATTATGATGTTGT+AGG | + | chr1.2:22466733-22466752 | MS.gene96445:intron | 30.0% | |
| ATAGAAGTCCAAACTCAATT+GGG | - | chr1.2:22468638-22468657 | None:intergenic | 30.0% | |
| ATATTCTAGTGAGTTATTCC+CGG | - | chr1.2:22468182-22468201 | None:intergenic | 30.0% | |
| ATCTACCAACTTATTAGTAC+GGG | - | chr1.2:22464598-22464617 | None:intergenic | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | + | chr1.2:22465986-22466005 | MS.gene96445:CDS | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | + | chr1.2:22467889-22467908 | MS.gene96445:intron | 30.0% | |
| CCAGCAATATTAATAACCTA+AGG | - | chr1.2:22466403-22466422 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | + | chr1.2:22466400-22466419 | MS.gene96445:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | + | chr1.2:22465855-22465874 | MS.gene96445:CDS | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | + | chr1.2:22467544-22467563 | MS.gene96445:CDS | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | + | chr1.2:22468255-22468274 | MS.gene96445:intron | 30.0% | |
| GATACAGTTATACACATTTC+TGG | + | chr1.2:22465161-22465180 | MS.gene96445:CDS | 30.0% | |
| GATTCCAACATTTATATTCC+TGG | + | chr1.2:22468920-22468939 | MS.gene96445:intron | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | - | chr1.2:22467943-22467962 | None:intergenic | 30.0% | |
| GGAACAAAAAAAATATGCCT+TGG | + | chr1.2:22468284-22468303 | MS.gene96445:intron | 30.0% | |
| GGCTGAAAAGGAAAAAAAAA+AGG | + | chr1.2:22466033-22466052 | MS.gene96445:CDS | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | + | chr1.2:22465967-22465986 | MS.gene96445:CDS | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | - | chr1.2:22468956-22468975 | None:intergenic | 30.0% | |
| GGTATATGTTCTTAAGTACT+TGG | + | chr1.2:22467720-22467739 | MS.gene96445:CDS | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | + | chr1.2:22464791-22464810 | MS.gene96445:CDS | 30.0% | |
| TAAAGGTTGAATACACATCA+CGG | - | chr1.2:22466532-22466551 | None:intergenic | 30.0% | |
| TAACCTTCGCATTTGAAAAA+AGG | - | chr1.2:22465401-22465420 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | - | chr1.2:22465617-22465636 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | + | chr1.2:22469109-22469128 | MS.gene96445:intron | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | - | chr1.2:22464674-22464693 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | - | chr1.2:22467944-22467963 | None:intergenic | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | - | chr1.2:22469379-22469398 | None:intergenic | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | + | chr1.2:22465921-22465940 | MS.gene96445:CDS | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | + | chr1.2:22465987-22466006 | MS.gene96445:CDS | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | + | chr1.2:22465901-22465920 | MS.gene96445:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | - | chr1.2:22469288-22469307 | None:intergenic | 30.0% | |
| TGTGTAAGTTATTTGTTTCC+AGG | + | chr1.2:22469174-22469193 | MS.gene96445:intron | 30.0% | |
| TTATACACAGTAACACACAT+TGG | + | chr1.2:22469204-22469223 | MS.gene96445:intron | 30.0% | |
| TTATTCCTGTCAAATAGGAT+TGG | + | chr1.2:22468374-22468393 | MS.gene96445:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | + | chr1.2:22465920-22465939 | MS.gene96445:CDS | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | + | chr1.2:22466091-22466110 | MS.gene96445:intron | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | - | chr1.2:22468927-22468946 | None:intergenic | 30.0% | |
| ! | AAATTTTGCAGTCATGATTG+TGG | + | chr1.2:22467697-22467716 | MS.gene96445:intron | 30.0% |
| ! | AATGTTGGAATCTTATTTCC+AGG | - | chr1.2:22468912-22468931 | None:intergenic | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | + | chr1.2:22467698-22467717 | MS.gene96445:intron | 30.0% |
| ! | CTGTATCATTCTTTTGTTGA+TGG | - | chr1.2:22465148-22465167 | None:intergenic | 30.0% |
| ! | GATTTTCACAGAAATTTACC+TGG | - | chr1.2:22468412-22468431 | None:intergenic | 30.0% |
| ! | GTAGTGGAATTGATGAATAA+AGG | + | chr1.2:22467518-22467537 | MS.gene96445:CDS | 30.0% |
| ! | TTAATGTGATTAGTTGGTTG+AGG | + | chr1.2:22465502-22465521 | MS.gene96445:intron | 30.0% |
| ! | TTTTGATGTGCAAGCTTATA+TGG | + | chr1.2:22465619-22465638 | MS.gene96445:CDS | 30.0% |
| !! | ACTAACCAATTTTGTTGCTT+TGG | - | chr1.2:22467602-22467621 | None:intergenic | 30.0% |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | + | chr1.2:22468094-22468113 | MS.gene96445:intron | 30.0% |
| !! | TGAGGTAGTTGATGATTTAA+AGG | + | chr1.2:22466587-22466606 | MS.gene96445:CDS | 30.0% |
| !! | TGTCAGATTATTTTTCGGTA+CGG | + | chr1.2:22466479-22466498 | MS.gene96445:intron | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | + | chr1.2:22468161-22468180 | MS.gene96445:intron | 30.0% |
| !! | TTTATTTTCAAACGAGGGTT+GGG | - | chr1.2:22469145-22469164 | None:intergenic | 30.0% |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | + | chr1.2:22465395-22465414 | MS.gene96445:CDS | 30.0% |
| !!! | AACTACATTTTTTCATGTCG+CGG | + | chr1.2:22466153-22466172 | MS.gene96445:intron | 30.0% |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | + | chr1.2:22466921-22466940 | MS.gene96445:intron | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | + | chr1.2:22468891-22468910 | MS.gene96445:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | + | chr1.2:22467035-22467054 | MS.gene96445:intron | 30.0% |
| !!! | GACTTCTATGCATTGATTTT+GGG | + | chr1.2:22468649-22468668 | MS.gene96445:intron | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | + | chr1.2:22468125-22468144 | MS.gene96445:intron | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | - | chr1.2:22469146-22469165 | None:intergenic | 30.0% |
| AAGATTGATGCGGATAATGA+TGG | + | chr1.2:22465815-22465834 | MS.gene96445:CDS | 35.0% | |
| AAGTTGGATGATGAAGATGT+TGG | + | chr1.2:22465881-22465900 | MS.gene96445:CDS | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | + | chr1.2:22468994-22469013 | MS.gene96445:intron | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | - | chr1.2:22468240-22468259 | None:intergenic | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | + | chr1.2:22468794-22468813 | MS.gene96445:intron | 35.0% | |
| ACCAACTTGAGAATGGTTAA+CGG | - | chr1.2:22465576-22465595 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | + | chr1.2:22465066-22465085 | MS.gene96445:CDS | 35.0% | |
| ACTTTCCAATCCTATTTGAC+AGG | - | chr1.2:22468382-22468401 | None:intergenic | 35.0% | |
| AGAAGATAAAGACAATGGGA+TGG | + | chr1.2:22465991-22466010 | MS.gene96445:CDS | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | + | chr1.2:22465816-22465835 | MS.gene96445:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | - | chr1.2:22467787-22467806 | None:intergenic | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | + | chr1.2:22466753-22466772 | MS.gene96445:intron | 35.0% | |
| ATATAGGAGGTGATAAGCAT+TGG | - | chr1.2:22468450-22468469 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | - | chr1.2:22464669-22464688 | None:intergenic | 35.0% | |
| ATATCCTCATATCATCCTCA+AGG | - | chr1.2:22465700-22465719 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | + | chr1.2:22468262-22468281 | MS.gene96445:intron | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | + | chr1.2:22469110-22469129 | MS.gene96445:intron | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | + | chr1.2:22468995-22469014 | MS.gene96445:intron | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | - | chr1.2:22467957-22467976 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | - | chr1.2:22468639-22468658 | None:intergenic | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | + | chr1.2:22466436-22466455 | MS.gene96445:CDS | 35.0% | |
| CATTAACAATTGGACCAAAG+TGG | + | chr1.2:22465350-22465369 | MS.gene96445:CDS | 35.0% | |
| CCTGGGTATAATTTATTCCA+AGG | - | chr1.2:22468304-22468323 | None:intergenic | 35.0% | |
| CCTTGGAATAAATTATACCC+AGG | + | chr1.2:22468301-22468320 | MS.gene96445:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | + | chr1.2:22465067-22465086 | MS.gene96445:CDS | 35.0% | |
| CGGAAAATATAACACACACA+AGG | - | chr1.2:22464994-22465013 | None:intergenic | 35.0% | |
| CTCTACCTAAAATTCCCTTT+AGG | + | chr1.2:22467000-22467019 | MS.gene96445:intron | 35.0% | |
| CTTATATGGCTGAACATCAA+AGG | + | chr1.2:22465633-22465652 | MS.gene96445:CDS | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | + | chr1.2:22464722-22464741 | MS.gene96445:CDS | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | - | chr1.2:22468360-22468379 | None:intergenic | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | - | chr1.2:22468993-22469012 | None:intergenic | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | + | chr1.2:22464446-22464465 | MS.gene96445:CDS | 35.0% | |
| GCAAAATTAGGGGTTACAAT+AGG | - | chr1.2:22467135-22467154 | None:intergenic | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | + | chr1.2:22465068-22465087 | MS.gene96445:CDS | 35.0% | |
| GGAAAAGCAGAAGAAAATGA+TGG | + | chr1.2:22465854-22465873 | MS.gene96445:CDS | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | + | chr1.2:22468220-22468239 | MS.gene96445:intron | 35.0% | |
| GGAAAGCAAATCTTTGTGTT+CGG | - | chr1.2:22465666-22465685 | None:intergenic | 35.0% | |
| GGGTTTGTGTTGTATTAGTT+CGG | + | chr1.2:22467055-22467074 | MS.gene96445:intron | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | + | chr1.2:22468698-22468717 | MS.gene96445:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | + | chr1.2:22465281-22465300 | MS.gene96445:intron | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | + | chr1.2:22464681-22464700 | MS.gene96445:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | + | chr1.2:22469046-22469065 | MS.gene96445:intron | 35.0% | |
| TAACTGCATTTACTTACAGG+AGG | + | chr1.2:22469290-22469309 | MS.gene96445:intron | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | - | chr1.2:22468241-22468260 | None:intergenic | 35.0% | |
| TAGAAGTCCAAACTCAATTG+GGG | - | chr1.2:22468637-22468656 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | + | chr1.2:22467998-22468017 | MS.gene96445:intron | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | + | chr1.2:22464914-22464933 | MS.gene96445:CDS | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | + | chr1.2:22468263-22468282 | MS.gene96445:intron | 35.0% | |
| TATGTTGGAATCTTCTTTGG+AGG | + | chr1.2:22467559-22467578 | MS.gene96445:CDS | 35.0% | |
| TATTCTAGTGAGTTATTCCC+GGG | - | chr1.2:22468181-22468200 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | - | chr1.2:22468624-22468643 | None:intergenic | 35.0% | |
| TCTACCAACTTATTAGTACG+GGG | - | chr1.2:22464597-22464616 | None:intergenic | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | + | chr1.2:22467729-22467748 | MS.gene96445:CDS | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | + | chr1.2:22464721-22464740 | MS.gene96445:CDS | 35.0% | |
| TGAGGGAAAACAAACGAAAA+AGG | + | chr1.2:22464445-22464464 | MS.gene96445:CDS | 35.0% | |
| TGATGCCATAAAAAATTCCC+AGG | + | chr1.2:22468849-22468868 | MS.gene96445:intron | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | - | chr1.2:22466549-22466568 | None:intergenic | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | + | chr1.2:22469047-22469066 | MS.gene96445:intron | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | - | chr1.2:22469409-22469428 | None:intergenic | 35.0% | |
| TTACACATCCCTTTCCATAT+TGG | - | chr1.2:22468682-22468701 | None:intergenic | 35.0% | |
| TTCTTAAGTACTTGGAGTTG+TGG | + | chr1.2:22467728-22467747 | MS.gene96445:CDS | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | + | chr1.2:22467059-22467078 | MS.gene96445:intron | 35.0% | |
| TTTACCGGAAACTAGTGATA+GGG | + | chr1.2:22464842-22464861 | MS.gene96445:CDS | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | + | chr1.2:22467058-22467077 | MS.gene96445:intron | 35.0% | |
| ! | AACACAAAGATTTGCTTTCC+CGG | + | chr1.2:22465666-22465685 | MS.gene96445:CDS | 35.0% |
| ! | AGAAAATGATGGGATGAAGT+TGG | + | chr1.2:22465865-22465884 | MS.gene96445:CDS | 35.0% |
| ! | ATTTTGCAGTCATGATTGTG+GGG | + | chr1.2:22467699-22467718 | MS.gene96445:intron | 35.0% |
| ! | GAATTTTCCCCAATTGAGTT+TGG | + | chr1.2:22468627-22468646 | MS.gene96445:intron | 35.0% |
| ! | GTTTTCCACGCATTAACAAT+TGG | + | chr1.2:22465340-22465359 | MS.gene96445:CDS | 35.0% |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | + | chr1.2:22467088-22467107 | MS.gene96445:intron | 35.0% |
| ! | TGATGATGATATGGCTGAAA+AGG | + | chr1.2:22466021-22466040 | MS.gene96445:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | + | chr1.2:22466783-22466802 | MS.gene96445:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | + | chr1.2:22467494-22467513 | MS.gene96445:intron | 35.0% |
| ! | TTATTTTCAAACGAGGGTTG+GGG | - | chr1.2:22469144-22469163 | None:intergenic | 35.0% |
| ! | TTGTCTAGAATGTTGATGAG+TGG | + | chr1.2:22466782-22466801 | MS.gene96445:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | + | chr1.2:22467089-22467108 | MS.gene96445:intron | 35.0% |
| !! | AAATGTCGATGGTATTGACA+GGG | + | chr1.2:22468805-22468824 | MS.gene96445:intron | 35.0% |
| !! | AACCATTCTCAAGTTGGTAT+TGG | + | chr1.2:22465578-22465597 | MS.gene96445:CDS | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | + | chr1.2:22465947-22465966 | MS.gene96445:CDS | 35.0% |
| !! | AGAAAATGATGATGGGATGA+AGG | + | chr1.2:22465928-22465947 | MS.gene96445:CDS | 35.0% |
| !! | TAATGATGGGTTGAAAAGTG+AGG | + | chr1.2:22465829-22465848 | MS.gene96445:CDS | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | + | chr1.2:22467495-22467514 | MS.gene96445:intron | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | + | chr1.2:22464827-22464846 | MS.gene96445:CDS | 35.0% |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | + | chr1.2:22468097-22468116 | MS.gene96445:intron | 35.0% |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | - | chr1.2:22465536-22465555 | None:intergenic | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | + | chr1.2:22466154-22466173 | MS.gene96445:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | + | chr1.2:22468656-22468675 | MS.gene96445:intron | 35.0% |
| !!! | CGAATTTGTTTTATGCAACG+TGG | + | chr1.2:22467230-22467249 | MS.gene96445:intron | 35.0% |
| !!! | GATTGGAAAGTTTTATTCCC+AGG | + | chr1.2:22468391-22468410 | MS.gene96445:intron | 35.0% |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | + | chr1.2:22467034-22467053 | MS.gene96445:intron | 35.0% |
| !!! | GGACTTCTATGCATTGATTT+TGG | + | chr1.2:22468648-22468667 | MS.gene96445:intron | 35.0% |
| AAAACGCTTAATTGGACCAC+TGG | - | chr1.2:22465325-22465344 | None:intergenic | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | + | chr1.2:22468229-22468248 | MS.gene96445:intron | 40.0% | |
| AACAAACGCACCCTAAATGT+TGG | + | chr1.2:22468979-22468998 | MS.gene96445:intron | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | + | chr1.2:22465354-22465373 | MS.gene96445:CDS | 40.0% | |
| AACAGCAACACCCCAATTAT+AGG | - | chr1.2:22465081-22465100 | None:intergenic | 40.0% | |
| AAGAAAACAGGCAGTGATGA+AGG | - | chr1.2:22466845-22466864 | None:intergenic | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | + | chr1.2:22465723-22465742 | MS.gene96445:CDS | 40.0% | |
| AATGCCCCGTACTAATAAGT+TGG | + | chr1.2:22464590-22464609 | MS.gene96445:CDS | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | + | chr1.2:22468980-22468999 | MS.gene96445:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | + | chr1.2:22467368-22467387 | MS.gene96445:CDS | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | + | chr1.2:22469301-22469320 | MS.gene96445:intron | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | + | chr1.2:22465724-22465743 | MS.gene96445:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | + | chr1.2:22468776-22468795 | MS.gene96445:intron | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | + | chr1.2:22469402-22469421 | MS.gene96445:CDS | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | - | chr1.2:22465333-22465352 | None:intergenic | 40.0% | |
| ATTCCACTACCCCTTCAAAA+CGG | - | chr1.2:22467508-22467527 | None:intergenic | 40.0% | |
| CAATCCTTGAGGATGATATG+AGG | + | chr1.2:22465693-22465712 | MS.gene96445:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | + | chr1.2:22469329-22469348 | MS.gene96445:CDS | 40.0% | |
| CATACATTGTCCTCTTCCTA+TGG | - | chr1.2:22467333-22467352 | None:intergenic | 40.0% | |
| CGAAAAAGGGATTGTGTTGT+TGG | + | chr1.2:22464459-22464478 | MS.gene96445:CDS | 40.0% | |
| CTAAAATTCCCTTTAGGCAG+TGG | + | chr1.2:22467006-22467025 | MS.gene96445:intron | 40.0% | |
| CTCAGGAAGGATTAGAGTTT+AGG | + | chr1.2:22468761-22468780 | MS.gene96445:intron | 40.0% | |
| CTCCAATACCAACTTGAGAA+TGG | - | chr1.2:22465583-22465602 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | + | chr1.2:22465306-22465325 | MS.gene96445:CDS | 40.0% | |
| GCAAACCTAAAGCCAAACAA+AGG | - | chr1.2:22464806-22464825 | None:intergenic | 40.0% | |
| GCTGTATATTTAGGGAATGC+AGG | - | chr1.2:22467935-22467954 | None:intergenic | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | - | chr1.2:22469123-22469142 | None:intergenic | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | - | chr1.2:22464576-22464595 | None:intergenic | 40.0% | |
| GGTAAACACTCTCCTACAAT+AGG | - | chr1.2:22464828-22464847 | None:intergenic | 40.0% | |
| GTATATTTAGGGAATGCAGG+AGG | - | chr1.2:22467932-22467951 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | + | chr1.2:22464841-22464860 | MS.gene96445:CDS | 40.0% | |
| TAAAGACAATGGGATGGAGT+TGG | + | chr1.2:22465997-22466016 | MS.gene96445:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | - | chr1.2:22469408-22469427 | None:intergenic | 40.0% | |
| TATATGGGTGCGTTTGTTTG+AGG | + | chr1.2:22468199-22468218 | MS.gene96445:intron | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | + | chr1.2:22465637-22465656 | MS.gene96445:CDS | 40.0% | |
| TCAAGATGTATATGCCTCGT+TGG | + | chr1.2:22466652-22466671 | MS.gene96445:CDS | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | - | chr1.2:22468270-22468289 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | - | chr1.2:22465348-22465367 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | - | chr1.2:22464626-22464645 | None:intergenic | 40.0% | |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | - | chr1.2:22468754-22468773 | None:intergenic | 40.0% |
| ! | ACACAAAGATTTGCTTTCCC+GGG | + | chr1.2:22465667-22465686 | MS.gene96445:CDS | 40.0% |
| ! | AGTAGCTTGGGATTTAGAGT+AGG | + | chr1.2:22464750-22464769 | MS.gene96445:CDS | 40.0% |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | + | chr1.2:22467568-22467587 | MS.gene96445:CDS | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | - | chr1.2:22468977-22468996 | None:intergenic | 40.0% |
| ! | CACTGCCTAAAGGGAATTTT+AGG | - | chr1.2:22467008-22467027 | None:intergenic | 40.0% |
| ! | CTAACCCTATCACTAGTTTC+CGG | - | chr1.2:22464849-22464868 | None:intergenic | 40.0% |
| ! | CTTAATTGGACCACTGGTTA+GGG | - | chr1.2:22465319-22465338 | None:intergenic | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | + | chr1.2:22468671-22468690 | MS.gene96445:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | + | chr1.2:22466600-22466619 | MS.gene96445:CDS | 40.0% |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | + | chr1.2:22464813-22464832 | MS.gene96445:CDS | 40.0% |
| ! | GGAGTTGGATGATGATGATA+TGG | + | chr1.2:22466012-22466031 | MS.gene96445:CDS | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | + | chr1.2:22466267-22466286 | MS.gene96445:CDS | 40.0% |
| ! | TGATGAAGATGTTGGTGAAG+AGG | + | chr1.2:22465889-22465908 | MS.gene96445:CDS | 40.0% |
| ! | TGATTAGTTGGTTGAGGACT+TGG | + | chr1.2:22465508-22465527 | MS.gene96445:intron | 40.0% |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | + | chr1.2:22467060-22467079 | MS.gene96445:intron | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | - | chr1.2:22468976-22468995 | None:intergenic | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | + | chr1.2:22468806-22468825 | MS.gene96445:intron | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | + | chr1.2:22464798-22464817 | MS.gene96445:CDS | 40.0% |
| !! | GAAATGTCGATGGTATTGAC+AGG | + | chr1.2:22468804-22468823 | MS.gene96445:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | + | chr1.2:22465946-22465965 | MS.gene96445:CDS | 40.0% |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | + | chr1.2:22467496-22467515 | MS.gene96445:intron | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | + | chr1.2:22467090-22467109 | MS.gene96445:intron | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | + | chr1.2:22468665-22468684 | MS.gene96445:intron | 40.0% |
| AACATGACCTCCATCCACTT+TGG | - | chr1.2:22465367-22465386 | None:intergenic | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | + | chr1.2:22464662-22464681 | MS.gene96445:CDS | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | + | chr1.2:22464927-22464946 | MS.gene96445:CDS | 45.0% | |
| AAGTACTTGGAGTTGTGGGA+TGG | + | chr1.2:22467733-22467752 | MS.gene96445:CDS | 45.0% | |
| AATTGGACCAAAGTGGATGG+AGG | + | chr1.2:22465357-22465376 | MS.gene96445:CDS | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | - | chr1.2:22469068-22469087 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | + | chr1.2:22469389-22469408 | MS.gene96445:CDS | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | + | chr1.2:22464928-22464947 | MS.gene96445:CDS | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | + | chr1.2:22465764-22465783 | MS.gene96445:CDS | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | - | chr1.2:22465687-22465706 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | - | chr1.2:22467018-22467037 | None:intergenic | 45.0% | |
| ATGCCAAGTAGCATGGAAGT+AGG | + | chr1.2:22465758-22465777 | MS.gene96445:CDS | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | - | chr1.2:22467386-22467405 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | - | chr1.2:22469320-22469339 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | - | chr1.2:22465688-22465707 | None:intergenic | 45.0% | |
| CATGCATTGGAAAAACTCCC+CGG | - | chr1.2:22466266-22466285 | None:intergenic | 45.0% | |
| CATGTTACGTGTTGGACCAT+AGG | + | chr1.2:22467314-22467333 | MS.gene96445:CDS | 45.0% | |
| CATTGGAGTTTACGTCCTTC+AGG | - | chr1.2:22466618-22466637 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | + | chr1.2:22466616-22466635 | MS.gene96445:CDS | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | - | chr1.2:22465764-22465783 | None:intergenic | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | + | chr1.2:22467336-22467355 | MS.gene96445:CDS | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | + | chr1.2:22467777-22467796 | MS.gene96445:CDS | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | + | chr1.2:22467390-22467409 | MS.gene96445:CDS | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | + | chr1.2:22465572-22465591 | MS.gene96445:CDS | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | + | chr1.2:22465779-22465798 | MS.gene96445:CDS | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | + | chr1.2:22465529-22465548 | MS.gene96445:CDS | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | + | chr1.2:22465765-22465784 | MS.gene96445:CDS | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | + | chr1.2:22467747-22467766 | MS.gene96445:CDS | 45.0% | |
| TAATCCCTGCTAGACAAACC+AGG | - | chr1.2:22468719-22468738 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | + | chr1.2:22465751-22465770 | MS.gene96445:CDS | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | - | chr1.2:22465190-22465209 | None:intergenic | 45.0% | |
| TGAATTTCCGCTCAGTCCAT+TGG | - | chr1.2:22466635-22466654 | None:intergenic | 45.0% | |
| TGCCAAATCCACTGCCTAAA+GGG | - | chr1.2:22467017-22467036 | None:intergenic | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | + | chr1.2:22467748-22467767 | MS.gene96445:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | + | chr1.2:22467746-22467765 | MS.gene96445:CDS | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | - | chr1.2:22465191-22465210 | None:intergenic | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | - | chr1.2:22465758-22465777 | None:intergenic | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | + | chr1.2:22468712-22468731 | MS.gene96445:intron | 45.0% |
| ! | GCTTAATTGGACCACTGGTT+AGG | - | chr1.2:22465320-22465339 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | + | chr1.2:22468670-22468689 | MS.gene96445:intron | 45.0% |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | + | chr1.2:22467061-22467080 | MS.gene96445:intron | 45.0% |
| ! | TGGGATTTAGAGTAGGCGTT+AGG | + | chr1.2:22464757-22464776 | MS.gene96445:CDS | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | + | chr1.2:22467062-22467081 | MS.gene96445:intron | 45.0% |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | + | chr1.2:22467012-22467031 | MS.gene96445:intron | 45.0% |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | + | chr1.2:22467571-22467590 | MS.gene96445:CDS | 45.0% |
| ! | TTTTCCAATGCATGAAGGCG+AGG | + | chr1.2:22466272-22466291 | MS.gene96445:CDS | 45.0% |
| !! | GTAAACTCCAATGGACTGAG+CGG | + | chr1.2:22466625-22466644 | MS.gene96445:CDS | 45.0% |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | + | chr1.2:22465832-22465851 | MS.gene96445:CDS | 45.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | - | chr1.2:22467683-22467702 | None:intergenic | 5.0% |
| !!! | TAAATTTTATCATTAAAATT+AGG | + | chr1.2:22467258-22467277 | MS.gene96445:intron | 5.0% |
| AAATGCCTCAAGGCAGCGTT+TGG | + | chr1.2:22467378-22467397 | MS.gene96445:CDS | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | + | chr1.2:22466278-22466297 | MS.gene96445:CDS | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | + | chr1.2:22467320-22467339 | MS.gene96445:CDS | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | - | chr1.2:22466279-22466298 | None:intergenic | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+GGG | + | chr1.2:22464738-22464757 | MS.gene96445:CDS | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | + | chr1.2:22466279-22466298 | MS.gene96445:CDS | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | - | chr1.2:22467297-22467316 | None:intergenic | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | - | chr1.2:22469067-22469086 | None:intergenic | 50.0% | |
| CATTCCCGGGACTTAGTTGT+AGG | + | chr1.2:22469060-22469079 | MS.gene96445:intron | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | - | chr1.2:22467309-22467328 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | + | chr1.2:22467306-22467325 | MS.gene96445:CDS | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | - | chr1.2:22464941-22464960 | None:intergenic | 50.0% | |
| GCAAAACGTGGGTCAAACGT+CGG | - | chr1.2:22468348-22468367 | None:intergenic | 50.0% | |
| GCGGGGTTTACGCTTATGTT+TGG | + | chr1.2:22467107-22467126 | MS.gene96445:intron | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | + | chr1.2:22464929-22464948 | MS.gene96445:CDS | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | + | chr1.2:22469067-22469086 | MS.gene96445:intron | 50.0% | |
| GGGATGGTGAAGCAAAATGG+GGG | + | chr1.2:22467749-22467768 | MS.gene96445:CDS | 50.0% | |
| GTAGATGAGTTGCGTGTTGC+CGG | + | chr1.2:22466244-22466263 | MS.gene96445:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | + | chr1.2:22464764-22464783 | MS.gene96445:CDS | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | + | chr1.2:22466245-22466264 | MS.gene96445:CDS | 50.0% | |
| TAGGTGGGATGCAAGTAGCT+TGG | + | chr1.2:22464737-22464756 | MS.gene96445:CDS | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | - | chr1.2:22467172-22467191 | None:intergenic | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | - | chr1.2:22466669-22466688 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | + | chr1.2:22466668-22466687 | MS.gene96445:CDS | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | - | chr1.2:22467296-22467315 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | + | chr1.2:22465682-22465701 | MS.gene96445:CDS | 50.0% | |
| TTCCTGGGAAAGCTAATCCC+AGG | + | chr1.2:22468936-22468955 | MS.gene96445:intron | 50.0% | |
| ! | ACACCGACTAGAACTCAGGA+AGG | + | chr1.2:22468748-22468767 | MS.gene96445:intron | 50.0% |
| ! | AGGCAGTGGATTTGGCATTG+TGG | + | chr1.2:22467020-22467039 | MS.gene96445:intron | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | + | chr1.2:22468744-22468763 | MS.gene96445:intron | 50.0% |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | + | chr1.2:22468711-22468730 | MS.gene96445:intron | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | + | chr1.2:22468233-22468252 | MS.gene96445:intron | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | - | chr1.2:22468749-22468768 | None:intergenic | 50.0% |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | + | chr1.2:22465833-22465852 | MS.gene96445:CDS | 50.0% |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | + | chr1.2:22468115-22468134 | MS.gene96445:intron | 50.0% |
| !! | TACCTGGGATTAGCTTTCCC+AGG | - | chr1.2:22468941-22468960 | None:intergenic | 50.0% |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | + | chr1.2:22467502-22467521 | MS.gene96445:CDS | 50.0% |
| AGATGAGTTGCGTGTTGCCG+GGG | + | chr1.2:22466246-22466265 | MS.gene96445:CDS | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | + | chr1.2:22467290-22467309 | MS.gene96445:CDS | 55.0% | |
| CAGTGGTCTTCGAACTGGGT+TGG | - | chr1.2:22467292-22467311 | None:intergenic | 55.0% | |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | + | chr1.2:22467066-22467085 | MS.gene96445:intron | 55.0% |
| !! | CCAAGACACTTGAGGCGTTG+CGG | + | chr1.2:22466676-22466695 | MS.gene96445:CDS | 55.0% |
| CCGCAACGCCTCAAGTGTCT+TGG | - | chr1.2:22466679-22466698 | None:intergenic | 60.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | + | chr1.2:22465181-22465200 | MS.gene96445:CDS | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | + | chr1.2:22467076-22467095 | MS.gene96445:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 22464444 | 22469428 | 22464444 | ID=MS.gene96445 |
| chr1.2 | mRNA | 22464444 | 22469428 | 22464444 | ID=MS.gene96445.t1;Parent=MS.gene96445 |
| chr1.2 | exon | 22464444 | 22464482 | 22464444 | ID=MS.gene96445.t1.exon1;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22464444 | 22464482 | 22464444 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22464573 | 22465202 | 22464573 | ID=MS.gene96445.t1.exon2;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22464573 | 22465202 | 22464573 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22465294 | 22465416 | 22465294 | ID=MS.gene96445.t1.exon3;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22465294 | 22465416 | 22465294 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22465515 | 22466062 | 22465515 | ID=MS.gene96445.t1.exon4;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22465515 | 22466062 | 22465515 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22466231 | 22466312 | 22466231 | ID=MS.gene96445.t1.exon5;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22466231 | 22466312 | 22466231 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22466406 | 22466495 | 22466406 | ID=MS.gene96445.t1.exon6;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22466406 | 22466495 | 22466406 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22466585 | 22466710 | 22466585 | ID=MS.gene96445.t1.exon7;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22466585 | 22466710 | 22466585 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22467280 | 22467411 | 22467280 | ID=MS.gene96445.t1.exon8;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22467280 | 22467411 | 22467280 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22467500 | 22467615 | 22467500 | ID=MS.gene96445.t1.exon9;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22467500 | 22467615 | 22467500 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22467708 | 22467798 | 22467708 | ID=MS.gene96445.t1.exon10;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22467708 | 22467798 | 22467708 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| chr1.2 | exon | 22469309 | 22469428 | 22469309 | ID=MS.gene96445.t1.exon11;Parent=MS.gene96445.t1 |
| chr1.2 | CDS | 22469309 | 22469428 | 22469309 | ID=cds.MS.gene96445.t1;Parent=MS.gene96445.t1 |
| Gene Sequence |
| Protein sequence |
