Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96746.t1 | XP_003591056.1 | 97.3 | 293 | 6 | 2 | 1 | 292 | 1 | 292 | 2.00E-162 | 581.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96746.t1 | Q9MAA2 | 72.2 | 270 | 75 | 0 | 3 | 272 | 7 | 276 | 9.8e-118 | 424.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96746.t1 | G7I7H1 | 97.3 | 293 | 6 | 2 | 1 | 292 | 1 | 292 | 1.4e-162 | 581.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050363 | MS.gene96746 | 0.825253 | 5.19E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96746.t1 | MTR_1g082360 | 97.270 | 293 | 6 | 2 | 1 | 292 | 1 | 292 | 0.0 | 586 |
| MS.gene96746.t1 | MTR_7g113920 | 70.877 | 285 | 80 | 1 | 2 | 286 | 34 | 315 | 3.99e-156 | 438 |
| MS.gene96746.t1 | MTR_5g010090 | 52.060 | 267 | 124 | 3 | 5 | 269 | 82 | 346 | 1.38e-93 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96746.t1 | AT3G05170 | 72.222 | 270 | 75 | 0 | 3 | 272 | 7 | 276 | 3.07e-150 | 423 |
| MS.gene96746.t1 | AT1G08940 | 68.953 | 277 | 80 | 3 | 3 | 275 | 7 | 281 | 4.19e-142 | 401 |
Find 80 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGTTTCACCTTCATTT+TGG | 0.169991 | 1.1:-60953023 | None:intergenic |
| TTTCGGAAACTGCGAGTTTC+GGG | 0.182047 | 1.1:+60952789 | MS.gene96746:CDS |
| CGCATTAGGATTATCCTCTT+TGG | 0.271933 | 1.1:-60952113 | None:intergenic |
| GACGCCGATCACGCGCTTCT+TGG | 0.272814 | 1.1:-60952360 | None:intergenic |
| TTTGAGCATCTAAACAATTT+CGG | 0.293790 | 1.1:+60952772 | MS.gene96746:CDS |
| AATCTCCGCCGTCTCGTTTC+CGG | 0.313382 | 1.1:+60952245 | MS.gene96746:CDS |
| ATTTCGGAAACTGCGAGTTT+CGG | 0.331893 | 1.1:+60952788 | MS.gene96746:CDS |
| CGCCGTCTCGTTTCCGGCCA+AGG | 0.340582 | 1.1:+60952251 | MS.gene96746:CDS |
| GAGATTGGCGCCGGCGTGGC+GGG | 0.342893 | 1.1:-60952228 | None:intergenic |
| AAGAAACTCGTGAACGGTTT+GGG | 0.344466 | 1.1:+60952453 | MS.gene96746:CDS |
| GTGACTCGCCGTGACGCATT+AGG | 0.355053 | 1.1:-60952127 | None:intergenic |
| AGAATCGCGCGTACGTGAAC+AGG | 0.355351 | 1.1:+60952388 | MS.gene96746:CDS |
| TGTGGACCGGGTGCGGGCGT+AGG | 0.374827 | 1.1:-60952312 | None:intergenic |
| TCGGCGGCGGATTCACCTTC+AGG | 0.382270 | 1.1:-60952494 | None:intergenic |
| CAATGTCCTTGGTATCTTGA+TGG | 0.384985 | 1.1:+60952952 | MS.gene96746:CDS |
| AAAGAAACTCGTGAACGGTT+TGG | 0.387033 | 1.1:+60952452 | MS.gene96746:CDS |
| GCCAGTCAGGGGAGCAGCCT+TGG | 0.397485 | 1.1:-60952268 | None:intergenic |
| ACCAGATTTAAATCGTTAGT+TGG | 0.398319 | 1.1:-60952682 | None:intergenic |
| GCCAAGGCTGCTCCCCTGAC+TGG | 0.403767 | 1.1:+60952267 | MS.gene96746:CDS |
| CACGGAGTGTGGACCGGGTG+CGG | 0.410340 | 1.1:-60952319 | None:intergenic |
| CGGAAGAAGAGATGCTTGAA+TGG | 0.421203 | 1.1:+60952860 | MS.gene96746:CDS |
| TAGAAGTAGAGACGCCAGTC+AGG | 0.422292 | 1.1:-60952281 | None:intergenic |
| GTGGACCGGGTGCGGGCGTA+GGG | 0.432905 | 1.1:-60952311 | None:intergenic |
| TCTTCATACGCTCTTGAACT+TGG | 0.436566 | 1.1:-60952424 | None:intergenic |
| GTCAGGGGAGCAGCCTTGGC+CGG | 0.437420 | 1.1:-60952264 | None:intergenic |
| TCCAACTAACGATTTAAATC+TGG | 0.438023 | 1.1:+60952681 | MS.gene96746:CDS |
| CGCGTACGTGAACAGGATTT+CGG | 0.438914 | 1.1:+60952395 | MS.gene96746:CDS |
| GGAAACGAGACGGCGGAGAT+TGG | 0.440959 | 1.1:-60952243 | None:intergenic |
| GGAAGAAGAGATGCTTGAAT+GGG | 0.451438 | 1.1:+60952861 | MS.gene96746:CDS |
| ACGGAGTGTGGACCGGGTGC+GGG | 0.458435 | 1.1:-60952318 | None:intergenic |
| GCTTGAATGGGGAATGTCTC+CGG | 0.465250 | 1.1:+60952873 | MS.gene96746:CDS |
| ATATGATTGCTGATCAGAAA+TGG | 0.466739 | 1.1:+60952896 | MS.gene96746:CDS |
| GGAGATTGGCGCCGGCGTGG+CGG | 0.473230 | 1.1:-60952229 | None:intergenic |
| TTCTGATCAGCAATCATATC+CGG | 0.479044 | 1.1:-60952892 | None:intergenic |
| AACTTCACGGAGTGTGGACC+GGG | 0.484362 | 1.1:-60952324 | None:intergenic |
| GTTAACTGAATGCTGTGGTC+TGG | 0.485756 | 1.1:-60952185 | None:intergenic |
| AAACTGCGAGTTTCGGGTGA+TGG | 0.492323 | 1.1:+60952795 | MS.gene96746:CDS |
| GTGGCGGGCTTGTGCGATGC+CGG | 0.494843 | 1.1:-60952213 | None:intergenic |
| AGCATTCAGTTAACTCCATC+CGG | 0.508794 | 1.1:+60952194 | MS.gene96746:CDS |
| CGGGTGATGGAGCAAGGGAG+TGG | 0.510953 | 1.1:+60952808 | MS.gene96746:CDS |
| CAGTTTGGCGATTAATCATA+CGG | 0.511425 | 1.1:+60952840 | MS.gene96746:CDS |
| ATCGCACAAGCCCGCCACGC+CGG | 0.513724 | 1.1:+60952218 | MS.gene96746:CDS |
| TTCTCCAAGAAGCGCGTGAT+CGG | 0.514170 | 1.1:+60952356 | MS.gene96746:CDS |
| CAACTTCACGGAGTGTGGAC+CGG | 0.516011 | 1.1:-60952325 | None:intergenic |
| CGGGCTTGTGCGATGCCGGA+TGG | 0.517406 | 1.1:-60952209 | None:intergenic |
| GGCGGAGATTGGCGCCGGCG+TGG | 0.518194 | 1.1:-60952232 | None:intergenic |
| TTTCTCCCTACGCCCGCACC+CGG | 0.532185 | 1.1:+60952306 | MS.gene96746:CDS |
| GATGAAGCAATCCAAAATGA+AGG | 0.532371 | 1.1:+60953012 | MS.gene96746:CDS |
| AATGCTGTGGTCTGGTGTGG+TGG | 0.541324 | 1.1:-60952177 | None:intergenic |
| GAGTTTCGGGTGATGGAGCA+AGG | 0.542115 | 1.1:+60952802 | MS.gene96746:CDS |
| GAGTGGTGGAGAATACAGTT+TGG | 0.544566 | 1.1:+60952825 | MS.gene96746:CDS |
| AGAAGTAGAGACGCCAGTCA+GGG | 0.558329 | 1.1:-60952280 | None:intergenic |
| GTGATGGAGCAAGGGAGTGG+TGG | 0.558690 | 1.1:+60952811 | MS.gene96746:CDS |
| TCTACCAACTTCACGGAGTG+TGG | 0.563838 | 1.1:-60952330 | None:intergenic |
| GAGACGGCGGAGATTGGCGC+CGG | 0.564282 | 1.1:-60952237 | None:intergenic |
| CTGAATGCTGTGGTCTGGTG+TGG | 0.565165 | 1.1:-60952180 | None:intergenic |
| TGATCATTCCAAGCACCTCT+AGG | 0.566827 | 1.1:-60952931 | None:intergenic |
| CAGATGCGCCTAGAGGTGCT+TGG | 0.570632 | 1.1:+60952923 | MS.gene96746:CDS |
| CTTGGAATGATCAATGTCCT+TGG | 0.578748 | 1.1:+60952941 | MS.gene96746:CDS |
| TCTTGATGAAGTGGTTCAAG+TGG | 0.585341 | 1.1:+60952737 | MS.gene96746:CDS |
| CGGTCCACACTCCGTGAAGT+TGG | 0.587452 | 1.1:+60952326 | MS.gene96746:CDS |
| TGGTGTATGCTGACGTGTCA+AGG | 0.588203 | 1.1:-60952157 | None:intergenic |
| ATGCGTCACGGCGAGTCACA+AGG | 0.594731 | 1.1:+60952131 | MS.gene96746:CDS |
| AGAAAGATCTACCAACTTCA+CGG | 0.598186 | 1.1:-60952337 | None:intergenic |
| AGCCTTGGCCGGAAACGAGA+CGG | 0.598321 | 1.1:-60952253 | None:intergenic |
| GAAGTAGAGACGCCAGTCAG+GGG | 0.613104 | 1.1:-60952279 | None:intergenic |
| GCGATCGAAAACATCGGCGG+CGG | 0.622403 | 1.1:-60952507 | None:intergenic |
| TTGTTAAAGAAACTCGTGAA+CGG | 0.625373 | 1.1:+60952447 | MS.gene96746:CDS |
| AAATGGGTGTGCTTCCAAAG+AGG | 0.650418 | 1.1:+60952099 | None:intergenic |
| AGTTTCGGGTGATGGAGCAA+GGG | 0.652564 | 1.1:+60952803 | MS.gene96746:CDS |
| TGGCGTGCAGATGCGCCTAG+AGG | 0.658589 | 1.1:+60952916 | MS.gene96746:CDS |
| GAAGAAGAGATGCTTGAATG+GGG | 0.659893 | 1.1:+60952862 | MS.gene96746:CDS |
| AGGATAATCCTAATGCGTCA+CGG | 0.674661 | 1.1:+60952119 | MS.gene96746:CDS |
| CTTGGCCGGAAACGAGACGG+CGG | 0.676638 | 1.1:-60952250 | None:intergenic |
| GATGAAGTGGTTCAAGTGGA+CGG | 0.691694 | 1.1:+60952741 | MS.gene96746:CDS |
| AGAAATGCGATCGAAAACAT+CGG | 0.698994 | 1.1:-60952513 | None:intergenic |
| ATGGAGTTAACTGAATGCTG+TGG | 0.708629 | 1.1:-60952190 | None:intergenic |
| AATCTGGTGATAGTATCACA+CGG | 0.716063 | 1.1:+60952697 | MS.gene96746:CDS |
| GAAGTGGTTCAAGTGGACGG+TGG | 0.719720 | 1.1:+60952744 | MS.gene96746:CDS |
| AATGCGATCGAAAACATCGG+CGG | 0.731619 | 1.1:-60952510 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTCAAAAAAACCTAAAT+AGG | - | chr1.1:60952623-60952642 | None:intergenic | 20.0% |
| !! | ATTTGAATTTCTTCCTATTT+AGG | + | chr1.1:60952607-60952626 | MS.gene96746:intron | 20.0% |
| !!! | TAGGTTTTTTTGAATCTTTA+TGG | + | chr1.1:60952626-60952645 | MS.gene96746:intron | 20.0% |
| ! | TTTGAGCATCTAAACAATTT+CGG | + | chr1.1:60952772-60952791 | MS.gene96746:CDS | 25.0% |
| AAAAAACCATCAAGATACCA+AGG | - | chr1.1:60952961-60952980 | None:intergenic | 30.0% | |
| ACCAGATTTAAATCGTTAGT+TGG | - | chr1.1:60952685-60952704 | None:intergenic | 30.0% | |
| ATATGATTGCTGATCAGAAA+TGG | + | chr1.1:60952896-60952915 | MS.gene96746:CDS | 30.0% | |
| TCCAACTAACGATTTAAATC+TGG | + | chr1.1:60952681-60952700 | MS.gene96746:CDS | 30.0% | |
| TCGATTAGAATGATTTCAGA+AGG | - | chr1.1:60952553-60952572 | None:intergenic | 30.0% | |
| TTGTTAAAGAAACTCGTGAA+CGG | + | chr1.1:60952447-60952466 | MS.gene96746:CDS | 30.0% | |
| ! | TTTCAGTTTCACCTTCATTT+TGG | - | chr1.1:60953026-60953045 | None:intergenic | 30.0% |
| AATCTGGTGATAGTATCACA+CGG | + | chr1.1:60952697-60952716 | MS.gene96746:CDS | 35.0% | |
| AGAAAGATCTACCAACTTCA+CGG | - | chr1.1:60952340-60952359 | None:intergenic | 35.0% | |
| AGAAATGCGATCGAAAACAT+CGG | - | chr1.1:60952516-60952535 | None:intergenic | 35.0% | |
| ATGATTTCAGAAGGAGAAAG+CGG | - | chr1.1:60952544-60952563 | None:intergenic | 35.0% | |
| CAGTTTGGCGATTAATCATA+CGG | + | chr1.1:60952840-60952859 | MS.gene96746:CDS | 35.0% | |
| GATGAAGCAATCCAAAATGA+AGG | + | chr1.1:60953012-60953031 | MS.gene96746:CDS | 35.0% | |
| TTCTGATCAGCAATCATATC+CGG | - | chr1.1:60952895-60952914 | None:intergenic | 35.0% | |
| ! | CACGAATTTTCTTGATGAAG+TGG | + | chr1.1:60952728-60952747 | MS.gene96746:CDS | 35.0% |
| ! | TTCTTTTATCGCTTTCCTGA+AGG | + | chr1.1:60952479-60952498 | MS.gene96746:CDS | 35.0% |
| AAAGAAACTCGTGAACGGTT+TGG | + | chr1.1:60952452-60952471 | MS.gene96746:CDS | 40.0% | |
| AAGAAACTCGTGAACGGTTT+GGG | + | chr1.1:60952453-60952472 | MS.gene96746:CDS | 40.0% | |
| AGCATTCAGTTAACTCCATC+CGG | + | chr1.1:60952194-60952213 | MS.gene96746:CDS | 40.0% | |
| AGGATAATCCTAATGCGTCA+CGG | + | chr1.1:60952119-60952138 | MS.gene96746:CDS | 40.0% | |
| ATGGAGTTAACTGAATGCTG+TGG | - | chr1.1:60952193-60952212 | None:intergenic | 40.0% | |
| ATTTCGGAAACTGCGAGTTT+CGG | + | chr1.1:60952788-60952807 | MS.gene96746:CDS | 40.0% | |
| CAATGTCCTTGGTATCTTGA+TGG | + | chr1.1:60952952-60952971 | MS.gene96746:CDS | 40.0% | |
| CGCATTAGGATTATCCTCTT+TGG | - | chr1.1:60952116-60952135 | None:intergenic | 40.0% | |
| CTTGGAATGATCAATGTCCT+TGG | + | chr1.1:60952941-60952960 | MS.gene96746:CDS | 40.0% | |
| GAAGAAGAGATGCTTGAATG+GGG | + | chr1.1:60952862-60952881 | MS.gene96746:CDS | 40.0% | |
| GGAAGAAGAGATGCTTGAAT+GGG | + | chr1.1:60952861-60952880 | MS.gene96746:CDS | 40.0% | |
| TCTTCATACGCTCTTGAACT+TGG | - | chr1.1:60952427-60952446 | None:intergenic | 40.0% | |
| TCTTGATGAAGTGGTTCAAG+TGG | + | chr1.1:60952737-60952756 | MS.gene96746:CDS | 40.0% | |
| ! | GATGTTTTCGATCGCATTTC+TGG | + | chr1.1:60952515-60952534 | MS.gene96746:CDS | 40.0% |
| AATGCGATCGAAAACATCGG+CGG | - | chr1.1:60952513-60952532 | None:intergenic | 45.0% | |
| CGGAAGAAGAGATGCTTGAA+TGG | + | chr1.1:60952860-60952879 | MS.gene96746:CDS | 45.0% | |
| GATGAAGTGGTTCAAGTGGA+CGG | + | chr1.1:60952741-60952760 | MS.gene96746:CDS | 45.0% | |
| GTTAACTGAATGCTGTGGTC+TGG | - | chr1.1:60952188-60952207 | None:intergenic | 45.0% | |
| TGATCATTCCAAGCACCTCT+AGG | - | chr1.1:60952934-60952953 | None:intergenic | 45.0% | |
| TTTCGGAAACTGCGAGTTTC+GGG | + | chr1.1:60952789-60952808 | MS.gene96746:CDS | 45.0% | |
| ! | GAGTGGTGGAGAATACAGTT+TGG | + | chr1.1:60952825-60952844 | MS.gene96746:CDS | 45.0% |
| AGAAGTAGAGACGCCAGTCA+GGG | - | chr1.1:60952283-60952302 | None:intergenic | 50.0% | |
| CGCGTACGTGAACAGGATTT+CGG | + | chr1.1:60952395-60952414 | MS.gene96746:CDS | 50.0% | |
| GCTTGAATGGGGAATGTCTC+CGG | + | chr1.1:60952873-60952892 | MS.gene96746:CDS | 50.0% | |
| TAGAAGTAGAGACGCCAGTC+AGG | - | chr1.1:60952284-60952303 | None:intergenic | 50.0% | |
| TCTACCAACTTCACGGAGTG+TGG | - | chr1.1:60952333-60952352 | None:intergenic | 50.0% | |
| TGGTGTATGCTGACGTGTCA+AGG | - | chr1.1:60952160-60952179 | None:intergenic | 50.0% | |
| ! | AAACTGCGAGTTTCGGGTGA+TGG | + | chr1.1:60952795-60952814 | MS.gene96746:CDS | 50.0% |
| ! | TTCTCCAAGAAGCGCGTGAT+CGG | + | chr1.1:60952356-60952375 | MS.gene96746:CDS | 50.0% |
| !! | AGTTTCGGGTGATGGAGCAA+GGG | + | chr1.1:60952803-60952822 | MS.gene96746:CDS | 50.0% |
| AACTTCACGGAGTGTGGACC+GGG | - | chr1.1:60952327-60952346 | None:intergenic | 55.0% | |
| AATCTCCGCCGTCTCGTTTC+CGG | + | chr1.1:60952245-60952264 | MS.gene96746:CDS | 55.0% | |
| AATGCTGTGGTCTGGTGTGG+TGG | - | chr1.1:60952180-60952199 | None:intergenic | 55.0% | |
| AGAATCGCGCGTACGTGAAC+AGG | + | chr1.1:60952388-60952407 | MS.gene96746:CDS | 55.0% | |
| CAACTTCACGGAGTGTGGAC+CGG | - | chr1.1:60952328-60952347 | None:intergenic | 55.0% | |
| CTGAATGCTGTGGTCTGGTG+TGG | - | chr1.1:60952183-60952202 | None:intergenic | 55.0% | |
| GAAGTAGAGACGCCAGTCAG+GGG | - | chr1.1:60952282-60952301 | None:intergenic | 55.0% | |
| GAAGTGGTTCAAGTGGACGG+TGG | + | chr1.1:60952744-60952763 | MS.gene96746:CDS | 55.0% | |
| !! | GAGTTTCGGGTGATGGAGCA+AGG | + | chr1.1:60952802-60952821 | MS.gene96746:CDS | 55.0% |
| AGCCTTGGCCGGAAACGAGA+CGG | - | chr1.1:60952256-60952275 | None:intergenic | 60.0% | |
| ATGCGTCACGGCGAGTCACA+AGG | + | chr1.1:60952131-60952150 | MS.gene96746:CDS | 60.0% | |
| CGGTCCACACTCCGTGAAGT+TGG | + | chr1.1:60952326-60952345 | MS.gene96746:CDS | 60.0% | |
| GCGATCGAAAACATCGGCGG+CGG | - | chr1.1:60952510-60952529 | None:intergenic | 60.0% | |
| GGAAACGAGACGGCGGAGAT+TGG | - | chr1.1:60952246-60952265 | None:intergenic | 60.0% | |
| GTGACTCGCCGTGACGCATT+AGG | - | chr1.1:60952130-60952149 | None:intergenic | 60.0% | |
| ! | GTGATGGAGCAAGGGAGTGG+TGG | + | chr1.1:60952811-60952830 | MS.gene96746:CDS | 60.0% |
| !! | CAGATGCGCCTAGAGGTGCT+TGG | + | chr1.1:60952923-60952942 | MS.gene96746:CDS | 60.0% |
| CTTGGCCGGAAACGAGACGG+CGG | - | chr1.1:60952253-60952272 | None:intergenic | 65.0% | |
| GACGCCGATCACGCGCTTCT+TGG | - | chr1.1:60952363-60952382 | None:intergenic | 65.0% | |
| TGGCGTGCAGATGCGCCTAG+AGG | + | chr1.1:60952916-60952935 | MS.gene96746:CDS | 65.0% | |
| TTTCTCCCTACGCCCGCACC+CGG | + | chr1.1:60952306-60952325 | MS.gene96746:CDS | 65.0% | |
| ! | TCGGCGGCGGATTCACCTTC+AGG | - | chr1.1:60952497-60952516 | None:intergenic | 65.0% |
| !! | CGGGTGATGGAGCAAGGGAG+TGG | + | chr1.1:60952808-60952827 | MS.gene96746:CDS | 65.0% |
| ACGGAGTGTGGACCGGGTGC+GGG | - | chr1.1:60952321-60952340 | None:intergenic | 70.0% | |
| ATCGCACAAGCCCGCCACGC+CGG | + | chr1.1:60952218-60952237 | MS.gene96746:CDS | 70.0% | |
| CACGGAGTGTGGACCGGGTG+CGG | - | chr1.1:60952322-60952341 | None:intergenic | 70.0% | |
| CGCCGTCTCGTTTCCGGCCA+AGG | + | chr1.1:60952251-60952270 | MS.gene96746:CDS | 70.0% | |
| CGGGCTTGTGCGATGCCGGA+TGG | - | chr1.1:60952212-60952231 | None:intergenic | 70.0% | |
| GAGACGGCGGAGATTGGCGC+CGG | - | chr1.1:60952240-60952259 | None:intergenic | 70.0% | |
| GCCAAGGCTGCTCCCCTGAC+TGG | + | chr1.1:60952267-60952286 | MS.gene96746:CDS | 70.0% | |
| GCCAGTCAGGGGAGCAGCCT+TGG | - | chr1.1:60952271-60952290 | None:intergenic | 70.0% | |
| GTCAGGGGAGCAGCCTTGGC+CGG | - | chr1.1:60952267-60952286 | None:intergenic | 70.0% | |
| !! | GTGGCGGGCTTGTGCGATGC+CGG | - | chr1.1:60952216-60952235 | None:intergenic | 70.0% |
| GTGGACCGGGTGCGGGCGTA+GGG | - | chr1.1:60952314-60952333 | None:intergenic | 75.0% | |
| TGTGGACCGGGTGCGGGCGT+AGG | - | chr1.1:60952315-60952334 | None:intergenic | 75.0% | |
| !! | GAGATTGGCGCCGGCGTGGC+GGG | - | chr1.1:60952231-60952250 | None:intergenic | 75.0% |
| !! | GGAGATTGGCGCCGGCGTGG+CGG | - | chr1.1:60952232-60952251 | None:intergenic | 75.0% |
| !!! | GGCGGAGATTGGCGCCGGCG+TGG | - | chr1.1:60952235-60952254 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 60952101 | 60953071 | 60952101 | ID=MS.gene96746 |
| chr1.1 | mRNA | 60952101 | 60953071 | 60952101 | ID=MS.gene96746.t1;Parent=MS.gene96746 |
| chr1.1 | exon | 60952101 | 60952536 | 60952101 | ID=MS.gene96746.t1.exon1;Parent=MS.gene96746.t1 |
| chr1.1 | CDS | 60952101 | 60952536 | 60952101 | ID=cds.MS.gene96746.t1;Parent=MS.gene96746.t1 |
| chr1.1 | exon | 60952629 | 60953071 | 60952629 | ID=MS.gene96746.t1.exon2;Parent=MS.gene96746.t1 |
| chr1.1 | CDS | 60952629 | 60953071 | 60952629 | ID=cds.MS.gene96746.t1;Parent=MS.gene96746.t1 |
| Gene Sequence |
| Protein sequence |
