AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97212

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97212.t1 MTR_7g013200 90.950 221 19 1 1 221 86 305 6.06e-147 419
MS.gene97212.t1 MTR_7g013200 89.231 65 7 0 218 282 376 440 1.30e-29 116
MS.gene97212.t1 MTR_7g013220 80.543 221 42 1 1 221 97 316 6.84e-129 374
MS.gene97212.t1 MTR_7g013220 79.688 64 13 0 218 281 387 450 7.56e-24 100
MS.gene97212.t1 MTR_7g013240 68.996 229 70 1 1 229 86 313 1.03e-111 330
MS.gene97212.t1 MTR_7g013240 54.688 64 29 0 218 281 376 439 3.79e-16 78.2
MS.gene97212.t1 MTR_7g013260 68.696 230 70 2 1 229 86 314 9.66e-110 325
MS.gene97212.t1 MTR_7g013260 53.125 64 30 0 218 281 377 440 1.11e-14 73.9
MS.gene97212.t1 MTR_7g013180 54.348 230 104 1 1 229 92 321 7.23e-85 261
MS.gene97212.t1 MTR_7g013180 56.250 64 25 1 218 281 384 444 1.99e-13 70.1
MS.gene97212.t1 MTR_3g479470 32.759 232 133 6 5 213 104 335 1.54e-25 105
MS.gene97212.t1 MTR_7g080940 30.165 242 142 7 2 226 91 322 2.53e-25 104
MS.gene97212.t1 MTR_7g080935 31.837 245 134 8 2 226 91 322 2.79e-25 104
MS.gene97212.t1 MTR_5g464810 32.759 232 135 6 3 213 102 333 3.56e-25 104
MS.gene97212.t1 MTR_5g064240 32.759 232 135 6 3 213 102 333 3.56e-25 104
MS.gene97212.t1 MTR_5g098960 29.614 233 151 7 21 240 107 339 4.44e-25 103
MS.gene97212.t1 MTR_7g080900 29.600 250 145 8 2 232 94 331 9.97e-22 94.7
MS.gene97212.t1 MTR_0036s0220 31.915 235 133 10 3 213 102 333 1.06e-21 94.7
MS.gene97212.t1 MTR_6g038230 32.035 231 127 7 22 232 111 331 1.21e-21 94.4
MS.gene97212.t1 MTR_5g031840 32.719 217 120 5 20 214 108 320 1.40e-21 94.4
MS.gene97212.t1 MTR_3g479490 28.148 270 154 7 7 253 99 351 3.07e-21 93.2
MS.gene97212.t1 MTR_3g479520 29.741 232 140 6 5 213 106 337 3.30e-21 93.2
MS.gene97212.t1 MTR_6g013990 30.660 212 128 6 21 213 122 333 3.69e-21 93.2
MS.gene97212.t1 MTR_3g008010 29.258 229 140 6 7 213 105 333 4.75e-20 89.7
MS.gene97212.t1 MTR_7g080950 27.711 249 152 8 2 232 86 324 1.43e-19 88.2
MS.gene97212.t1 MTR_7g011470 29.268 205 124 5 21 213 122 317 3.89e-19 87.0
MS.gene97212.t1 MTR_6g014250 28.837 215 131 6 21 213 119 333 4.13e-19 87.0
MS.gene97212.t1 MTR_5g464760 30.342 234 140 8 3 213 102 335 4.22e-19 87.0
MS.gene97212.t1 MTR_3g079480 28.148 270 154 9 7 253 114 366 4.30e-19 87.0
MS.gene97212.t1 MTR_7g011470 29.469 207 125 5 21 213 122 321 1.04e-18 85.9
MS.gene97212.t1 MTR_8g006730 29.508 244 137 9 5 227 92 321 1.37e-18 85.5
MS.gene97212.t1 MTR_2g008210 29.302 215 130 7 21 213 115 329 1.61e-18 85.5
MS.gene97212.t1 MTR_6g014170 29.808 208 122 6 21 213 119 317 2.35e-18 84.7
MS.gene97212.t1 MTR_8g009055 29.032 217 139 5 5 212 93 303 2.52e-18 84.7
MS.gene97212.t1 MTR_8g006270 30.622 209 126 6 19 216 104 304 3.66e-18 84.3
MS.gene97212.t1 MTR_6g038200 30.303 231 131 8 22 232 111 331 4.23e-18 84.0
MS.gene97212.t1 MTR_6g014220 28.837 215 131 6 21 213 119 333 6.29e-18 83.6
MS.gene97212.t1 MTR_6g014200 27.160 243 143 9 21 240 119 350 6.83e-18 83.6
MS.gene97212.t1 MTR_6g014290 29.302 215 130 6 21 213 119 333 7.14e-18 83.6
MS.gene97212.t1 MTR_6g014270 28.505 214 132 7 21 213 121 334 8.13e-18 83.2
MS.gene97212.t1 MTR_5g031860 33.023 215 124 6 20 214 114 328 8.62e-18 83.2
MS.gene97212.t1 MTR_6g038220 29.237 236 137 8 17 232 105 330 8.93e-18 83.2
MS.gene97212.t1 MTR_8g009050 27.650 217 142 5 5 212 93 303 9.93e-18 83.2
MS.gene97212.t1 MTR_6g013440 28.037 214 133 7 21 213 123 336 1.04e-17 83.2
MS.gene97212.t1 MTR_6g014150 27.907 215 132 7 21 213 119 332 1.48e-17 82.4
MS.gene97212.t1 MTR_6g014020 28.037 214 133 7 21 213 122 335 1.54e-17 82.4
MS.gene97212.t1 MTR_6g013680 25.402 311 171 10 21 278 69 371 1.65e-17 82.0
MS.gene97212.t1 MTR_4g094220 28.311 219 132 6 21 214 116 334 3.08e-17 81.6
MS.gene97212.t1 MTR_4g095008 28.788 264 137 12 12 240 102 349 3.78e-17 81.6
MS.gene97212.t1 MTR_6g038300 29.365 252 145 9 2 232 93 332 4.45e-17 81.3
MS.gene97212.t1 MTR_6g014040 28.037 214 133 6 21 213 123 336 7.73e-17 80.5
MS.gene97212.t1 MTR_6g013900 28.505 214 132 6 21 213 121 334 8.95e-17 80.1
MS.gene97212.t1 MTR_8g008990 27.189 217 143 4 5 212 93 303 3.26e-16 78.6
MS.gene97212.t1 MTR_3g069710 30.275 218 124 8 15 215 101 307 3.41e-16 78.6
MS.gene97212.t1 MTR_3g069690 32.735 223 127 9 5 214 91 303 4.67e-16 78.2
MS.gene97212.t1 MTR_6g014186 26.389 216 134 7 21 213 119 332 6.48e-16 77.8
MS.gene97212.t1 MTR_6g014050 31.308 214 126 8 21 213 123 336 7.14e-16 77.8
MS.gene97212.t1 MTR_6g013960 26.761 213 135 6 21 212 122 334 8.68e-16 77.4
MS.gene97212.t1 MTR_8g027885 26.754 228 134 8 5 216 103 313 8.68e-16 77.4
MS.gene97212.t1 MTR_6g014187 28.241 216 130 7 21 213 122 335 9.83e-16 77.4
MS.gene97212.t1 MTR_8g006260 26.471 238 150 7 5 227 96 323 1.07e-15 77.0
MS.gene97212.t1 MTR_6g023665 26.172 256 152 8 5 232 100 346 1.09e-15 77.0
MS.gene97212.t1 MTR_4g064987 28.049 246 155 8 8 242 93 327 1.37e-15 76.6
MS.gene97212.t1 MTR_6g013450 25.581 215 138 6 21 213 122 336 1.70e-15 76.6
MS.gene97212.t1 MTR_8g059425 29.032 217 127 7 21 213 120 333 2.11e-15 76.3
MS.gene97212.t1 MTR_4g094920 27.203 261 145 10 12 240 117 364 2.29e-15 76.3
MS.gene97212.t1 MTR_6g013920 28.037 214 133 6 21 213 121 334 2.30e-15 76.3
MS.gene97212.t1 MTR_0184s0040 29.730 222 142 7 5 217 108 324 2.39e-15 76.3
MS.gene97212.t1 MTR_0078s0190 29.730 222 142 7 5 217 108 324 2.39e-15 76.3
MS.gene97212.t1 MTR_5g035580 27.897 233 137 11 21 232 108 330 2.51e-15 75.9
MS.gene97212.t1 MTR_1g107380 27.962 211 132 6 20 216 122 326 2.65e-15 75.9
MS.gene97212.t1 MTR_7g047030 28.992 238 150 10 5 230 93 323 3.49e-15 75.5
MS.gene97212.t1 MTR_7g047270 28.992 238 150 10 5 230 93 323 3.49e-15 75.5
MS.gene97212.t1 MTR_8g006710 26.577 222 140 6 5 212 91 303 4.99e-15 75.1
MS.gene97212.t1 MTR_7g117170 27.350 234 129 6 5 216 102 316 5.07e-15 75.1
MS.gene97212.t1 MTR_1g019510 25.541 231 155 4 5 226 93 315 5.98e-15 74.7
MS.gene97212.t1 MTR_5g058320 40.594 101 48 3 125 213 220 320 6.25e-15 74.7
MS.gene97212.t1 MTR_0184s0030 27.805 205 132 6 33 226 124 323 8.58e-15 74.3
MS.gene97212.t1 MTR_8g009063 26.126 222 139 5 5 212 100 310 9.03e-15 74.3
MS.gene97212.t1 MTR_6g011340 26.389 216 134 6 21 213 122 335 9.58e-15 74.3
MS.gene97212.t1 MTR_5g031830 29.461 241 140 7 20 232 114 352 1.06e-14 74.3
MS.gene97212.t1 MTR_0288s0020 27.397 219 141 6 4 213 107 316 1.18e-14 73.9
MS.gene97212.t1 MTR_6g488280 24.561 228 153 6 5 221 93 312 1.24e-14 73.9
MS.gene97212.t1 MTR_0428s0010 24.561 228 153 6 5 221 93 312 1.24e-14 73.9
MS.gene97212.t1 MTR_5g035560 28.085 235 134 10 21 232 106 328 1.49e-14 73.6
MS.gene97212.t1 MTR_6g014190 41.346 104 49 3 122 213 39 142 1.91e-14 72.4
MS.gene97212.t1 MTR_0078s0200 27.461 193 128 5 33 218 124 311 2.49e-14 72.0
MS.gene97212.t1 MTR_6g014240 28.019 207 110 7 29 213 113 302 2.70e-14 72.8
MS.gene97212.t1 MTR_6g038240 27.119 236 142 8 17 232 106 331 4.58e-14 72.4
MS.gene97212.t1 MTR_4g064987 27.935 247 148 9 8 242 93 321 5.00e-14 72.0
MS.gene97212.t1 MTR_8g006230 42.574 101 46 2 139 239 175 263 5.37e-14 70.9
MS.gene97212.t1 MTR_8g077590 25.862 232 143 8 5 219 94 313 1.09e-13 71.2
MS.gene97212.t1 MTR_6g033660 27.600 250 138 8 12 233 106 340 1.33e-13 70.9
MS.gene97212.t1 MTR_5g019580 38.889 108 50 4 123 217 213 317 1.39e-13 70.9
MS.gene97212.t1 MTR_5g019580 38.889 108 50 4 123 217 237 341 1.55e-13 70.9
MS.gene97212.t1 MTR_8g009067 27.155 232 143 8 5 221 93 313 2.03e-13 70.5
MS.gene97212.t1 MTR_1g019520 51.613 62 30 0 163 224 1 62 2.64e-13 67.8
MS.gene97212.t1 MTR_5g016480 26.667 210 129 7 23 214 119 321 3.08e-13 69.7
MS.gene97212.t1 MTR_0078s0010 40.659 91 52 2 141 230 234 323 4.29e-13 69.3
MS.gene97212.t1 MTR_6g005600 26.809 235 150 7 5 227 94 318 4.32e-13 69.3
MS.gene97212.t1 MTR_8g064880 27.863 262 168 8 4 249 102 358 4.34e-13 69.3
MS.gene97212.t1 MTR_3g479610 29.187 209 103 8 64 253 8 190 4.87e-13 68.6
MS.gene97212.t1 MTR_8g009067 35.659 129 63 5 106 221 74 195 8.09e-13 68.2
MS.gene97212.t1 MTR_8g009073 34.677 124 71 3 106 221 63 184 1.08e-12 67.8
MS.gene97212.t1 MTR_6g014310 26.636 214 136 6 21 213 123 336 1.27e-12 67.8
MS.gene97212.t1 MTR_8g027870 24.312 218 152 4 5 216 103 313 1.46e-12 67.8
MS.gene97212.t1 MTR_8g007585 53.448 58 27 0 156 213 190 247 1.47e-12 67.4
MS.gene97212.t1 MTR_0891s0010 32.258 124 70 2 104 213 21 144 1.76e-12 66.6
MS.gene97212.t1 MTR_6g013435 32.075 159 76 5 156 282 149 307 1.95e-12 66.6
MS.gene97212.t1 MTR_8g088560 26.339 224 137 8 5 211 97 309 2.15e-12 67.4
MS.gene97212.t1 MTR_8g009073 34.677 124 71 3 106 221 192 313 2.30e-12 67.0
MS.gene97212.t1 MTR_8g012650 32.192 146 80 6 92 228 188 323 2.70e-12 67.0
MS.gene97212.t1 MTR_8g012745 25.943 212 139 5 21 220 110 315 3.11e-12 66.6
MS.gene97212.t1 MTR_8g012635 27.803 223 137 9 21 228 110 323 4.41e-12 66.2
MS.gene97212.t1 MTR_0078s0060 40.260 77 44 1 141 217 234 308 5.17e-12 66.2
MS.gene97212.t1 MTR_6g033725 26.786 224 132 7 33 233 124 338 8.68e-12 65.5
MS.gene97212.t1 MTR_6g033625 27.234 235 136 8 12 230 106 321 9.62e-12 65.5
MS.gene97212.t1 MTR_8g465670 25.333 225 145 9 5 217 94 307 9.68e-12 65.5
MS.gene97212.t1 MTR_8g064870 28.319 226 135 9 16 222 112 329 1.03e-11 65.1
MS.gene97212.t1 MTR_8g008970 44.048 84 34 3 144 221 237 313 1.04e-11 65.5
MS.gene97212.t1 MTR_4g485590 28.986 207 115 10 46 233 126 319 1.54e-11 64.7
MS.gene97212.t1 MTR_8g074550 44.928 69 35 1 144 212 243 308 1.58e-11 64.7
MS.gene97212.t1 MTR_7g046490 30.263 152 91 5 86 227 170 316 1.67e-11 64.7
MS.gene97212.t1 MTR_8g012630 46.479 71 34 2 165 231 203 273 1.83e-11 64.3
MS.gene97212.t1 MTR_5g090630 24.651 215 147 5 6 212 91 298 3.77e-11 63.5
MS.gene97212.t1 MTR_0477s0010 50.000 58 29 0 156 213 115 172 4.44e-11 62.8
MS.gene97212.t1 MTR_5g045960 26.695 236 145 9 22 241 120 343 5.22e-11 63.2
MS.gene97212.t1 MTR_4g485630 26.627 169 93 6 86 233 186 344 6.27e-11 62.8
MS.gene97212.t1 MTR_1g107350 27.586 232 132 11 3 213 100 316 6.89e-11 62.8
MS.gene97212.t1 MTR_8g083290 27.727 220 121 9 21 212 104 313 8.36e-11 62.4
MS.gene97212.t1 MTR_8g006220 24.561 228 143 8 5 217 93 306 9.15e-11 62.4
MS.gene97212.t1 MTR_2g098430 23.770 244 150 7 1 226 98 323 9.20e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97212.t1 AT3G02100 38.095 231 132 3 1 220 101 331 3.23e-48 167
MS.gene97212.t1 AT1G22360 34.199 231 127 8 7 213 103 332 1.01e-26 108
MS.gene97212.t1 AT1G22360 34.199 231 127 8 7 213 103 332 1.21e-26 108
MS.gene97212.t1 AT1G22370 30.222 225 139 4 7 213 106 330 2.23e-25 105
MS.gene97212.t1 AT1G22400 31.330 233 132 7 7 213 106 336 2.87e-24 102
MS.gene97212.t1 AT1G22340 30.736 231 137 7 7 214 106 336 6.31e-24 101
MS.gene97212.t1 AT1G22380 31.739 230 134 7 7 213 106 335 3.08e-23 99.0
MS.gene97212.t1 AT3G22250 26.389 216 132 4 21 209 103 318 4.03e-22 95.9
MS.gene97212.t1 AT3G46700 29.412 204 134 4 19 215 100 300 1.58e-21 94.0
MS.gene97212.t1 AT3G46690 31.132 212 132 6 19 222 105 310 4.36e-20 89.7
MS.gene97212.t1 AT1G78270 31.776 214 124 7 21 212 120 333 2.22e-19 88.2
MS.gene97212.t1 AT5G59590 30.732 205 129 6 19 215 106 305 3.35e-19 87.4
MS.gene97212.t1 AT3G46670 28.708 209 137 5 15 215 100 304 1.09e-18 85.9
MS.gene97212.t1 AT3G55700 33.508 191 106 8 36 215 126 306 1.49e-18 85.5
MS.gene97212.t1 AT3G46660 29.327 208 138 4 15 215 106 311 6.95e-18 83.6
MS.gene97212.t1 AT1G22370 33.987 153 83 4 79 213 8 160 9.61e-18 82.0
MS.gene97212.t1 AT5G59580 29.756 205 131 6 19 215 104 303 9.81e-18 83.2
MS.gene97212.t1 AT5G38010 28.054 221 140 6 18 227 108 320 1.11e-17 82.8
MS.gene97212.t1 AT5G37950 27.679 224 143 6 15 227 77 292 1.28e-17 82.0
MS.gene97212.t1 AT2G23260 28.044 271 150 10 2 240 80 337 1.29e-17 82.8
MS.gene97212.t1 AT3G55710 31.556 225 127 9 6 214 96 309 1.49e-17 82.4
MS.gene97212.t1 AT5G37950 27.753 227 133 6 15 227 77 286 1.53e-17 81.6
MS.gene97212.t1 AT2G23250 28.870 239 131 8 18 238 88 305 1.94e-17 82.0
MS.gene97212.t1 AT3G46650 31.515 165 102 5 59 215 127 288 2.09e-17 82.0
MS.gene97212.t1 AT3G21790 28.000 225 145 5 5 217 98 317 2.21e-17 82.0
MS.gene97212.t1 AT5G38040 25.676 222 150 6 15 227 101 316 6.57e-17 80.5
MS.gene97212.t1 AT3G46680 29.048 210 134 6 15 215 102 305 6.63e-17 80.5
MS.gene97212.t1 AT3G46720 29.694 229 145 7 15 233 100 322 1.07e-16 80.1
MS.gene97212.t1 AT4G15550 27.523 218 135 9 5 211 109 314 2.54e-16 79.0
MS.gene97212.t1 AT3G11340 38.235 136 77 3 86 214 164 299 2.74e-16 79.0
MS.gene97212.t1 AT3G21560 27.542 236 140 8 21 239 122 343 7.07e-16 77.8
MS.gene97212.t1 AT2G26480 28.421 190 110 8 43 217 124 302 3.54e-15 75.5
MS.gene97212.t1 AT1G05680 27.490 251 149 8 5 232 89 329 4.16e-15 75.5
MS.gene97212.t1 AT1G01420 29.493 217 137 6 6 212 98 308 7.51e-15 74.7
MS.gene97212.t1 AT1G05675 28.326 233 142 7 5 219 89 314 7.65e-15 74.7
MS.gene97212.t1 AT1G01420 29.493 217 137 6 6 212 95 305 7.76e-15 74.7
MS.gene97212.t1 AT3G21780 26.471 204 144 3 20 217 105 308 1.29e-14 73.9
MS.gene97212.t1 AT3G16520 25.794 252 153 9 6 233 98 339 3.43e-14 72.8
MS.gene97212.t1 AT3G16520 25.794 252 153 9 6 233 98 339 3.47e-14 72.8
MS.gene97212.t1 AT3G16520 25.794 252 153 9 6 233 98 339 3.76e-14 72.4
MS.gene97212.t1 AT2G43840 30.290 241 126 13 17 233 101 323 4.11e-14 72.4
MS.gene97212.t1 AT2G43840 29.876 241 127 12 17 233 101 323 4.31e-14 72.4
MS.gene97212.t1 AT4G15280 26.852 216 137 7 15 217 106 313 5.46e-14 72.0
MS.gene97212.t1 AT4G15280 26.852 216 137 7 15 217 138 345 6.20e-14 72.0
MS.gene97212.t1 AT5G12890 27.668 253 135 11 15 234 119 356 8.42e-14 71.6
MS.gene97212.t1 AT4G15480 24.806 258 158 6 16 262 122 354 2.39e-13 70.1
MS.gene97212.t1 AT4G15490 27.751 209 130 9 21 213 115 318 2.88e-13 70.1
MS.gene97212.t1 AT2G36970 28.095 210 125 5 21 213 123 323 3.90e-13 69.7
MS.gene97212.t1 AT5G05870 26.786 224 145 7 5 215 93 310 4.57e-13 69.3
MS.gene97212.t1 AT4G15260 23.280 189 138 2 34 217 7 193 4.73e-13 68.9
MS.gene97212.t1 AT5G05860 28.780 205 131 7 20 215 105 303 1.13e-12 68.2
MS.gene97212.t1 AT2G28080 26.606 218 140 7 32 232 138 352 1.13e-12 68.2
MS.gene97212.t1 AT1G01390 27.650 217 141 6 6 212 112 322 1.21e-12 68.2
MS.gene97212.t1 AT1G01390 27.650 217 141 6 6 212 95 305 1.62e-12 67.8
MS.gene97212.t1 AT4G36770 29.555 247 138 11 1 228 88 317 8.73e-12 65.5
MS.gene97212.t1 AT3G21800 23.318 223 159 3 5 217 94 314 9.02e-12 65.5
MS.gene97212.t1 AT3G50740 44.000 75 37 1 143 217 241 310 1.04e-11 65.1
MS.gene97212.t1 AT1G07250 26.455 189 131 3 35 216 136 323 1.11e-11 65.1
MS.gene97212.t1 AT3G21750 22.667 225 153 6 4 215 88 304 1.42e-11 64.7
MS.gene97212.t1 AT5G05900 26.606 218 147 6 5 212 93 307 1.52e-11 64.7
MS.gene97212.t1 AT2G30140 27.692 195 116 6 32 212 122 305 1.89e-11 64.3
MS.gene97212.t1 AT2G43820 26.556 241 135 11 17 233 101 323 2.02e-11 64.3
MS.gene97212.t1 AT2G31750 31.126 151 87 3 86 219 164 314 3.50e-11 63.5
MS.gene97212.t1 AT2G31750 30.061 163 97 3 74 219 152 314 3.61e-11 63.5
MS.gene97212.t1 AT2G30140 27.411 197 115 7 32 212 122 306 3.95e-11 63.5
MS.gene97212.t1 AT2G15480 29.386 228 110 10 20 218 125 330 4.04e-11 63.5
MS.gene97212.t1 AT1G05560 24.038 208 131 6 16 211 102 294 4.80e-11 63.2
MS.gene97212.t1 AT5G66690 39.080 87 48 1 143 229 236 317 5.15e-11 63.2
MS.gene97212.t1 AT2G15490 25.225 222 143 6 20 226 122 335 6.26e-11 62.8
MS.gene97212.t1 AT1G05560 24.038 208 131 6 16 211 152 344 6.33e-11 62.8
MS.gene97212.t1 AT2G15480 29.386 228 110 10 20 218 125 330 6.44e-11 62.8
MS.gene97212.t1 AT5G05880 36.364 88 56 0 130 217 219 306 6.63e-11 62.8

Find 58 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTCCAGCTTTGGCATATT+TGG 0.212574 7.3:-84430744 None:intergenic
TATTATTGTTACCTTCAATA+TGG 0.223301 7.3:+84428698 MS.gene97212:CDS
CTAAGGCTAATTCTTTAAAT+TGG 0.229806 7.3:-84431061 None:intergenic
GAATTAGACAAGGATGAAAA+TGG 0.235869 7.3:+84431374 MS.gene97212:CDS
ACTCCATCATCAATTAGTTT+AGG 0.236606 7.3:-84428813 None:intergenic
CTCCATCATCAATTAGTTTA+GGG 0.245474 7.3:-84428812 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7.3:-84430895 None:intergenic
CTAATTCTTTAAATTGGTTT+TGG 0.262998 7.3:-84431055 None:intergenic
GAGCTGAATTTCTTGATCTT+TGG 0.276157 7.3:-84430718 None:intergenic
GGACAAAGCTTAGGAATTAA+AGG 0.285150 7.3:+84428738 MS.gene97212:CDS
CCACCAATGTCCTAACTTCA+TGG 0.310232 7.3:-84430832 None:intergenic
GACTAGCTCAGCAACTTCTT+TGG 0.311316 7.3:+84428773 MS.gene97212:CDS
CTTCAATATGGGATGGGCTT+TGG 0.339287 7.3:+84428710 MS.gene97212:CDS
AATAGAAGATGTTAATGCTT+TGG 0.376579 7.3:+84428653 MS.gene97212:CDS
TTGGATAACATAGTAGAAAA+TGG 0.393196 7.3:+84431491 MS.gene97212:CDS
ATTATTGTTACCTTCAATAT+GGG 0.398070 7.3:+84428699 MS.gene97212:CDS
ATATGTTTCCTTCGGTAGTT+TGG 0.403181 7.3:+84431022 MS.gene97212:CDS
CTTCGGTAGTTTGGCAGTAA+TGG 0.405126 7.3:+84431031 MS.gene97212:CDS
AAGACATGACTTCCTTAGAT+TGG 0.418488 7.3:+84430970 MS.gene97212:CDS
ATGGGATGGGCTTTGGAAGT+TGG 0.427573 7.3:+84428717 MS.gene97212:CDS
TTAACATCTTCTATTAGCTT+AGG 0.429956 7.3:-84428645 None:intergenic
ACAGCAACAAAAGTTCATTC+TGG 0.432292 7.3:+84430943 MS.gene97212:CDS
GAGATGCAAACCATGAAGTT+AGG 0.437422 7.3:+84430822 MS.gene97212:CDS
TTGGAAGTTGGACAAAGCTT+AGG 0.440936 7.3:+84428729 MS.gene97212:CDS
TCCATCATCAATGGGCCAAT+TGG 0.441886 7.3:-84430915 None:intergenic
CAATTTAAAGAATTAGCCTT+AGG 0.449998 7.3:+84431062 MS.gene97212:CDS
GGGCCAATTGGTAGGAACTT+TGG 0.452202 7.3:-84430903 None:intergenic
TTGCTTATCTAGCCAATCTA+AGG 0.467824 7.3:-84430982 None:intergenic
CTCTCCAAATATGCCAAAGC+TGG 0.471314 7.3:+84430740 MS.gene97212:CDS
TCACCAAAGTTCCTACCAAT+TGG 0.471332 7.3:+84430900 MS.gene97212:CDS
ACCAATTGGCCCATTGATGA+TGG 0.475756 7.3:+84430914 MS.gene97212:CDS
AATTAGACAAGGATGAAAAT+GGG 0.477251 7.3:+84431375 MS.gene97212:CDS
TCCAAAGAAAAGGCTTGTTA+AGG 0.478158 7.3:-84431094 None:intergenic
AAAAGAAGAGATAAAGAAGA+AGG 0.488960 7.3:+84431406 MS.gene97212:CDS
GGACGAACAATCCAAAGAAA+AGG 0.490004 7.3:-84431104 None:intergenic
TTTACCTTGTTGTCATTACT+CGG 0.492713 7.3:-84431125 None:intergenic
AGAAAGATCATTGAAACTAA+AGG 0.497391 7.3:+84431460 MS.gene97212:CDS
TGTTACCTTCAATATGGGAT+GGG 0.503672 7.3:+84428704 MS.gene97212:CDS
TTGTTACCTTCAATATGGGA+TGG 0.510585 7.3:+84428703 MS.gene97212:CDS
AGAAGAGATAAAGAAGAAGG+TGG 0.522824 7.3:+84431409 MS.gene97212:CDS
TCTGTCGTATATGTTTCCTT+CGG 0.524672 7.3:+84431014 MS.gene97212:CDS
ATCAAATACGATCTTGTCAA+AGG 0.528049 7.3:-84430787 None:intergenic
ATCCCTAAACTAATTGATGA+TGG 0.529148 7.3:+84428810 MS.gene97212:CDS
CAAAGCCCATCCCATATTGA+AGG 0.533037 7.3:-84428709 None:intergenic
GAAACATATACGACAGAATG+AGG 0.551900 7.3:-84431008 None:intergenic
TCTATTAGCTTAGGAAGCAA+AGG 0.556044 7.3:-84428636 None:intergenic
CCATGAAGTTAGGACATTGG+TGG 0.558698 7.3:+84430832 MS.gene97212:CDS
GAAACTAAAGGAGTTAACAT+TGG 0.559214 7.3:+84431472 MS.gene97212:CDS
ATCTTGTCAAAGGTCCGCCA+TGG 0.592117 7.3:-84430777 None:intergenic
TCATCAATGGGCCAATTGGT+AGG 0.594029 7.3:-84430911 None:intergenic
GTTAAGGAGATCAAGTCCTA+AGG 0.597997 7.3:-84431078 None:intergenic
GATGGAGTAATTGATTCAGC+AGG 0.610610 7.3:+84428828 MS.gene97212:CDS
AAACCATGAAGTTAGGACAT+TGG 0.627911 7.3:+84430829 MS.gene97212:CDS
GGTTGGATTTGAATTAGACA+AGG 0.633037 7.3:+84431364 MS.gene97212:intron
ATTAGCTTAGGAAGCAAAGG+AGG 0.637521 7.3:-84428633 None:intergenic
CATTACTGCCAAACTACCGA+AGG 0.660154 7.3:-84431030 None:intergenic
ACATATACGACAGAATGAGG+TGG 0.716919 7.3:-84431005 None:intergenic
TCGTCCGAGTAATGACAACA+AGG 0.724446 7.3:+84431121 MS.gene97212:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATATATATTGATTTAAAA+CGG + chr7.3:84430214-84430233 MS.gene97212:intron 10.0%
!! AGTTTGTATATATGATTAAA+TGG - chr7.3:84429100-84429119 None:intergenic 15.0%
!! ATATTAATTAAAATAACCAC+TGG + chr7.3:84429495-84429514 MS.gene97212:intron 15.0%
!! ATTAATATTGAAACTCATTT+AGG - chr7.3:84429329-84429348 None:intergenic 15.0%
!! GTTTGTATATATGATTAAAT+GGG - chr7.3:84429099-84429118 None:intergenic 15.0%
!! TATTAATTAAAATAACCACT+GGG + chr7.3:84429496-84429515 MS.gene97212:intron 15.0%
!! TTAATATTGAAACTCATTTA+GGG - chr7.3:84429328-84429347 None:intergenic 15.0%
!!! AACTAATTAATTAAAGCTTT+TGG + chr7.3:84429814-84429833 MS.gene97212:intron 15.0%
!!! ACTAATTAATTAAAGCTTTT+GGG + chr7.3:84429815-84429834 MS.gene97212:intron 15.0%
!!! TGATTTAATTTATCTATTAC+AGG + chr7.3:84430687-84430706 MS.gene97212:intron 15.0%
!!! TTTTCTTTGTTTTGTTTTAT+TGG + chr7.3:84428864-84428883 MS.gene97212:intron 15.0%
!! AATATATATAGCCTAAAACA+TGG - chr7.3:84430205-84430224 None:intergenic 20.0%
!! ATCTCAAAAACTTTATCAAT+TGG + chr7.3:84431528-84431547 MS.gene97212:CDS 20.0%
!! ATTATTGTTACCTTCAATAT+GGG + chr7.3:84428699-84428718 MS.gene97212:CDS 20.0%
!! GACAAATCAAGAAATAAATA+AGG - chr7.3:84429722-84429741 None:intergenic 20.0%
!! TATTATTGTTACCTTCAATA+TGG + chr7.3:84428698-84428717 MS.gene97212:CDS 20.0%
!! TCTCAAAAACTTTATCAATT+GGG + chr7.3:84431529-84431548 MS.gene97212:CDS 20.0%
!!! ATTTTTTTAAAACTCACTTC+CGG + chr7.3:84429157-84429176 MS.gene97212:intron 20.0%
!!! CTAATTCTTTAAATTGGTTT+TGG - chr7.3:84431058-84431077 None:intergenic 20.0%
!!! TAATTAACCTTGTTTGATTT+TGG + chr7.3:84430100-84430119 MS.gene97212:intron 20.0%
! AAAAGAAGAGATAAAGAAGA+AGG + chr7.3:84431406-84431425 MS.gene97212:CDS 25.0%
! AATAGAAGATGTTAATGCTT+TGG + chr7.3:84428653-84428672 MS.gene97212:CDS 25.0%
! AATTAGACAAGGATGAAAAT+GGG + chr7.3:84431375-84431394 MS.gene97212:CDS 25.0%
! AGAAAGATCATTGAAACTAA+AGG + chr7.3:84431460-84431479 MS.gene97212:CDS 25.0%
! ATAAATTGATCAGTTGCAAA+TGG - chr7.3:84431314-84431333 None:intergenic 25.0%
! ATTTCAACCAAAATCAAACA+AGG - chr7.3:84430110-84430129 None:intergenic 25.0%
! CTAAGGCTAATTCTTTAAAT+TGG - chr7.3:84431064-84431083 None:intergenic 25.0%
! GTTAGTAGTTAATTCGTTAT+GGG - chr7.3:84430585-84430604 None:intergenic 25.0%
! TCAATGCTGCAAATATATTA+AGG + chr7.3:84430267-84430286 MS.gene97212:intron 25.0%
! TGTTAGTAGTTAATTCGTTA+TGG - chr7.3:84430586-84430605 None:intergenic 25.0%
! TTATATATCTGGGTAAAGTT+TGG + chr7.3:84428961-84428980 MS.gene97212:intron 25.0%
! TTGGATAACATAGTAGAAAA+TGG + chr7.3:84431491-84431510 MS.gene97212:CDS 25.0%
!! TAAAATGTTTCTAACCACAA+TGG - chr7.3:84429953-84429972 None:intergenic 25.0%
!! TTAACATCTTCTATTAGCTT+AGG - chr7.3:84428648-84428667 None:intergenic 25.0%
!!! AAAATAAAATGTTGGCTTTG+TGG - chr7.3:84429438-84429457 None:intergenic 25.0%
!!! ATTTTTGGAAATAGTCAAAG+TGG - chr7.3:84428921-84428940 None:intergenic 25.0%
!!! CAATTTAAAGAATTAGCCTT+AGG + chr7.3:84431062-84431081 MS.gene97212:CDS 25.0%
!!! GAATTAAAGGTGTTTTTCTT+TGG + chr7.3:84428751-84428770 MS.gene97212:CDS 25.0%
!!! TGGTTCAATATCTTTTTTTG+CGG - chr7.3:84431206-84431225 None:intergenic 25.0%
!!! TGTTTGATTTTGGTTGAAAT+CGG + chr7.3:84430110-84430129 MS.gene97212:intron 25.0%
!!! TTTTCCTCAAGTTTTTTCTT+AGG + chr7.3:84429689-84429708 MS.gene97212:intron 25.0%
!!! TTTTTTTTAAAACTCGGTTC+CGG + chr7.3:84429021-84429040 MS.gene97212:intron 25.0%
AAAGTCAGAAACTAACAACT+AGG + chr7.3:84429239-84429258 MS.gene97212:intron 30.0%
ACGTGAAAATAGTTCTTTGT+AGG + chr7.3:84430520-84430539 MS.gene97212:intron 30.0%
ACTTCCTAAGAAAAAACTTG+AGG - chr7.3:84429696-84429715 None:intergenic 30.0%
AGTCATATATTTGTGATGTG+TGG + chr7.3:84431339-84431358 MS.gene97212:intron 30.0%
ATATATTTGTGATGTGTGGA+AGG + chr7.3:84431343-84431362 MS.gene97212:intron 30.0%
ATCAAATACGATCTTGTCAA+AGG - chr7.3:84430790-84430809 None:intergenic 30.0%
ATCCCTAAACTAATTGATGA+TGG + chr7.3:84428810-84428829 MS.gene97212:CDS 30.0%
ATTAAAATAACCACTGGGTT+AGG + chr7.3:84429501-84429520 MS.gene97212:intron 30.0%
GAAACTAAAGGAGTTAACAT+TGG + chr7.3:84431472-84431491 MS.gene97212:CDS 30.0%
GAATTAGACAAGGATGAAAA+TGG + chr7.3:84431374-84431393 MS.gene97212:CDS 30.0%
GAGAGAGAAATATTTATAGC+AGG - chr7.3:84430563-84430582 None:intergenic 30.0%
TAAAGGCAAGATCGTTAATT+GGG + chr7.3:84431178-84431197 MS.gene97212:intron 30.0%
TAGTTCTTTGTAGGATATCT+AGG + chr7.3:84430529-84430548 MS.gene97212:intron 30.0%
TCCATTGGTAAAAAAAACGT+AGG + chr7.3:84429620-84429639 MS.gene97212:intron 30.0%
! ACTCCATCATCAATTAGTTT+AGG - chr7.3:84428816-84428835 None:intergenic 30.0%
! CTCCATCATCAATTAGTTTA+GGG - chr7.3:84428815-84428834 None:intergenic 30.0%
! TGCTGTGTTGTTATATATCT+GGG + chr7.3:84428951-84428970 MS.gene97212:intron 30.0%
! TTTACCTTGTTGTCATTACT+CGG - chr7.3:84431128-84431147 None:intergenic 30.0%
!! ACTTTTTAGTAAAGCCATTG+TGG + chr7.3:84429936-84429955 MS.gene97212:intron 30.0%
!! CAGCAGACAGATTTAATTTT+TGG - chr7.3:84428936-84428955 None:intergenic 30.0%
!!! ACCTACGTTTTTTTTACCAA+TGG - chr7.3:84429624-84429643 None:intergenic 30.0%
!!! TGTCATTTTCCATCATCAAT+GGG - chr7.3:84430926-84430945 None:intergenic 30.0%
AAACCATGAAGTTAGGACAT+TGG + chr7.3:84430829-84430848 MS.gene97212:CDS 35.0%
AAGACATGACTTCCTTAGAT+TGG + chr7.3:84430970-84430989 MS.gene97212:CDS 35.0%
AATCTTGATGAGGTATGCTT+TGG - chr7.3:84429597-84429616 None:intergenic 35.0%
ACAGCAACAAAAGTTCATTC+TGG + chr7.3:84430943-84430962 MS.gene97212:CDS 35.0%
ACCAGAATATACACCTTCTA+TGG - chr7.3:84431273-84431292 None:intergenic 35.0%
AGAAGAGATAAAGAAGAAGG+TGG + chr7.3:84431409-84431428 MS.gene97212:CDS 35.0%
AGACACATGATAGTTTCATG+TGG - chr7.3:84430322-84430341 None:intergenic 35.0%
ATATGTTTCCTTCGGTAGTT+TGG + chr7.3:84431022-84431041 MS.gene97212:CDS 35.0%
ATGATAGTTTCATGTGGTCT+CGG - chr7.3:84430316-84430335 None:intergenic 35.0%
ATTGGACACCTCAGATTAAT+CGG - chr7.3:84429055-84429074 None:intergenic 35.0%
CAAGTAAGGTGGAGTTTAAT+AGG - chr7.3:84430613-84430632 None:intergenic 35.0%
CAATGGAGATAATCTTGATG+AGG - chr7.3:84429607-84429626 None:intergenic 35.0%
CCTCACAACTTATTGAACTA+AGG + chr7.3:84429861-84429880 MS.gene97212:intron 35.0%
CCTTAGTTCAATAAGTTGTG+AGG - chr7.3:84429864-84429883 None:intergenic 35.0%
CTAAAGGCAAGATCGTTAAT+TGG + chr7.3:84431177-84431196 MS.gene97212:intron 35.0%
CTAAGAATCCAAGACAAGTA+AGG - chr7.3:84430627-84430646 None:intergenic 35.0%
CTAATGAAACAAGCTATAGC+AGG - chr7.3:84431230-84431249 None:intergenic 35.0%
CTCATCAAGATTATCTCCAT+TGG + chr7.3:84429605-84429624 MS.gene97212:intron 35.0%
GAAACATATACGACAGAATG+AGG - chr7.3:84431011-84431030 None:intergenic 35.0%
GAGCTGAATTTCTTGATCTT+TGG - chr7.3:84430721-84430740 None:intergenic 35.0%
GATGAATTCCTTGGAACTAA+AGG + chr7.3:84431161-84431180 MS.gene97212:intron 35.0%
GCTTGTTTCATTAGTCATTG+TGG + chr7.3:84431236-84431255 MS.gene97212:intron 35.0%
GGACAAAGCTTAGGAATTAA+AGG + chr7.3:84428738-84428757 MS.gene97212:CDS 35.0%
GGTTGGATTTGAATTAGACA+AGG + chr7.3:84431364-84431383 MS.gene97212:intron 35.0%
GTTTCATTAGTCATTGTGGT+TGG + chr7.3:84431240-84431259 MS.gene97212:intron 35.0%
TAAGGTAGAGATGTTCTACA+GGG + chr7.3:84430285-84430304 MS.gene97212:intron 35.0%
TAGTTCCAAGGAATTCATCA+GGG - chr7.3:84431160-84431179 None:intergenic 35.0%
TCTGTCGTATATGTTTCCTT+CGG + chr7.3:84431014-84431033 MS.gene97212:CDS 35.0%
TGTTACCTTCAATATGGGAT+GGG + chr7.3:84428704-84428723 MS.gene97212:CDS 35.0%
TTAAGGTAGAGATGTTCTAC+AGG + chr7.3:84430284-84430303 MS.gene97212:intron 35.0%
TTAGTTCCAAGGAATTCATC+AGG - chr7.3:84431161-84431180 None:intergenic 35.0%
TTGCTTATCTAGCCAATCTA+AGG - chr7.3:84430985-84431004 None:intergenic 35.0%
TTGTTACCTTCAATATGGGA+TGG + chr7.3:84428703-84428722 MS.gene97212:CDS 35.0%
! ACCATAGAAGGTGTATATTC+TGG + chr7.3:84431269-84431288 MS.gene97212:intron 35.0%
! ATTTTACAGTTGCAGTATGG+TGG - chr7.3:84430451-84430470 None:intergenic 35.0%
! CTACACAAGTACCATGTTTT+AGG + chr7.3:84430191-84430210 MS.gene97212:intron 35.0%
! CTGCTGTGTTGTTATATATC+TGG + chr7.3:84428950-84428969 MS.gene97212:intron 35.0%
! CTTGAGAGAAGTACACTTTA+AGG + chr7.3:84429275-84429294 MS.gene97212:intron 35.0%
! GGAAGTACAAATGTACAATG+TGG + chr7.3:84430131-84430150 MS.gene97212:intron 35.0%
! GGTATTTTACAGTTGCAGTA+TGG - chr7.3:84430454-84430473 None:intergenic 35.0%
! TCCTTAACAAGCCTTTTCTT+TGG + chr7.3:84431093-84431112 MS.gene97212:CDS 35.0%
! TCTATTAGCTTAGGAAGCAA+AGG - chr7.3:84428639-84428658 None:intergenic 35.0%
!! TCCAAAGAAAAGGCTTGTTA+AGG - chr7.3:84431097-84431116 None:intergenic 35.0%
!!! CTGTCATTTTCCATCATCAA+TGG - chr7.3:84430927-84430946 None:intergenic 35.0%
AAACTCCACCTTACTTGTCT+TGG + chr7.3:84430616-84430635 MS.gene97212:intron 40.0%
ACACTAAAAACGTTCCATGG+CGG + chr7.3:84430763-84430782 MS.gene97212:CDS 40.0%
ACATATACGACAGAATGAGG+TGG - chr7.3:84431008-84431027 None:intergenic 40.0%
AGAATCCAAGACAAGTAAGG+TGG - chr7.3:84430624-84430643 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGGT+TGG + chr7.3:84431347-84431366 MS.gene97212:intron 40.0%
CTGGTAAACCTTTCTTGTGT+TGG + chr7.3:84431288-84431307 MS.gene97212:intron 40.0%
CTTGGGTGTAGTACATCTAA+AGG + chr7.3:84430168-84430187 MS.gene97212:intron 40.0%
GAGATGCAAACCATGAAGTT+AGG + chr7.3:84430822-84430841 MS.gene97212:CDS 40.0%
GGACGAACAATCCAAAGAAA+AGG - chr7.3:84431107-84431126 None:intergenic 40.0%
GGTTGGAATTCTACCATAGA+AGG + chr7.3:84431257-84431276 MS.gene97212:intron 40.0%
GTTAAGGAGATCAAGTCCTA+AGG - chr7.3:84431081-84431100 None:intergenic 40.0%
GTTGAATTGTATTGCCGTGT+GGG + chr7.3:84430023-84430042 MS.gene97212:intron 40.0%
TCACCAAAGTTCCTACCAAT+TGG + chr7.3:84430900-84430919 MS.gene97212:CDS 40.0%
TCCCAAACTAACAACTAGCT+AGG + chr7.3:84429298-84429317 MS.gene97212:intron 40.0%
TGAAACAAGCTATAGCAGGA+TGG - chr7.3:84431226-84431245 None:intergenic 40.0%
TGAATGTAGGGTAGCTTATG+AGG + chr7.3:84429541-84429560 MS.gene97212:intron 40.0%
TGATAGTTTCATGTGGTCTC+GGG - chr7.3:84430315-84430334 None:intergenic 40.0%
TGGACACTAAAAACGTTCCA+TGG + chr7.3:84430760-84430779 MS.gene97212:CDS 40.0%
TGGTACTCTCACAAGTACTT+GGG + chr7.3:84430151-84430170 MS.gene97212:intron 40.0%
TGTTGAATTGTATTGCCGTG+TGG + chr7.3:84430022-84430041 MS.gene97212:intron 40.0%
TTGGAAGTTGGACAAAGCTT+AGG + chr7.3:84428729-84428748 MS.gene97212:CDS 40.0%
TTTAAATGACCCCCCACAAA+TGG - chr7.3:84429222-84429241 None:intergenic 40.0%
TTTGCTTCCAAGTGACATGT+TGG + chr7.3:84430405-84430424 MS.gene97212:intron 40.0%
! ACATGTCACTTGGAAGCAAA+AGG - chr7.3:84430405-84430424 None:intergenic 40.0%
! ATTAGCTTAGGAAGCAAAGG+AGG - chr7.3:84428636-84428655 None:intergenic 40.0%
! GATGGAGTAATTGATTCAGC+AGG + chr7.3:84428828-84428847 MS.gene97212:CDS 40.0%
! GCCTAGCTAGTTGTTAGTTT+GGG - chr7.3:84429302-84429321 None:intergenic 40.0%
! TGGGTTAGGTTTAGCAAACA+GGG + chr7.3:84429515-84429534 MS.gene97212:intron 40.0%
! TGGTAGGAACTTTGGTGATA+TGG - chr7.3:84430898-84430917 None:intergenic 40.0%
!! CTTCTGAGACGAAGAACATT+CGG - chr7.3:84430475-84430494 None:intergenic 40.0%
!!! ACGTTTTTAGTGTCCAGCTT+TGG - chr7.3:84430756-84430775 None:intergenic 40.0%
AATACCACCGTCCATTTGTG+GGG + chr7.3:84429072-84429091 MS.gene97212:intron 45.0%
AATCCCACTGTCCATTTGTG+GGG + chr7.3:84429208-84429227 MS.gene97212:intron 45.0%
ACAACTTTCCGTTACCCACA+CGG - chr7.3:84430040-84430059 None:intergenic 45.0%
ACCAATTGGCCCATTGATGA+TGG + chr7.3:84430914-84430933 MS.gene97212:CDS 45.0%
ATTAAATGGGCCCCCACAAA+TGG - chr7.3:84429086-84429105 None:intergenic 45.0%
CAAACAGGGGACTGAATGTA+GGG + chr7.3:84429529-84429548 MS.gene97212:intron 45.0%
CAAAGCCCATCCCATATTGA+AGG - chr7.3:84428712-84428731 None:intergenic 45.0%
CAATACCACCGTCCATTTGT+GGG + chr7.3:84429071-84429090 MS.gene97212:intron 45.0%
CAATCCCACTGTCCATTTGT+GGG + chr7.3:84429207-84429226 MS.gene97212:intron 45.0%
CATTACTGCCAAACTACCGA+AGG - chr7.3:84431033-84431052 None:intergenic 45.0%
CCACCAATGTCCTAACTTCA+TGG - chr7.3:84430835-84430854 None:intergenic 45.0%
CCATGAAGTTAGGACATTGG+TGG + chr7.3:84430832-84430851 MS.gene97212:CDS 45.0%
CGAATGTTCTTCGTCTCAGA+AGG + chr7.3:84430473-84430492 MS.gene97212:intron 45.0%
CGCCTAGCTAGTTGTTAGTT+TGG - chr7.3:84429303-84429322 None:intergenic 45.0%
CTCTCCAAATATGCCAAAGC+TGG + chr7.3:84430740-84430759 MS.gene97212:CDS 45.0%
CTTCGGTAGTTTGGCAGTAA+TGG + chr7.3:84431031-84431050 MS.gene97212:CDS 45.0%
GACCTGAGAACACATGAGAT+GGG - chr7.3:84430351-84430370 None:intergenic 45.0%
GCAAATGGCCAACACAAGAA+AGG - chr7.3:84431299-84431318 None:intergenic 45.0%
GCATACCCTGATGAATTCCT+TGG + chr7.3:84431152-84431171 MS.gene97212:intron 45.0%
GGGTTAGGTTTAGCAAACAG+GGG + chr7.3:84429516-84429535 MS.gene97212:intron 45.0%
GTACTTCTCTCAAGATCTCG+AGG - chr7.3:84429269-84429288 None:intergenic 45.0%
GTGGTACTCTCACAAGTACT+TGG + chr7.3:84430150-84430169 MS.gene97212:intron 45.0%
TACCCATCTCATGTGTTCTC+AGG + chr7.3:84430346-84430365 MS.gene97212:intron 45.0%
TCATCAATGGGCCAATTGGT+AGG - chr7.3:84430914-84430933 None:intergenic 45.0%
TCATGAGCCAACATGTCACT+TGG - chr7.3:84430415-84430434 None:intergenic 45.0%
TCCATCATCAATGGGCCAAT+TGG - chr7.3:84430918-84430937 None:intergenic 45.0%
TCGTCCGAGTAATGACAACA+AGG + chr7.3:84431121-84431140 MS.gene97212:CDS 45.0%
TTACAGTTGCAGTATGGTGG+TGG - chr7.3:84430448-84430467 None:intergenic 45.0%
TTCTCTCAAGATCTCGAGGT+TGG - chr7.3:84429265-84429284 None:intergenic 45.0%
TTGTATTGCCGTGTGGGTAA+CGG + chr7.3:84430029-84430048 MS.gene97212:intron 45.0%
! ACCTCAGATTAATCGGCTCT+TGG - chr7.3:84429048-84429067 None:intergenic 45.0%
! ACCTCAGATTAGTCGACTCT+TGG - chr7.3:84429184-84429203 None:intergenic 45.0%
! CCTCAGATTAATCGGCTCTT+GGG - chr7.3:84429047-84429066 None:intergenic 45.0%
! CCTCAGATTAGTCGACTCTT+GGG - chr7.3:84429183-84429202 None:intergenic 45.0%
! CGATCTTGCCTTTAGTTCCA+AGG - chr7.3:84431172-84431191 None:intergenic 45.0%
! CTGGGTTAGGTTTAGCAAAC+AGG + chr7.3:84429514-84429533 MS.gene97212:intron 45.0%
! CTTCAATATGGGATGGGCTT+TGG + chr7.3:84428710-84428729 MS.gene97212:CDS 45.0%
! GACTAGCTCAGCAACTTCTT+TGG + chr7.3:84428773-84428792 MS.gene97212:CDS 45.0%
! GTGTCCAGCTTTGGCATATT+TGG - chr7.3:84430747-84430766 None:intergenic 45.0%
! GTTTGCTAAACCTAACCCAG+TGG - chr7.3:84429514-84429533 None:intergenic 45.0%
! TGGAAGCAAAAGGTGCATTG+CGG - chr7.3:84430395-84430414 None:intergenic 45.0%
!! ATGTTGGCTTTGTGGTTGAG+TGG - chr7.3:84429430-84429449 None:intergenic 45.0%
!! TGTTGGCTTTGTGGTTGAGT+GGG - chr7.3:84429429-84429448 None:intergenic 45.0%
!! TAAAAATAAAAATAAAATGT+TGG - chr7.3:84429446-84429465 None:intergenic 5.0%
!!! TTTTTATTTTTTTTAAAACT+CGG + chr7.3:84429015-84429034 MS.gene97212:intron 5.0%
AGTTTCATGTGGTCTCGGGT+CGG - chr7.3:84430311-84430330 None:intergenic 50.0%
ATACCACCGTCCATTTGTGG+GGG + chr7.3:84429073-84429092 MS.gene97212:intron 50.0%
ATCCCACTGTCCATTTGTGG+GGG + chr7.3:84429209-84429228 MS.gene97212:intron 50.0%
ATCTTGTCAAAGGTCCGCCA+TGG - chr7.3:84430780-84430799 None:intergenic 50.0%
CCAATACCACCGTCCATTTG+TGG + chr7.3:84429070-84429089 MS.gene97212:intron 50.0%
CCAATCCCACTGTCCATTTG+TGG + chr7.3:84429206-84429225 MS.gene97212:intron 50.0%
CCACAAATGGACAGTGGGAT+TGG - chr7.3:84429209-84429228 None:intergenic 50.0%
CCACAAATGGACGGTGGTAT+TGG - chr7.3:84429073-84429092 None:intergenic 50.0%
CCCAAGAGCCGATTAATCTG+AGG + chr7.3:84429044-84429063 MS.gene97212:intron 50.0%
CCCAAGAGTCGACTAATCTG+AGG + chr7.3:84429180-84429199 MS.gene97212:intron 50.0%
CGACCTGAGAACACATGAGA+TGG - chr7.3:84430352-84430371 None:intergenic 50.0%
CGGTAGAGAAAGTTCAGCAG+GGG - chr7.3:84430375-84430394 None:intergenic 50.0%
GAATCAGCGTGGTCTAGTCT+CGG - chr7.3:84429398-84429417 None:intergenic 50.0%
GCAAACAGGGGACTGAATGT+AGG + chr7.3:84429528-84429547 MS.gene97212:intron 50.0%
GCGGTAGAGAAAGTTCAGCA+GGG - chr7.3:84430376-84430395 None:intergenic 50.0%
GGGAGAGTTAAGAATCAGCG+TGG - chr7.3:84429409-84429428 None:intergenic 50.0%
GGGCCAATTGGTAGGAACTT+TGG - chr7.3:84430906-84430925 None:intergenic 50.0%
TGCGGTAGAGAAAGTTCAGC+AGG - chr7.3:84430377-84430396 None:intergenic 50.0%
! AGATTAATCGGCTCTTGGGC+CGG - chr7.3:84429043-84429062 None:intergenic 50.0%
! AGATTAGTCGACTCTTGGGC+CGG - chr7.3:84429179-84429198 None:intergenic 50.0%
!! ATGGGATGGGCTTTGGAAGT+TGG + chr7.3:84428717-84428736 MS.gene97212:CDS 50.0%
AATGGGCCCCCACAAATGGA+CGG - chr7.3:84429082-84429101 None:intergenic 55.0%
ACCCCCCACAAATGGACAGT+GGG - chr7.3:84429214-84429233 None:intergenic 55.0%
TCCCACTGTCCATTTGTGGG+GGG + chr7.3:84429210-84429229 MS.gene97212:intron 55.0%
GACCCCCCACAAATGGACAG+TGG - chr7.3:84429215-84429234 None:intergenic 60.0%
GGGCCCCCACAAATGGACGG+TGG - chr7.3:84429079-84429098 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 84428630 84431559 84428630 ID=MS.gene97212
chr7.3 mRNA 84428630 84431559 84428630 ID=MS.gene97212.t1;Parent=MS.gene97212
chr7.3 exon 84428630 84428849 84428630 ID=MS.gene97212.t1.exon1;Parent=MS.gene97212.t1
chr7.3 CDS 84428630 84428849 84428630 ID=cds.MS.gene97212.t1;Parent=MS.gene97212.t1
chr7.3 exon 84430709 84431142 84430709 ID=MS.gene97212.t1.exon2;Parent=MS.gene97212.t1
chr7.3 CDS 84430709 84431142 84430709 ID=cds.MS.gene97212.t1;Parent=MS.gene97212.t1
chr7.3 exon 84431365 84431559 84431365 ID=MS.gene97212.t1.exon3;Parent=MS.gene97212.t1
chr7.3 CDS 84431365 84431559 84431365 ID=cds.MS.gene97212.t1;Parent=MS.gene97212.t1
Gene Sequence

>MS.gene97212

ATGCCTCCTTTGCTTCCTAAGCTAATAGAAGATGTTAATGCTTTGGATGCTGAAAATAAGATTTCTTGTATTATTGTTACCTTCAATATGGGATGGGCTTTGGAAGTTGGACAAAGCTTAGGAATTAAAGGTGTTTTTCTTTGGACTAGCTCAGCAACTTCTTTGGCTTATTGTTATAGCATCCCTAAACTAATTGATGATGGAGTAATTGATTCAGCAGGTAATTAAGAGTTATTTTCTTTGTTTTGTTTTATTGGTACAACTTATTGTTCATGCATTGTTAGTACACCACTTTGACTATTTCCAAAAATTAAATCTGTCTGCTGTGTTGTTATATATCTGGGTAAAGTTTGGAGAGCTGAAAAATTTCAATATTAGTATTTTATTTTTATTTTTTTTAAAACTCGGTTCCGGCCCAAGAGCCGATTAATCTGAGGTGTCCAATACCACCGTCCATTTGTGGGGGCCCATTTAATCATATATACAAACTGCTTCAGCTGAAAAAAATTATTATTAGTATTTTATTTATTTTTTTAAAACTCACTTCCGGCCCAAGAGTCGACTAATCTGAGGTGTCCAATCCCACTGTCCATTTGTGGGGGGTCATTTAAAGTCAGAAACTAACAACTAGGCCAACCTCGAGATCTTGAGAGAAGTACACTTTAAGGTCCCAAACTAACAACTAGCTAGGCGAACCCTAAATGAGTTTCAATATTAATATGTTAATCGTTAATTTGTTAGTATTTGCTCGAGATGAAAATCTAACCGAGACTAGACCACGCTGATTCTTAACTCTCCCACTCAACCACAAAGCCAACATTTTATTTTTATTTTTATAAGATAAGATTTAGTATGTCAAATGACAATATTAATTAAAATAACCACTGGGTTAGGTTTAGCAAACAGGGGACTGAATGTAGGGTAGCTTATGAGGAAGTTGCTTTTGACATTCATGCTTAGAATACCAAAGCATACCTCATCAAGATTATCTCCATTGGTAAAAAAAACGTAGGTAAGTAATGTGTAGATATTGATTATTGACAATTGATCTCGACATTTTTTTCCTCAAGTTTTTTCTTAGGAAGTATACCTTATTTATTTCTTGATTTGTCATGATGCACAATTGCAACTGACTAGCATTTATTTTTTGTAAGCTCTAGCAACTCAAATTACAATATTAAATTAACTAATTAATTAAAGCTTTTGGGTTAGACTTACGAATGACGCTAGTCCTCACAACTTATTGAACTAAGGTTTTGAATCAACGTAGTAAATATGATTAACTAATTATGTAAAAAACGACTTTACTTTTTAGTAAAGCCATTGTGGTTAGAAACATTTTATTCTTTTTAATATTATATTTCATTTCAAAGAAATTAATGAGATATTATTTGTTGAATTGTATTGCCGTGTGGGTAACGGAAAGTTGTAGTACAACTTTTTTGACATTTTGACTCAAAGTAGTACAACTAATTAACCTTGTTTGATTTTGGTTGAAATCGGAAGTACAAATGTACAATGTGGTACTCTCACAAGTACTTGGGTGTAGTACATCTAAAGGCTACACAAGTACCATGTTTTAGGCTATATATATTGATTTAAAACGGCATTATTCATTACATGATATACAAAATTATTCAATGCTGCAAATATATTAAGGTAGAGATGTTCTACAGGGCCGACCCGAGACCACATGAAACTATCATGTGTCTAAGCTACCCATCTCATGTGTTCTCAGGTCGCCCCTGCTGAACTTTCTCTACCGCAATGCACCTTTTGCTTCCAAGTGACATGTTGGCTCATGAATTTTCTGTTCCACCACCATACTGCAACTGTAAAATACCGAATGTTCTTCGTCTCAGAAGGAGTAGCTCAATCTTATGCGTTGAGACGTGAAAATAGTTCTTTGTAGGATATCTAGGATTCAGTTCCTGCTATAAATATTTCTCTCTCCCATAACGAATTAACTACTAACATTTACCTATTAAACTCCACCTTACTTGTCTTGGATTCTTAGTTAATTACTAGTAGTAAAAGTAAAAATATCAGAGTTCTAATGATTTAATTTATCTATTACAGGAATTTATACCAAAGATCAAGAAATTCAGCTCTCTCCAAATATGCCAAAGCTGGACACTAAAAACGTTCCATGGCGGACCTTTGACAAGATCGTATTTGATCATCTTGCACAAGAGATGCAAACCATGAAGTTAGGACATTGGTGGCTTTGCAACACAACTTATGATCTTGAGCAAGCAACATTTTCCATATCACCAAAGTTCCTACCAATTGGCCCATTGATGATGGAAAATGACAGCAACAAAAGTTCATTCTGGCAAGAAGACATGACTTCCTTAGATTGGCTAGATAAGCAACCACCTCATTCTGTCGTATATGTTTCCTTCGGTAGTTTGGCAGTAATGGACCAAAACCAATTTAAAGAATTAGCCTTAGGACTTGATCTCCTTAACAAGCCTTTTCTTTGGATTGTTCGTCCGAGTAATGACAACAAGGTAAACTACGCATACCCTGATGAATTCCTTGGAACTAAAGGCAAGATCGTTAATTGGGCACCGCAAAAAAAGATATTGAACCATCCTGCTATAGCTTGTTTCATTAGTCATTGTGGTTGGAATTCTACCATAGAAGGTGTATATTCTGGTAAACCTTTCTTGTGTTGGCCATTTGCAACTGATCAATTTATGAACAAGTCATATATTTGTGATGTGTGGAAGGTTGGATTTGAATTAGACAAGGATGAAAATGGGCTAGTACTAAAAGAAGAGATAAAGAAGAAGGTGGAACAATTGCTTGATGATCAAGATGTAAAAGAAAGATCATTGAAACTAAAGGAGTTAACATTGGATAACATAGTAGAAAATGGTCAATCTTCGAAGAATCTCAAAAACTTTATCAATTGGGCAATGTAA
Protein sequence

>MS.gene97212.t1

MPPLLPKLIEDVNALDAENKISCIIVTFNMGWALEVGQSLGIKGVFLWTSSATSLAYCYSIPKLIDDGVIDSAGIYTKDQEIQLSPNMPKLDTKNVPWRTFDKIVFDHLAQEMQTMKLGHWWLCNTTYDLEQATFSISPKFLPIGPLMMENDSNKSSFWQEDMTSLDWLDKQPPHSVVYVSFGSLAVMDQNQFKELALGLDLLNKPFLWIVRPSNDNKVGFELDKDENGLVLKEEIKKKVEQLLDDQDVKERSLKLKELTLDNIVENGQSSKNLKNFINWAM