Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97283.t1 | XP_003621667.2 | 97.7 | 1033 | 24 | 0 | 1 | 1033 | 1 | 1033 | 0.00E+00 | 1921 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97283.t1 | F4IRR2 | 75.5 | 1036 | 248 | 3 | 1 | 1031 | 1 | 1035 | 0.0e+00 | 1517.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97283.t1 | G7KT01 | 97.7 | 1033 | 24 | 0 | 1 | 1033 | 1 | 1033 | 0.0e+00 | 1921.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene97283 | 0.801467 | 8.88E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97283.t1 | MTR_7g021500 | 99.032 | 1033 | 10 | 0 | 1 | 1033 | 1 | 1033 | 0.0 | 2113 |
| MS.gene97283.t1 | MTR_7g021500 | 98.935 | 1033 | 10 | 1 | 1 | 1033 | 1 | 1032 | 0.0 | 2106 |
| MS.gene97283.t1 | MTR_1g116957 | 80.934 | 1028 | 187 | 4 | 6 | 1030 | 4 | 1025 | 0.0 | 1675 |
| MS.gene97283.t1 | MTR_7g107210 | 61.832 | 131 | 32 | 2 | 861 | 991 | 62 | 174 | 3.44e-31 | 120 |
| MS.gene97283.t1 | MTR_7g107210 | 58.442 | 77 | 29 | 2 | 732 | 806 | 1 | 76 | 5.51e-19 | 85.9 |
| MS.gene97283.t1 | MTR_0010s0220 | 22.913 | 611 | 381 | 26 | 10 | 573 | 16 | 583 | 2.91e-16 | 84.7 |
| MS.gene97283.t1 | MTR_7g107220 | 70.213 | 47 | 14 | 0 | 607 | 653 | 14 | 60 | 1.65e-15 | 72.4 |
| MS.gene97283.t1 | MTR_6g051660 | 22.576 | 629 | 390 | 24 | 13 | 587 | 18 | 603 | 1.18e-14 | 79.0 |
| MS.gene97283.t1 | MTR_8g027450 | 26.000 | 250 | 158 | 6 | 13 | 240 | 18 | 262 | 1.05e-12 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97283.t1 | AT2G31660 | 75.869 | 1036 | 244 | 3 | 1 | 1031 | 1 | 1035 | 0.0 | 1599 |
| MS.gene97283.t1 | AT3G59020 | 72.824 | 1034 | 275 | 2 | 1 | 1033 | 1 | 1029 | 0.0 | 1535 |
| MS.gene97283.t1 | AT3G59020 | 73.051 | 1039 | 265 | 3 | 1 | 1033 | 1 | 1030 | 0.0 | 1529 |
| MS.gene97283.t1 | AT1G26170 | 22.635 | 592 | 390 | 20 | 10 | 566 | 14 | 572 | 3.19e-19 | 94.4 |
| MS.gene97283.t1 | AT2G46520 | 25.095 | 263 | 170 | 7 | 13 | 250 | 18 | 278 | 1.06e-13 | 76.3 |
| MS.gene97283.t1 | AT3G17340 | 20.659 | 668 | 405 | 28 | 35 | 623 | 42 | 663 | 1.08e-13 | 76.3 |
| MS.gene97283.t1 | AT3G17340 | 20.659 | 668 | 405 | 28 | 35 | 623 | 42 | 663 | 1.21e-13 | 76.3 |
Find 232 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGCAAAAGCTCTGGTTTC+AGG | 0.166399 | 7.3:+78218416 | None:intergenic |
| GAGACTATTGTGGACAAATT+TGG | 0.196267 | 7.3:-78215822 | MS.gene97283:CDS |
| GCACTATGCAGGAAAGATTT+TGG | 0.216429 | 7.3:-78218381 | MS.gene97283:CDS |
| CATCAGAAATCTTCCATCTT+TGG | 0.220651 | 7.3:-78213278 | MS.gene97283:CDS |
| GACGGTGCACTTCTTGCTAT+TGG | 0.248971 | 7.3:-78216852 | MS.gene97283:CDS |
| TCTATTGCCTGGGGAGGCTT+TGG | 0.260775 | 7.3:-78213031 | MS.gene97283:CDS |
| GTTAACATTCTCTGCATTAT+AGG | 0.261419 | 7.3:+78215496 | None:intergenic |
| TCTCGGATCAGAACAATTTC+AGG | 0.261693 | 7.3:-78216228 | MS.gene97283:CDS |
| AGAAGACGGGGCCACTGTTC+GGG | 0.273316 | 7.3:+78221131 | None:intergenic |
| TCTTTCCTGCATAGTGCTTC+TGG | 0.274576 | 7.3:+78218387 | None:intergenic |
| TCTGATCCGAGAAGCTAATA+TGG | 0.288063 | 7.3:+78216239 | None:intergenic |
| AGCTCATCTGTAAAATATTC+TGG | 0.291802 | 7.3:-78220074 | MS.gene97283:CDS |
| CCACTTGTCCTCTACAATTC+TGG | 0.292641 | 7.3:+78213967 | None:intergenic |
| AGTGGCCCCGTCTTCTTGAT+TGG | 0.304542 | 7.3:-78221124 | MS.gene97283:CDS |
| ACGGTGCACTTCTTGCTATT+GGG | 0.315394 | 7.3:-78216851 | MS.gene97283:CDS |
| CTCTTCTCTGCTCAGCATGC+TGG | 0.317900 | 7.3:+78211466 | None:intergenic |
| CTCCCAGCTGATCTATTGCC+TGG | 0.317902 | 7.3:-78213042 | MS.gene97283:CDS |
| CTCTGGATATGTGGAGTCTT+TGG | 0.318505 | 7.3:-78215065 | MS.gene97283:CDS |
| AAGAATTGGTCTCCTGATTC+TGG | 0.319374 | 7.3:-78221615 | MS.gene97283:intron |
| AGAACTTTGTTGCAAAGAAT+TGG | 0.320126 | 7.3:-78221629 | MS.gene97283:CDS |
| ATTCTTCCTCAACTTCTTGA+TGG | 0.320971 | 7.3:-78215989 | MS.gene97283:intron |
| CTGACTATCAACAAAGTCTA+TGG | 0.330360 | 7.3:-78214218 | MS.gene97283:CDS |
| GTATCCACAAAGAAAATAAA+AGG | 0.334870 | 7.3:+78211667 | None:intergenic |
| ACTAGGACTGTGTCAAAATT+TGG | 0.337585 | 7.3:-78215778 | MS.gene97283:intron |
| CATAGACTTTGTTGATAGTC+AGG | 0.343539 | 7.3:+78214219 | None:intergenic |
| TTCTTCAATATCTAAGTAAC+AGG | 0.343715 | 7.3:-78218289 | MS.gene97283:intron |
| CAGAATCCGTAACACAAATA+AGG | 0.352114 | 7.3:+78221064 | None:intergenic |
| TCAACGGTAATTCTAAGATA+TGG | 0.355739 | 7.3:+78213930 | None:intergenic |
| AAAGGATCCACCTCATCAAT+TGG | 0.358594 | 7.3:+78211685 | None:intergenic |
| ATCAAAATATCTTCAATGCT+TGG | 0.360183 | 7.3:-78218700 | MS.gene97283:CDS |
| CACTCTGCAATATCTGTTGT+TGG | 0.362624 | 7.3:+78221500 | None:intergenic |
| CGACAATGATCAAAAGCTTT+GGG | 0.365813 | 7.3:-78217234 | MS.gene97283:CDS |
| GCCTGGGGAGGCTTTGGGCC+GGG | 0.370647 | 7.3:-78213025 | MS.gene97283:CDS |
| GCGACAATGATCAAAAGCTT+TGG | 0.373885 | 7.3:-78217235 | MS.gene97283:CDS |
| CTATTGCCTGGGGAGGCTTT+GGG | 0.374449 | 7.3:-78213030 | MS.gene97283:CDS |
| ACTTAGAAAGTTGGCTGAAC+AGG | 0.377099 | 7.3:-78212691 | MS.gene97283:intron |
| CCAGATGCTGGGGTGCAAAC+TGG | 0.380705 | 7.3:+78221724 | None:intergenic |
| GTATGCCCATATTAGCTTCT+CGG | 0.386295 | 7.3:-78216245 | MS.gene97283:CDS |
| GATTCTGGCGGATAAGAATA+TGG | 0.386352 | 7.3:-78214036 | MS.gene97283:CDS |
| GATAATTGAACTCAAGTGTC+TGG | 0.387313 | 7.3:+78211511 | None:intergenic |
| AACAACAGGCTGCTGCATTC+TGG | 0.389396 | 7.3:-78215666 | MS.gene97283:intron |
| ATATAGGCAGCATGGGTTGC+AGG | 0.390975 | 7.3:-78216271 | MS.gene97283:intron |
| AAGACAACTTCAATAAGCTT+TGG | 0.392269 | 7.3:+78213990 | None:intergenic |
| AATTATCAAGCTCTTGCTAA+TGG | 0.393125 | 7.3:-78211495 | MS.gene97283:CDS |
| TTAATATATGCAGTATTTCA+AGG | 0.398738 | 7.3:-78217334 | MS.gene97283:intron |
| CCAGTTTGCACCCCAGCATC+TGG | 0.398915 | 7.3:-78221724 | MS.gene97283:CDS |
| TGAAGACCTTGTATTTACTT+TGG | 0.399504 | 7.3:-78215844 | MS.gene97283:CDS |
| CATTGTCGCTAAAGCACATA+AGG | 0.401919 | 7.3:+78217249 | None:intergenic |
| TCATCGACAATGCGATAAAC+TGG | 0.402062 | 7.3:+78220177 | None:intergenic |
| AGCTGAAGATGATGATGATA+TGG | 0.406335 | 7.3:-78212811 | MS.gene97283:CDS |
| TCAACACGCACAGGAAGTTC+AGG | 0.407891 | 7.3:+78216169 | None:intergenic |
| TTTCTAAGATCCGGATCAAC+AGG | 0.409131 | 7.3:+78218626 | None:intergenic |
| CCAGTGATGGATTAACAATC+TGG | 0.409703 | 7.3:+78220115 | None:intergenic |
| TTGGTTCAACTTGCACAAAA+AGG | 0.411504 | 7.3:+78215527 | None:intergenic |
| GCTCATAGGCAAAGTCATTC+CGG | 0.414718 | 7.3:-78211771 | MS.gene97283:intron |
| TTTCTCACCATCAATATCTC+TGG | 0.415491 | 7.3:-78215082 | MS.gene97283:CDS |
| GCCTACAAGGATCAAGTTGC+AGG | 0.420847 | 7.3:-78212973 | MS.gene97283:intron |
| CTACAGGATCAACAAGTCTA+TGG | 0.421974 | 7.3:-78221089 | MS.gene97283:CDS |
| GGAATACTATTTCAAATAGA+AGG | 0.421988 | 7.3:+78217273 | None:intergenic |
| AAGGATCCACCTCATCAATT+GGG | 0.423497 | 7.3:+78211686 | None:intergenic |
| GATGGAAGCATTGGCGGATT+GGG | 0.423530 | 7.3:-78215034 | MS.gene97283:CDS |
| GAGAAGAGTAGAAATTGAAA+AGG | 0.424157 | 7.3:-78211451 | MS.gene97283:CDS |
| TGCCTGGGGAGGCTTTGGGC+CGG | 0.425673 | 7.3:-78213026 | MS.gene97283:CDS |
| AAGAAGACGGGGCCACTGTT+CGG | 0.426655 | 7.3:+78221130 | None:intergenic |
| ACCTGCAACTTGATCCTTGT+AGG | 0.429528 | 7.3:+78212972 | None:intergenic |
| TCTCAGCATATTGCAAAAGT+TGG | 0.433960 | 7.3:-78213307 | MS.gene97283:CDS |
| TCCCCAGGCAATAGATCAGC+TGG | 0.434158 | 7.3:+78213039 | None:intergenic |
| GTGGCCCCGTCTTCTTGATT+GGG | 0.434566 | 7.3:-78221123 | MS.gene97283:CDS |
| AGTCAGGATCTTTGCAAGTA+AGG | 0.441252 | 7.3:+78214235 | None:intergenic |
| ATGGGTGTTGATGCTGATGA+TGG | 0.445414 | 7.3:-78212735 | MS.gene97283:CDS |
| TTGAAGATTTGTATAGTCCT+AGG | 0.445708 | 7.3:-78217084 | MS.gene97283:CDS |
| TGACACAGTCCTAGTGCATA+AGG | 0.446952 | 7.3:+78215786 | None:intergenic |
| TGTTAAATGTCATTCGTGTA+GGG | 0.451075 | 7.3:-78218343 | MS.gene97283:CDS |
| TGATCTTCTAGTTGCCTACA+AGG | 0.451236 | 7.3:-78212986 | MS.gene97283:CDS |
| ACTCTGCAATATCTGTTGTT+GGG | 0.452003 | 7.3:+78221501 | None:intergenic |
| GTGAGACTCTCAAACCTCGC+TGG | 0.452142 | 7.3:+78211534 | None:intergenic |
| TCTTCTCTGCTCAGCATGCT+GGG | 0.452889 | 7.3:+78211467 | None:intergenic |
| CGCTCAAGTTCAGATTTGTA+TGG | 0.454117 | 7.3:+78216798 | None:intergenic |
| CCCCATGACTTTCTAAGATC+CGG | 0.462997 | 7.3:+78218617 | None:intergenic |
| GCAACAACCTCACCAGATGC+TGG | 0.463272 | 7.3:+78221712 | None:intergenic |
| TCCCAGCTGATCTATTGCCT+GGG | 0.463620 | 7.3:-78213041 | MS.gene97283:CDS |
| ATGGTGCCTTATTTGTGTTA+CGG | 0.464924 | 7.3:-78221070 | MS.gene97283:CDS |
| ATCTACTTAATATATTTAGC+AGG | 0.467819 | 7.3:-78220143 | MS.gene97283:CDS |
| CTGTGCAGAAGCTGCAAAAG+AGG | 0.469754 | 7.3:-78212838 | MS.gene97283:intron |
| TTGGCTCTGAGGTGGCCAAC+AGG | 0.471245 | 7.3:+78216738 | None:intergenic |
| CACATATCCAGAGATATTGA+TGG | 0.471352 | 7.3:+78215075 | None:intergenic |
| GTAGAGGACAAGTGGATCAC+TGG | 0.472456 | 7.3:-78213959 | MS.gene97283:CDS |
| AGCTGAACAGAACTTGAATC+AGG | 0.475733 | 7.3:-78222872 | MS.gene97283:intron |
| TCAAGAAGTTGAGGAAGAAT+AGG | 0.477880 | 7.3:+78215992 | None:intergenic |
| CTCAAGTTCCTCCTTTGTTG+AGG | 0.477906 | 7.3:-78221438 | MS.gene97283:intron |
| CCAACTGCGGCAAGAGCACC+TGG | 0.478690 | 7.3:+78215601 | None:intergenic |
| CCTGAGTTCAACAGTCCTGT+TGG | 0.483285 | 7.3:-78216753 | MS.gene97283:CDS |
| TTGTTAAATGTCATTCGTGT+AGG | 0.484037 | 7.3:-78218344 | MS.gene97283:CDS |
| CATCAATATCTCTGGATATG+TGG | 0.484268 | 7.3:-78215074 | MS.gene97283:CDS |
| GGAAGGTGAGCCTGTTGATC+CGG | 0.486563 | 7.3:-78218636 | MS.gene97283:CDS |
| AAATCTGCTATTTCCAGTGA+TGG | 0.486684 | 7.3:+78220102 | None:intergenic |
| ATCAAGTTGATAACTCTGTC+AGG | 0.487649 | 7.3:+78218311 | None:intergenic |
| AAGATCCACACGAATATGTA+AGG | 0.488550 | 7.3:-78217208 | MS.gene97283:CDS |
| GAGTCTTTGGCCAGTGATGA+TGG | 0.493968 | 7.3:-78215052 | MS.gene97283:CDS |
| GAAGCCTGCTCACTGATTCA+AGG | 0.496242 | 7.3:+78215554 | None:intergenic |
| GTTTGCGTGCTAATTTCAAA+AGG | 0.497055 | 7.3:-78213224 | MS.gene97283:intron |
| AAATCCATGGAAGCCGTCCT+AGG | 0.498061 | 7.3:+78217067 | None:intergenic |
| TGATGGAAGCATTGGCGGAT+TGG | 0.499827 | 7.3:-78215035 | MS.gene97283:CDS |
| TGCATTATAGGAAGCAAAGT+TGG | 0.500503 | 7.3:+78215508 | None:intergenic |
| CTCAGCATATTGCAAAAGTT+GGG | 0.501871 | 7.3:-78213306 | MS.gene97283:CDS |
| CAACAACCTCACCAGATGCT+GGG | 0.505537 | 7.3:+78221713 | None:intergenic |
| TACTCTCACACTTAGAAAGT+TGG | 0.505755 | 7.3:-78212700 | MS.gene97283:CDS |
| TTCTTTGTGGATACAATGAA+AGG | 0.506610 | 7.3:-78211658 | MS.gene97283:intron |
| GGAGAGAAAACATACATAGA+TGG | 0.506960 | 7.3:+78220047 | None:intergenic |
| TTAGAAAGTCATGGGGTTGG+TGG | 0.507251 | 7.3:-78218610 | MS.gene97283:CDS |
| GAACATTTGAGCAAAAGCTC+TGG | 0.508672 | 7.3:+78218409 | None:intergenic |
| TGAGACTCTCAAACCTCGCT+GGG | 0.508724 | 7.3:+78211535 | None:intergenic |
| CCAGATTGTTAATCCATCAC+TGG | 0.510051 | 7.3:-78220115 | MS.gene97283:CDS |
| CGGTGCACTTCTTGCTATTG+GGG | 0.514625 | 7.3:-78216850 | MS.gene97283:CDS |
| CCAGGTGCTCTTGCCGCAGT+TGG | 0.518767 | 7.3:-78215601 | MS.gene97283:CDS |
| ATTTGAAATATAGGCAGCAT+GGG | 0.520236 | 7.3:-78216278 | MS.gene97283:intron |
| CTCAAACCTCGCTGGGTCTG+AGG | 0.520311 | 7.3:+78211542 | None:intergenic |
| ACCCGGCCCAAAGCCTCCCC+AGG | 0.520617 | 7.3:+78213024 | None:intergenic |
| TAGTCCTAGGACGGCTTCCA+TGG | 0.521444 | 7.3:-78217071 | MS.gene97283:CDS |
| TCCGGATCTTAGAAAGTCAT+GGG | 0.525368 | 7.3:-78218618 | MS.gene97283:CDS |
| TGGGTGTTGATGCTGATGAT+GGG | 0.526785 | 7.3:-78212734 | MS.gene97283:CDS |
| AGTGATGATGGAAGCATTGG+CGG | 0.527330 | 7.3:-78215040 | MS.gene97283:CDS |
| AAGTTCAGATTTGTATGGCT+CGG | 0.527462 | 7.3:+78216803 | None:intergenic |
| ATTTACTTTGGAGACTATTG+TGG | 0.527772 | 7.3:-78215832 | MS.gene97283:CDS |
| CTGATCCGAGAAGCTAATAT+GGG | 0.527898 | 7.3:+78216240 | None:intergenic |
| GTTAAATGTCATTCGTGTAG+GGG | 0.528267 | 7.3:-78218342 | MS.gene97283:CDS |
| TTACCGTTGAACGTTTGAAT+CGG | 0.530449 | 7.3:-78213917 | MS.gene97283:CDS |
| ATGTTCCAGAAGCACTATGC+AGG | 0.531585 | 7.3:-78218392 | MS.gene97283:CDS |
| GAGATGGCGCCTTATGCACT+AGG | 0.533514 | 7.3:-78215795 | MS.gene97283:CDS |
| GCAACAAATGAAACCAAAGA+TGG | 0.534843 | 7.3:+78213265 | None:intergenic |
| CATTTGAAATATAGGCAGCA+TGG | 0.535877 | 7.3:-78216279 | MS.gene97283:intron |
| GCACCGTCTTTCTGTCTGTA+GGG | 0.536659 | 7.3:+78216867 | None:intergenic |
| ATTGTCGCTAAAGCACATAA+GGG | 0.537431 | 7.3:+78217250 | None:intergenic |
| CAGAGAATGTTAACAACAGA+TGG | 0.537521 | 7.3:-78215487 | MS.gene97283:CDS |
| CAACTCACTCACAAAATCCA+TGG | 0.538664 | 7.3:+78217054 | None:intergenic |
| CAATCCTTGAATCAGTGAGC+AGG | 0.538726 | 7.3:-78215558 | MS.gene97283:CDS |
| GCCAATGCTTCCATCATCAC+TGG | 0.539350 | 7.3:+78215042 | None:intergenic |
| CTTCACCCAATCAAGAAGAC+GGG | 0.539476 | 7.3:+78221118 | None:intergenic |
| GGCTCACCTTCCGAGGGTAC+AGG | 0.540327 | 7.3:+78218647 | None:intergenic |
| CAAGTGTGGCTCTGAATACC+CGG | 0.544844 | 7.3:+78213007 | None:intergenic |
| TATATACCTTGGCTCTGAGG+TGG | 0.548410 | 7.3:+78216730 | None:intergenic |
| GAAGACGGGGCCACTGTTCG+GGG | 0.548415 | 7.3:+78221132 | None:intergenic |
| AGCTGATCTATTGCCTGGGG+AGG | 0.549416 | 7.3:-78213037 | MS.gene97283:CDS |
| GCCAGTGATGATGGAAGCAT+TGG | 0.552604 | 7.3:-78215043 | MS.gene97283:CDS |
| TTGGGTGAAGCATAACCTAC+AGG | 0.553212 | 7.3:-78221105 | MS.gene97283:CDS |
| ATCAACAGGCTCACCTTCCG+AGG | 0.553548 | 7.3:+78218640 | None:intergenic |
| ATCCGGATCTTAGAAAGTCA+TGG | 0.553720 | 7.3:-78218619 | MS.gene97283:CDS |
| AAAGTCATGGGGTTGGTGGA+AGG | 0.554212 | 7.3:-78218606 | MS.gene97283:CDS |
| ATCTTAGAAAGTCATGGGGT+TGG | 0.555384 | 7.3:-78218613 | MS.gene97283:CDS |
| TGAAAAGGAAAGACTAGAGA+AGG | 0.556885 | 7.3:-78211436 | MS.gene97283:CDS |
| CATCATCGTCATCAGCGGGC+CGG | 0.558603 | 7.3:+78211752 | None:intergenic |
| ATGCTTCAATGAAAGATCGC+AGG | 0.558650 | 7.3:+78216134 | None:intergenic |
| CATAGACTTGTTGATCCTGT+AGG | 0.559097 | 7.3:+78221090 | None:intergenic |
| TCATCATCATCGTCATCAGC+GGG | 0.560966 | 7.3:+78211748 | None:intergenic |
| CCAGAATTGTAGAGGACAAG+TGG | 0.563002 | 7.3:-78213967 | MS.gene97283:CDS |
| AAAACAGAATCAACACGCAC+AGG | 0.563597 | 7.3:+78216160 | None:intergenic |
| TGGAGTACAACAGCGAGACT+AGG | 0.564252 | 7.3:+78222931 | None:intergenic |
| TTGGACAACTATATTTCAAG+AGG | 0.567640 | 7.3:-78214270 | MS.gene97283:CDS |
| GATGATGAAGCTGATGATCC+AGG | 0.569065 | 7.3:-78215619 | MS.gene97283:CDS |
| GGACAAATTTGGAGAAGAGA+TGG | 0.572769 | 7.3:-78215811 | MS.gene97283:CDS |
| TGACATTTAACAAGTTCAAG+TGG | 0.573589 | 7.3:+78218354 | None:intergenic |
| CCTTTCCTTACATATTCGTG+TGG | 0.574951 | 7.3:+78217203 | None:intergenic |
| GATTGGGACTGAGAGCAGCT+TGG | 0.575061 | 7.3:+78222911 | None:intergenic |
| TACATACCATCAAGAAGTTG+AGG | 0.577585 | 7.3:+78215983 | None:intergenic |
| AGCTTCATCATCAGCTTCAG+CGG | 0.579389 | 7.3:+78215630 | None:intergenic |
| AGTCCGATTCAAACGTTCAA+CGG | 0.580256 | 7.3:+78213914 | None:intergenic |
| TTTCAAATAGAAGGACATCA+AGG | 0.581594 | 7.3:+78217282 | None:intergenic |
| GTGGACAACAACTGTGACAT+GGG | 0.583340 | 7.3:-78221681 | MS.gene97283:CDS |
| GCAGTCCCCAATTGATGAGG+TGG | 0.584971 | 7.3:-78211692 | MS.gene97283:CDS |
| TGCACCGTCTTTCTGTCTGT+AGG | 0.584975 | 7.3:+78216866 | None:intergenic |
| TTAAATGTCATTCGTGTAGG+GGG | 0.588051 | 7.3:-78218341 | MS.gene97283:CDS |
| CTAAATATATTAAGTAGATG+AGG | 0.590999 | 7.3:+78220147 | None:intergenic |
| ACTTCAATAAGCTTTGGAGC+TGG | 0.593594 | 7.3:+78213996 | None:intergenic |
| TTGCACCCCAGCATCTGGTG+AGG | 0.593704 | 7.3:-78221719 | MS.gene97283:CDS |
| GTTGTCTTCCAGAATTGTAG+AGG | 0.594993 | 7.3:-78213975 | MS.gene97283:CDS |
| TGCTTCAATGAAAGATCGCA+GGG | 0.595913 | 7.3:+78216135 | None:intergenic |
| CCCAGCTGATCTATTGCCTG+GGG | 0.601094 | 7.3:-78213040 | MS.gene97283:CDS |
| AACTTAAGAAGCTGAAGCTG+TGG | 0.603289 | 7.3:+78211401 | None:intergenic |
| GCTTCACCCAATCAAGAAGA+CGG | 0.603722 | 7.3:+78221117 | None:intergenic |
| GAATATGTAAGGAAAGGCTA+TGG | 0.604609 | 7.3:-78217197 | MS.gene97283:intron |
| TAGTCTCCAAAGTAAATACA+AGG | 0.604936 | 7.3:+78215838 | None:intergenic |
| AGATTTGTATAGTCCTAGGA+CGG | 0.606209 | 7.3:-78217080 | MS.gene97283:CDS |
| TTGTCGCTAAAGCACATAAG+GGG | 0.606387 | 7.3:+78217251 | None:intergenic |
| ATAATTGAACTCAAGTGTCT+GGG | 0.608888 | 7.3:+78211512 | None:intergenic |
| GAGAGACCTGTACCCTCGGA+AGG | 0.610009 | 7.3:-78218653 | MS.gene97283:CDS |
| AGAGTGACAAAGACTTGGTG+AGG | 0.616809 | 7.3:-78221483 | MS.gene97283:CDS |
| TAGAGGACAAGTGGATCACT+GGG | 0.619111 | 7.3:-78213958 | MS.gene97283:CDS |
| CTTGAAATATAGTTGTCCAA+AGG | 0.619730 | 7.3:+78214273 | None:intergenic |
| ATTGCAGAGTGACAAAGACT+TGG | 0.620592 | 7.3:-78221488 | MS.gene97283:CDS |
| TCTTTCATTGAAGCATGCAA+AGG | 0.621670 | 7.3:-78216127 | MS.gene97283:intron |
| AACAGGCTGCTGCATTCTGG+AGG | 0.621735 | 7.3:-78215663 | MS.gene97283:intron |
| AGTGAGTTGGTTCGGAAACG+TGG | 0.622392 | 7.3:-78217040 | MS.gene97283:CDS |
| ATTGGAGAGACCTGTACCCT+CGG | 0.622894 | 7.3:-78218657 | MS.gene97283:CDS |
| ACAGTAATGAAATTAAGCCA+AGG | 0.626248 | 7.3:+78213067 | None:intergenic |
| ATCATCATCATCGTCATCAG+CGG | 0.628624 | 7.3:+78211747 | None:intergenic |
| CCACACGAATATGTAAGGAA+AGG | 0.631391 | 7.3:-78217203 | MS.gene97283:CDS |
| GAAGATGATGATGATATGGA+TGG | 0.632537 | 7.3:-78212807 | MS.gene97283:CDS |
| TGTTGGCCACCTCAGAGCCA+AGG | 0.634320 | 7.3:-78216736 | MS.gene97283:intron |
| AGGATCCACCTCATCAATTG+GGG | 0.635312 | 7.3:+78211687 | None:intergenic |
| GGTTCAAGTCAGATGAAGAG+AGG | 0.636436 | 7.3:-78220203 | MS.gene97283:CDS |
| CCCCAGGCAATAGATCAGCT+GGG | 0.638459 | 7.3:+78213040 | None:intergenic |
| GAGAAAACATACATAGATGG+AGG | 0.639097 | 7.3:+78220050 | None:intergenic |
| AACAACCTCACCAGATGCTG+GGG | 0.642530 | 7.3:+78221714 | None:intergenic |
| CAACTGTACCTCAACAAAGG+AGG | 0.642765 | 7.3:+78221430 | None:intergenic |
| CCAACAGGACTGTTGAACTC+AGG | 0.644515 | 7.3:+78216753 | None:intergenic |
| GGGTGTTGATGCTGATGATG+GGG | 0.645190 | 7.3:-78212733 | MS.gene97283:CDS |
| TGTGGACAACAACTGTGACA+TGG | 0.645773 | 7.3:-78221682 | MS.gene97283:CDS |
| GTTGGTGGAAGGTCAAGAAG+TGG | 0.648780 | 7.3:-78218595 | MS.gene97283:CDS |
| ATGTTAACAACAGATGGTCA+AGG | 0.652211 | 7.3:-78215481 | MS.gene97283:intron |
| GAGTGACAAAGACTTGGTGA+GGG | 0.653124 | 7.3:-78221482 | MS.gene97283:CDS |
| GACGATGATGAGGATGGCAG+TGG | 0.653303 | 7.3:-78212771 | MS.gene97283:CDS |
| AAACAACTGTACCTCAACAA+AGG | 0.655529 | 7.3:+78221427 | None:intergenic |
| TCAACAAAGTCTATGGAACA+TGG | 0.657389 | 7.3:-78214211 | MS.gene97283:CDS |
| TATCGTGTTGTAGATTCTGG+CGG | 0.658262 | 7.3:-78214048 | MS.gene97283:intron |
| TACAATCCTCAGACCCAGCG+AGG | 0.658273 | 7.3:-78211548 | MS.gene97283:CDS |
| ACTGATGACGATGATGAGGA+TGG | 0.662533 | 7.3:-78212777 | MS.gene97283:CDS |
| TCAAACTGATGACGATGATG+AGG | 0.663029 | 7.3:-78212781 | MS.gene97283:CDS |
| GTTGCAGTCCCCAATTGATG+AGG | 0.664608 | 7.3:-78211695 | MS.gene97283:CDS |
| GGCAACTAGAAGATCAAGTG+TGG | 0.671462 | 7.3:+78212993 | None:intergenic |
| TGTGTTTATAGGGTACAACT+TGG | 0.671749 | 7.3:-78221188 | MS.gene97283:intron |
| TCAACAGGCTCACCTTCCGA+GGG | 0.677767 | 7.3:+78218641 | None:intergenic |
| ATGCTGATTACCCCGAACAG+TGG | 0.682640 | 7.3:-78221142 | MS.gene97283:CDS |
| GGATCAGAACAATTTCAGGA+AGG | 0.683397 | 7.3:-78216224 | MS.gene97283:CDS |
| AGCACGTAAACAACCAACTG+CGG | 0.691745 | 7.3:+78215588 | None:intergenic |
| TGTCGCTAAAGCACATAAGG+GGG | 0.693532 | 7.3:+78217252 | None:intergenic |
| GAGGTTGTTGCAAATCATTG+TGG | 0.694963 | 7.3:-78221700 | MS.gene97283:CDS |
| TTCACCCAATCAAGAAGACG+GGG | 0.697457 | 7.3:+78221119 | None:intergenic |
| TGACATGGGTGTAAGACAAG+TGG | 0.708928 | 7.3:-78221667 | MS.gene97283:CDS |
| AAGCCCTACAGACAGAAAGA+CGG | 0.710008 | 7.3:-78216870 | MS.gene97283:CDS |
| AATAGAAGGACATCAAGGCG+AGG | 0.715224 | 7.3:+78217287 | None:intergenic |
| CCGGATCTTAGAAAGTCATG+GGG | 0.722438 | 7.3:-78218617 | MS.gene97283:CDS |
| TCTGGCGGATAAGAATATGG+AGG | 0.724541 | 7.3:-78214033 | MS.gene97283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 78211404 | 78222962 | 78211404 | ID=MS.gene97283 |
| chr7.3 | mRNA | 78211404 | 78222962 | 78211404 | ID=MS.gene97283.t1;Parent=MS.gene97283 |
| chr7.3 | exon | 78222873 | 78222962 | 78222873 | ID=MS.gene97283.t1.exon1;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78222873 | 78222962 | 78222873 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78221616 | 78221748 | 78221616 | ID=MS.gene97283.t1.exon2;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78221616 | 78221748 | 78221616 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78221439 | 78221526 | 78221439 | ID=MS.gene97283.t1.exon3;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78221439 | 78221526 | 78221439 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78221050 | 78221199 | 78221050 | ID=MS.gene97283.t1.exon4;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78221050 | 78221199 | 78221050 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78220062 | 78220224 | 78220062 | ID=MS.gene97283.t1.exon5;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78220062 | 78220224 | 78220062 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78218563 | 78218747 | 78218563 | ID=MS.gene97283.t1.exon6;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78218563 | 78218747 | 78218563 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78218290 | 78218463 | 78218290 | ID=MS.gene97283.t1.exon7;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78218290 | 78218463 | 78218290 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78217198 | 78217343 | 78217198 | ID=MS.gene97283.t1.exon8;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78217198 | 78217343 | 78217198 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78216989 | 78217112 | 78216989 | ID=MS.gene97283.t1.exon9;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78216989 | 78217112 | 78216989 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78216737 | 78216917 | 78216737 | ID=MS.gene97283.t1.exon10;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78216737 | 78216917 | 78216737 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78216128 | 78216287 | 78216128 | ID=MS.gene97283.t1.exon11;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78216128 | 78216287 | 78216128 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78215990 | 78216031 | 78215990 | ID=MS.gene97283.t1.exon12;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78215990 | 78216031 | 78215990 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78215779 | 78215897 | 78215779 | ID=MS.gene97283.t1.exon13;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78215779 | 78215897 | 78215779 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78215482 | 78215680 | 78215482 | ID=MS.gene97283.t1.exon14;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78215482 | 78215680 | 78215482 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78215016 | 78215147 | 78215016 | ID=MS.gene97283.t1.exon15;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78215016 | 78215147 | 78215016 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78214203 | 78214306 | 78214203 | ID=MS.gene97283.t1.exon16;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78214203 | 78214306 | 78214203 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78213878 | 78214057 | 78213878 | ID=MS.gene97283.t1.exon17;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78213878 | 78214057 | 78213878 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78213225 | 78213364 | 78213225 | ID=MS.gene97283.t1.exon18;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78213225 | 78213364 | 78213225 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78212974 | 78213113 | 78212974 | ID=MS.gene97283.t1.exon19;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78212974 | 78213113 | 78212974 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78212692 | 78212852 | 78212692 | ID=MS.gene97283.t1.exon20;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78212692 | 78212852 | 78212692 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78211659 | 78211785 | 78211659 | ID=MS.gene97283.t1.exon21;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78211659 | 78211785 | 78211659 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| chr7.3 | exon | 78211404 | 78211573 | 78211404 | ID=MS.gene97283.t1.exon22;Parent=MS.gene97283.t1 |
| chr7.3 | CDS | 78211404 | 78211573 | 78211404 | ID=cds.MS.gene97283.t1;Parent=MS.gene97283.t1 |
| Gene Sequence |
| Protein sequence |
