Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97958.t1 | RHN41686.1 | 94.8 | 97 | 5 | 0 | 1 | 97 | 1 | 97 | 1.50E-37 | 167.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97958.t1 | A0A072TS30 | 94.8 | 97 | 5 | 0 | 1 | 97 | 1 | 97 | 1.1e-37 | 167.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056470 | MS.gene97958 | 0.908169 | 2.29E-81 | -1.69E-46 |
| MS.gene058848 | MS.gene97958 | 0.86644 | 2.85E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97958.t1 | MTR_8g069925 | 91.549 | 639 | 30 | 5 | 1 | 633 | 1 | 621 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 188 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTAGGGGATGGGGTTT+TGG | 0.138205 | 8.4:+33366594 | None:intergenic |
| TGCTTGTGGGGTGGTGGTTC+TGG | 0.203685 | 8.4:+33366214 | None:intergenic |
| CTGTTGTTTGTTTGTATTAC+TGG | 0.204393 | 8.4:+33367500 | None:intergenic |
| TGTGGTGGTGGTTGAATTCT+AGG | 0.226591 | 8.4:+33366580 | None:intergenic |
| TTACAATGGCTGCAGTGTTT+TGG | 0.234464 | 8.4:-33367830 | None:intergenic |
| GAAGGAACTGGTGATGATTT+TGG | 0.235505 | 8.4:+33366313 | None:intergenic |
| TGCTGGTGCTGGTGCTTCTT+TGG | 0.270949 | 8.4:+33366417 | None:intergenic |
| AGCTGCCGTGACTGTGGTTA+TGG | 0.300372 | 8.4:+33367404 | None:intergenic |
| TGAAGTTGTACTTGGCAAAT+TGG | 0.303149 | 8.4:+33367737 | None:intergenic |
| TTGGCCGGTGCTGGTGCTTT+TGG | 0.306406 | 8.4:+33366436 | None:intergenic |
| AACTTCACAGGAGCGAGTTT+TGG | 0.324618 | 8.4:+33366649 | None:intergenic |
| GGTTTCACAGGAGAAGGTTT+TGG | 0.326918 | 8.4:+33366733 | None:intergenic |
| GGTGATGGTGGGAGAATTGC+TGG | 0.332216 | 8.4:+33366289 | None:intergenic |
| CTTAATGCTGGTGTAACCTT+TGG | 0.332628 | 8.4:+33366619 | None:intergenic |
| ACCGTTGGAGTTGCAACTTT+TGG | 0.332924 | 8.4:+33366883 | None:intergenic |
| GATGTTGGAGTTGTAGCTTT+TGG | 0.341303 | 8.4:+33366793 | None:intergenic |
| GGTGCTTCTTTGGCCGGTGC+TGG | 0.344916 | 8.4:+33366427 | None:intergenic |
| ATAGGCTGTTGTTTGTATAA+TGG | 0.354379 | 8.4:+33367585 | None:intergenic |
| GCAGGTGCTGGTGATACCTT+TGG | 0.361778 | 8.4:+33366466 | None:intergenic |
| TTTGGTACCTTTGCAGGTGC+TGG | 0.365683 | 8.4:+33366454 | None:intergenic |
| GGTGCTGGTGTGTCTATTGT+AGG | 0.366893 | 8.4:+33366256 | None:intergenic |
| ATTGTTGAACTTGAACTTGT+AGG | 0.370326 | 8.4:+33366127 | None:intergenic |
| GTGGTTGAATTCTAGGGGAT+GGG | 0.376592 | 8.4:+33366587 | None:intergenic |
| GGTTCTGGTGCATCATCTTC+AGG | 0.377101 | 8.4:+33366229 | None:intergenic |
| CGAAGCTGCTGTTGGCAACT+TGG | 0.377529 | 8.4:+33367179 | None:intergenic |
| GCAGGAGTTGCCGCCACAAT+AGG | 0.378335 | 8.4:+33367522 | None:intergenic |
| GCTGTTGGAGTCGTAGCTTT+TGG | 0.378998 | 8.4:+33366928 | None:intergenic |
| TCTTTGTCTGGTGCGGGTGC+TGG | 0.381750 | 8.4:+33366373 | None:intergenic |
| GAAACAGGTGGTATAGATAA+TGG | 0.387049 | 8.4:+33366526 | None:intergenic |
| TCATCAGCTAGTGGTGGTGC+TGG | 0.387208 | 8.4:+33366088 | None:intergenic |
| CTCTTGTGCTTGTGGGGTGG+TGG | 0.387724 | 8.4:+33366208 | None:intergenic |
| GCTGCCGTGACTGTGGTTAT+GGG | 0.389073 | 8.4:+33367405 | None:intergenic |
| GGTGCCGGTGTTTCTTTGTC+TGG | 0.389256 | 8.4:+33366361 | None:intergenic |
| ACAGGAGTTGCTGCCACAAT+AGG | 0.390855 | 8.4:+33367315 | None:intergenic |
| GAACTTGAACTTGTAGGTTC+TGG | 0.392200 | 8.4:+33366133 | None:intergenic |
| CAAGTTCAACAATCATTAGA+AGG | 0.392890 | 8.4:-33366117 | MS.gene97958:CDS |
| GATAATGGTGGTAGAGAAAC+AGG | 0.397687 | 8.4:+33366541 | None:intergenic |
| TCAAGTGACACACAACAAAA+TGG | 0.399239 | 8.4:+33365736 | None:intergenic |
| GCAGGAGTTGCTGCCACAAT+AGG | 0.401887 | 8.4:+33367567 | None:intergenic |
| GGTGCTGGTGCTTCTTTGGC+CGG | 0.404875 | 8.4:+33366421 | None:intergenic |
| TTAATGCTGGTGTAACCTTT+GGG | 0.404886 | 8.4:+33366620 | None:intergenic |
| GCAGGAGTTGCCGCCACAAT+AGG | 0.406498 | 8.4:+33367477 | None:intergenic |
| GGCAACTTGGAAGGTGCGGC+AGG | 0.411164 | 8.4:+33367192 | None:intergenic |
| AGATATTACCGCACTAGGAC+TGG | 0.411786 | 8.4:+33366024 | None:intergenic |
| GGTAATGGTGGAAGTGAAAC+AGG | 0.412384 | 8.4:+33366511 | None:intergenic |
| GGTGTTGGTGCAGGTGATGG+TGG | 0.414784 | 8.4:+33366277 | None:intergenic |
| CATCAGCTAGTGGTGGTGCT+GGG | 0.417438 | 8.4:+33366089 | None:intergenic |
| AGCTGCCGTGACCGTGGCTG+TGG | 0.419087 | 8.4:+33367656 | None:intergenic |
| GATGTCGGAGTCGCGACTTT+GGG | 0.422722 | 8.4:+33366973 | None:intergenic |
| TCATCTTCAGGTGCTGGTGC+TGG | 0.431144 | 8.4:+33366241 | None:intergenic |
| GATGCTGGAGACGTAACTTT+AGG | 0.431586 | 8.4:+33367018 | None:intergenic |
| GGTTGGTTGTTTGCTAGACA+AGG | 0.438663 | 8.4:+33367098 | None:intergenic |
| TGCTGCTGAGATCGTGGTCG+AGG | 0.438663 | 8.4:+33367242 | None:intergenic |
| GTTATGGGTTTGTTAGAAGT+AGG | 0.442540 | 8.4:+33367420 | None:intergenic |
| TTTGGAACTGGTGGTTTCAC+AGG | 0.447447 | 8.4:+33366721 | None:intergenic |
| TTGGGGACAGGTGACTTCAC+AGG | 0.448425 | 8.4:+33366991 | None:intergenic |
| GTGGTGGTGGTTGAATTCTA+GGG | 0.448441 | 8.4:+33366581 | None:intergenic |
| GGAGAAGTTGCTGCTACAAC+AGG | 0.450503 | 8.4:+33367693 | None:intergenic |
| GGTGCATCATCTTCAGGTGC+TGG | 0.451679 | 8.4:+33366235 | None:intergenic |
| TGGTTGAATTCTAGGGGATG+GGG | 0.451686 | 8.4:+33366588 | None:intergenic |
| AGAATTGCTGGGGAAGGAAC+TGG | 0.457371 | 8.4:+33366301 | None:intergenic |
| TTGTGTGTAGGTGCTGGTGC+TGG | 0.464570 | 8.4:+33366406 | None:intergenic |
| TTTGGAACTGGTGGTTTCAA+AGG | 0.467748 | 8.4:+33366766 | None:intergenic |
| TTGTGTGTTGGTGCTGGTGC+CGG | 0.470899 | 8.4:+33366346 | None:intergenic |
| AGATGTCGGAGTCGCGACTT+TGG | 0.473044 | 8.4:+33366972 | None:intergenic |
| TGTTTATTTGTACTACTAGC+AGG | 0.474859 | 8.4:+33367549 | None:intergenic |
| GGTGGTTGAATTCTAGGGGA+TGG | 0.477465 | 8.4:+33366586 | None:intergenic |
| TTGTATAATGGCAGTGTTGA+AGG | 0.479559 | 8.4:+33367597 | None:intergenic |
| ACCTTTGGTGGTTTAGAAGC+TGG | 0.479939 | 8.4:+33366481 | None:intergenic |
| TTTGGAACTGGTGGTTTCAC+AGG | 0.480404 | 8.4:+33366901 | None:intergenic |
| GTAGGTGTTGGTGCAGGTGA+TGG | 0.481502 | 8.4:+33366274 | None:intergenic |
| TGTTTGTTTGTATTACTAGC+AGG | 0.482983 | 8.4:+33367459 | None:intergenic |
| GGTGTTTCTTTGTCTGGTGC+GGG | 0.485076 | 8.4:+33366367 | None:intergenic |
| TTTGGGACTGGCAACTTCAC+AGG | 0.489154 | 8.4:+33366637 | None:intergenic |
| GGTTTCACAGGAGAGGCTGT+TGG | 0.490275 | 8.4:+33366913 | None:intergenic |
| GACTTCACAGGGGAAGATGC+TGG | 0.490421 | 8.4:+33367003 | None:intergenic |
| TGAAGGGTCCGATGGATTTG+TGG | 0.492048 | 8.4:+33367614 | None:intergenic |
| GGAGACGTAACTTTAGGAAC+TGG | 0.493413 | 8.4:+33367024 | None:intergenic |
| ATCAGCTAGTGGTGGTGCTG+GGG | 0.494871 | 8.4:+33366090 | None:intergenic |
| GGTTGTTGTTTCGCTACAAA+CGG | 0.496927 | 8.4:+33367714 | None:intergenic |
| TTTGGAACTGGTGACTTCAC+GGG | 0.497698 | 8.4:+33366946 | None:intergenic |
| TTTGGAACTATTGATTTCAC+AGG | 0.504358 | 8.4:+33366811 | None:intergenic |
| TGGGGACAGGTGACTTCACA+GGG | 0.509083 | 8.4:+33366992 | None:intergenic |
| CGGTGTTTCTTTGTCTGGTG+CGG | 0.510168 | 8.4:+33366366 | None:intergenic |
| GTGTTGGTGCAGGTGATGGT+GGG | 0.510337 | 8.4:+33366278 | None:intergenic |
| TGTTTGTTTGTATTACTGGC+AGG | 0.510981 | 8.4:+33367504 | None:intergenic |
| ACTGGTGGTTTCACAGGAGA+AGG | 0.515088 | 8.4:+33366727 | None:intergenic |
| TGGAGAAAGATGTTGTCAAC+CGG | 0.516475 | 8.4:-33365773 | MS.gene97958:CDS |
| CTAGGACTGGGTGCTGGTGA+TGG | 0.517224 | 8.4:+33366037 | None:intergenic |
| GCTGTTGGAGTTGTAACTTT+GGG | 0.517656 | 8.4:+33366838 | None:intergenic |
| GGTTTAGAAGCTGGTGGTAA+TGG | 0.518981 | 8.4:+33366490 | None:intergenic |
| GGTTTCAAAGGCGCAGATGT+TGG | 0.519485 | 8.4:+33366778 | None:intergenic |
| GATTTCACAGGTGCAGCTGT+TGG | 0.522982 | 8.4:+33366823 | None:intergenic |
| GATTTGACAGGAGCAGTTGT+TGG | 0.523966 | 8.4:+33366688 | None:intergenic |
| ATTATAGTTGGTAACTTGGA+TGG | 0.525141 | 8.4:+33367216 | None:intergenic |
| AGGGATTATAGTTGGTAACT+TGG | 0.525374 | 8.4:+33367212 | None:intergenic |
| GCAGGTGGTTGAGTGGTGGT+TGG | 0.526904 | 8.4:+33367081 | None:intergenic |
| GGTGCTGGTGATACCTTTGG+TGG | 0.527139 | 8.4:+33366469 | None:intergenic |
| GCAGATGGTGTACTAGAAGT+TGG | 0.527732 | 8.4:+33367156 | None:intergenic |
| GAAGTAGGAGAAGTTGCTGC+AGG | 0.532877 | 8.4:+33367435 | None:intergenic |
| AGCTGTTGGAGTTGTAACTT+TGG | 0.534149 | 8.4:+33366837 | None:intergenic |
| CACAATCTTATCATGTGCAA+TGG | 0.539050 | 8.4:-33365793 | MS.gene97958:CDS |
| TCAGCTAGTGGTGGTGCTGG+GGG | 0.540058 | 8.4:+33366091 | None:intergenic |
| TTTCTCTTGTGCTTGTGGGG+TGG | 0.542270 | 8.4:+33366205 | None:intergenic |
| GGGTTTGTTAGAAGTAGGAG+AGG | 0.542804 | 8.4:+33367263 | None:intergenic |
| TTGACAGGAGCAGTTGTTGG+AGG | 0.545208 | 8.4:+33366691 | None:intergenic |
| GGTGTGTCTATTGTAGGTGT+TGG | 0.547086 | 8.4:+33366262 | None:intergenic |
| TCTGGAACTGGTGATTTGAC+AGG | 0.548439 | 8.4:+33366676 | None:intergenic |
| GGCAGTGTTGAAGGGTCCGA+TGG | 0.550562 | 8.4:+33367606 | None:intergenic |
| TGGTGGTGGTTGAATTCTAG+GGG | 0.552720 | 8.4:+33366582 | None:intergenic |
| GGTGCGGCAGGGATTATAGT+TGG | 0.553825 | 8.4:+33367204 | None:intergenic |
| GTTGGTTGTTTGCTAGACAA+GGG | 0.553964 | 8.4:+33367099 | None:intergenic |
| GGAGTCGCGACTTTGGGGAC+AGG | 0.555734 | 8.4:+33366979 | None:intergenic |
| GGTACCAAAAGCACCAGCAC+CGG | 0.557719 | 8.4:-33366440 | MS.gene97958:CDS |
| GCTGTGGGTTTGTTAGAAGT+AGG | 0.560234 | 8.4:+33367672 | None:intergenic |
| GTTGTACTTGGCAAATTGGA+AGG | 0.562092 | 8.4:+33367741 | None:intergenic |
| TTTGTGGTTGGCAACTTCGA+TGG | 0.564553 | 8.4:+33367630 | None:intergenic |
| GAAGTAGGAGAGGTTGCTGC+TGG | 0.566340 | 8.4:+33367273 | None:intergenic |
| TTCGTGGTTGGCAACTTCGA+TGG | 0.567282 | 8.4:+33367378 | None:intergenic |
| TCTATTGTAGGTGTTGGTGC+AGG | 0.569333 | 8.4:+33366268 | None:intergenic |
| TTGTCTAGTGGCAATGTGGA+AGG | 0.571611 | 8.4:+33367345 | None:intergenic |
| GTCGAGGGTTTGTTAGAAGT+AGG | 0.572486 | 8.4:+33367258 | None:intergenic |
| GCTGCCGTGACCGTGGCTGT+GGG | 0.573904 | 8.4:+33367657 | None:intergenic |
| CGCACCAGACAAAGAAACAC+CGG | 0.574209 | 8.4:-33366365 | MS.gene97958:CDS |
| GCTGCTGAGATCGTGGTCGA+GGG | 0.574789 | 8.4:+33367243 | None:intergenic |
| AACTGGTGGTTTCACAGGAG+AGG | 0.575160 | 8.4:+33366906 | None:intergenic |
| GCTGGTGGTAATGGTAATGG+TGG | 0.575444 | 8.4:+33366499 | None:intergenic |
| ACAAACGGTGAAGTTGTACT+TGG | 0.576267 | 8.4:+33367729 | None:intergenic |
| TCCAAAAGTTGCAACTCCAA+CGG | 0.576649 | 8.4:-33366884 | MS.gene97958:CDS |
| GGCAATGTGGAAGGTGCAGA+TGG | 0.577063 | 8.4:+33367354 | None:intergenic |
| GAGCATTGATTGAGGCTAGA+GGG | 0.579571 | 8.4:+33367781 | None:intergenic |
| GGTGGGAGAATTGCTGGGGA+AGG | 0.580187 | 8.4:+33366295 | None:intergenic |
| GCTGCTGTTGGCAACTTGGA+AGG | 0.580282 | 8.4:+33367183 | None:intergenic |
| GAAGCTGGTGGTAATGGTAA+TGG | 0.580602 | 8.4:+33366496 | None:intergenic |
| GACTTCACGGGAGCAGATGT+CGG | 0.581588 | 8.4:+33366958 | None:intergenic |
| GGTTGCACCTGCAAAACCAC+TGG | 0.581757 | 8.4:-33366863 | MS.gene97958:CDS |
| GGGGAAGTTGCTACCACAGT+AGG | 0.582185 | 8.4:+33367120 | None:intergenic |
| AGCTGCAGGTGGTTGAGTGG+TGG | 0.582312 | 8.4:+33367077 | None:intergenic |
| GAAGTTGGCGAAGCTGCTGT+TGG | 0.582733 | 8.4:+33367171 | None:intergenic |
| GTGATGGTGGGAGAATTGCT+GGG | 0.585483 | 8.4:+33366290 | None:intergenic |
| TGCAGCTGCAGGTGGTTGAG+TGG | 0.585757 | 8.4:+33367074 | None:intergenic |
| GGTGCAGATGGATTCGTGGT+TGG | 0.586259 | 8.4:+33367366 | None:intergenic |
| TGTGAAGTTGCCAGTCCCAA+AGG | 0.587433 | 8.4:-33366635 | MS.gene97958:CDS |
| GTTGTAACTTTGGGAACCAG+TGG | 0.592255 | 8.4:+33366847 | None:intergenic |
| TGTATAATGGCAGTGTTGAA+GGG | 0.595029 | 8.4:+33367598 | None:intergenic |
| TTCTAACAAACCCACAGCCA+CGG | 0.599602 | 8.4:-33367667 | MS.gene97958:CDS |
| GATATTACCGCACTAGGACT+GGG | 0.602120 | 8.4:+33366025 | None:intergenic |
| TGGTGCTGCTGCTGAGATCG+TGG | 0.602747 | 8.4:+33367236 | None:intergenic |
| AAATAAACAACAGCCTATTG+TGG | 0.603463 | 8.4:-33367535 | MS.gene97958:CDS |
| ACCGCACTAGGACTGGGTGC+TGG | 0.604435 | 8.4:+33366031 | None:intergenic |
| TTGAGGCTAGAGGGTAGCAT+AGG | 0.606074 | 8.4:+33367790 | None:intergenic |
| TACTACAGTGAGTTCAGATG+AGG | 0.608314 | 8.4:-33366062 | MS.gene97958:CDS |
| GGTATCACCAGCACCTGCAA+AGG | 0.614130 | 8.4:-33366461 | MS.gene97958:CDS |
| ATGTCGGAGTCGCGACTTTG+GGG | 0.619341 | 8.4:+33366974 | None:intergenic |
| AAACAAACAACAGCCTATTG+TGG | 0.620655 | 8.4:-33367490 | MS.gene97958:CDS |
| GAAGTTGCTACCACAGTAGG+TGG | 0.621383 | 8.4:+33367123 | None:intergenic |
| GCTGGTGTAACCTTTGGGAC+TGG | 0.622487 | 8.4:+33366625 | None:intergenic |
| GGAAGGTGCAGATGGATTCG+TGG | 0.623437 | 8.4:+33367362 | None:intergenic |
| GGGTCCGATGGATTTGTGGT+TGG | 0.624838 | 8.4:+33367618 | None:intergenic |
| GCAACTTGGAAGGTGCGGCA+GGG | 0.627474 | 8.4:+33367193 | None:intergenic |
| ACCAGCTTCTAAACCACCAA+AGG | 0.630622 | 8.4:-33366482 | MS.gene97958:CDS |
| TTGGTTGTTTGCTAGACAAG+GGG | 0.634527 | 8.4:+33367100 | None:intergenic |
| AATGGCAATGGCAAGTACAC+CGG | 0.634578 | 8.4:+33365754 | None:intergenic |
| ACTACAGTGAGTTCAGATGA+GGG | 0.637655 | 8.4:-33366061 | MS.gene97958:CDS |
| GACACACAACAAAATGGCAA+TGG | 0.640606 | 8.4:+33365742 | None:intergenic |
| TGAGCATTGATTGAGGCTAG+AGG | 0.640763 | 8.4:+33367780 | None:intergenic |
| ACCAGCACCCAGTCCTAGTG+CGG | 0.642251 | 8.4:-33366032 | MS.gene97958:intron |
| ATACAAACAACAGCCTATTG+TGG | 0.642615 | 8.4:-33367580 | MS.gene97958:CDS |
| GTAGTATTATCATCAGCTAG+TGG | 0.646596 | 8.4:+33366079 | None:intergenic |
| TGGTGCAGCTGCCGTGACTG+TGG | 0.647996 | 8.4:+33367398 | None:intergenic |
| GTGTGATTGAGCATTGATTG+AGG | 0.648171 | 8.4:+33367773 | None:intergenic |
| GTAGGAGAGGTTGCTGCTGG+TGG | 0.649813 | 8.4:+33367276 | None:intergenic |
| GTTGCCAACCACAAATCCAT+CGG | 0.651630 | 8.4:-33367622 | MS.gene97958:CDS |
| TTTGGTGGTTTAGAAGCTGG+TGG | 0.652808 | 8.4:+33366484 | None:intergenic |
| TAAACAACAGCCTATTGTGG+CGG | 0.657290 | 8.4:-33367532 | MS.gene97958:CDS |
| TGGTGCAGCTGCCGTGACCG+TGG | 0.659686 | 8.4:+33367650 | None:intergenic |
| GTATTATCATCAGCTAGTGG+TGG | 0.662925 | 8.4:+33366082 | None:intergenic |
| TTGTTTGTCTAGTGGCAATG+TGG | 0.664510 | 8.4:+33367341 | None:intergenic |
| ACAGGTGGTATAGATAATGG+TGG | 0.665011 | 8.4:+33366529 | None:intergenic |
| CAAACCCATAACCACAGTCA+CGG | 0.667319 | 8.4:-33367409 | MS.gene97958:CDS |
| TGTTGGCAACTTGGAAGGTG+CGG | 0.669544 | 8.4:+33367188 | None:intergenic |
| CAAACAACAGCCTATTGTGG+CGG | 0.674147 | 8.4:-33367487 | MS.gene97958:CDS |
| AGACAAACAAAAGCCTATTG+TGG | 0.680059 | 8.4:-33367328 | MS.gene97958:CDS |
| TGGTTGTTTGCTAGACAAGG+GGG | 0.699788 | 8.4:+33367101 | None:intergenic |
| CAAACCCACAGCCACGGTCA+CGG | 0.711372 | 8.4:-33367661 | MS.gene97958:CDS |
| TGATGGTGGGAGAATTGCTG+GGG | 0.713120 | 8.4:+33366291 | None:intergenic |
| AATGGTGGAAGTGAAACAGG+TGG | 0.744272 | 8.4:+33366514 | None:intergenic |
| GGGGACAGGTGACTTCACAG+GGG | 0.779622 | 8.4:+33366993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATAAAATCATAAGATT+TGG | + | chr8.4:33367736-33367755 | None:intergenic | 15.0% |
| !! | AATTGTAACTTAAAGTAAAA+TGG | + | chr8.4:33367567-33367586 | None:intergenic | 15.0% |
| !! | TATATATTTATGAACCTCTT+TGG | - | chr8.4:33367586-33367605 | MS.gene97958:CDS | 20.0% |
| !! | TGATTTTATGTTTCACAGAA+TGG | - | chr8.4:33367743-33367762 | MS.gene97958:CDS | 25.0% |
| !!! | ATTGCATGAATTTGTTAATG+CGG | + | chr8.4:33367623-33367642 | None:intergenic | 25.0% |
| AAATAAACAACAGCCTATTG+TGG | - | chr8.4:33366026-33366045 | MS.gene97958:intron | 30.0% | |
| ATTGTTGAACTTGAACTTGT+AGG | + | chr8.4:33367437-33367456 | None:intergenic | 30.0% | |
| CAAGTTCAACAATCATTAGA+AGG | - | chr8.4:33367444-33367463 | MS.gene97958:CDS | 30.0% | |
| TGTTTATTTGTACTACTAGC+AGG | + | chr8.4:33366015-33366034 | None:intergenic | 30.0% | |
| TGTTTGTTTGTATTACTAGC+AGG | + | chr8.4:33366105-33366124 | None:intergenic | 30.0% | |
| ! | ATAGGCTGTTGTTTGTATAA+TGG | + | chr8.4:33365979-33365998 | None:intergenic | 30.0% |
| ! | CTGTTGTTTGTTTGTATTAC+TGG | + | chr8.4:33366064-33366083 | None:intergenic | 30.0% |
| !! | ATTATAGTTGGTAACTTGGA+TGG | + | chr8.4:33366348-33366367 | None:intergenic | 30.0% |
| !! | TTTGGAACTATTGATTTCAC+AGG | + | chr8.4:33366753-33366772 | None:intergenic | 30.0% |
| !!! | GGTTTTTTCTTTTTGTGTGT+TGG | + | chr8.4:33367230-33367249 | None:intergenic | 30.0% |
| !!! | TTTTTTTCTCTTGTGCTTGT+GGG | + | chr8.4:33367363-33367382 | None:intergenic | 30.0% |
| AAACAAACAACAGCCTATTG+TGG | - | chr8.4:33366071-33366090 | MS.gene97958:CDS | 35.0% | |
| AGACAAACAAAAGCCTATTG+TGG | - | chr8.4:33366233-33366252 | MS.gene97958:CDS | 35.0% | |
| ATACAAACAACAGCCTATTG+TGG | - | chr8.4:33365981-33366000 | MS.gene97958:intron | 35.0% | |
| ATACAGATTGTACTCTGACT+TGG | - | chr8.4:33367647-33367666 | MS.gene97958:CDS | 35.0% | |
| CACAATCTTATCATGTGCAA+TGG | - | chr8.4:33367768-33367787 | MS.gene97958:CDS | 35.0% | |
| GAAAAAGATATTACCGCACT+AGG | + | chr8.4:33367545-33367564 | None:intergenic | 35.0% | |
| GAAACAGGTGGTATAGATAA+TGG | + | chr8.4:33367038-33367057 | None:intergenic | 35.0% | |
| GTAGTATTATCATCAGCTAG+TGG | + | chr8.4:33367485-33367504 | None:intergenic | 35.0% | |
| TCAAGTGACACACAACAAAA+TGG | + | chr8.4:33367828-33367847 | None:intergenic | 35.0% | |
| TGAAGTTGTACTTGGCAAAT+TGG | + | chr8.4:33365827-33365846 | None:intergenic | 35.0% | |
| TGTTTGTTTGTATTACTGGC+AGG | + | chr8.4:33366060-33366079 | None:intergenic | 35.0% | |
| TTAATGCTGGTGTAACCTTT+GGG | + | chr8.4:33366944-33366963 | None:intergenic | 35.0% | |
| ! | TAGGAACTGGTGATTTTACA+GGG | + | chr8.4:33366527-33366546 | None:intergenic | 35.0% |
| ! | TGTATAATGGCAGTGTTGAA+GGG | + | chr8.4:33365966-33365985 | None:intergenic | 35.0% |
| ! | TTAGGAACTGGTGATTTTAC+AGG | + | chr8.4:33366528-33366547 | None:intergenic | 35.0% |
| ! | TTGTATAATGGCAGTGTTGA+AGG | + | chr8.4:33365967-33365986 | None:intergenic | 35.0% |
| !! | AGGGATTATAGTTGGTAACT+TGG | + | chr8.4:33366352-33366371 | None:intergenic | 35.0% |
| !! | ATAGGCTTTTGTTTGTCTAG+TGG | + | chr8.4:33366231-33366250 | None:intergenic | 35.0% |
| !! | GGTTGTTTTGTACTACTAAC+AGG | + | chr8.4:33366267-33366286 | None:intergenic | 35.0% |
| !! | GTTATGGGTTTGTTAGAAGT+AGG | + | chr8.4:33366144-33366163 | None:intergenic | 35.0% |
| !!! | AGAGAAACAGGTGCTTTTTT+GGG | + | chr8.4:33367011-33367030 | None:intergenic | 35.0% |
| !!! | GTTGTTGGAGGTTTTGATTT+TGG | + | chr8.4:33366861-33366880 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCTCTTGTGCTTG+TGG | + | chr8.4:33367364-33367383 | None:intergenic | 35.0% |
| !!! | TAGAGAAACAGGTGCTTTTT+TGG | + | chr8.4:33367012-33367031 | None:intergenic | 35.0% |
| !!! | TTTTTTCTCTTGTGCTTGTG+GGG | + | chr8.4:33367362-33367381 | None:intergenic | 35.0% |
| ACAAACGGTGAAGTTGTACT+TGG | + | chr8.4:33365835-33365854 | None:intergenic | 40.0% | |
| ACTACAGTGAGTTCAGATGA+GGG | - | chr8.4:33367500-33367519 | MS.gene97958:CDS | 40.0% | |
| AGCTGTTGGAGTTGTAACTT+TGG | + | chr8.4:33366727-33366746 | None:intergenic | 40.0% | |
| CTTAATGCTGGTGTAACCTT+TGG | + | chr8.4:33366945-33366964 | None:intergenic | 40.0% | |
| GAACTTGAACTTGTAGGTTC+TGG | + | chr8.4:33367431-33367450 | None:intergenic | 40.0% | |
| GACACACAACAAAATGGCAA+TGG | + | chr8.4:33367822-33367841 | None:intergenic | 40.0% | |
| GCTGTTGGAGTTGTAACTTT+GGG | + | chr8.4:33366726-33366745 | None:intergenic | 40.0% | |
| GTATTATCATCAGCTAGTGG+TGG | + | chr8.4:33367482-33367501 | None:intergenic | 40.0% | |
| GTTGTACTTGGCAAATTGGA+AGG | + | chr8.4:33365823-33365842 | None:intergenic | 40.0% | |
| TAAACAACAGCCTATTGTGG+CGG | - | chr8.4:33366029-33366048 | MS.gene97958:intron | 40.0% | |
| TACTACAGTGAGTTCAGATG+AGG | - | chr8.4:33367499-33367518 | MS.gene97958:CDS | 40.0% | |
| TCCAAAAGTTGCAACTCCAA+CGG | - | chr8.4:33366677-33366696 | MS.gene97958:CDS | 40.0% | |
| TGCTAAAAAACCACCTACTG+TGG | - | chr8.4:33366428-33366447 | MS.gene97958:CDS | 40.0% | |
| TGGAGAAAGATGTTGTCAAC+CGG | - | chr8.4:33367788-33367807 | MS.gene97958:CDS | 40.0% | |
| TTGTTTGTCTAGTGGCAATG+TGG | + | chr8.4:33366223-33366242 | None:intergenic | 40.0% | |
| ! | ACAGGTGGTATAGATAATGG+TGG | + | chr8.4:33367035-33367054 | None:intergenic | 40.0% |
| ! | GATAATGGTGGTAGAGAAAC+AGG | + | chr8.4:33367023-33367042 | None:intergenic | 40.0% |
| ! | GATGTTGGAGTTGTAGCTTT+TGG | + | chr8.4:33366771-33366790 | None:intergenic | 40.0% |
| ! | GGTGCTTTCTTTTTGTGTGT+AGG | + | chr8.4:33367170-33367189 | None:intergenic | 40.0% |
| ! | GTTGGTTGTTTGCTAGACAA+GGG | + | chr8.4:33366465-33366484 | None:intergenic | 40.0% |
| ! | TTCTTTTTGTGTGTAGGTGC+TGG | + | chr8.4:33367164-33367183 | None:intergenic | 40.0% |
| ! | TTGGTTGTTTGCTAGACAAG+GGG | + | chr8.4:33366464-33366483 | None:intergenic | 40.0% |
| ! | TTTGGAACTGGTGGTTTCAA+AGG | + | chr8.4:33366798-33366817 | None:intergenic | 40.0% |
| !! | GAAGGAACTGGTGATGATTT+TGG | + | chr8.4:33367251-33367270 | None:intergenic | 40.0% |
| !! | GGTTGTTGTTTCGCTACAAA+CGG | + | chr8.4:33365850-33365869 | None:intergenic | 40.0% |
| !! | GTGTGATTGAGCATTGATTG+AGG | + | chr8.4:33365791-33365810 | None:intergenic | 40.0% |
| !! | TTCTTTTTGTGTGTTGGTGC+TGG | + | chr8.4:33367224-33367243 | None:intergenic | 40.0% |
| !!! | GGAGGTTTTGATTTTGGAAC+TGG | + | chr8.4:33366855-33366874 | None:intergenic | 40.0% |
| !!! | GGTTTTGATTTTGGAACTGG+TGG | + | chr8.4:33366852-33366871 | None:intergenic | 40.0% |
| !!! | TTTTGGAACTGGTGACTTCA+CGG | + | chr8.4:33366619-33366638 | None:intergenic | 40.0% |
| AATGGCAATGGCAAGTACAC+CGG | + | chr8.4:33367810-33367829 | None:intergenic | 45.0% | |
| ACCAGCTTCTAAACCACCAA+AGG | - | chr8.4:33367079-33367098 | MS.gene97958:CDS | 45.0% | |
| AGATATTACCGCACTAGGAC+TGG | + | chr8.4:33367540-33367559 | None:intergenic | 45.0% | |
| CAAACAACAGCCTATTGTGG+CGG | - | chr8.4:33365984-33366003 | MS.gene97958:intron | 45.0% | |
| CAAACCCATAACCACAGTCA+CGG | - | chr8.4:33366152-33366171 | MS.gene97958:CDS | 45.0% | |
| CGGCATAATCTAGACCAAAG+AGG | + | chr8.4:33367603-33367622 | None:intergenic | 45.0% | |
| GATATTACCGCACTAGGACT+GGG | + | chr8.4:33367539-33367558 | None:intergenic | 45.0% | |
| GATGCTGGAGACGTAACTTT+AGG | + | chr8.4:33366546-33366565 | None:intergenic | 45.0% | |
| GATTTGACAGGAGCAGTTGT+TGG | + | chr8.4:33366876-33366895 | None:intergenic | 45.0% | |
| GCAGATGGTGTACTAGAAGT+TGG | + | chr8.4:33366408-33366427 | None:intergenic | 45.0% | |
| GGTGTGTCTATTGTAGGTGT+TGG | + | chr8.4:33367302-33367321 | None:intergenic | 45.0% | |
| GGTTTAGAAGCTGGTGGTAA+TGG | + | chr8.4:33367074-33367093 | None:intergenic | 45.0% | |
| GTTGCCAACCACAAATCCAT+CGG | - | chr8.4:33365939-33365958 | MS.gene97958:intron | 45.0% | |
| TTCTAACAAACCCACAGCCA+CGG | - | chr8.4:33365894-33365913 | MS.gene97958:intron | 45.0% | |
| TTGTCTAGTGGCAATGTGGA+AGG | + | chr8.4:33366219-33366238 | None:intergenic | 45.0% | |
| TTTGTGGTTGGCAACTTCGA+TGG | + | chr8.4:33365934-33365953 | None:intergenic | 45.0% | |
| ! | AACTTCACAGGAGCGAGTTT+TGG | + | chr8.4:33366915-33366934 | None:intergenic | 45.0% |
| ! | AATGGTGGAAGTGAAACAGG+TGG | + | chr8.4:33367050-33367069 | None:intergenic | 45.0% |
| ! | ACCGTTGGAGTTGCAACTTT+TGG | + | chr8.4:33366681-33366700 | None:intergenic | 45.0% |
| ! | ACCTTTGGTGGTTTAGAAGC+TGG | + | chr8.4:33367083-33367102 | None:intergenic | 45.0% |
| ! | ACTGGTGATTTTACAGGGCT+TGG | + | chr8.4:33366522-33366541 | None:intergenic | 45.0% |
| ! | GGAGACGTAACTTTAGGAAC+TGG | + | chr8.4:33366540-33366559 | None:intergenic | 45.0% |
| ! | GGTAATGGTGGAAGTGAAAC+AGG | + | chr8.4:33367053-33367072 | None:intergenic | 45.0% |
| ! | GGTTGGTTGTTTGCTAGACA+AGG | + | chr8.4:33366466-33366485 | None:intergenic | 45.0% |
| ! | GGTTTCACAGGAGAAGGTTT+TGG | + | chr8.4:33366831-33366850 | None:intergenic | 45.0% |
| ! | GTGGTTGAATTCTAGGGGAT+GGG | + | chr8.4:33366977-33366996 | None:intergenic | 45.0% |
| ! | GTTGTAACTTTGGGAACCAG+TGG | + | chr8.4:33366717-33366736 | None:intergenic | 45.0% |
| ! | TCTGGAACTGGTGATTTGAC+AGG | + | chr8.4:33366888-33366907 | None:intergenic | 45.0% |
| ! | TGGTTGAATTCTAGGGGATG+GGG | + | chr8.4:33366976-33366995 | None:intergenic | 45.0% |
| ! | TGGTTGTTTGCTAGACAAGG+GGG | + | chr8.4:33366463-33366482 | None:intergenic | 45.0% |
| ! | TTTGGAACTGGTGACTTCAC+GGG | + | chr8.4:33366618-33366637 | None:intergenic | 45.0% |
| ! | TTTGGAACTGGTGGTTTCAC+AGG | + | chr8.4:33366663-33366682 | None:intergenic | 45.0% |
| ! | TTTGGTGGTTTAGAAGCTGG+TGG | + | chr8.4:33367080-33367099 | None:intergenic | 45.0% |
| !! | AATTCTAGGGGATGGGGTTT+TGG | + | chr8.4:33366970-33366989 | None:intergenic | 45.0% |
| !! | ATTCTAGGGGATGGGGTTTT+GGG | + | chr8.4:33366969-33366988 | None:intergenic | 45.0% |
| !! | GAAGCTGGTGGTAATGGTAA+TGG | + | chr8.4:33367068-33367087 | None:intergenic | 45.0% |
| !! | GAGCATTGATTGAGGCTAGA+GGG | + | chr8.4:33365783-33365802 | None:intergenic | 45.0% |
| !! | GCTGTGGGTTTGTTAGAAGT+AGG | + | chr8.4:33365892-33365911 | None:intergenic | 45.0% |
| !! | GGGTTTGTTAGAAGTAGGAG+AGG | + | chr8.4:33365887-33365906 | None:intergenic | 45.0% |
| !! | GTCGAGGGTTTGTTAGAAGT+AGG | + | chr8.4:33366306-33366325 | None:intergenic | 45.0% |
| !! | GTGGTGGTGGTTGAATTCTA+GGG | + | chr8.4:33366983-33367002 | None:intergenic | 45.0% |
| !! | TCTATTGTAGGTGTTGGTGC+AGG | + | chr8.4:33367296-33367315 | None:intergenic | 45.0% |
| !! | TGAGCATTGATTGAGGCTAG+AGG | + | chr8.4:33365784-33365803 | None:intergenic | 45.0% |
| !! | TGGTGGTGGTTGAATTCTAG+GGG | + | chr8.4:33366982-33367001 | None:intergenic | 45.0% |
| !! | TGTGGTGGTGGTTGAATTCT+AGG | + | chr8.4:33366984-33367003 | None:intergenic | 45.0% |
| !!! | AGTTTTGGAGGATCTGGAAC+TGG | + | chr8.4:33366900-33366919 | None:intergenic | 45.0% |
| !!! | GAAACAGGTGCTTTTTTGGG+TGG | + | chr8.4:33367008-33367027 | None:intergenic | 45.0% |
| !!! | GGAGTTGCAACTTTTGGAAC+TGG | + | chr8.4:33366675-33366694 | None:intergenic | 45.0% |
| !!! | GGTGGTTTTTTAGCAGCAGA+TGG | + | chr8.4:33366423-33366442 | None:intergenic | 45.0% |
| !!! | GTTGCAACTTTTGGAACTGG+TGG | + | chr8.4:33366672-33366691 | None:intergenic | 45.0% |
| AACTGGTGGTTTCACAGGAG+AGG | + | chr8.4:33366658-33366677 | None:intergenic | 50.0% | |
| ACAGGAGTTGCTGCCACAAT+AGG | + | chr8.4:33366249-33366268 | None:intergenic | 50.0% | |
| ACTGGTGGTTTCACAGGAGA+AGG | + | chr8.4:33366657-33366676 | None:intergenic | 50.0% | |
| AGAATTGCTGGGGAAGGAAC+TGG | + | chr8.4:33367263-33367282 | None:intergenic | 50.0% | |
| CGCACCAGACAAAGAAACAC+CGG | - | chr8.4:33367196-33367215 | MS.gene97958:CDS | 50.0% | |
| CGGTGTTTCTTTGTCTGGTG+CGG | + | chr8.4:33367198-33367217 | None:intergenic | 50.0% | |
| GAAGTAGGAGAAGTTGCTGC+AGG | + | chr8.4:33365877-33365896 | None:intergenic | 50.0% | |
| GAAGTTGCTACCACAGTAGG+TGG | + | chr8.4:33366441-33366460 | None:intergenic | 50.0% | |
| GATTTCACAGGTGCAGCTGT+TGG | + | chr8.4:33366741-33366760 | None:intergenic | 50.0% | |
| GGAGAAGTTGCTGCTACAAC+AGG | + | chr8.4:33365871-33365890 | None:intergenic | 50.0% | |
| GGTGTTTCTTTGTCTGGTGC+GGG | + | chr8.4:33367197-33367216 | None:intergenic | 50.0% | |
| TGTGAAGTTGCCAGTCCCAA+AGG | - | chr8.4:33366926-33366945 | MS.gene97958:CDS | 50.0% | |
| TGTTGGCAACTTGGAAGGTG+CGG | + | chr8.4:33366376-33366395 | None:intergenic | 50.0% | |
| TTCGTGGTTGGCAACTTCGA+TGG | + | chr8.4:33366186-33366205 | None:intergenic | 50.0% | |
| TTGACAGGAGCAGTTGTTGG+AGG | + | chr8.4:33366873-33366892 | None:intergenic | 50.0% | |
| TTGAGGCTAGAGGGTAGCAT+AGG | + | chr8.4:33365774-33365793 | None:intergenic | 50.0% | |
| TTTCTCTTGTGCTTGTGGGG+TGG | + | chr8.4:33367359-33367378 | None:intergenic | 50.0% | |
| TTTGGTACCTTTGCAGGTGC+TGG | + | chr8.4:33367110-33367129 | None:intergenic | 50.0% | |
| ! | GATGATTTTGCAGCTGCAGG+TGG | + | chr8.4:33366498-33366517 | None:intergenic | 50.0% |
| ! | GCTGTTGGAGTCGTAGCTTT+TGG | + | chr8.4:33366636-33366655 | None:intergenic | 50.0% |
| ! | GGAGATGATTTTGCAGCTGC+AGG | + | chr8.4:33366501-33366520 | None:intergenic | 50.0% |
| ! | GGTGCTTTTGGTACCTTTGC+AGG | + | chr8.4:33367116-33367135 | None:intergenic | 50.0% |
| ! | GGTGGTTGAATTCTAGGGGA+TGG | + | chr8.4:33366978-33366997 | None:intergenic | 50.0% |
| ! | GGTTCTGGTGCATCATCTTC+AGG | + | chr8.4:33367335-33367354 | None:intergenic | 50.0% |
| ! | GGTTTCAAAGGCGCAGATGT+TGG | + | chr8.4:33366786-33366805 | None:intergenic | 50.0% |
| ! | TGAAGGGTCCGATGGATTTG+TGG | + | chr8.4:33365950-33365969 | None:intergenic | 50.0% |
| ! | TTTGGGACTGGCAACTTCAC+AGG | + | chr8.4:33366927-33366946 | None:intergenic | 50.0% |
| !! | ACAGGAGAAGGTTTTGGTGC+GGG | + | chr8.4:33366825-33366844 | None:intergenic | 50.0% |
| !! | CACAGGAGAAGGTTTTGGTG+CGG | + | chr8.4:33366826-33366845 | None:intergenic | 50.0% |
| !! | GCTGGTGGTAATGGTAATGG+TGG | + | chr8.4:33367065-33367084 | None:intergenic | 50.0% |
| !! | GGTGCTGGTGTGTCTATTGT+AGG | + | chr8.4:33367308-33367327 | None:intergenic | 50.0% |
| !! | GTGATGGTGGGAGAATTGCT+GGG | + | chr8.4:33367274-33367293 | None:intergenic | 50.0% |
| !! | TGATGGTGGGAGAATTGCTG+GGG | + | chr8.4:33367273-33367292 | None:intergenic | 50.0% |
| !! | TTCACAGGAGCGAGTTTTGG+AGG | + | chr8.4:33366912-33366931 | None:intergenic | 50.0% |
| !! | TTGGGAACCAGTGGTTTTGC+AGG | + | chr8.4:33366708-33366727 | None:intergenic | 50.0% |
| !!! | GCTTTTTTGGGTGGATGTGG+TGG | + | chr8.4:33366999-33367018 | None:intergenic | 50.0% |
| !!! | GGAGTCGTAGCTTTTGGAAC+TGG | + | chr8.4:33366630-33366649 | None:intergenic | 50.0% |
| !!! | GGGGTTTTGGGACTTAATGC+TGG | + | chr8.4:33366957-33366976 | None:intergenic | 50.0% |
| !!! | GGTGCTTTTTTGGGTGGATG+TGG | + | chr8.4:33367002-33367021 | None:intergenic | 50.0% |
| !!! | TTTTTGGGTGGATGTGGTGG+TGG | + | chr8.4:33366996-33367015 | None:intergenic | 50.0% |
| AGATGTCGGAGTCGCGACTT+TGG | + | chr8.4:33366592-33366611 | None:intergenic | 55.0% | |
| AGCTGCCGTGACTGTGGTTA+TGG | + | chr8.4:33366160-33366179 | None:intergenic | 55.0% | |
| ATGTCGGAGTCGCGACTTTG+GGG | + | chr8.4:33366590-33366609 | None:intergenic | 55.0% | |
| CGAAGCTGCTGTTGGCAACT+TGG | + | chr8.4:33366385-33366404 | None:intergenic | 55.0% | |
| GAAGTAGGAGAGGTTGCTGC+TGG | + | chr8.4:33366291-33366310 | None:intergenic | 55.0% | |
| GAAGTTGGCGAAGCTGCTGT+TGG | + | chr8.4:33366393-33366412 | None:intergenic | 55.0% | |
| GACTTCACAGGGGAAGATGC+TGG | + | chr8.4:33366561-33366580 | None:intergenic | 55.0% | |
| GACTTCACGGGAGCAGATGT+CGG | + | chr8.4:33366606-33366625 | None:intergenic | 55.0% | |
| GATGTCGGAGTCGCGACTTT+GGG | + | chr8.4:33366591-33366610 | None:intergenic | 55.0% | |
| GCAGGAGTTGCTGCCACAAT+AGG | + | chr8.4:33365997-33366016 | None:intergenic | 55.0% | |
| GCTGCCGTGACTGTGGTTAT+GGG | + | chr8.4:33366159-33366178 | None:intergenic | 55.0% | |
| GCTGCTGTTGGCAACTTGGA+AGG | + | chr8.4:33366381-33366400 | None:intergenic | 55.0% | |
| GGGGAAGTTGCTACCACAGT+AGG | + | chr8.4:33366444-33366463 | None:intergenic | 55.0% | |
| GGTATCACCAGCACCTGCAA+AGG | - | chr8.4:33367100-33367119 | MS.gene97958:CDS | 55.0% | |
| GGTGCATCATCTTCAGGTGC+TGG | + | chr8.4:33367329-33367348 | None:intergenic | 55.0% | |
| GGTGCGGCAGGGATTATAGT+TGG | + | chr8.4:33366360-33366379 | None:intergenic | 55.0% | |
| GGTTGCACCTGCAAAACCAC+TGG | - | chr8.4:33366698-33366717 | MS.gene97958:CDS | 55.0% | |
| GGTTTCACAGGAGAGGCTGT+TGG | + | chr8.4:33366651-33366670 | None:intergenic | 55.0% | |
| TGGGGACAGGTGACTTCACA+GGG | + | chr8.4:33366572-33366591 | None:intergenic | 55.0% | |
| TTGGGGACAGGTGACTTCAC+AGG | + | chr8.4:33366573-33366592 | None:intergenic | 55.0% | |
| ! | ATCAGCTAGTGGTGGTGCTG+GGG | + | chr8.4:33367474-33367493 | None:intergenic | 55.0% |
| ! | CATCAGCTAGTGGTGGTGCT+GGG | + | chr8.4:33367475-33367494 | None:intergenic | 55.0% |
| ! | GGAAGGTGCAGATGGATTCG+TGG | + | chr8.4:33366202-33366221 | None:intergenic | 55.0% |
| ! | GGCAATGTGGAAGGTGCAGA+TGG | + | chr8.4:33366210-33366229 | None:intergenic | 55.0% |
| ! | GGGTCCGATGGATTTGTGGT+TGG | + | chr8.4:33365946-33365965 | None:intergenic | 55.0% |
| ! | GGTGCAGATGGATTCGTGGT+TGG | + | chr8.4:33366198-33366217 | None:intergenic | 55.0% |
| ! | GGTTTTGCAGGTGCAACCGT+TGG | + | chr8.4:33366696-33366715 | None:intergenic | 55.0% |
| ! | GTGTTGGTGCAGGTGATGGT+GGG | + | chr8.4:33367286-33367305 | None:intergenic | 55.0% |
| ! | TCATCAGCTAGTGGTGGTGC+TGG | + | chr8.4:33367476-33367495 | None:intergenic | 55.0% |
| !! | GCAGGTGCTGGTGATACCTT+TGG | + | chr8.4:33367098-33367117 | None:intergenic | 55.0% |
| !! | GCTGGTGTAACCTTTGGGAC+TGG | + | chr8.4:33366939-33366958 | None:intergenic | 55.0% |
| !! | GGCTGCAGTGTTTTGGGCAT+TGG | - | chr8.4:33365738-33365757 | MS.gene97958:CDS | 55.0% |
| !! | GGTACCAAAAGCACCAGCAC+CGG | - | chr8.4:33367121-33367140 | MS.gene97958:CDS | 55.0% |
| !! | GGTGATGGTGGGAGAATTGC+TGG | + | chr8.4:33367275-33367294 | None:intergenic | 55.0% |
| !! | GGTGCCGGTGTTTCTTTGTC+TGG | + | chr8.4:33367203-33367222 | None:intergenic | 55.0% |
| !! | GGTGCTGGTGATACCTTTGG+TGG | + | chr8.4:33367095-33367114 | None:intergenic | 55.0% |
| !! | GGTTTTGGTGCGGGAGCTTT+TGG | + | chr8.4:33366816-33366835 | None:intergenic | 55.0% |
| !! | GTAGGTGTTGGTGCAGGTGA+TGG | + | chr8.4:33367290-33367309 | None:intergenic | 55.0% |
| !! | TCATCTTCAGGTGCTGGTGC+TGG | + | chr8.4:33367323-33367342 | None:intergenic | 55.0% |
| !! | TGCTGGTGCTGGTGCTTCTT+TGG | + | chr8.4:33367147-33367166 | None:intergenic | 55.0% |
| !! | TTGTGTGTAGGTGCTGGTGC+TGG | + | chr8.4:33367158-33367177 | None:intergenic | 55.0% |
| !! | TTGTGTGTTGGTGCTGGTGC+CGG | + | chr8.4:33367218-33367237 | None:intergenic | 55.0% |
| !!! | GGAGCGAGTTTTGGAGGATC+TGG | + | chr8.4:33366906-33366925 | None:intergenic | 55.0% |
| ACCAGCACCCAGTCCTAGTG+CGG | - | chr8.4:33367529-33367548 | MS.gene97958:CDS | 60.0% | |
| AGCTGCAGGTGGTTGAGTGG+TGG | + | chr8.4:33366487-33366506 | None:intergenic | 60.0% | |
| CAAACCCACAGCCACGGTCA+CGG | - | chr8.4:33365900-33365919 | MS.gene97958:intron | 60.0% | |
| CTCTTGTGCTTGTGGGGTGG+TGG | + | chr8.4:33367356-33367375 | None:intergenic | 60.0% | |
| GCAGGAGTTGCCGCCACAAT+AGG | + | chr8.4:33366042-33366061 | None:intergenic | 60.0% | |
| GCAGGTGGTTGAGTGGTGGT+TGG | + | chr8.4:33366483-33366502 | None:intergenic | 60.0% | |
| GCTGCTGAGATCGTGGTCGA+GGG | + | chr8.4:33366321-33366340 | None:intergenic | 60.0% | |
| GGGGACAGGTGACTTCACAG+GGG | + | chr8.4:33366571-33366590 | None:intergenic | 60.0% | |
| GGTGGGAGAATTGCTGGGGA+AGG | + | chr8.4:33367269-33367288 | None:intergenic | 60.0% | |
| GTAGGAGAGGTTGCTGCTGG+TGG | + | chr8.4:33366288-33366307 | None:intergenic | 60.0% | |
| TCTTTGTCTGGTGCGGGTGC+TGG | + | chr8.4:33367191-33367210 | None:intergenic | 60.0% | |
| TGCAGCTGCAGGTGGTTGAG+TGG | + | chr8.4:33366490-33366509 | None:intergenic | 60.0% | |
| TGCTGCTGAGATCGTGGTCG+AGG | + | chr8.4:33366322-33366341 | None:intergenic | 60.0% | |
| ! | GCAACTTGGAAGGTGCGGCA+GGG | + | chr8.4:33366371-33366390 | None:intergenic | 60.0% |
| ! | GGCAGTGTTGAAGGGTCCGA+TGG | + | chr8.4:33365958-33365977 | None:intergenic | 60.0% |
| ! | TCAGCTAGTGGTGGTGCTGG+GGG | + | chr8.4:33367473-33367492 | None:intergenic | 60.0% |
| ! | TGCTTGTGGGGTGGTGGTTC+TGG | + | chr8.4:33367350-33367369 | None:intergenic | 60.0% |
| !! | CTAGGACTGGGTGCTGGTGA+TGG | + | chr8.4:33367527-33367546 | None:intergenic | 60.0% |
| !! | GGTGCTGGTGCTTCTTTGGC+CGG | + | chr8.4:33367143-33367162 | None:intergenic | 60.0% |
| !! | GGTGTTGGTGCAGGTGATGG+TGG | + | chr8.4:33367287-33367306 | None:intergenic | 60.0% |
| !! | TGGTGCTGCTGCTGAGATCG+TGG | + | chr8.4:33366328-33366347 | None:intergenic | 60.0% |
| !!! | GCGGGAGCTTTTGGAACTGG+TGG | + | chr8.4:33366807-33366826 | None:intergenic | 60.0% |
| !!! | GGTGCGGGAGCTTTTGGAAC+TGG | + | chr8.4:33366810-33366829 | None:intergenic | 60.0% |
| !!! | TTGGCCGGTGCTGGTGCTTT+TGG | + | chr8.4:33367128-33367147 | None:intergenic | 60.0% |
| ACCGCACTAGGACTGGGTGC+TGG | + | chr8.4:33367533-33367552 | None:intergenic | 65.0% | |
| GGTGCTTCTTTGGCCGGTGC+TGG | + | chr8.4:33367137-33367156 | None:intergenic | 65.0% | |
| TGGTGCAGCTGCCGTGACTG+TGG | + | chr8.4:33366166-33366185 | None:intergenic | 65.0% | |
| ! | GGAGTCGCGACTTTGGGGAC+AGG | + | chr8.4:33366585-33366604 | None:intergenic | 65.0% |
| ! | GGCAACTTGGAAGGTGCGGC+AGG | + | chr8.4:33366372-33366391 | None:intergenic | 65.0% |
| AGCTGCCGTGACCGTGGCTG+TGG | + | chr8.4:33365908-33365927 | None:intergenic | 70.0% | |
| GCTGCCGTGACCGTGGCTGT+GGG | + | chr8.4:33365907-33365926 | None:intergenic | 70.0% | |
| TGGTGCAGCTGCCGTGACCG+TGG | + | chr8.4:33365914-33365933 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 33365736 | 33367847 | 33365736 | ID=MS.gene97958 |
| chr8.4 | mRNA | 33365736 | 33367847 | 33365736 | ID=MS.gene97958.t1;Parent=MS.gene97958 |
| chr8.4 | exon | 33366033 | 33367847 | 33366033 | ID=MS.gene97958.t1.exon1;Parent=MS.gene97958.t1 |
| chr8.4 | CDS | 33366033 | 33367847 | 33366033 | ID=cds.MS.gene97958.t1;Parent=MS.gene97958.t1 |
| chr8.4 | exon | 33365736 | 33365822 | 33365736 | ID=MS.gene97958.t1.exon2;Parent=MS.gene97958.t1 |
| chr8.4 | CDS | 33365736 | 33365822 | 33365736 | ID=cds.MS.gene97958.t1;Parent=MS.gene97958.t1 |
| Gene Sequence |
| Protein sequence |
