Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97961.t1 | XP_013446199.1 | 93.9 | 781 | 6 | 2 | 1 | 739 | 1 | 781 | 0.00E+00 | 1434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97961.t1 | Q93ZF5 | 66.3 | 790 | 208 | 9 | 1 | 738 | 1 | 784 | 3.7e-291 | 1001.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97961.t1 | A0A072TSP3 | 93.9 | 781 | 6 | 2 | 1 | 739 | 1 | 781 | 0.0e+00 | 1434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056473 | MS.gene97961 | 0.844499 | 7.28E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97961.t1 | MTR_8g069955 | 93.854 | 781 | 6 | 2 | 1 | 739 | 1 | 781 | 0.0 | 1501 |
| MS.gene97961.t1 | MTR_8g069955 | 93.609 | 751 | 6 | 2 | 1 | 709 | 1 | 751 | 0.0 | 1436 |
| MS.gene97961.t1 | MTR_8g069955 | 93.201 | 706 | 6 | 2 | 1 | 664 | 1 | 706 | 0.0 | 1344 |
| MS.gene97961.t1 | MTR_1g075640 | 46.231 | 796 | 344 | 9 | 1 | 737 | 1 | 771 | 0.0 | 711 |
| MS.gene97961.t1 | MTR_1g041695 | 45.350 | 785 | 368 | 9 | 1 | 737 | 1 | 772 | 0.0 | 682 |
| MS.gene97961.t1 | MTR_7g011350 | 34.211 | 798 | 443 | 18 | 2 | 739 | 1 | 776 | 2.86e-141 | 434 |
| MS.gene97961.t1 | MTR_5g042150 | 33.123 | 794 | 445 | 14 | 4 | 737 | 3 | 770 | 3.57e-141 | 433 |
| MS.gene97961.t1 | MTR_2g045780 | 34.719 | 818 | 431 | 24 | 2 | 739 | 1 | 795 | 5.91e-141 | 433 |
| MS.gene97961.t1 | MTR_7g011330 | 35.776 | 805 | 421 | 22 | 2 | 739 | 1 | 776 | 1.51e-138 | 427 |
| MS.gene97961.t1 | MTR_7g011330 | 35.732 | 806 | 423 | 22 | 2 | 739 | 1 | 779 | 1.98e-138 | 426 |
| MS.gene97961.t1 | MTR_2g045780 | 32.882 | 739 | 399 | 21 | 2 | 664 | 1 | 718 | 2.72e-110 | 351 |
| MS.gene97961.t1 | MTR_7g011280 | 40.500 | 400 | 228 | 7 | 347 | 739 | 30 | 426 | 2.03e-96 | 305 |
| MS.gene97961.t1 | MTR_6g034015 | 44.693 | 179 | 75 | 5 | 583 | 739 | 2 | 178 | 7.18e-42 | 150 |
| MS.gene97961.t1 | MTR_7g011310 | 30.100 | 402 | 198 | 11 | 2 | 345 | 1 | 377 | 1.52e-33 | 133 |
| MS.gene97961.t1 | MTR_2g088870 | 30.564 | 337 | 211 | 11 | 390 | 713 | 111 | 437 | 3.31e-25 | 110 |
| MS.gene97961.t1 | MTR_2g088870 | 30.564 | 337 | 209 | 12 | 390 | 713 | 111 | 435 | 1.04e-23 | 105 |
| MS.gene97961.t1 | MTR_7g076560 | 28.955 | 335 | 219 | 12 | 390 | 713 | 76 | 402 | 4.43e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97961.t1 | AT1G68740 | 66.625 | 791 | 205 | 10 | 1 | 739 | 1 | 784 | 0.0 | 1020 |
| MS.gene97961.t1 | AT1G68740 | 64.385 | 716 | 197 | 9 | 1 | 664 | 1 | 710 | 0.0 | 889 |
| MS.gene97961.t1 | AT3G23430 | 44.875 | 800 | 347 | 11 | 1 | 731 | 1 | 775 | 0.0 | 684 |
| MS.gene97961.t1 | AT3G29060 | 38.081 | 688 | 356 | 11 | 65 | 734 | 159 | 794 | 1.13e-147 | 451 |
| MS.gene97961.t1 | AT1G26730 | 36.526 | 783 | 415 | 15 | 2 | 738 | 1 | 747 | 3.42e-143 | 438 |
| MS.gene97961.t1 | AT1G35350 | 35.959 | 787 | 415 | 18 | 2 | 738 | 1 | 748 | 6.34e-143 | 437 |
| MS.gene97961.t1 | AT1G14040 | 33.971 | 836 | 427 | 19 | 2 | 738 | 1 | 810 | 5.42e-141 | 434 |
| MS.gene97961.t1 | AT4G25350 | 34.443 | 781 | 428 | 10 | 2 | 738 | 1 | 741 | 1.02e-140 | 431 |
| MS.gene97961.t1 | AT1G69480 | 33.375 | 797 | 434 | 16 | 2 | 732 | 1 | 766 | 7.46e-137 | 422 |
| MS.gene97961.t1 | AT1G69480 | 33.375 | 797 | 434 | 16 | 2 | 732 | 1 | 766 | 7.46e-137 | 422 |
| MS.gene97961.t1 | AT2G03260 | 35.319 | 705 | 401 | 12 | 66 | 738 | 123 | 804 | 5.22e-131 | 408 |
| MS.gene97961.t1 | AT1G35350 | 41.715 | 513 | 293 | 6 | 229 | 738 | 55 | 564 | 1.39e-128 | 394 |
| MS.gene97961.t1 | AT2G03260 | 36.842 | 608 | 349 | 10 | 149 | 738 | 1 | 591 | 1.02e-125 | 387 |
| MS.gene97961.t1 | AT2G03240 | 38.953 | 516 | 306 | 5 | 229 | 738 | 308 | 820 | 1.48e-120 | 381 |
| MS.gene97961.t1 | AT1G26730 | 33.706 | 715 | 392 | 15 | 2 | 670 | 1 | 679 | 1.00e-108 | 347 |
| MS.gene97961.t1 | AT2G03250 | 32.922 | 729 | 396 | 20 | 2 | 673 | 1 | 693 | 1.80e-103 | 333 |
| MS.gene97961.t1 | AT2G03250 | 31.562 | 621 | 337 | 18 | 2 | 570 | 1 | 585 | 1.15e-74 | 253 |
| MS.gene97961.t1 | AT2G32295 | 28.767 | 365 | 235 | 16 | 390 | 739 | 98 | 452 | 4.38e-25 | 109 |
| MS.gene97961.t1 | AT2G32295 | 28.767 | 365 | 235 | 16 | 390 | 739 | 98 | 452 | 4.38e-25 | 109 |
| MS.gene97961.t1 | AT5G35730 | 28.177 | 362 | 231 | 12 | 390 | 739 | 102 | 446 | 7.42e-23 | 102 |
Find 133 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTTTCTGCCATATTAT+TGG | 0.182093 | 8.4:+33334932 | MS.gene97961:CDS |
| ACAAAAGCTTCTTTCCATTC+TGG | 0.212257 | 8.4:-33329800 | None:intergenic |
| GCTAAGGAGCCTAGAGTTTA+TGG | 0.215307 | 8.4:+33334822 | MS.gene97961:CDS |
| TATTAACCTTATTGAGGTTT+TGG | 0.228739 | 8.4:-33330217 | None:intergenic |
| TTTCTACATTTCTTCCTCTA+TGG | 0.229554 | 8.4:+33334006 | MS.gene97961:CDS |
| GACTATTTACTGGATGCTTT+TGG | 0.234826 | 8.4:+33333738 | MS.gene97961:CDS |
| TTCCTTGCCCACTAAGAAAA+TGG | 0.237152 | 8.4:-33331536 | None:intergenic |
| TCATCCACATTCTCTATTAA+TGG | 0.250415 | 8.4:+33330389 | MS.gene97961:CDS |
| TTTCCATGTAGAGTGAATTT+TGG | 0.250966 | 8.4:-33333817 | None:intergenic |
| GCACAAGTTCAATTCCTTCT+TGG | 0.261445 | 8.4:+33334204 | MS.gene97961:CDS |
| GAGAAAGAGTTTCTTGATAG+AGG | 0.262919 | 8.4:+33330257 | MS.gene97961:CDS |
| ATGGCATGTTACTATATAAC+TGG | 0.266181 | 8.4:+33334841 | MS.gene97961:CDS |
| TGGTTTCATTGAGCTTTATA+AGG | 0.272211 | 8.4:+33331731 | MS.gene97961:CDS |
| TTGGGACTTTGTAAGGGATT+GGG | 0.277186 | 8.4:+33335229 | MS.gene97961:CDS |
| ATAAATTCAGGACTATTTAC+TGG | 0.286750 | 8.4:+33333728 | MS.gene97961:intron |
| ATTTCTTAACCAAGGATTCT+TGG | 0.294130 | 8.4:-33335270 | None:intergenic |
| GTGTGATAAGGAACATAATT+TGG | 0.298051 | 8.4:+33334421 | MS.gene97961:CDS |
| CATGCAATTACTTTCTTCAT+TGG | 0.303322 | 8.4:+33332946 | MS.gene97961:CDS |
| AATTGTATTGGGACTTTGTA+AGG | 0.308439 | 8.4:+33335222 | MS.gene97961:CDS |
| ACACGAAGCACACCACCTTC+TGG | 0.324304 | 8.4:-33331666 | None:intergenic |
| TGAGCTCAAATCTGCATTCA+TGG | 0.325797 | 8.4:+33330313 | MS.gene97961:CDS |
| TAGGATATTTGAATGATTAT+AGG | 0.326678 | 8.4:+33331757 | MS.gene97961:CDS |
| AACTTTGTACCAATTGTATT+GGG | 0.326926 | 8.4:+33335211 | MS.gene97961:CDS |
| TGCATTGCTCTCCAATAATA+TGG | 0.328656 | 8.4:-33334943 | None:intergenic |
| ATCTATTTACTACTTGTCTA+TGG | 0.338255 | 8.4:+33335313 | MS.gene97961:CDS |
| CAGAGAACAAACAGAGGATT+TGG | 0.338854 | 8.4:+33331422 | MS.gene97961:CDS |
| CAACTTTGTACCAATTGTAT+TGG | 0.342154 | 8.4:+33335210 | MS.gene97961:CDS |
| TTTAGACCAAAACCTCAATA+AGG | 0.348820 | 8.4:+33330211 | MS.gene97961:CDS |
| TGGGACTTTGTAAGGGATTG+GGG | 0.360028 | 8.4:+33335230 | MS.gene97961:CDS |
| ACCACTTCCTTTGTGTGATA+AGG | 0.361753 | 8.4:+33334409 | MS.gene97961:CDS |
| TCAACTACTTTGAGATAGAT+TGG | 0.368425 | 8.4:-33332229 | None:intergenic |
| ATAAATCAATGGATTTGAAA+TGG | 0.376768 | 8.4:+33331484 | MS.gene97961:CDS |
| AGGTATTAAACATTACTCTA+AGG | 0.384634 | 8.4:+33335768 | MS.gene97961:intron |
| AGAAATTAGTTACCTTGTAA+TGG | 0.385123 | 8.4:+33331608 | MS.gene97961:CDS |
| TAGCATCAGTGTCAGCAAAT+TGG | 0.391037 | 8.4:-33330169 | None:intergenic |
| AAGTTATTAGAAGAGGACTA+TGG | 0.394611 | 8.4:+33335873 | MS.gene97961:CDS |
| TTCTCCCTAGGTTCTGATGC+TGG | 0.401309 | 8.4:+33334560 | MS.gene97961:intron |
| ACAAATCACCTTATCAATCT+AGG | 0.401577 | 8.4:+33335086 | MS.gene97961:CDS |
| ATTGGGACTTTGTAAGGGAT+TGG | 0.402051 | 8.4:+33335228 | MS.gene97961:CDS |
| CATTTGACTCTACTCACAAA+AGG | 0.402742 | 8.4:+33334171 | MS.gene97961:CDS |
| AGAAAGAGTTTCTTGATAGA+GGG | 0.409944 | 8.4:+33330258 | MS.gene97961:CDS |
| TTTATCCTCTTCATTTGATT+CGG | 0.410402 | 8.4:-33331466 | None:intergenic |
| TAAATCAATGGATTTGAAAT+GGG | 0.413347 | 8.4:+33331485 | MS.gene97961:CDS |
| AAGGTAACTAATTTCTGAAA+AGG | 0.416741 | 8.4:-33331601 | None:intergenic |
| ACATTACTCTAAGGCTTGCT+TGG | 0.424324 | 8.4:+33335777 | MS.gene97961:CDS |
| TCATCCTCCACTTCATGAAA+AGG | 0.425572 | 8.4:-33336083 | None:intergenic |
| ATTACAGGTGGTGAAGTTCA+TGG | 0.430366 | 8.4:+33332828 | MS.gene97961:intron |
| ATTGAGCTTTATAAGGGCCT+AGG | 0.431124 | 8.4:+33331738 | MS.gene97961:CDS |
| AGCTATAAGACTCAAGACTA+TGG | 0.433500 | 8.4:+33334865 | MS.gene97961:CDS |
| GGGATTGGGGTTTGCTTCAA+AGG | 0.437085 | 8.4:+33335243 | MS.gene97961:CDS |
| GGTTTCATTGAGCTTTATAA+GGG | 0.440025 | 8.4:+33331732 | MS.gene97961:CDS |
| ATAAGGTTAATAAATTCTAT+AGG | 0.440648 | 8.4:+33330228 | MS.gene97961:CDS |
| GAAATTCTCTAAGCAATTTG+AGG | 0.442628 | 8.4:+33329766 | MS.gene97961:CDS |
| CATATTTGCCTAGATTGATA+AGG | 0.449824 | 8.4:-33335094 | None:intergenic |
| AAAGGAACTCCAAGAATCCT+TGG | 0.449952 | 8.4:+33335261 | MS.gene97961:CDS |
| GGCTGATCAACTTTGCAGTC+AGG | 0.450379 | 8.4:+33334593 | MS.gene97961:CDS |
| ATGCAGAGGAAGACTCTGTT+AGG | 0.454624 | 8.4:+33331397 | MS.gene97961:intron |
| TTACAAAGTCCCAATACAAT+TGG | 0.458613 | 8.4:-33335220 | None:intergenic |
| GAAAGAGTTTCTTGATAGAG+GGG | 0.460793 | 8.4:+33330259 | MS.gene97961:CDS |
| TTCATGGATAAGAAAGGTAA+AGG | 0.465006 | 8.4:+33330329 | MS.gene97961:CDS |
| AGAATTTATTAACCTTATTG+AGG | 0.469370 | 8.4:-33330223 | None:intergenic |
| TTTCGAGATAGTTCCAACTA+AGG | 0.469743 | 8.4:+33334077 | MS.gene97961:CDS |
| TGCTAAAGGTGATCATAGAA+AGG | 0.471196 | 8.4:+33332882 | MS.gene97961:CDS |
| AATTTGGTCACCTCTTTACA+AGG | 0.480240 | 8.4:+33334437 | MS.gene97961:CDS |
| CTGTACTTTAGTTCCTTAGT+TGG | 0.482476 | 8.4:-33334090 | None:intergenic |
| TGAGACAGATTCCTCCTCCT+TGG | 0.484421 | 8.4:-33330369 | None:intergenic |
| ATTTCTAGTGTGCAAGGAGA+TGG | 0.490178 | 8.4:+33335048 | MS.gene97961:intron |
| AACTCTAGGCTCCTTAGCAT+TGG | 0.493715 | 8.4:-33334817 | None:intergenic |
| CTTTATAGGTTCCAATGCTA+AGG | 0.494715 | 8.4:+33334806 | MS.gene97961:intron |
| GGTAAATTGAGGACATTATC+CGG | 0.496131 | 8.4:+33331513 | MS.gene97961:CDS |
| GGAAGTGGTAACGGCTTGAC+CGG | 0.497555 | 8.4:-33334395 | None:intergenic |
| TATAATCATTCAAATATCCT+AGG | 0.503873 | 8.4:-33331755 | None:intergenic |
| ACACCAAAATTCACTCTACA+TGG | 0.508165 | 8.4:+33333814 | MS.gene97961:CDS |
| GTTTCAGCTATGTTAGCTGC+AGG | 0.508558 | 8.4:+33335116 | MS.gene97961:CDS |
| TGACCGGTATATAATGTTGA+AGG | 0.508624 | 8.4:-33334379 | None:intergenic |
| ATCAATTCATTTCTTAACCA+AGG | 0.508898 | 8.4:-33335278 | None:intergenic |
| ATATTATTGGAGAGCAATGC+AGG | 0.511799 | 8.4:+33334945 | MS.gene97961:CDS |
| TCATGGATAAGAAAGGTAAA+GGG | 0.512773 | 8.4:+33330330 | MS.gene97961:CDS |
| ATTTGACTCTACTCACAAAA+GGG | 0.513008 | 8.4:+33334172 | MS.gene97961:CDS |
| GAGGACTATGGAATTTCTAC+AGG | 0.514396 | 8.4:+33335885 | MS.gene97961:CDS |
| GCACTTGAAGTTATTAGAAG+AGG | 0.514485 | 8.4:+33335866 | MS.gene97961:CDS |
| TGAACAAATCTTCCATTACA+AGG | 0.514803 | 8.4:-33331620 | None:intergenic |
| CATGAGCATCTAAATAATGC+TGG | 0.518926 | 8.4:+33336029 | MS.gene97961:CDS |
| GTTTGAGAAGGTGTTGTCAA+AGG | 0.521767 | 8.4:-33331579 | None:intergenic |
| ATGGATTTGAAATGGGAAGA+TGG | 0.530453 | 8.4:+33331492 | MS.gene97961:CDS |
| AAATTCTCTAAGCAATTTGA+GGG | 0.530514 | 8.4:+33329767 | MS.gene97961:CDS |
| ATTACCATTAATAGAGAATG+TGG | 0.531073 | 8.4:-33330393 | None:intergenic |
| AAATGAAGAGGATAAATCAA+TGG | 0.537080 | 8.4:+33331473 | MS.gene97961:CDS |
| CTTGTTTCATCAATTAGCAA+AGG | 0.538449 | 8.4:+33330119 | MS.gene97961:CDS |
| AGGGACAACTCATTCCAGAA+TGG | 0.545665 | 8.4:+33329786 | MS.gene97961:CDS |
| ATTTCTGAAAAGGTTTGAGA+AGG | 0.545715 | 8.4:-33331591 | None:intergenic |
| GAATCTTTATAAATGCAAGC+AGG | 0.546938 | 8.4:-33332065 | None:intergenic |
| CAATAATGTTGCAGCCATAG+AGG | 0.547217 | 8.4:-33334020 | None:intergenic |
| GTCCCTTCAACATTATATAC+CGG | 0.551905 | 8.4:+33334376 | MS.gene97961:CDS |
| TTCTCACTATTCCAAGGAGG+AGG | 0.553993 | 8.4:+33330358 | MS.gene97961:CDS |
| AGTAACATGCCATAAACTCT+AGG | 0.555517 | 8.4:-33334831 | None:intergenic |
| TCTGCATTCATGGATAAGAA+AGG | 0.557752 | 8.4:+33330323 | MS.gene97961:CDS |
| ATTGTATTGGGACTTTGTAA+GGG | 0.559765 | 8.4:+33335223 | MS.gene97961:CDS |
| GCAAGGAGATGGTTTGATGA+AGG | 0.560927 | 8.4:+33335059 | MS.gene97961:CDS |
| TTGCCCACTAAGAAAATGGC+CGG | 0.564116 | 8.4:-33331532 | None:intergenic |
| TGGCAAGTTTAGAGCAGTGA+AGG | 0.564530 | 8.4:+33336049 | MS.gene97961:CDS |
| AAACTGTCTACCCTGTGCTT+AGG | 0.566067 | 8.4:+33333837 | MS.gene97961:CDS |
| AAGGAGATGGTTTGATGAAG+GGG | 0.566540 | 8.4:+33335061 | MS.gene97961:CDS |
| TCCACTTCATGAAAAGGAAG+TGG | 0.569024 | 8.4:-33336077 | None:intergenic |
| TCCTTATCACACAAAGGAAG+TGG | 0.575379 | 8.4:-33334410 | None:intergenic |
| ACATACAAGTAATAGTAAGA+AGG | 0.577082 | 8.4:-33334355 | None:intergenic |
| CATGCAGAAAAGATGATCAA+AGG | 0.585159 | 8.4:+33331708 | MS.gene97961:CDS |
| TACAATGTCTATGACTGCTG+TGG | 0.588387 | 8.4:+33334131 | MS.gene97961:CDS |
| TCTCCAATAATATGGCAGAA+AGG | 0.590845 | 8.4:-33334935 | None:intergenic |
| AATGGGAAGATGGTAAATTG+AGG | 0.594587 | 8.4:+33331502 | MS.gene97961:CDS |
| GGTGAAGTTCATGGATGAAG+TGG | 0.595502 | 8.4:+33332837 | MS.gene97961:CDS |
| AAGGAATTGAACTTGTGCAT+AGG | 0.598938 | 8.4:-33334199 | None:intergenic |
| CAAGGAGATGGTTTGATGAA+GGG | 0.600063 | 8.4:+33335060 | MS.gene97961:CDS |
| ATGTCTATGACTGCTGTGGT+TGG | 0.604592 | 8.4:+33334135 | MS.gene97961:CDS |
| TGGCATGTTACTATATAACT+GGG | 0.604737 | 8.4:+33334842 | MS.gene97961:CDS |
| ATGGCTGCAACATTATTGCA+TGG | 0.604892 | 8.4:+33334025 | MS.gene97961:CDS |
| GAACTCTTCTCACTATTCCA+AGG | 0.613505 | 8.4:+33330352 | MS.gene97961:CDS |
| AAGACTATGGATACTGCATG+AGG | 0.618783 | 8.4:+33334878 | MS.gene97961:CDS |
| TCACACAAAGGAAGTGGTAA+CGG | 0.620128 | 8.4:-33334404 | None:intergenic |
| TGCTTCGTGTTAATAAAACA+AGG | 0.630774 | 8.4:+33331679 | MS.gene97961:CDS |
| TCAAGAAAATGCAATCCAGA+AGG | 0.642722 | 8.4:+33331651 | MS.gene97961:CDS |
| AGAAAATGCAATCCAGAAGG+TGG | 0.643834 | 8.4:+33331654 | MS.gene97961:CDS |
| TAATAAATTCTATAGGACAA+AGG | 0.644773 | 8.4:+33330235 | MS.gene97961:CDS |
| GACCGGTATATAATGTTGAA+GGG | 0.648187 | 8.4:-33334378 | None:intergenic |
| GTGGGCAAGGAAAGAATGTG+AGG | 0.650577 | 8.4:+33331547 | MS.gene97961:CDS |
| GCAGAAAAGATGATCAAAGG+TGG | 0.655712 | 8.4:+33331711 | MS.gene97961:CDS |
| TTATGTTCCTTATCACACAA+AGG | 0.659762 | 8.4:-33334416 | None:intergenic |
| GAAGTTCATGGATGAAGTGG+AGG | 0.667764 | 8.4:+33332840 | MS.gene97961:CDS |
| GATTCTGAAGAAATTTGACA+AGG | 0.671965 | 8.4:+33332083 | MS.gene97961:CDS |
| AGACTATGGATACTGCATGA+GGG | 0.676026 | 8.4:+33334879 | MS.gene97961:CDS |
| CTCTTCTCACTATTCCAAGG+AGG | 0.702664 | 8.4:+33330355 | MS.gene97961:CDS |
| ATATTTCAACAACTCAGACA+AGG | 0.704761 | 8.4:+33332258 | MS.gene97961:CDS |
| TAGGAACAGAGAACAAACAG+AGG | 0.753012 | 8.4:+33331416 | MS.gene97961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAAATAAATATTTTAT+TGG | + | chr8.4:33335994-33336013 | MS.gene97961:intron | 0.0% |
| !! | AAGAATAAAAAATTACATAA+AGG | - | chr8.4:33333197-33333216 | None:intergenic | 10.0% |
| !! | AAGTTGTATTTATTTAAATA+GGG | + | chr8.4:33330695-33330714 | MS.gene97961:intron | 10.0% |
| !! | AGAATAAAAAATTACATAAA+GGG | - | chr8.4:33333196-33333215 | None:intergenic | 10.0% |
| !! | ATTTGAAAATTATCATAAAA+AGG | + | chr8.4:33330820-33330839 | MS.gene97961:intron | 10.0% |
| !! | TAAGTTGTATTTATTTAAAT+AGG | + | chr8.4:33330694-33330713 | MS.gene97961:intron | 10.0% |
| !! | TGAATTTGTAAAATAAAATA+TGG | - | chr8.4:33333509-33333528 | None:intergenic | 10.0% |
| !!! | AAAAATGTTGATTTTTTTAT+TGG | + | chr8.4:33333651-33333670 | MS.gene97961:intron | 10.0% |
| !!! | AATACTTTTACAAAATTTAT+AGG | + | chr8.4:33332547-33332566 | MS.gene97961:intron | 10.0% |
| !!! | ATATTTTATTAAACTATTAC+AGG | - | chr8.4:33331001-33331020 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTTTCTTTTC+AGG | + | chr8.4:33330085-33330104 | MS.gene97961:intron | 10.0% |
| !!! | CATTTTTTTAATATAAATTG+TGG | - | chr8.4:33332127-33332146 | None:intergenic | 10.0% |
| !! | AAAAAAAAGTTTACTTGAAT+TGG | - | chr8.4:33329977-33329996 | None:intergenic | 15.0% |
| !! | AATGTTTAGTGAATATAAAA+AGG | + | chr8.4:33331918-33331937 | MS.gene97961:intron | 15.0% |
| !! | ATAAGGTTAATAAATTCTAT+AGG | + | chr8.4:33330228-33330247 | MS.gene97961:CDS | 15.0% |
| !! | ATTACCAAAAAAAAAAAGAT+AGG | + | chr8.4:33330616-33330635 | MS.gene97961:intron | 15.0% |
| !! | CATTTAAAGATATATATGAT+TGG | - | chr8.4:33332612-33332631 | None:intergenic | 15.0% |
| !!! | CTTCTTTTTTTAATAACAAA+AGG | + | chr8.4:33333214-33333233 | MS.gene97961:intron | 15.0% |
| !!! | TTCAAAATTATGTATTGTTT+TGG | + | chr8.4:33334515-33334534 | MS.gene97961:intron | 15.0% |
| !!! | TTCCTTATTTATAATCTTAA+AGG | - | chr8.4:33335730-33335749 | None:intergenic | 15.0% |
| !!! | TTCCTTTAAGATTATAAATA+AGG | + | chr8.4:33335725-33335744 | MS.gene97961:intron | 15.0% |
| !! | AAAAAAAGATAGGTACATAT+AGG | + | chr8.4:33330626-33330645 | MS.gene97961:intron | 20.0% |
| !! | AATATGTACATAAAAACTTC+TGG | + | chr8.4:33333559-33333578 | MS.gene97961:intron | 20.0% |
| !! | ACATGATTAATTATGTTCAA+TGG | - | chr8.4:33331964-33331983 | None:intergenic | 20.0% |
| !! | AGAATTTATTAACCTTATTG+AGG | - | chr8.4:33330226-33330245 | None:intergenic | 20.0% |
| !! | AGACATGATTATATGATTAT+TGG | - | chr8.4:33332451-33332470 | None:intergenic | 20.0% |
| !! | AGACTATACAAAATGAATAT+GGG | + | chr8.4:33330769-33330788 | MS.gene97961:intron | 20.0% |
| !! | CAAATATATTCTTTCATCAA+AGG | - | chr8.4:33332342-33332361 | None:intergenic | 20.0% |
| !! | CTTTGATGAAAGAATATATT+TGG | + | chr8.4:33332340-33332359 | MS.gene97961:intron | 20.0% |
| !! | TAAATAGTCCTGAATTTATT+TGG | - | chr8.4:33333727-33333746 | None:intergenic | 20.0% |
| !! | TAATAAATTCTATAGGACAA+AGG | + | chr8.4:33330235-33330254 | MS.gene97961:CDS | 20.0% |
| !! | TAGACTATACAAAATGAATA+TGG | + | chr8.4:33330768-33330787 | MS.gene97961:intron | 20.0% |
| !! | TAGGATATTTGAATGATTAT+AGG | + | chr8.4:33331757-33331776 | MS.gene97961:CDS | 20.0% |
| !! | TAGTTACATGATTTCTTTAT+AGG | + | chr8.4:33334792-33334811 | MS.gene97961:intron | 20.0% |
| !! | TATAATCATTCAAATATCCT+AGG | - | chr8.4:33331758-33331777 | None:intergenic | 20.0% |
| !! | TATTTAAATAGGGTCTAAAA+TGG | + | chr8.4:33330705-33330724 | MS.gene97961:intron | 20.0% |
| !! | TGAAAACATATAATACTATC+TGG | - | chr8.4:33331333-33331352 | None:intergenic | 20.0% |
| !! | TTACTTCTTTAATCTAGATT+AGG | - | chr8.4:33335689-33335708 | None:intergenic | 20.0% |
| !! | TTGAAAATATGCTTAAAGAA+AGG | - | chr8.4:33334981-33335000 | None:intergenic | 20.0% |
| !!! | AAATACTTTTAATGATCGAA+CGG | - | chr8.4:33334663-33334682 | None:intergenic | 20.0% |
| !!! | AATATCCATTTGTTTTTTCA+AGG | - | chr8.4:33330288-33330307 | None:intergenic | 20.0% |
| !!! | AATATTATTTTTGCTTATGC+AGG | + | chr8.4:33335748-33335767 | MS.gene97961:intron | 20.0% |
| !!! | AATATTTTATTGGTTCAGAT+TGG | + | chr8.4:33336004-33336023 | MS.gene97961:intron | 20.0% |
| !!! | ATAAATCAATGGATTTGAAA+TGG | + | chr8.4:33331484-33331503 | MS.gene97961:CDS | 20.0% |
| !!! | ATGATTATTTGGTTTTTTGT+TGG | - | chr8.4:33329879-33329898 | None:intergenic | 20.0% |
| !!! | CATCTTATATTAAAGTTGAT+TGG | - | chr8.4:33335596-33335615 | None:intergenic | 20.0% |
| !!! | CTTCATGATATTGATTTTTT+AGG | + | chr8.4:33332034-33332053 | MS.gene97961:intron | 20.0% |
| !!! | GATTCTTTTTTATGATGAAT+TGG | - | chr8.4:33332925-33332944 | None:intergenic | 20.0% |
| !!! | TAAATCAATGGATTTGAAAT+GGG | + | chr8.4:33331485-33331504 | MS.gene97961:CDS | 20.0% |
| !!! | TAGTGTGTTTTTTTTTTTCA+TGG | + | chr8.4:33334616-33334635 | MS.gene97961:intron | 20.0% |
| !!! | TGTACCTATCTTTTTTTTTT+TGG | - | chr8.4:33330623-33330642 | None:intergenic | 20.0% |
| !!! | TTTCTTGGTTAAATTTTACA+AGG | - | chr8.4:33330888-33330907 | None:intergenic | 20.0% |
| !!! | TTTTAATAACAAAAGGCAAT+TGG | + | chr8.4:33333221-33333240 | MS.gene97961:intron | 20.0% |
| ! | AAAAAATGTACCTTGTAAAG+AGG | - | chr8.4:33334450-33334469 | None:intergenic | 25.0% |
| ! | AAATGAAGAGGATAAATCAA+TGG | + | chr8.4:33331473-33331492 | MS.gene97961:CDS | 25.0% |
| ! | AAATTCTCTAAGCAATTTGA+GGG | + | chr8.4:33329767-33329786 | MS.gene97961:CDS | 25.0% |
| ! | AACTTTCTTAGTGATGAAAA+AGG | - | chr8.4:33329926-33329945 | None:intergenic | 25.0% |
| ! | AACTTTGTACCAATTGTATT+GGG | + | chr8.4:33335211-33335230 | MS.gene97961:CDS | 25.0% |
| ! | AAGAGAAAAAAAGTAACCAT+AGG | - | chr8.4:33333287-33333306 | None:intergenic | 25.0% |
| ! | ACATACAAGTAATAGTAAGA+AGG | - | chr8.4:33334358-33334377 | None:intergenic | 25.0% |
| ! | AGAAATTAGTTACCTTGTAA+TGG | + | chr8.4:33331608-33331627 | MS.gene97961:CDS | 25.0% |
| ! | AGGTATTAAACATTACTCTA+AGG | + | chr8.4:33335768-33335787 | MS.gene97961:intron | 25.0% |
| ! | AGTTAATTACCAGAAAAAGT+AGG | - | chr8.4:33334230-33334249 | None:intergenic | 25.0% |
| ! | ATAAATTCAGGACTATTTAC+TGG | + | chr8.4:33333728-33333747 | MS.gene97961:intron | 25.0% |
| ! | ATCAATTCATTTCTTAACCA+AGG | - | chr8.4:33335281-33335300 | None:intergenic | 25.0% |
| ! | ATCTATTTACTACTTGTCTA+TGG | + | chr8.4:33335313-33335332 | MS.gene97961:CDS | 25.0% |
| ! | ATTACCATTAATAGAGAATG+TGG | - | chr8.4:33330396-33330415 | None:intergenic | 25.0% |
| ! | CCATAGGAGATATATATTAA+TGG | - | chr8.4:33333271-33333290 | None:intergenic | 25.0% |
| ! | CCATTAATATATATCTCCTA+TGG | + | chr8.4:33333268-33333287 | MS.gene97961:intron | 25.0% |
| ! | CTCTTATTCATTGATCTTTA+AGG | - | chr8.4:33332744-33332763 | None:intergenic | 25.0% |
| ! | GACAAACAAGTAAATAAAGT+TGG | - | chr8.4:33332802-33332821 | None:intergenic | 25.0% |
| ! | GTCATAAAACTTCATATTGA+AGG | - | chr8.4:33331195-33331214 | None:intergenic | 25.0% |
| ! | TATACATGATGGTTTATGAT+TGG | + | chr8.4:33334712-33334731 | MS.gene97961:intron | 25.0% |
| ! | TCACAAAACAAACAAACTAA+AGG | - | chr8.4:33333047-33333066 | None:intergenic | 25.0% |
| ! | TGAATCTTCCAAATAAATTC+AGG | + | chr8.4:33333716-33333735 | MS.gene97961:intron | 25.0% |
| ! | TTACAAGTGTTTAGAAAAGT+GGG | - | chr8.4:33333149-33333168 | None:intergenic | 25.0% |
| ! | TTCAAAAGTCATATACATGA+TGG | + | chr8.4:33334701-33334720 | MS.gene97961:intron | 25.0% |
| ! | TTGATTGGATACGATAATTA+GGG | - | chr8.4:33335581-33335600 | None:intergenic | 25.0% |
| ! | TTGTTTGTCCTAAAAATTAC+AGG | + | chr8.4:33332813-33332832 | MS.gene97961:intron | 25.0% |
| ! | TTTACAAGTGTTTAGAAAAG+TGG | - | chr8.4:33333150-33333169 | None:intergenic | 25.0% |
| ! | TTTATCCTCTTCATTTGATT+CGG | - | chr8.4:33331469-33331488 | None:intergenic | 25.0% |
| !! | AAGGTAACTAATTTCTGAAA+AGG | - | chr8.4:33331604-33331623 | None:intergenic | 25.0% |
| !! | AATCTTTAGAGAGAACAAAA+GGG | - | chr8.4:33335354-33335373 | None:intergenic | 25.0% |
| !! | ATCTTATTTATTGCATGTAC+AGG | + | chr8.4:33334332-33334351 | MS.gene97961:intron | 25.0% |
| !! | CAACATTTTCAAAACTTGAA+TGG | - | chr8.4:33335817-33335836 | None:intergenic | 25.0% |
| !! | GAACTCATTTGATGATTATT+TGG | - | chr8.4:33329890-33329909 | None:intergenic | 25.0% |
| !! | GGTTAAATTTTACAAGGAAA+GGG | - | chr8.4:33330882-33330901 | None:intergenic | 25.0% |
| !! | GTAAATATTTTCTACACCAT+CGG | - | chr8.4:33332685-33332704 | None:intergenic | 25.0% |
| !! | TAATCTTTAGAGAGAACAAA+AGG | - | chr8.4:33335355-33335374 | None:intergenic | 25.0% |
| !! | TATAGAAATAGCTTGTAGAT+AGG | + | chr8.4:33330583-33330602 | MS.gene97961:intron | 25.0% |
| !! | TATGAAAAAGATAGAAGTGT+TGG | + | chr8.4:33335152-33335171 | MS.gene97961:CDS | 25.0% |
| !! | TATTAACCTTATTGAGGTTT+TGG | - | chr8.4:33330220-33330239 | None:intergenic | 25.0% |
| !! | TGGTTAAATTTTACAAGGAA+AGG | - | chr8.4:33330883-33330902 | None:intergenic | 25.0% |
| !! | TTTGTCAAGAATTTTGCTAA+AGG | + | chr8.4:33332868-33332887 | MS.gene97961:CDS | 25.0% |
| !!! | AAGAAGCTTTTGTTGATTAT+TGG | + | chr8.4:33329810-33329829 | MS.gene97961:CDS | 25.0% |
| !!! | AGACAATGTTCTAAAGTTAT+AGG | - | chr8.4:33330659-33330678 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTTGTACATACA+AGG | - | chr8.4:33333119-33333138 | None:intergenic | 25.0% |
| !!! | ATTTTATGAGTAGTTTGCTA+TGG | - | chr8.4:33333692-33333711 | None:intergenic | 25.0% |
| !!! | CATATAAGTGTTTTTAGAAC+CGG | + | chr8.4:33333895-33333914 | MS.gene97961:intron | 25.0% |
| !!! | TAAAAACTTCTGGAACTTAA+TGG | + | chr8.4:33333569-33333588 | MS.gene97961:intron | 25.0% |
| !!! | TACTTGTCTTATTCTTTTCT+TGG | - | chr8.4:33330903-33330922 | None:intergenic | 25.0% |
| !!! | TGTTGATTTTGTACATTTGA+TGG | + | chr8.4:33334250-33334269 | MS.gene97961:intron | 25.0% |
| !!! | TTTTATGATGAATTGGTCTA+AGG | - | chr8.4:33332918-33332937 | None:intergenic | 25.0% |
| !!! | TTTTGGTGCATATGTTTTAA+TGG | + | chr8.4:33333766-33333785 | MS.gene97961:CDS | 25.0% |
| !!! | TTTTTTCTTTTCAGGTTCAT+AGG | + | chr8.4:33330093-33330112 | MS.gene97961:intron | 25.0% |
| AAGTTATTAGAAGAGGACTA+TGG | + | chr8.4:33335873-33335892 | MS.gene97961:CDS | 30.0% | |
| AATCCAAAGAAAACACAAGA+TGG | + | chr8.4:33333074-33333093 | MS.gene97961:intron | 30.0% | |
| AATTGTATTGGGACTTTGTA+AGG | + | chr8.4:33335222-33335241 | MS.gene97961:CDS | 30.0% | |
| ACAAATCACCTTATCAATCT+AGG | + | chr8.4:33335086-33335105 | MS.gene97961:CDS | 30.0% | |
| AGAAAGAGTTTCTTGATAGA+GGG | + | chr8.4:33330258-33330277 | MS.gene97961:CDS | 30.0% | |
| AGATAAAATGTCACAAAGTG+TGG | + | chr8.4:33335620-33335639 | MS.gene97961:intron | 30.0% | |
| ATATTTCAACAACTCAGACA+AGG | + | chr8.4:33332258-33332277 | MS.gene97961:CDS | 30.0% | |
| ATGGCATGTTACTATATAAC+TGG | + | chr8.4:33334841-33334860 | MS.gene97961:CDS | 30.0% | |
| ATTGTATTGGGACTTTGTAA+GGG | + | chr8.4:33335223-33335242 | MS.gene97961:CDS | 30.0% | |
| ATTTCTTAACCAAGGATTCT+TGG | - | chr8.4:33335273-33335292 | None:intergenic | 30.0% | |
| ATTTGACTCTACTCACAAAA+GGG | + | chr8.4:33334172-33334191 | MS.gene97961:CDS | 30.0% | |
| CAACTTTGTACCAATTGTAT+TGG | + | chr8.4:33335210-33335229 | MS.gene97961:CDS | 30.0% | |
| CATATTTGCCTAGATTGATA+AGG | - | chr8.4:33335097-33335116 | None:intergenic | 30.0% | |
| CATGAGTTCTTATTAGAAGT+CGG | - | chr8.4:33333625-33333644 | None:intergenic | 30.0% | |
| CATGCAATTACTTTCTTCAT+TGG | + | chr8.4:33332946-33332965 | MS.gene97961:CDS | 30.0% | |
| CTTGTTTCATCAATTAGCAA+AGG | + | chr8.4:33330119-33330138 | MS.gene97961:CDS | 30.0% | |
| GAAATTCTCTAAGCAATTTG+AGG | + | chr8.4:33329766-33329785 | MS.gene97961:CDS | 30.0% | |
| GAATCTAATACTCTGTATAC+TGG | + | chr8.4:33331374-33331393 | MS.gene97961:intron | 30.0% | |
| GAATCTTTATAAATGCAAGC+AGG | - | chr8.4:33332068-33332087 | None:intergenic | 30.0% | |
| GAATTGCAAATGAAAACTAG+TGG | - | chr8.4:33332402-33332421 | None:intergenic | 30.0% | |
| GTGTGATAAGGAACATAATT+TGG | + | chr8.4:33334421-33334440 | MS.gene97961:CDS | 30.0% | |
| GTTGATTGGATACGATAATT+AGG | - | chr8.4:33335582-33335601 | None:intergenic | 30.0% | |
| TAAAAGTCACACGTTTCTAA+TGG | + | chr8.4:33333418-33333437 | MS.gene97961:intron | 30.0% | |
| TAAATGTGTTAGTGTTGTGT+CGG | + | chr8.4:33331038-33331057 | MS.gene97961:intron | 30.0% | |
| TAATCATCAAATGAGTTCAG+TGG | + | chr8.4:33329892-33329911 | MS.gene97961:intron | 30.0% | |
| TATAATCATGTCTTCACCAA+AGG | + | chr8.4:33332458-33332477 | MS.gene97961:intron | 30.0% | |
| TCATCCACATTCTCTATTAA+TGG | + | chr8.4:33330389-33330408 | MS.gene97961:CDS | 30.0% | |
| TCATGGATAAGAAAGGTAAA+GGG | + | chr8.4:33330330-33330349 | MS.gene97961:CDS | 30.0% | |
| TGAACAAATCTTCCATTACA+AGG | - | chr8.4:33331623-33331642 | None:intergenic | 30.0% | |
| TGCTTCGTGTTAATAAAACA+AGG | + | chr8.4:33331679-33331698 | MS.gene97961:CDS | 30.0% | |
| TGGCATGTTACTATATAACT+GGG | + | chr8.4:33334842-33334861 | MS.gene97961:CDS | 30.0% | |
| TTACAAAGTCCCAATACAAT+TGG | - | chr8.4:33335223-33335242 | None:intergenic | 30.0% | |
| TTATGTTCCTTATCACACAA+AGG | - | chr8.4:33334419-33334438 | None:intergenic | 30.0% | |
| TTCATGGATAAGAAAGGTAA+AGG | + | chr8.4:33330329-33330348 | MS.gene97961:CDS | 30.0% | |
| TTTAGACCAAAACCTCAATA+AGG | + | chr8.4:33330211-33330230 | MS.gene97961:CDS | 30.0% | |
| TTTCTACATTTCTTCCTCTA+TGG | + | chr8.4:33334006-33334025 | MS.gene97961:CDS | 30.0% | |
| TTTGTCCTAAAAATTACAGG+TGG | + | chr8.4:33332816-33332835 | MS.gene97961:intron | 30.0% | |
| ! | AATGATTTTAGACCATCCTT+TGG | - | chr8.4:33332477-33332496 | None:intergenic | 30.0% |
| ! | ACTATTTACTGGATGCTTTT+GGG | + | chr8.4:33333739-33333758 | MS.gene97961:CDS | 30.0% |
| ! | AGTTTACTTGAATTGGTTCA+TGG | - | chr8.4:33329970-33329989 | None:intergenic | 30.0% |
| ! | ATTTCTGAAAAGGTTTGAGA+AGG | - | chr8.4:33331594-33331613 | None:intergenic | 30.0% |
| ! | GATTCTGAAGAAATTTGACA+AGG | + | chr8.4:33332083-33332102 | MS.gene97961:CDS | 30.0% |
| ! | GGTTTCATTGAGCTTTATAA+GGG | + | chr8.4:33331732-33331751 | MS.gene97961:CDS | 30.0% |
| ! | GTAAATCATGTTTGAGATGT+TGG | + | chr8.4:33332376-33332395 | MS.gene97961:intron | 30.0% |
| ! | GTTAATGCTGTTTGAATATG+TGG | + | chr8.4:33331879-33331898 | MS.gene97961:intron | 30.0% |
| ! | TGGTTTCATTGAGCTTTATA+AGG | + | chr8.4:33331731-33331750 | MS.gene97961:CDS | 30.0% |
| ! | TTTCCATGTAGAGTGAATTT+TGG | - | chr8.4:33333820-33333839 | None:intergenic | 30.0% |
| ! | TTTTACCGAATCAAATGAAG+AGG | + | chr8.4:33331461-33331480 | MS.gene97961:CDS | 30.0% |
| !! | AAAAAGATAGAAGTGTTGGA+TGG | + | chr8.4:33335156-33335175 | MS.gene97961:CDS | 30.0% |
| !! | TCAACTACTTTGAGATAGAT+TGG | - | chr8.4:33332232-33332251 | None:intergenic | 30.0% |
| !!! | ATTTTGATTTCTAGTGTGCA+AGG | + | chr8.4:33335042-33335061 | MS.gene97961:intron | 30.0% |
| AAGGAATTGAACTTGTGCAT+AGG | - | chr8.4:33334202-33334221 | None:intergenic | 35.0% | |
| AAGGGTTATGCAAATATGCA+TGG | - | chr8.4:33333178-33333197 | None:intergenic | 35.0% | |
| AATGGGAAGATGGTAAATTG+AGG | + | chr8.4:33331502-33331521 | MS.gene97961:CDS | 35.0% | |
| AATTTGGTCACCTCTTTACA+AGG | + | chr8.4:33334437-33334456 | MS.gene97961:CDS | 35.0% | |
| ACAAAAGCTTCTTTCCATTC+TGG | - | chr8.4:33329803-33329822 | None:intergenic | 35.0% | |
| ACACCAAAATTCACTCTACA+TGG | + | chr8.4:33333814-33333833 | MS.gene97961:CDS | 35.0% | |
| ACACGTTTCTAATGGTTTGA+TGG | + | chr8.4:33333426-33333445 | MS.gene97961:intron | 35.0% | |
| ACATCTTCAATCAGAAGAGT+CGG | - | chr8.4:33335398-33335417 | None:intergenic | 35.0% | |
| AGCTATAAGACTCAAGACTA+TGG | + | chr8.4:33334865-33334884 | MS.gene97961:CDS | 35.0% | |
| AGTAACATGCCATAAACTCT+AGG | - | chr8.4:33334834-33334853 | None:intergenic | 35.0% | |
| ATATTATTGGAGAGCAATGC+AGG | + | chr8.4:33334945-33334964 | MS.gene97961:CDS | 35.0% | |
| CATGAGCATCTAAATAATGC+TGG | + | chr8.4:33336029-33336048 | MS.gene97961:CDS | 35.0% | |
| CATGCAGAAAAGATGATCAA+AGG | + | chr8.4:33331708-33331727 | MS.gene97961:CDS | 35.0% | |
| CATTTGACTCTACTCACAAA+AGG | + | chr8.4:33334171-33334190 | MS.gene97961:CDS | 35.0% | |
| CTTATGATTTCTTCTCCTTC+AGG | + | chr8.4:33332186-33332205 | MS.gene97961:intron | 35.0% | |
| CTTTATAGGTTCCAATGCTA+AGG | + | chr8.4:33334806-33334825 | MS.gene97961:intron | 35.0% | |
| GAAAGAGTTTCTTGATAGAG+GGG | + | chr8.4:33330259-33330278 | MS.gene97961:CDS | 35.0% | |
| GACCGGTATATAATGTTGAA+GGG | - | chr8.4:33334381-33334400 | None:intergenic | 35.0% | |
| GAGAAAGAGTTTCTTGATAG+AGG | + | chr8.4:33330257-33330276 | MS.gene97961:CDS | 35.0% | |
| GCACTTGAAGTTATTAGAAG+AGG | + | chr8.4:33335866-33335885 | MS.gene97961:CDS | 35.0% | |
| GCCATGAAACTTCTTATTGA+AGG | - | chr8.4:33331093-33331112 | None:intergenic | 35.0% | |
| GCCTTCAATAAGAAGTTTCA+TGG | + | chr8.4:33331089-33331108 | MS.gene97961:intron | 35.0% | |
| GGAGTCCTTGAAAAAACAAA+TGG | + | chr8.4:33330280-33330299 | MS.gene97961:CDS | 35.0% | |
| GGTAAATTGAGGACATTATC+CGG | + | chr8.4:33331513-33331532 | MS.gene97961:CDS | 35.0% | |
| GTCCCTTCAACATTATATAC+CGG | + | chr8.4:33334376-33334395 | MS.gene97961:CDS | 35.0% | |
| GTGTTACCAACAATATCAAG+TGG | + | chr8.4:33332425-33332444 | MS.gene97961:intron | 35.0% | |
| TATTGGCCACTTGATATTGT+TGG | - | chr8.4:33332434-33332453 | None:intergenic | 35.0% | |
| TCAAGAAAATGCAATCCAGA+AGG | + | chr8.4:33331651-33331670 | MS.gene97961:CDS | 35.0% | |
| TCTCCAATAATATGGCAGAA+AGG | - | chr8.4:33334938-33334957 | None:intergenic | 35.0% | |
| TCTGCATTCATGGATAAGAA+AGG | + | chr8.4:33330323-33330342 | MS.gene97961:CDS | 35.0% | |
| TGACCGGTATATAATGTTGA+AGG | - | chr8.4:33334382-33334401 | None:intergenic | 35.0% | |
| TGCATTGCTCTCCAATAATA+TGG | - | chr8.4:33334946-33334965 | None:intergenic | 35.0% | |
| TGCTAAAGGTGATCATAGAA+AGG | + | chr8.4:33332882-33332901 | MS.gene97961:CDS | 35.0% | |
| TGTCCTTTCTGCCATATTAT+TGG | + | chr8.4:33334932-33334951 | MS.gene97961:CDS | 35.0% | |
| TGTTCGATACATGTTGGTAT+TGG | + | chr8.4:33335424-33335443 | MS.gene97961:intron | 35.0% | |
| TTGAACGTAACAACATGTGT+TGG | + | chr8.4:33331248-33331267 | MS.gene97961:intron | 35.0% | |
| TTTCGAGATAGTTCCAACTA+AGG | + | chr8.4:33334077-33334096 | MS.gene97961:CDS | 35.0% | |
| ! | AAATAGGGTCTAAAATGGTG+TGG | + | chr8.4:33330710-33330729 | MS.gene97961:intron | 35.0% |
| ! | ATGGATTTGAAATGGGAAGA+TGG | + | chr8.4:33331492-33331511 | MS.gene97961:CDS | 35.0% |
| ! | ATGTGTCATTGTCAATCTTG+TGG | - | chr8.4:33330973-33330992 | None:intergenic | 35.0% |
| ! | ATTGAATTCTGTTTCTCCCT+AGG | + | chr8.4:33334548-33334567 | MS.gene97961:intron | 35.0% |
| ! | CTGTACTTTAGTTCCTTAGT+TGG | - | chr8.4:33334093-33334112 | None:intergenic | 35.0% |
| ! | CTTCACCACCTGTAATTTTT+AGG | - | chr8.4:33332824-33332843 | None:intergenic | 35.0% |
| ! | CTTTTACTTACCTAAGCACA+GGG | - | chr8.4:33333850-33333869 | None:intergenic | 35.0% |
| ! | GACTATTTACTGGATGCTTT+TGG | + | chr8.4:33333738-33333757 | MS.gene97961:CDS | 35.0% |
| ! | TCTTTTACTTACCTAAGCAC+AGG | - | chr8.4:33333851-33333870 | None:intergenic | 35.0% |
| !! | GTTTTAATGGCTCATCTTAC+TGG | + | chr8.4:33333779-33333798 | MS.gene97961:CDS | 35.0% |
| !!! | TCTGATGCTGGACTTTTTTA+TGG | + | chr8.4:33334572-33334591 | MS.gene97961:CDS | 35.0% |
| AAAGGAACTCCAAGAATCCT+TGG | + | chr8.4:33335261-33335280 | MS.gene97961:CDS | 40.0% | |
| AAGACTATGGATACTGCATG+AGG | + | chr8.4:33334878-33334897 | MS.gene97961:CDS | 40.0% | |
| AAGGAGATGGTTTGATGAAG+GGG | + | chr8.4:33335061-33335080 | MS.gene97961:CDS | 40.0% | |
| ACCACTTCCTTTGTGTGATA+AGG | + | chr8.4:33334409-33334428 | MS.gene97961:CDS | 40.0% | |
| ACGTCAATGTCTCGTAGATA+AGG | + | chr8.4:33335549-33335568 | MS.gene97961:intron | 40.0% | |
| AGAAAATGCAATCCAGAAGG+TGG | + | chr8.4:33331654-33331673 | MS.gene97961:CDS | 40.0% | |
| AGACTATGGATACTGCATGA+GGG | + | chr8.4:33334879-33334898 | MS.gene97961:CDS | 40.0% | |
| ATACAAGGAGCTAGTGACTA+AGG | - | chr8.4:33333104-33333123 | None:intergenic | 40.0% | |
| ATCATGTCTTCACCAAAGGA+TGG | + | chr8.4:33332462-33332481 | MS.gene97961:intron | 40.0% | |
| ATGGCTGCAACATTATTGCA+TGG | + | chr8.4:33334025-33334044 | MS.gene97961:CDS | 40.0% | |
| ATTACAGGTGGTGAAGTTCA+TGG | + | chr8.4:33332828-33332847 | MS.gene97961:intron | 40.0% | |
| ATTGGGACTTTGTAAGGGAT+TGG | + | chr8.4:33335228-33335247 | MS.gene97961:CDS | 40.0% | |
| CAAGGAGATGGTTTGATGAA+GGG | + | chr8.4:33335060-33335079 | MS.gene97961:CDS | 40.0% | |
| CAATAATGTTGCAGCCATAG+AGG | - | chr8.4:33334023-33334042 | None:intergenic | 40.0% | |
| CAGAGAACAAACAGAGGATT+TGG | + | chr8.4:33331422-33331441 | MS.gene97961:CDS | 40.0% | |
| CTGGCAACACTTCATAATGA+AGG | - | chr8.4:33331314-33331333 | None:intergenic | 40.0% | |
| CTTCTGATTGAAGATGTGTC+TGG | + | chr8.4:33335401-33335420 | MS.gene97961:intron | 40.0% | |
| GAACTCTTCTCACTATTCCA+AGG | + | chr8.4:33330352-33330371 | MS.gene97961:CDS | 40.0% | |
| GAGGACTATGGAATTTCTAC+AGG | + | chr8.4:33335885-33335904 | MS.gene97961:CDS | 40.0% | |
| GCACAAGTTCAATTCCTTCT+TGG | + | chr8.4:33334204-33334223 | MS.gene97961:CDS | 40.0% | |
| GCAGAAAAGATGATCAAAGG+TGG | + | chr8.4:33331711-33331730 | MS.gene97961:CDS | 40.0% | |
| GTCATTGTCAATCTTGTGGT+TGG | - | chr8.4:33330969-33330988 | None:intergenic | 40.0% | |
| TACAAGGAGCTAGTGACTAA+GGG | - | chr8.4:33333103-33333122 | None:intergenic | 40.0% | |
| TACAATGTCTATGACTGCTG+TGG | + | chr8.4:33334131-33334150 | MS.gene97961:CDS | 40.0% | |
| TAGCATCAGTGTCAGCAAAT+TGG | - | chr8.4:33330172-33330191 | None:intergenic | 40.0% | |
| TAGGAACAGAGAACAAACAG+AGG | + | chr8.4:33331416-33331435 | MS.gene97961:CDS | 40.0% | |
| TCACACAAAGGAAGTGGTAA+CGG | - | chr8.4:33334407-33334426 | None:intergenic | 40.0% | |
| TCATCCTCCACTTCATGAAA+AGG | - | chr8.4:33336086-33336105 | None:intergenic | 40.0% | |
| TCCACTTCATGAAAAGGAAG+TGG | - | chr8.4:33336080-33336099 | None:intergenic | 40.0% | |
| TCCTTATCACACAAAGGAAG+TGG | - | chr8.4:33334413-33334432 | None:intergenic | 40.0% | |
| TGAGCTCAAATCTGCATTCA+TGG | + | chr8.4:33330313-33330332 | MS.gene97961:CDS | 40.0% | |
| TTATCTACGAGACATTGACG+TGG | - | chr8.4:33335550-33335569 | None:intergenic | 40.0% | |
| TTCCTTGCCCACTAAGAAAA+TGG | - | chr8.4:33331539-33331558 | None:intergenic | 40.0% | |
| TTGGGACTTTGTAAGGGATT+GGG | + | chr8.4:33335229-33335248 | MS.gene97961:CDS | 40.0% | |
| ! | ACTTCCTTTTCATGAAGTGG+AGG | + | chr8.4:33336079-33336098 | MS.gene97961:CDS | 40.0% |
| ! | ATTGAGCTTTATAAGGGCCT+AGG | + | chr8.4:33331738-33331757 | MS.gene97961:CDS | 40.0% |
| ! | CTTCATATTGAAGGCGTGTT+CGG | - | chr8.4:33331186-33331205 | None:intergenic | 40.0% |
| ! | GGTCCATCTTGTGTTTTCTT+TGG | - | chr8.4:33333080-33333099 | None:intergenic | 40.0% |
| !! | ACATTACTCTAAGGCTTGCT+TGG | + | chr8.4:33335777-33335796 | MS.gene97961:CDS | 40.0% |
| !! | ATTTCTAGTGTGCAAGGAGA+TGG | + | chr8.4:33335048-33335067 | MS.gene97961:intron | 40.0% |
| !! | GTTTGAGAAGGTGTTGTCAA+AGG | - | chr8.4:33331582-33331601 | None:intergenic | 40.0% |
| !! | TATCCGGCCATTTTCTTAGT+GGG | + | chr8.4:33331529-33331548 | MS.gene97961:CDS | 40.0% |
| !! | TTATCCGGCCATTTTCTTAG+TGG | + | chr8.4:33331528-33331547 | MS.gene97961:CDS | 40.0% |
| !! | TTTGCTTTTCTGTGACCTGA+AGG | - | chr8.4:33332204-33332223 | None:intergenic | 40.0% |
| AAACTGTCTACCCTGTGCTT+AGG | + | chr8.4:33333837-33333856 | MS.gene97961:CDS | 45.0% | |
| AAAGTCCAGCATCAGAACCT+AGG | - | chr8.4:33334568-33334587 | None:intergenic | 45.0% | |
| AACTCTAGGCTCCTTAGCAT+TGG | - | chr8.4:33334820-33334839 | None:intergenic | 45.0% | |
| AAGTCCAGCATCAGAACCTA+GGG | - | chr8.4:33334567-33334586 | None:intergenic | 45.0% | |
| AAGTGATTGCCGACACATGT+TGG | + | chr8.4:33331157-33331176 | MS.gene97961:intron | 45.0% | |
| ACAAGGAGCTAGTGACTAAG+GGG | - | chr8.4:33333102-33333121 | None:intergenic | 45.0% | |
| ACACATGTTGGACACTGAAC+AGG | + | chr8.4:33331067-33331086 | MS.gene97961:intron | 45.0% | |
| ACTCTGTATACTGGATGCAG+AGG | + | chr8.4:33331383-33331402 | MS.gene97961:intron | 45.0% | |
| AGGGACAACTCATTCCAGAA+TGG | + | chr8.4:33329786-33329805 | MS.gene97961:CDS | 45.0% | |
| ATGCAGAGGAAGACTCTGTT+AGG | + | chr8.4:33331397-33331416 | MS.gene97961:intron | 45.0% | |
| ATGTCTATGACTGCTGTGGT+TGG | + | chr8.4:33334135-33334154 | MS.gene97961:CDS | 45.0% | |
| CCAGAAAAAGTAGGCCAAGA+AGG | - | chr8.4:33334221-33334240 | None:intergenic | 45.0% | |
| CTACACCATCGGTCAATCTT+AGG | - | chr8.4:33332674-33332693 | None:intergenic | 45.0% | |
| CTCTTCTCACTATTCCAAGG+AGG | + | chr8.4:33330355-33330374 | MS.gene97961:CDS | 45.0% | |
| GAAGTTCATGGATGAAGTGG+AGG | + | chr8.4:33332840-33332859 | MS.gene97961:CDS | 45.0% | |
| GCAAGGAGATGGTTTGATGA+AGG | + | chr8.4:33335059-33335078 | MS.gene97961:CDS | 45.0% | |
| GCTAAGGAGCCTAGAGTTTA+TGG | + | chr8.4:33334822-33334841 | MS.gene97961:CDS | 45.0% | |
| GGTGAAGTTCATGGATGAAG+TGG | + | chr8.4:33332837-33332856 | MS.gene97961:CDS | 45.0% | |
| GTCTGGTGTTCGATACATGT+TGG | + | chr8.4:33335418-33335437 | MS.gene97961:intron | 45.0% | |
| GTTTCAGCTATGTTAGCTGC+AGG | + | chr8.4:33335116-33335135 | MS.gene97961:CDS | 45.0% | |
| TGGGACTTTGTAAGGGATTG+GGG | + | chr8.4:33335230-33335249 | MS.gene97961:CDS | 45.0% | |
| TGTCAGACACTGACACATGT+TGG | + | chr8.4:33331276-33331295 | MS.gene97961:intron | 45.0% | |
| TTCTCACTATTCCAAGGAGG+AGG | + | chr8.4:33330358-33330377 | MS.gene97961:CDS | 45.0% | |
| TTGCCCACTAAGAAAATGGC+CGG | - | chr8.4:33331535-33331554 | None:intergenic | 45.0% | |
| ! | GCCACTTCCTTTTCATGAAG+TGG | + | chr8.4:33336076-33336095 | MS.gene97961:CDS | 45.0% |
| ! | GGATGCTTTTGGGCACTTTT+TGG | + | chr8.4:33333749-33333768 | MS.gene97961:CDS | 45.0% |
| ! | GGGTCTAAAATGGTGTGGTT+TGG | + | chr8.4:33330715-33330734 | MS.gene97961:intron | 45.0% |
| ! | TGGCAAGTTTAGAGCAGTGA+AGG | + | chr8.4:33336049-33336068 | MS.gene97961:CDS | 45.0% |
| ! | TGGTGTGGTTTGGAGAGAAA+TGG | + | chr8.4:33330725-33330744 | MS.gene97961:intron | 45.0% |
| !!! | CCTTCTTGGCCTACTTTTTC+TGG | + | chr8.4:33334218-33334237 | MS.gene97961:CDS | 45.0% |
| CAAGGAGCTAGTGACTAAGG+GGG | - | chr8.4:33333101-33333120 | None:intergenic | 50.0% | |
| GGCTGATCAACTTTGCAGTC+AGG | + | chr8.4:33334593-33334612 | MS.gene97961:CDS | 50.0% | |
| GTGCAAGTACAATCCGATCG+TGG | - | chr8.4:33333935-33333954 | None:intergenic | 50.0% | |
| GTGGGCAAGGAAAGAATGTG+AGG | + | chr8.4:33331547-33331566 | MS.gene97961:CDS | 50.0% | |
| TGACGCCTAAGATTGACCGA+TGG | + | chr8.4:33332666-33332685 | MS.gene97961:intron | 50.0% | |
| TGAGACAGATTCCTCCTCCT+TGG | - | chr8.4:33330372-33330391 | None:intergenic | 50.0% | |
| TGTCGGACATCGACACATGT+TGG | + | chr8.4:33331055-33331074 | MS.gene97961:intron | 50.0% | |
| TTGACGTGGATACAGACACC+AGG | - | chr8.4:33335536-33335555 | None:intergenic | 50.0% | |
| ! | GGGATTGGGGTTTGCTTCAA+AGG | + | chr8.4:33335243-33335262 | MS.gene97961:CDS | 50.0% |
| ! | TTCTCCCTAGGTTCTGATGC+TGG | + | chr8.4:33334560-33334579 | MS.gene97961:intron | 50.0% |
| !! | GGCCATTTTCTTAGTGGGCA+AGG | + | chr8.4:33331534-33331553 | MS.gene97961:CDS | 50.0% |
| !! | GTTCGGTGTCCAACATGTGT+CGG | - | chr8.4:33331169-33331188 | None:intergenic | 50.0% |
| !!! | GTTTTTAGAACCGGACCAGC+TGG | + | chr8.4:33333904-33333923 | MS.gene97961:intron | 50.0% |
| ACACGAAGCACACCACCTTC+TGG | - | chr8.4:33331669-33331688 | None:intergenic | 55.0% | |
| CAGGCACGACACAGACATGT+AGG | - | chr8.4:33335517-33335536 | None:intergenic | 55.0% | |
| CTACATGTCTGTGTCGTGCC+TGG | + | chr8.4:33335515-33335534 | MS.gene97961:intron | 55.0% | |
| ! | CCAGCTGGTTCAACCACGAT+CGG | + | chr8.4:33333919-33333938 | MS.gene97961:intron | 55.0% |
| !! | GGAAGTGGTAACGGCTTGAC+CGG | - | chr8.4:33334398-33334417 | None:intergenic | 55.0% |
| CCGATCGTGGTTGAACCAGC+TGG | - | chr8.4:33333922-33333941 | None:intergenic | 60.0% | |
| CGTGGTTGAACCAGCTGGTC+CGG | - | chr8.4:33333917-33333936 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 33329761 | 33336115 | 33329761 | ID=MS.gene97961 |
| chr8.4 | mRNA | 33329761 | 33336115 | 33329761 | ID=MS.gene97961.t1;Parent=MS.gene97961 |
| chr8.4 | exon | 33329761 | 33329862 | 33329761 | ID=MS.gene97961.t1.exon1;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33329761 | 33329862 | 33329761 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33330107 | 33330410 | 33330107 | ID=MS.gene97961.t1.exon2;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33330107 | 33330410 | 33330107 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33331403 | 33331778 | 33331403 | ID=MS.gene97961.t1.exon3;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33331403 | 33331778 | 33331403 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33332056 | 33332104 | 33332056 | ID=MS.gene97961.t1.exon4;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33332056 | 33332104 | 33332056 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33332208 | 33332279 | 33332208 | ID=MS.gene97961.t1.exon5;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33332208 | 33332279 | 33332208 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33332835 | 33332967 | 33332835 | ID=MS.gene97961.t1.exon6;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33332835 | 33332967 | 33332835 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33333738 | 33333858 | 33333738 | ID=MS.gene97961.t1.exon7;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33333738 | 33333858 | 33333738 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33333990 | 33334239 | 33333990 | ID=MS.gene97961.t1.exon8;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33333990 | 33334239 | 33333990 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33334354 | 33334458 | 33334354 | ID=MS.gene97961.t1.exon9;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33334354 | 33334458 | 33334354 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33334570 | 33334614 | 33334570 | ID=MS.gene97961.t1.exon10;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33334570 | 33334614 | 33334570 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33334814 | 33334966 | 33334814 | ID=MS.gene97961.t1.exon11;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33334814 | 33334966 | 33334814 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33335056 | 33335334 | 33335056 | ID=MS.gene97961.t1.exon12;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33335056 | 33335334 | 33335056 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33335770 | 33335906 | 33335770 | ID=MS.gene97961.t1.exon13;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33335770 | 33335906 | 33335770 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| chr8.4 | exon | 33336022 | 33336115 | 33336022 | ID=MS.gene97961.t1.exon14;Parent=MS.gene97961.t1 |
| chr8.4 | CDS | 33336022 | 33336115 | 33336022 | ID=cds.MS.gene97961.t1;Parent=MS.gene97961.t1 |
| Gene Sequence |
| Protein sequence |
