Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98058.t1 | XP_003614163.1 | 94.4 | 514 | 29 | 0 | 1 | 514 | 147 | 660 | 8.30E-281 | 975.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98058.t1 | P0C7R4 | 65.4 | 515 | 172 | 4 | 1 | 513 | 147 | 657 | 1.5e-193 | 677.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98058.t1 | G7JZ42 | 94.4 | 514 | 29 | 0 | 1 | 514 | 147 | 660 | 6.0e-281 | 975.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98058 | MS.gene064542 | PPI |
| MS.gene050870 | MS.gene98058 | PPI |
| MS.gene050867 | MS.gene98058 | PPI |
| MS.gene29333 | MS.gene98058 | PPI |
| MS.gene98058 | MS.gene072467 | PPI |
| MS.gene98058 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene98058 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98058.t1 | MTR_5g045620 | 94.358 | 514 | 29 | 0 | 1 | 514 | 147 | 660 | 0.0 | 1011 |
| MS.gene98058.t1 | MTR_5g044930 | 94.163 | 514 | 30 | 0 | 1 | 514 | 151 | 664 | 0.0 | 1009 |
| MS.gene98058.t1 | MTR_4g081540 | 33.929 | 336 | 210 | 6 | 185 | 512 | 454 | 785 | 1.84e-60 | 213 |
| MS.gene98058.t1 | MTR_1g066900 | 24.825 | 572 | 355 | 14 | 10 | 512 | 136 | 701 | 8.03e-40 | 154 |
| MS.gene98058.t1 | MTR_5g459290 | 91.228 | 57 | 5 | 0 | 22 | 78 | 26 | 82 | 6.46e-31 | 115 |
| MS.gene98058.t1 | MTR_4g099200 | 23.168 | 505 | 297 | 16 | 67 | 513 | 215 | 686 | 5.40e-29 | 121 |
| MS.gene98058.t1 | MTR_6g022260 | 23.138 | 376 | 265 | 9 | 54 | 422 | 147 | 505 | 4.99e-17 | 84.3 |
| MS.gene98058.t1 | MTR_1g048080 | 25.434 | 346 | 218 | 10 | 96 | 409 | 469 | 806 | 8.22e-17 | 84.3 |
| MS.gene98058.t1 | MTR_6g079590 | 23.698 | 384 | 257 | 10 | 65 | 437 | 233 | 591 | 1.71e-16 | 82.8 |
| MS.gene98058.t1 | MTR_6g078160 | 24.561 | 285 | 195 | 4 | 144 | 423 | 234 | 503 | 2.83e-16 | 82.0 |
| MS.gene98058.t1 | MTR_6g079920 | 22.246 | 463 | 310 | 11 | 58 | 486 | 107 | 553 | 8.54e-16 | 80.5 |
| MS.gene98058.t1 | MTR_1g050495 | 25.926 | 297 | 202 | 6 | 144 | 437 | 236 | 517 | 3.44e-15 | 78.6 |
| MS.gene98058.t1 | MTR_1g031720 | 24.650 | 357 | 251 | 8 | 66 | 419 | 309 | 650 | 4.67e-15 | 79.0 |
| MS.gene98058.t1 | MTR_5g090170 | 21.084 | 498 | 324 | 13 | 4 | 464 | 213 | 678 | 4.90e-15 | 78.6 |
| MS.gene98058.t1 | MTR_5g090170 | 21.084 | 498 | 324 | 13 | 4 | 464 | 213 | 678 | 5.12e-15 | 78.6 |
| MS.gene98058.t1 | MTR_1g068960 | 24.474 | 380 | 255 | 9 | 68 | 439 | 166 | 521 | 5.33e-15 | 78.6 |
| MS.gene98058.t1 | MTR_1g068960 | 23.056 | 360 | 228 | 10 | 51 | 409 | 254 | 565 | 7.37e-12 | 68.6 |
| MS.gene98058.t1 | MTR_6g079830 | 21.645 | 462 | 314 | 10 | 58 | 486 | 107 | 553 | 5.41e-15 | 78.2 |
| MS.gene98058.t1 | MTR_2g035630 | 21.769 | 294 | 218 | 4 | 144 | 437 | 236 | 517 | 2.01e-14 | 76.3 |
| MS.gene98058.t1 | MTR_6g078190 | 23.193 | 332 | 238 | 7 | 100 | 423 | 92 | 414 | 2.27e-14 | 75.9 |
| MS.gene98058.t1 | MTR_4g068360 | 23.837 | 344 | 242 | 10 | 67 | 406 | 250 | 577 | 2.81e-14 | 75.9 |
| MS.gene98058.t1 | MTR_2g049740 | 23.032 | 343 | 251 | 6 | 65 | 406 | 222 | 552 | 2.94e-14 | 76.3 |
| MS.gene98058.t1 | MTR_7g091410 | 22.222 | 414 | 283 | 10 | 67 | 469 | 149 | 534 | 3.27e-14 | 75.9 |
| MS.gene98058.t1 | MTR_7g091410 | 22.222 | 414 | 283 | 10 | 67 | 469 | 288 | 673 | 3.32e-14 | 75.9 |
| MS.gene98058.t1 | MTR_3g037490 | 24.706 | 340 | 222 | 9 | 96 | 418 | 219 | 541 | 3.38e-14 | 75.5 |
| MS.gene98058.t1 | MTR_7g091410 | 22.222 | 414 | 283 | 10 | 67 | 469 | 84 | 469 | 5.40e-14 | 75.1 |
| MS.gene98058.t1 | MTR_7g091410 | 22.222 | 414 | 283 | 10 | 67 | 469 | 43 | 428 | 7.96e-14 | 74.3 |
| MS.gene98058.t1 | MTR_6g079210 | 24.286 | 280 | 202 | 5 | 144 | 423 | 80 | 349 | 1.04e-13 | 73.2 |
| MS.gene98058.t1 | MTR_8g083130 | 24.365 | 394 | 266 | 10 | 67 | 456 | 125 | 490 | 1.11e-13 | 73.9 |
| MS.gene98058.t1 | MTR_7g103600 | 23.823 | 361 | 254 | 6 | 63 | 422 | 183 | 523 | 1.28e-13 | 73.9 |
| MS.gene98058.t1 | MTR_6g079250 | 22.615 | 283 | 203 | 6 | 144 | 423 | 80 | 349 | 4.14e-13 | 71.2 |
| MS.gene98058.t1 | MTR_6g079250 | 20.588 | 340 | 221 | 7 | 65 | 403 | 73 | 364 | 8.11e-11 | 64.3 |
| MS.gene98058.t1 | MTR_6g079180 | 23.929 | 280 | 203 | 5 | 144 | 423 | 80 | 349 | 4.69e-13 | 71.2 |
| MS.gene98058.t1 | MTR_3g061000 | 23.675 | 283 | 190 | 8 | 144 | 419 | 247 | 510 | 5.38e-13 | 71.6 |
| MS.gene98058.t1 | MTR_3g061000 | 23.361 | 244 | 169 | 4 | 238 | 476 | 157 | 387 | 7.15e-12 | 68.2 |
| MS.gene98058.t1 | MTR_6g079380 | 22.789 | 294 | 204 | 4 | 144 | 437 | 246 | 516 | 5.40e-13 | 71.6 |
| MS.gene98058.t1 | MTR_5g095130 | 22.642 | 212 | 159 | 4 | 226 | 436 | 593 | 800 | 6.82e-13 | 72.0 |
| MS.gene98058.t1 | MTR_2g026645 | 22.812 | 320 | 229 | 7 | 89 | 404 | 166 | 471 | 7.71e-13 | 71.6 |
| MS.gene98058.t1 | MTR_3g054110 | 20.134 | 447 | 312 | 6 | 79 | 494 | 116 | 548 | 7.74e-13 | 71.2 |
| MS.gene98058.t1 | MTR_4g133740 | 24.465 | 327 | 229 | 7 | 89 | 411 | 200 | 512 | 1.72e-12 | 70.5 |
| MS.gene98058.t1 | MTR_6g065540 | 24.528 | 318 | 206 | 8 | 144 | 455 | 248 | 537 | 1.92e-12 | 70.1 |
| MS.gene98058.t1 | MTR_0014s0250 | 23.434 | 431 | 251 | 16 | 53 | 414 | 75 | 495 | 1.97e-12 | 70.1 |
| MS.gene98058.t1 | MTR_6g077800 | 22.018 | 327 | 240 | 7 | 100 | 424 | 117 | 430 | 1.98e-12 | 69.7 |
| MS.gene98058.t1 | MTR_6g471100 | 22.487 | 378 | 240 | 13 | 67 | 405 | 241 | 604 | 2.71e-12 | 69.7 |
| MS.gene98058.t1 | MTR_1g108270 | 22.154 | 325 | 242 | 4 | 86 | 409 | 172 | 486 | 4.31e-12 | 68.9 |
| MS.gene98058.t1 | MTR_4g108060 | 22.319 | 345 | 245 | 8 | 69 | 406 | 165 | 493 | 5.57e-12 | 68.6 |
| MS.gene98058.t1 | MTR_1g045880 | 22.449 | 294 | 218 | 4 | 118 | 411 | 229 | 512 | 6.46e-12 | 68.6 |
| MS.gene98058.t1 | MTR_4g108060 | 21.994 | 341 | 251 | 6 | 69 | 406 | 31 | 359 | 6.46e-12 | 68.2 |
| MS.gene98058.t1 | MTR_2g037740 | 23.320 | 253 | 188 | 4 | 185 | 437 | 131 | 377 | 6.87e-12 | 68.6 |
| MS.gene98058.t1 | MTR_6g078210 | 23.881 | 201 | 150 | 2 | 237 | 437 | 334 | 531 | 8.63e-12 | 67.8 |
| MS.gene98058.t1 | MTR_7g095300 | 21.203 | 316 | 214 | 7 | 100 | 405 | 5 | 295 | 9.33e-12 | 66.2 |
| MS.gene98058.t1 | MTR_5g090210 | 25.496 | 353 | 202 | 11 | 65 | 410 | 409 | 707 | 1.70e-11 | 67.4 |
| MS.gene98058.t1 | MTR_5g090210 | 21.447 | 387 | 243 | 8 | 41 | 425 | 255 | 582 | 2.15e-11 | 67.0 |
| MS.gene98058.t1 | MTR_2g103520 | 23.510 | 302 | 206 | 5 | 177 | 476 | 175 | 453 | 1.76e-11 | 67.4 |
| MS.gene98058.t1 | MTR_8g105170 | 25.728 | 206 | 151 | 2 | 221 | 425 | 242 | 446 | 1.91e-11 | 67.4 |
| MS.gene98058.t1 | MTR_4g074390 | 22.093 | 344 | 245 | 8 | 70 | 406 | 166 | 493 | 2.20e-11 | 66.6 |
| MS.gene98058.t1 | MTR_5g045490 | 25.926 | 243 | 170 | 4 | 220 | 461 | 320 | 553 | 2.22e-11 | 67.0 |
| MS.gene98058.t1 | MTR_7g017570 | 23.358 | 274 | 166 | 6 | 261 | 492 | 254 | 525 | 2.22e-11 | 67.0 |
| MS.gene98058.t1 | MTR_7g011500 | 23.963 | 217 | 151 | 3 | 267 | 480 | 202 | 407 | 2.91e-11 | 66.6 |
| MS.gene98058.t1 | MTR_4g108650 | 21.802 | 344 | 249 | 7 | 67 | 406 | 249 | 576 | 2.98e-11 | 66.6 |
| MS.gene98058.t1 | MTR_6g072030 | 23.284 | 335 | 236 | 9 | 96 | 425 | 251 | 569 | 3.55e-11 | 66.2 |
| MS.gene98058.t1 | MTR_8g103480 | 21.662 | 337 | 234 | 5 | 86 | 411 | 129 | 446 | 5.51e-11 | 65.5 |
| MS.gene98058.t1 | MTR_0014s0180 | 21.671 | 383 | 270 | 11 | 100 | 476 | 91 | 449 | 6.30e-11 | 65.1 |
| MS.gene98058.t1 | MTR_6g080200 | 24.257 | 202 | 148 | 4 | 237 | 437 | 302 | 499 | 6.95e-11 | 65.1 |
| MS.gene98058.t1 | MTR_6g077540 | 19.543 | 481 | 336 | 11 | 56 | 500 | 104 | 569 | 7.28e-11 | 65.1 |
| MS.gene98058.t1 | MTR_7g007400 | 20.489 | 327 | 250 | 4 | 99 | 425 | 209 | 525 | 7.86e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98058.t1 | AT1G69290 | 65.310 | 516 | 173 | 4 | 1 | 514 | 147 | 658 | 0.0 | 703 |
| MS.gene98058.t1 | AT1G68980 | 59.339 | 514 | 196 | 4 | 1 | 514 | 119 | 619 | 0.0 | 627 |
| MS.gene98058.t1 | AT1G03100 | 34.718 | 337 | 211 | 6 | 183 | 513 | 460 | 793 | 2.79e-64 | 223 |
| MS.gene98058.t1 | AT3G09650 | 28.212 | 358 | 237 | 4 | 174 | 512 | 406 | 762 | 2.46e-43 | 164 |
| MS.gene98058.t1 | AT4G17616 | 26.336 | 262 | 159 | 5 | 226 | 487 | 416 | 643 | 1.34e-22 | 102 |
| MS.gene98058.t1 | AT1G62720 | 25.606 | 371 | 243 | 11 | 67 | 430 | 137 | 481 | 6.37e-18 | 87.0 |
| MS.gene98058.t1 | AT5G64320 | 22.772 | 505 | 306 | 15 | 3 | 462 | 229 | 694 | 2.59e-17 | 85.9 |
| MS.gene98058.t1 | AT3G54980 | 24.155 | 414 | 263 | 9 | 67 | 444 | 266 | 664 | 3.91e-17 | 85.5 |
| MS.gene98058.t1 | AT3G54980 | 24.155 | 414 | 263 | 9 | 67 | 444 | 266 | 664 | 3.91e-17 | 85.5 |
| MS.gene98058.t1 | AT1G12620 | 22.469 | 405 | 267 | 7 | 67 | 437 | 175 | 566 | 4.30e-17 | 84.7 |
| MS.gene98058.t1 | AT1G12620 | 23.214 | 336 | 241 | 7 | 79 | 411 | 116 | 437 | 3.60e-13 | 72.4 |
| MS.gene98058.t1 | AT1G64100 | 23.136 | 389 | 267 | 8 | 96 | 479 | 287 | 648 | 2.59e-16 | 82.8 |
| MS.gene98058.t1 | AT1G64100 | 24.398 | 332 | 216 | 10 | 94 | 425 | 165 | 461 | 2.41e-12 | 70.1 |
| MS.gene98058.t1 | AT1G64583 | 24.784 | 347 | 219 | 7 | 92 | 405 | 128 | 465 | 3.49e-16 | 81.6 |
| MS.gene98058.t1 | AT1G64583 | 26.754 | 228 | 158 | 4 | 196 | 416 | 82 | 307 | 1.12e-11 | 67.4 |
| MS.gene98058.t1 | AT1G64583 | 24.784 | 347 | 219 | 7 | 92 | 405 | 103 | 440 | 4.94e-16 | 81.3 |
| MS.gene98058.t1 | AT1G64583 | 26.754 | 228 | 158 | 4 | 196 | 416 | 57 | 282 | 1.44e-11 | 67.0 |
| MS.gene98058.t1 | AT1G64100 | 23.200 | 375 | 256 | 8 | 96 | 465 | 287 | 634 | 5.33e-16 | 81.6 |
| MS.gene98058.t1 | AT1G64100 | 24.398 | 332 | 216 | 10 | 94 | 425 | 165 | 461 | 2.69e-12 | 69.7 |
| MS.gene98058.t1 | AT1G64100 | 23.200 | 375 | 256 | 8 | 96 | 465 | 287 | 634 | 5.33e-16 | 81.6 |
| MS.gene98058.t1 | AT1G64100 | 24.398 | 332 | 216 | 10 | 94 | 425 | 165 | 461 | 2.69e-12 | 69.7 |
| MS.gene98058.t1 | AT5G04810 | 23.317 | 416 | 264 | 9 | 96 | 472 | 475 | 874 | 7.17e-16 | 81.3 |
| MS.gene98058.t1 | AT1G63330 | 26.174 | 298 | 198 | 7 | 138 | 431 | 217 | 496 | 2.63e-15 | 79.0 |
| MS.gene98058.t1 | AT1G63330 | 21.765 | 340 | 244 | 8 | 96 | 429 | 36 | 359 | 9.18e-11 | 64.7 |
| MS.gene98058.t1 | AT1G63330 | 26.174 | 298 | 198 | 7 | 138 | 431 | 217 | 496 | 2.63e-15 | 79.0 |
| MS.gene98058.t1 | AT1G63330 | 21.765 | 340 | 244 | 8 | 96 | 429 | 36 | 359 | 9.18e-11 | 64.7 |
| MS.gene98058.t1 | AT1G63330 | 26.174 | 298 | 198 | 7 | 138 | 431 | 217 | 496 | 2.63e-15 | 79.0 |
| MS.gene98058.t1 | AT1G63330 | 21.765 | 340 | 244 | 8 | 96 | 429 | 36 | 359 | 9.18e-11 | 64.7 |
| MS.gene98058.t1 | AT3G53700 | 22.306 | 399 | 286 | 8 | 67 | 462 | 187 | 564 | 3.41e-15 | 79.0 |
| MS.gene98058.t1 | AT1G12300 | 23.985 | 271 | 192 | 5 | 171 | 437 | 322 | 582 | 3.74e-15 | 79.0 |
| MS.gene98058.t1 | AT1G12300 | 21.594 | 389 | 277 | 9 | 93 | 476 | 146 | 511 | 1.26e-12 | 70.9 |
| MS.gene98058.t1 | AT1G12700 | 23.301 | 412 | 295 | 10 | 67 | 477 | 207 | 598 | 1.02e-14 | 77.4 |
| MS.gene98058.t1 | AT1G12700 | 23.132 | 281 | 205 | 6 | 131 | 411 | 165 | 434 | 3.47e-11 | 66.2 |
| MS.gene98058.t1 | AT1G12700 | 23.301 | 412 | 295 | 10 | 67 | 477 | 207 | 598 | 1.02e-14 | 77.4 |
| MS.gene98058.t1 | AT1G12700 | 23.132 | 281 | 205 | 6 | 131 | 411 | 165 | 434 | 3.47e-11 | 66.2 |
| MS.gene98058.t1 | AT1G12700 | 23.301 | 412 | 295 | 10 | 67 | 477 | 191 | 582 | 1.07e-14 | 77.4 |
| MS.gene98058.t1 | AT1G12700 | 23.132 | 281 | 205 | 6 | 131 | 411 | 149 | 418 | 3.53e-11 | 66.2 |
| MS.gene98058.t1 | AT1G19520 | 22.360 | 322 | 232 | 8 | 86 | 403 | 400 | 707 | 1.87e-14 | 76.6 |
| MS.gene98058.t1 | AT1G62590 | 26.174 | 298 | 198 | 7 | 138 | 431 | 292 | 571 | 1.94e-14 | 76.6 |
| MS.gene98058.t1 | AT1G62590 | 23.383 | 402 | 281 | 14 | 80 | 476 | 129 | 508 | 3.29e-11 | 66.2 |
| MS.gene98058.t1 | AT1G62590 | 26.174 | 298 | 198 | 7 | 138 | 431 | 292 | 571 | 1.94e-14 | 76.6 |
| MS.gene98058.t1 | AT1G62590 | 23.383 | 402 | 281 | 14 | 80 | 476 | 129 | 508 | 3.29e-11 | 66.2 |
| MS.gene98058.t1 | AT5G38730 | 26.222 | 225 | 157 | 4 | 226 | 450 | 209 | 424 | 7.63e-14 | 74.7 |
| MS.gene98058.t1 | AT1G62680 | 25.641 | 195 | 135 | 3 | 229 | 417 | 132 | 322 | 8.16e-14 | 74.3 |
| MS.gene98058.t1 | AT1G62680 | 21.676 | 346 | 248 | 9 | 86 | 425 | 171 | 499 | 9.20e-12 | 67.8 |
| MS.gene98058.t1 | AT1G62680 | 25.641 | 195 | 135 | 3 | 229 | 417 | 132 | 322 | 8.16e-14 | 74.3 |
| MS.gene98058.t1 | AT1G62680 | 21.676 | 346 | 248 | 9 | 86 | 425 | 171 | 499 | 9.20e-12 | 67.8 |
| MS.gene98058.t1 | AT3G22470 | 29.060 | 234 | 151 | 6 | 238 | 469 | 368 | 588 | 1.09e-13 | 73.9 |
| MS.gene98058.t1 | AT3G22470 | 24.085 | 328 | 222 | 8 | 92 | 411 | 127 | 435 | 1.60e-12 | 70.5 |
| MS.gene98058.t1 | AT1G63080 | 25.490 | 204 | 145 | 2 | 225 | 425 | 210 | 409 | 1.14e-13 | 73.9 |
| MS.gene98058.t1 | AT1G63080 | 22.418 | 397 | 266 | 12 | 92 | 476 | 122 | 488 | 3.41e-12 | 69.3 |
| MS.gene98058.t1 | AT1G63080 | 25.490 | 204 | 145 | 2 | 225 | 425 | 210 | 409 | 1.14e-13 | 73.9 |
| MS.gene98058.t1 | AT1G63080 | 22.418 | 397 | 266 | 12 | 92 | 476 | 122 | 488 | 3.41e-12 | 69.3 |
| MS.gene98058.t1 | AT1G63080 | 25.490 | 204 | 145 | 2 | 225 | 425 | 210 | 409 | 1.14e-13 | 73.9 |
| MS.gene98058.t1 | AT1G63080 | 22.418 | 397 | 266 | 12 | 92 | 476 | 122 | 488 | 3.41e-12 | 69.3 |
| MS.gene98058.t1 | AT5G39710 | 22.005 | 409 | 289 | 13 | 23 | 425 | 165 | 549 | 1.25e-13 | 73.9 |
| MS.gene98058.t1 | AT5G61400 | 23.318 | 223 | 164 | 2 | 206 | 425 | 185 | 403 | 1.51e-13 | 73.6 |
| MS.gene98058.t1 | AT5G61990 | 22.365 | 389 | 224 | 8 | 88 | 406 | 470 | 850 | 2.14e-13 | 73.6 |
| MS.gene98058.t1 | AT5G61990 | 22.619 | 168 | 123 | 2 | 261 | 425 | 563 | 726 | 3.68e-11 | 66.2 |
| MS.gene98058.t1 | AT5G61990 | 22.269 | 238 | 173 | 4 | 179 | 412 | 309 | 538 | 5.03e-11 | 65.9 |
| MS.gene98058.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 317 | 666 | 3.36e-13 | 72.8 |
| MS.gene98058.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 317 | 666 | 3.78e-13 | 72.8 |
| MS.gene98058.t1 | AT2G41720 | 19.837 | 368 | 277 | 6 | 102 | 469 | 185 | 534 | 3.80e-13 | 72.4 |
| MS.gene98058.t1 | AT1G62670 | 24.908 | 273 | 187 | 6 | 138 | 406 | 288 | 546 | 4.90e-13 | 72.0 |
| MS.gene98058.t1 | AT1G62670 | 24.908 | 273 | 187 | 6 | 138 | 406 | 288 | 546 | 4.90e-13 | 72.0 |
| MS.gene98058.t1 | AT4G11690 | 22.590 | 363 | 223 | 9 | 104 | 425 | 162 | 507 | 5.15e-13 | 72.0 |
| MS.gene98058.t1 | AT3G16710 | 30.939 | 181 | 123 | 2 | 226 | 405 | 123 | 302 | 5.93e-13 | 71.6 |
| MS.gene98058.t1 | AT3G16710 | 22.099 | 362 | 260 | 8 | 67 | 423 | 151 | 495 | 8.89e-13 | 70.9 |
| MS.gene98058.t1 | AT3G16710 | 30.939 | 181 | 123 | 2 | 226 | 405 | 123 | 302 | 6.08e-13 | 71.2 |
| MS.gene98058.t1 | AT1G05670 | 21.676 | 346 | 253 | 7 | 67 | 406 | 238 | 571 | 7.62e-13 | 71.6 |
| MS.gene98058.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 6.06e-12 | 68.9 |
| MS.gene98058.t1 | AT1G05670 | 21.676 | 346 | 253 | 7 | 67 | 406 | 238 | 571 | 7.62e-13 | 71.6 |
| MS.gene98058.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 6.06e-12 | 68.9 |
| MS.gene98058.t1 | AT1G05670 | 21.676 | 346 | 253 | 7 | 67 | 406 | 238 | 571 | 7.62e-13 | 71.6 |
| MS.gene98058.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 6.06e-12 | 68.9 |
| MS.gene98058.t1 | AT1G63130 | 24.686 | 239 | 168 | 4 | 172 | 406 | 316 | 546 | 7.94e-13 | 71.2 |
| MS.gene98058.t1 | AT1G63130 | 21.117 | 412 | 267 | 11 | 67 | 476 | 149 | 504 | 2.95e-12 | 69.7 |
| MS.gene98058.t1 | AT1G63130 | 24.686 | 239 | 168 | 4 | 172 | 406 | 316 | 546 | 7.94e-13 | 71.2 |
| MS.gene98058.t1 | AT1G63130 | 21.117 | 412 | 267 | 11 | 67 | 476 | 149 | 504 | 2.95e-12 | 69.7 |
| MS.gene98058.t1 | AT1G64580 | 23.499 | 383 | 251 | 10 | 94 | 444 | 138 | 510 | 9.45e-13 | 70.9 |
| MS.gene98058.t1 | AT1G22960 | 24.566 | 403 | 265 | 15 | 45 | 430 | 310 | 690 | 9.55e-13 | 71.2 |
| MS.gene98058.t1 | AT1G22960 | 24.566 | 403 | 265 | 15 | 45 | 430 | 310 | 690 | 9.55e-13 | 71.2 |
| MS.gene98058.t1 | AT1G63400 | 22.059 | 340 | 243 | 8 | 96 | 429 | 111 | 434 | 1.01e-12 | 70.9 |
| MS.gene98058.t1 | AT1G63400 | 24.242 | 264 | 184 | 5 | 172 | 431 | 320 | 571 | 6.77e-12 | 68.6 |
| MS.gene98058.t1 | AT1G62910 | 24.915 | 293 | 196 | 8 | 144 | 431 | 296 | 569 | 1.47e-12 | 70.5 |
| MS.gene98058.t1 | AT1G62910 | 21.944 | 360 | 265 | 8 | 67 | 424 | 151 | 496 | 1.83e-11 | 67.0 |
| MS.gene98058.t1 | AT1G62910 | 22.807 | 342 | 238 | 9 | 96 | 429 | 109 | 432 | 1.95e-11 | 67.0 |
| MS.gene98058.t1 | AT4G26800 | 24.189 | 339 | 241 | 9 | 67 | 403 | 156 | 480 | 1.53e-12 | 70.1 |
| MS.gene98058.t1 | AT1G79080 | 27.320 | 194 | 134 | 3 | 236 | 423 | 227 | 419 | 1.57e-12 | 70.5 |
| MS.gene98058.t1 | AT4G26800 | 24.189 | 339 | 241 | 9 | 67 | 403 | 11 | 335 | 1.89e-12 | 69.3 |
| MS.gene98058.t1 | AT4G26800 | 24.189 | 339 | 241 | 9 | 67 | 403 | 81 | 405 | 1.93e-12 | 69.7 |
| MS.gene98058.t1 | AT4G16390 | 24.375 | 320 | 224 | 8 | 89 | 404 | 194 | 499 | 1.96e-12 | 70.1 |
| MS.gene98058.t1 | AT1G12775 | 22.321 | 336 | 244 | 7 | 79 | 411 | 132 | 453 | 3.50e-12 | 69.3 |
| MS.gene98058.t1 | AT1G12775 | 22.895 | 380 | 256 | 9 | 67 | 437 | 191 | 542 | 4.59e-12 | 68.9 |
| MS.gene98058.t1 | AT1G52620 | 24.455 | 413 | 234 | 14 | 66 | 410 | 167 | 569 | 3.53e-12 | 69.7 |
| MS.gene98058.t1 | AT3G61520 | 22.121 | 330 | 240 | 6 | 101 | 426 | 366 | 682 | 3.92e-12 | 69.3 |
| MS.gene98058.t1 | AT1G63150 | 22.330 | 412 | 256 | 13 | 67 | 471 | 151 | 505 | 4.44e-12 | 68.9 |
| MS.gene98058.t1 | AT1G63150 | 21.311 | 366 | 255 | 9 | 96 | 456 | 109 | 446 | 6.46e-12 | 68.6 |
| MS.gene98058.t1 | AT1G63150 | 22.330 | 412 | 256 | 13 | 67 | 471 | 151 | 505 | 4.44e-12 | 68.9 |
| MS.gene98058.t1 | AT1G63150 | 21.311 | 366 | 255 | 9 | 96 | 456 | 109 | 446 | 6.46e-12 | 68.6 |
| MS.gene98058.t1 | AT4G19440 | 21.892 | 370 | 249 | 7 | 86 | 423 | 359 | 720 | 4.79e-12 | 69.3 |
| MS.gene98058.t1 | AT4G19440 | 21.892 | 370 | 249 | 7 | 86 | 423 | 359 | 720 | 4.79e-12 | 69.3 |
| MS.gene98058.t1 | AT4G19440 | 21.892 | 370 | 249 | 7 | 86 | 423 | 359 | 720 | 4.79e-12 | 69.3 |
| MS.gene98058.t1 | AT4G19440 | 21.892 | 370 | 249 | 7 | 86 | 423 | 359 | 720 | 4.79e-12 | 69.3 |
| MS.gene98058.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 26 | 192 | 5.71e-12 | 68.2 |
| MS.gene98058.t1 | AT1G62930 | 24.268 | 239 | 169 | 4 | 172 | 406 | 315 | 545 | 5.71e-12 | 68.6 |
| MS.gene98058.t1 | AT1G62930 | 24.485 | 388 | 269 | 12 | 92 | 476 | 137 | 503 | 2.15e-11 | 67.0 |
| MS.gene98058.t1 | AT3G06920 | 21.327 | 211 | 163 | 2 | 226 | 436 | 558 | 765 | 5.75e-12 | 68.9 |
| MS.gene98058.t1 | AT5G14770 | 22.110 | 493 | 304 | 19 | 47 | 494 | 32 | 489 | 7.24e-12 | 68.6 |
| MS.gene98058.t1 | AT5G14770 | 22.110 | 493 | 304 | 19 | 47 | 494 | 32 | 489 | 7.24e-12 | 68.6 |
| MS.gene98058.t1 | AT5G14770 | 22.110 | 493 | 304 | 19 | 47 | 494 | 32 | 489 | 7.24e-12 | 68.6 |
| MS.gene98058.t1 | AT5G14770 | 22.110 | 493 | 304 | 19 | 47 | 494 | 32 | 489 | 7.24e-12 | 68.6 |
| MS.gene98058.t1 | AT5G14770 | 22.110 | 493 | 304 | 19 | 47 | 494 | 32 | 489 | 7.24e-12 | 68.6 |
| MS.gene98058.t1 | AT5G28370 | 22.121 | 330 | 240 | 6 | 101 | 426 | 366 | 682 | 7.39e-12 | 68.6 |
| MS.gene98058.t1 | AT3G06920 | 21.327 | 211 | 163 | 2 | 226 | 436 | 572 | 779 | 7.45e-12 | 68.6 |
| MS.gene98058.t1 | AT3G06920 | 21.327 | 211 | 163 | 2 | 226 | 436 | 572 | 779 | 7.45e-12 | 68.6 |
| MS.gene98058.t1 | AT5G28460 | 22.121 | 330 | 240 | 6 | 101 | 426 | 366 | 682 | 7.66e-12 | 68.6 |
| MS.gene98058.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 126 | 292 | 8.06e-12 | 68.2 |
| MS.gene98058.t1 | AT3G07290 | 24.384 | 365 | 253 | 9 | 54 | 414 | 359 | 704 | 8.11e-12 | 68.6 |
| MS.gene98058.t1 | AT5G41170 | 26.786 | 168 | 122 | 1 | 239 | 406 | 126 | 292 | 8.51e-12 | 67.8 |
| MS.gene98058.t1 | AT3G09060 | 23.304 | 339 | 193 | 9 | 144 | 419 | 293 | 627 | 9.04e-12 | 68.2 |
| MS.gene98058.t1 | AT3G09060 | 23.304 | 339 | 193 | 9 | 144 | 419 | 293 | 627 | 9.04e-12 | 68.2 |
| MS.gene98058.t1 | AT1G13040 | 20.472 | 381 | 285 | 6 | 67 | 447 | 147 | 509 | 9.51e-12 | 67.8 |
| MS.gene98058.t1 | AT1G13040 | 20.472 | 381 | 285 | 6 | 67 | 447 | 147 | 509 | 9.51e-12 | 67.8 |
| MS.gene98058.t1 | AT5G50280 | 23.462 | 260 | 190 | 3 | 209 | 467 | 333 | 584 | 1.70e-11 | 67.4 |
| MS.gene98058.t1 | AT5G27270 | 22.798 | 386 | 243 | 11 | 86 | 441 | 651 | 1011 | 1.98e-11 | 67.4 |
| MS.gene98058.t1 | AT2G39230 | 26.404 | 178 | 131 | 0 | 234 | 411 | 463 | 640 | 2.47e-11 | 67.0 |
| MS.gene98058.t1 | AT5G27270 | 22.798 | 386 | 243 | 11 | 86 | 441 | 446 | 806 | 3.04e-11 | 66.6 |
| MS.gene98058.t1 | AT5G27270 | 22.798 | 386 | 243 | 11 | 86 | 441 | 446 | 806 | 3.04e-11 | 66.6 |
| MS.gene98058.t1 | AT5G65560 | 22.145 | 429 | 273 | 13 | 65 | 481 | 389 | 768 | 4.79e-11 | 65.9 |
| MS.gene98058.t1 | AT5G65560 | 22.145 | 429 | 273 | 13 | 65 | 481 | 389 | 768 | 4.79e-11 | 65.9 |
| MS.gene98058.t1 | AT5G65560 | 22.145 | 429 | 273 | 13 | 65 | 481 | 389 | 768 | 4.79e-11 | 65.9 |
| MS.gene98058.t1 | AT1G62914 | 24.402 | 209 | 150 | 3 | 225 | 429 | 223 | 427 | 7.16e-11 | 65.1 |
Find 94 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATTTATATGCACTTAA+AGG | 0.150295 | 5.4:-36182415 | MS.gene98058:CDS |
| TGGGAGGCTCTGTGGGTCTT+GGG | 0.176003 | 5.4:-36182003 | MS.gene98058:CDS |
| TTGGGAGGCTCTGTGGGTCT+TGG | 0.177689 | 5.4:-36182004 | MS.gene98058:CDS |
| TCTTCATAAGGGAAATATTA+AGG | 0.192767 | 5.4:-36182173 | MS.gene98058:CDS |
| CTCTTCAAACAGAGGTAAAA+AGG | 0.300848 | 5.4:+36182615 | None:intergenic |
| AAGCCTGATGTGTTTAGTTT+TGG | 0.305298 | 5.4:-36182445 | MS.gene98058:CDS |
| GAGATGATGTAGAGGAAGTT+TGG | 0.312610 | 5.4:-36182237 | MS.gene98058:CDS |
| CCGAAACATATCCGTTAATC+AGG | 0.334305 | 5.4:+36181546 | None:intergenic |
| CTTCATAAGGGAAATATTAA+GGG | 0.341682 | 5.4:-36182172 | MS.gene98058:CDS |
| TGAAAATATTTGTTGATAAG+TGG | 0.364460 | 5.4:-36181349 | MS.gene98058:CDS |
| GGAATGCATCAACCAGATTC+TGG | 0.365582 | 5.4:+36181438 | None:intergenic |
| GACTATAATGACAGGTTTGA+TGG | 0.371498 | 5.4:-36181762 | MS.gene98058:CDS |
| CTTATTTATATGCACTTAAA+GGG | 0.372712 | 5.4:-36182414 | MS.gene98058:CDS |
| GATCAAATTTGACCAGAATC+TGG | 0.372731 | 5.4:-36181450 | MS.gene98058:CDS |
| AGCTCAAAGTGGCCAGGTTA+AGG | 0.380872 | 5.4:-36181292 | MS.gene98058:CDS |
| GGTTGCTTTGGATGACAAAC+TGG | 0.389356 | 5.4:-36182584 | MS.gene98058:CDS |
| TTTGATTACTGGCTATGTTA+AGG | 0.389744 | 5.4:-36182311 | MS.gene98058:CDS |
| AACTGCAGACGCTACTCTAT+TGG | 0.390985 | 5.4:-36181939 | MS.gene98058:CDS |
| ACTTACTTGTCCCTGATTAA+CGG | 0.399293 | 5.4:-36181557 | MS.gene98058:CDS |
| CCTGATTAACGGATATGTTT+CGG | 0.401301 | 5.4:-36181546 | MS.gene98058:CDS |
| TGTTTCTATCAGAGCATCAT+AGG | 0.407915 | 5.4:+36181874 | None:intergenic |
| AGAGAACTGCAGGGTTGCTT+TGG | 0.408506 | 5.4:-36182596 | MS.gene98058:CDS |
| GAGATACAAGCAAGCGTTCA+TGG | 0.416295 | 5.4:-36181327 | MS.gene98058:CDS |
| GGGAGGCTCTGTGGGTCTTG+GGG | 0.421493 | 5.4:-36182002 | MS.gene98058:CDS |
| GACAAGTAAGTCTGGTCATT+CGG | 0.422887 | 5.4:+36181569 | None:intergenic |
| CTTGATGAGATGAATGCTTT+GGG | 0.425114 | 5.4:-36182022 | MS.gene98058:CDS |
| GTGACGGAGATTAGTAGTTC+AGG | 0.428125 | 5.4:-36181917 | MS.gene98058:CDS |
| TCTTGATGAGATGAATGCTT+TGG | 0.429748 | 5.4:-36182023 | MS.gene98058:CDS |
| CTCTGTTTGAAGAGAACTGC+AGG | 0.432019 | 5.4:-36182606 | MS.gene98058:CDS |
| TGGTCAAATTTGATCCCCTT+CGG | 0.433100 | 5.4:+36181458 | None:intergenic |
| CTCTGTTTAGGGACATGAGA+GGG | 0.436667 | 5.4:-36181817 | MS.gene98058:CDS |
| GGTCTATGTGCCGATCTTGA+AGG | 0.443651 | 5.4:-36181981 | MS.gene98058:CDS |
| GTTGACGAGTCTATAGGTTT+CGG | 0.444814 | 5.4:-36182097 | MS.gene98058:CDS |
| GGTCATTCGGCTCGAAGTGC+AGG | 0.453085 | 5.4:+36181582 | None:intergenic |
| GTAAATGCTTGTGTTAGTAT+TGG | 0.455819 | 5.4:-36182070 | MS.gene98058:CDS |
| ACACCGCCCCACAAATGAAA+AGG | 0.455909 | 5.4:+36182676 | None:intergenic |
| ATCAAAGTTGACGAGTCTAT+AGG | 0.458638 | 5.4:-36182103 | MS.gene98058:CDS |
| AATGCTTTGGGAGGCTCTGT+GGG | 0.462220 | 5.4:-36182010 | MS.gene98058:CDS |
| GAACCATCGACCTGAGTTGA+TGG | 0.464968 | 5.4:-36181738 | MS.gene98058:CDS |
| TTGAAGTAGGTACTCATGAT+TGG | 0.467602 | 5.4:-36181679 | MS.gene98058:CDS |
| AGTTGAGGAATATCTTCATA+AGG | 0.468780 | 5.4:-36182185 | MS.gene98058:CDS |
| TTTCTTAGATGAGGTGGTTG+AGG | 0.470772 | 5.4:-36181711 | MS.gene98058:CDS |
| ACTGATGCTGACAGAGTTGT+TGG | 0.473786 | 5.4:-36182490 | MS.gene98058:CDS |
| ATCAGGCTTAACACCGAGCT+TGG | 0.475678 | 5.4:+36182459 | None:intergenic |
| ATTACTGGCTATGTTAAGGC+TGG | 0.478007 | 5.4:-36182307 | MS.gene98058:CDS |
| CTGAAAGTCTTGACCGGACA+TGG | 0.478163 | 5.4:+36181850 | None:intergenic |
| AATCCAAAACTAAACACATC+AGG | 0.490880 | 5.4:+36182442 | None:intergenic |
| GATTATTGAAGCTCAGAAGT+TGG | 0.498137 | 5.4:-36182137 | MS.gene98058:CDS |
| GTTGAGGAATATCTTCATAA+GGG | 0.508376 | 5.4:-36182184 | MS.gene98058:CDS |
| TAATCAGGGACAAGTAAGTC+TGG | 0.511372 | 5.4:+36181561 | None:intergenic |
| AACTCTGTCAGCATCAGTTA+CGG | 0.514036 | 5.4:+36182495 | None:intergenic |
| GGCAGCTTTCTTAGATGAGG+TGG | 0.521040 | 5.4:-36181717 | MS.gene98058:CDS |
| GAATGCTTTGGGAGGCTCTG+TGG | 0.523683 | 5.4:-36182011 | MS.gene98058:CDS |
| CACCGCCCCACAAATGAAAA+GGG | 0.527747 | 5.4:+36182677 | None:intergenic |
| TTGCAGTAAGCCTTCAAGAT+CGG | 0.528610 | 5.4:+36181971 | None:intergenic |
| TAGGGACATGAGAGGGGCGA+GGG | 0.531432 | 5.4:-36181810 | MS.gene98058:CDS |
| TAGTAGTTCAGGTCTAAAGT+TGG | 0.534004 | 5.4:-36181906 | MS.gene98058:CDS |
| CTCCCTTGACCATAGCATAC+AGG | 0.534135 | 5.4:+36181417 | None:intergenic |
| CTGATAGAAACATCCATGTC+CGG | 0.534600 | 5.4:-36181863 | MS.gene98058:CDS |
| TTAGGGACATGAGAGGGGCG+AGG | 0.535492 | 5.4:-36181811 | MS.gene98058:CDS |
| AGTTATTTGACTATAATGAC+AGG | 0.547994 | 5.4:-36181770 | MS.gene98058:CDS |
| AATGAAAAGGGATAAAGAAA+CGG | 0.553013 | 5.4:+36182689 | None:intergenic |
| GAGGATCCTCGTATTGAAGT+AGG | 0.566574 | 5.4:-36181692 | MS.gene98058:CDS |
| GCATTGCAAGCAGAAACATC+AGG | 0.569511 | 5.4:+36182550 | None:intergenic |
| TGTGATGATGTTGTGGAACA+AGG | 0.569684 | 5.4:-36181507 | MS.gene98058:CDS |
| ATTCCTGTATGCTATGGTCA+AGG | 0.570553 | 5.4:-36181420 | MS.gene98058:CDS |
| AAGAAAGCTGCCATCAACTC+AGG | 0.577664 | 5.4:+36181728 | None:intergenic |
| TGATGCATTCCTGTATGCTA+TGG | 0.578318 | 5.4:-36181426 | MS.gene98058:CDS |
| GGATTCAAGATGAAAACAGC+AGG | 0.580492 | 5.4:+36182516 | None:intergenic |
| GAATGATAGAGATGATGTAG+AGG | 0.581566 | 5.4:-36182245 | MS.gene98058:CDS |
| GTTGGAATTATGTCCAAGCT+CGG | 0.583093 | 5.4:-36182472 | MS.gene98058:CDS |
| AGGGTTACAAGATAAGATAG+AGG | 0.584722 | 5.4:-36182395 | MS.gene98058:CDS |
| ATGCAAGAAGGACTTTCAGA+AGG | 0.589614 | 5.4:-36181613 | MS.gene98058:CDS |
| AAGGTTAAGAGAAAGTTAGC+GGG | 0.590325 | 5.4:-36181488 | MS.gene98058:CDS |
| TTCCTGTATGCTATGGTCAA+GGG | 0.590606 | 5.4:-36181419 | MS.gene98058:CDS |
| GAAGGCTAGAAGATGCAAGA+AGG | 0.590984 | 5.4:-36181625 | MS.gene98058:CDS |
| TACCGACTGAAAGTCTTGAC+CGG | 0.591099 | 5.4:+36181844 | None:intergenic |
| GATGGCAGCTTTCTTAGATG+AGG | 0.600387 | 5.4:-36181720 | MS.gene98058:CDS |
| CTGCCATCAACTCAGGTCGA+TGG | 0.604479 | 5.4:+36181735 | None:intergenic |
| TTCAGGTCTAAAGTTGGACG+TGG | 0.606771 | 5.4:-36181900 | MS.gene98058:CDS |
| TGATGCTGTGATGCAAGTTG+TGG | 0.610490 | 5.4:-36181387 | MS.gene98058:CDS |
| GATGAGATGAATGCTTTGGG+AGG | 0.611114 | 5.4:-36182019 | MS.gene98058:CDS |
| CGAAACATATCCGTTAATCA+GGG | 0.620823 | 5.4:+36181547 | None:intergenic |
| TCTGTTTAGGGACATGAGAG+GGG | 0.625777 | 5.4:-36181816 | MS.gene98058:CDS |
| CTGTATGCTATGGTCAAGGG+AGG | 0.634721 | 5.4:-36181416 | MS.gene98058:CDS |
| TCTCTGTTTAGGGACATGAG+AGG | 0.635397 | 5.4:-36181818 | MS.gene98058:CDS |
| CAAGGTTAAGAGAAAGTTAG+CGG | 0.639319 | 5.4:-36181489 | MS.gene98058:CDS |
| TCTGTTTGAAGAGAACTGCA+GGG | 0.643992 | 5.4:-36182605 | MS.gene98058:CDS |
| AGACGCTACTCTATTGGTGA+CGG | 0.651032 | 5.4:-36181933 | MS.gene98058:CDS |
| GTCCGGTCAAGACTTTCAGT+CGG | 0.666282 | 5.4:-36181846 | MS.gene98058:CDS |
| AGGTTAAGAGAAAGTTAGCG+GGG | 0.675886 | 5.4:-36181487 | MS.gene98058:CDS |
| CTGCAGTTCTCTTCAAACAG+AGG | 0.680462 | 5.4:+36182607 | None:intergenic |
| GGTTAAGAGAAAGTTAGCGG+GGG | 0.720845 | 5.4:-36181486 | MS.gene98058:CDS |
| TGAGTACCTACTTCAATACG+AGG | 0.729121 | 5.4:+36181686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAACATTTATTGTTTT+TGG | + | chr5.4:36181638-36181657 | None:intergenic | 10.0% |
| !!! | TTTTATTCTAATTTGATTAC+TGG | - | chr5.4:36181652-36181671 | MS.gene98058:CDS | 15.0% |
| !! | CTTATTTATATGCACTTAAA+GGG | - | chr5.4:36181560-36181579 | MS.gene98058:CDS | 20.0% |
| !!! | TGAAAATATTTGTTGATAAG+TGG | - | chr5.4:36182625-36182644 | MS.gene98058:CDS | 20.0% |
| ! | AATGAAAAGGGATAAAGAAA+CGG | + | chr5.4:36181288-36181307 | None:intergenic | 25.0% |
| ! | AGTTATTTGACTATAATGAC+AGG | - | chr5.4:36182204-36182223 | MS.gene98058:CDS | 25.0% |
| ! | CTTCATAAGGGAAATATTAA+GGG | - | chr5.4:36181802-36181821 | MS.gene98058:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | - | chr5.4:36182704-36182723 | MS.gene98058:CDS | 25.0% |
| ! | GCTTATTTATATGCACTTAA+AGG | - | chr5.4:36181559-36181578 | MS.gene98058:CDS | 25.0% |
| ! | TCTTCATAAGGGAAATATTA+AGG | - | chr5.4:36181801-36181820 | MS.gene98058:CDS | 25.0% |
| !!! | GCTTATTGCTTTTAAGAATT+GGG | - | chr5.4:36182731-36182750 | MS.gene98058:CDS | 25.0% |
| AATCCAAAACTAAACACATC+AGG | + | chr5.4:36181535-36181554 | None:intergenic | 30.0% | |
| AGTTGAGGAATATCTTCATA+AGG | - | chr5.4:36181789-36181808 | MS.gene98058:CDS | 30.0% | |
| GTAAATGCTTGTGTTAGTAT+TGG | - | chr5.4:36181904-36181923 | MS.gene98058:CDS | 30.0% | |
| GTTGAGGAATATCTTCATAA+GGG | - | chr5.4:36181790-36181809 | MS.gene98058:CDS | 30.0% | |
| ! | CTTTATCCCTTTTCATTTGT+GGG | - | chr5.4:36181291-36181310 | MS.gene98058:CDS | 30.0% |
| ! | TCTTTATCCCTTTTCATTTG+TGG | - | chr5.4:36181290-36181309 | MS.gene98058:CDS | 30.0% |
| ! | TTTATCCCTTTTCATTTGTG+GGG | - | chr5.4:36181292-36181311 | MS.gene98058:CDS | 30.0% |
| ! | TTTGATTACTGGCTATGTTA+AGG | - | chr5.4:36181663-36181682 | MS.gene98058:CDS | 30.0% |
| !! | AAAGTTTTGATGCTTGGTTT+TGG | - | chr5.4:36181607-36181626 | MS.gene98058:CDS | 30.0% |
| !! | ATTTTGATGTGATGATGTTG+TGG | - | chr5.4:36182460-36182479 | MS.gene98058:CDS | 30.0% |
| !! | CACTTTTTGTTTAGTAGTTG+AGG | - | chr5.4:36181774-36181793 | MS.gene98058:CDS | 30.0% |
| !! | CGCTTATTGCTTTTAAGAAT+TGG | - | chr5.4:36182730-36182749 | MS.gene98058:CDS | 30.0% |
| !! | GAGTTAAAAGTTTTGATGCT+TGG | - | chr5.4:36181601-36181620 | MS.gene98058:CDS | 30.0% |
| AAGGTTAAGAGAAAGTTAGC+GGG | - | chr5.4:36182486-36182505 | MS.gene98058:CDS | 35.0% | |
| ACTTACTTGTCCCTGATTAA+CGG | - | chr5.4:36182417-36182436 | MS.gene98058:CDS | 35.0% | |
| AGGGTTACAAGATAAGATAG+AGG | - | chr5.4:36181579-36181598 | MS.gene98058:CDS | 35.0% | |
| ATCAAAGTTGACGAGTCTAT+AGG | - | chr5.4:36181871-36181890 | MS.gene98058:CDS | 35.0% | |
| ATCTGACAAGTGAAAAAGCA+GGG | + | chr5.4:36181252-36181271 | None:intergenic | 35.0% | |
| CAAGGTTAAGAGAAAGTTAG+CGG | - | chr5.4:36182485-36182504 | MS.gene98058:CDS | 35.0% | |
| CGAAACATATCCGTTAATCA+GGG | + | chr5.4:36182430-36182449 | None:intergenic | 35.0% | |
| CTCTTCAAACAGAGGTAAAA+AGG | + | chr5.4:36181362-36181381 | None:intergenic | 35.0% | |
| CTTGATGAGATGAATGCTTT+GGG | - | chr5.4:36181952-36181971 | MS.gene98058:CDS | 35.0% | |
| GAATGATAGAGATGATGTAG+AGG | - | chr5.4:36181729-36181748 | MS.gene98058:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | - | chr5.4:36182671-36182690 | MS.gene98058:CDS | 35.0% | |
| GACTATAATGACAGGTTTGA+TGG | - | chr5.4:36182212-36182231 | MS.gene98058:CDS | 35.0% | |
| GATCAAATTTGACCAGAATC+TGG | - | chr5.4:36182524-36182543 | MS.gene98058:CDS | 35.0% | |
| GATTATTGAAGCTCAGAAGT+TGG | - | chr5.4:36181837-36181856 | MS.gene98058:CDS | 35.0% | |
| TCTTGATGAGATGAATGCTT+TGG | - | chr5.4:36181951-36181970 | MS.gene98058:CDS | 35.0% | |
| TTGAAGTAGGTACTCATGAT+TGG | - | chr5.4:36182295-36182314 | MS.gene98058:CDS | 35.0% | |
| ! | AGTCGGTATTTTCTCTGTTT+AGG | - | chr5.4:36182145-36182164 | MS.gene98058:CDS | 35.0% |
| ! | CCTGATTAACGGATATGTTT+CGG | - | chr5.4:36182428-36182447 | MS.gene98058:CDS | 35.0% |
| ! | GACATTCTTTTTCCTTAACC+TGG | + | chr5.4:36182697-36182716 | None:intergenic | 35.0% |
| ! | GTCGGTATTTTCTCTGTTTA+GGG | - | chr5.4:36182146-36182165 | MS.gene98058:CDS | 35.0% |
| ! | TAGTAGTTCAGGTCTAAAGT+TGG | - | chr5.4:36182068-36182087 | MS.gene98058:CDS | 35.0% |
| ! | TGTTTCTATCAGAGCATCAT+AGG | + | chr5.4:36182103-36182122 | None:intergenic | 35.0% |
| !! | AAGCCTGATGTGTTTAGTTT+TGG | - | chr5.4:36181529-36181548 | MS.gene98058:CDS | 35.0% |
| !! | ATTGCTTTTAAGAATTGGGC+TGG | - | chr5.4:36182735-36182754 | MS.gene98058:CDS | 35.0% |
| AACTCTGTCAGCATCAGTTA+CGG | + | chr5.4:36181482-36181501 | None:intergenic | 40.0% | |
| AGGTTAAGAGAAAGTTAGCG+GGG | - | chr5.4:36182487-36182506 | MS.gene98058:CDS | 40.0% | |
| ATAAAAAGCTCAAAGTGGCC+AGG | - | chr5.4:36182676-36182695 | MS.gene98058:CDS | 40.0% | |
| ATGCAAGAAGGACTTTCAGA+AGG | - | chr5.4:36182361-36182380 | MS.gene98058:CDS | 40.0% | |
| ATTCCTGTATGCTATGGTCA+AGG | - | chr5.4:36182554-36182573 | MS.gene98058:CDS | 40.0% | |
| CCGAAACATATCCGTTAATC+AGG | + | chr5.4:36182431-36182450 | None:intergenic | 40.0% | |
| CTGATAGAAACATCCATGTC+CGG | - | chr5.4:36182111-36182130 | MS.gene98058:CDS | 40.0% | |
| GACAAGTAAGTCTGGTCATT+CGG | + | chr5.4:36182408-36182427 | None:intergenic | 40.0% | |
| GAGATGATGTAGAGGAAGTT+TGG | - | chr5.4:36181737-36181756 | MS.gene98058:CDS | 40.0% | |
| GATCTGACAAGTGAAAAAGC+AGG | + | chr5.4:36181253-36181272 | None:intergenic | 40.0% | |
| GGATTCAAGATGAAAACAGC+AGG | + | chr5.4:36181461-36181480 | None:intergenic | 40.0% | |
| GTTGACGAGTCTATAGGTTT+CGG | - | chr5.4:36181877-36181896 | MS.gene98058:CDS | 40.0% | |
| GTTGGAATTATGTCCAAGCT+CGG | - | chr5.4:36181502-36181521 | MS.gene98058:CDS | 40.0% | |
| TAATCAGGGACAAGTAAGTC+TGG | + | chr5.4:36182416-36182435 | None:intergenic | 40.0% | |
| TCTGACAAGTGAAAAAGCAG+GGG | + | chr5.4:36181251-36181270 | None:intergenic | 40.0% | |
| TCTGTTTGAAGAGAACTGCA+GGG | - | chr5.4:36181369-36181388 | MS.gene98058:CDS | 40.0% | |
| TGAGTACCTACTTCAATACG+AGG | + | chr5.4:36182291-36182310 | None:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | - | chr5.4:36182548-36182567 | MS.gene98058:CDS | 40.0% | |
| TGGTCAAATTTGATCCCCTT+CGG | + | chr5.4:36182519-36182538 | None:intergenic | 40.0% | |
| TTCCTGCTTTACAAAAAGCG+TGG | + | chr5.4:36182332-36182351 | None:intergenic | 40.0% | |
| TTCCTGTATGCTATGGTCAA+GGG | - | chr5.4:36182555-36182574 | MS.gene98058:CDS | 40.0% | |
| TTGCAGTAAGCCTTCAAGAT+CGG | + | chr5.4:36182006-36182025 | None:intergenic | 40.0% | |
| TTTCTTAGATGAGGTGGTTG+AGG | - | chr5.4:36182263-36182282 | MS.gene98058:CDS | 40.0% | |
| ! | ATTACTGGCTATGTTAAGGC+TGG | - | chr5.4:36181667-36181686 | MS.gene98058:CDS | 40.0% |
| ! | TGTGATGATGTTGTGGAACA+AGG | - | chr5.4:36182467-36182486 | MS.gene98058:CDS | 40.0% |
| !! | ACGCTTTTTGTAAAGCAGGA+AGG | - | chr5.4:36182331-36182350 | MS.gene98058:CDS | 40.0% |
| !! | ATCCACGCTTTTTGTAAAGC+AGG | - | chr5.4:36182327-36182346 | MS.gene98058:CDS | 40.0% |
| AACTGCAGACGCTACTCTAT+TGG | - | chr5.4:36182035-36182054 | MS.gene98058:CDS | 45.0% | |
| AAGAAAGCTGCCATCAACTC+AGG | + | chr5.4:36182249-36182268 | None:intergenic | 45.0% | |
| ACTGATGCTGACAGAGTTGT+TGG | - | chr5.4:36181484-36181503 | MS.gene98058:CDS | 45.0% | |
| AGACGCTACTCTATTGGTGA+CGG | - | chr5.4:36182041-36182060 | MS.gene98058:CDS | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | - | chr5.4:36182157-36182176 | MS.gene98058:CDS | 45.0% | |
| CTCTGTTTGAAGAGAACTGC+AGG | - | chr5.4:36181368-36181387 | MS.gene98058:CDS | 45.0% | |
| CTGACAAGTGAAAAAGCAGG+GGG | + | chr5.4:36181250-36181269 | None:intergenic | 45.0% | |
| CTGCAGTTCTCTTCAAACAG+AGG | + | chr5.4:36181370-36181389 | None:intergenic | 45.0% | |
| GAAGGCTAGAAGATGCAAGA+AGG | - | chr5.4:36182349-36182368 | MS.gene98058:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | - | chr5.4:36182647-36182666 | MS.gene98058:CDS | 45.0% | |
| GAGGATCCTCGTATTGAAGT+AGG | - | chr5.4:36182282-36182301 | MS.gene98058:CDS | 45.0% | |
| GATGGCAGCTTTCTTAGATG+AGG | - | chr5.4:36182254-36182273 | MS.gene98058:CDS | 45.0% | |
| GCATTGCAAGCAGAAACATC+AGG | + | chr5.4:36181427-36181446 | None:intergenic | 45.0% | |
| GGAATGCATCAACCAGATTC+TGG | + | chr5.4:36182539-36182558 | None:intergenic | 45.0% | |
| GGTTAAGAGAAAGTTAGCGG+GGG | - | chr5.4:36182488-36182507 | MS.gene98058:CDS | 45.0% | |
| TCTCTGTTTAGGGACATGAG+AGG | - | chr5.4:36182156-36182175 | MS.gene98058:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | - | chr5.4:36182158-36182177 | MS.gene98058:CDS | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | - | chr5.4:36182587-36182606 | MS.gene98058:CDS | 45.0% | |
| ! | ATCCCTTTTCATTTGTGGGG+CGG | - | chr5.4:36181295-36181314 | MS.gene98058:CDS | 45.0% |
| ! | GATGAGATGAATGCTTTGGG+AGG | - | chr5.4:36181955-36181974 | MS.gene98058:CDS | 45.0% |
| ! | GGTTGCTTTGGATGACAAAC+TGG | - | chr5.4:36181390-36181409 | MS.gene98058:CDS | 45.0% |
| ! | GTGACGGAGATTAGTAGTTC+AGG | - | chr5.4:36182057-36182076 | MS.gene98058:CDS | 45.0% |
| ! | TACCGACTGAAAGTCTTGAC+CGG | + | chr5.4:36182133-36182152 | None:intergenic | 45.0% |
| ! | TTCAGGTCTAAAGTTGGACG+TGG | - | chr5.4:36182074-36182093 | MS.gene98058:CDS | 45.0% |
| AAGAGAAAGTTAGCGGGGGA+TGG | - | chr5.4:36182492-36182511 | MS.gene98058:CDS | 50.0% | |
| ACACCGCCCCACAAATGAAA+AGG | + | chr5.4:36181301-36181320 | None:intergenic | 50.0% | |
| AGAGAAAGTTAGCGGGGGAT+GGG | - | chr5.4:36182493-36182512 | MS.gene98058:CDS | 50.0% | |
| AGAGAACTGCAGGGTTGCTT+TGG | - | chr5.4:36181378-36181397 | MS.gene98058:CDS | 50.0% | |
| AGCTCAAAGTGGCCAGGTTA+AGG | - | chr5.4:36182682-36182701 | MS.gene98058:CDS | 50.0% | |
| ATCAGGCTTAACACCGAGCT+TGG | + | chr5.4:36181518-36181537 | None:intergenic | 50.0% | |
| CACCGCCCCACAAATGAAAA+GGG | + | chr5.4:36181300-36181319 | None:intergenic | 50.0% | |
| CTCCCTTGACCATAGCATAC+AGG | + | chr5.4:36182560-36182579 | None:intergenic | 50.0% | |
| CTGAAAGTCTTGACCGGACA+TGG | + | chr5.4:36182127-36182146 | None:intergenic | 50.0% | |
| CTGTATGCTATGGTCAAGGG+AGG | - | chr5.4:36182558-36182577 | MS.gene98058:CDS | 50.0% | |
| GGCAGCTTTCTTAGATGAGG+TGG | - | chr5.4:36182257-36182276 | MS.gene98058:CDS | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | - | chr5.4:36182128-36182147 | MS.gene98058:CDS | 50.0% | |
| ! | GAACCATCGACCTGAGTTGA+TGG | - | chr5.4:36182236-36182255 | MS.gene98058:CDS | 50.0% |
| ! | GGTCTATGTGCCGATCTTGA+AGG | - | chr5.4:36181993-36182012 | MS.gene98058:CDS | 50.0% |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | - | chr5.4:36181964-36181983 | MS.gene98058:CDS | 50.0% |
| CTGCCATCAACTCAGGTCGA+TGG | + | chr5.4:36182242-36182261 | None:intergenic | 55.0% | |
| ! | AAAAGCAGGGGGTGCAGTGT+TGG | + | chr5.4:36181239-36181258 | None:intergenic | 55.0% |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | - | chr5.4:36181963-36181982 | MS.gene98058:CDS | 55.0% |
| TAGGGACATGAGAGGGGCGA+GGG | - | chr5.4:36182164-36182183 | MS.gene98058:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | - | chr5.4:36181971-36181990 | MS.gene98058:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | - | chr5.4:36182163-36182182 | MS.gene98058:CDS | 60.0% | |
| TTGGGAGGCTCTGTGGGTCT+TGG | - | chr5.4:36181970-36181989 | MS.gene98058:CDS | 60.0% | |
| ! | GGTCATTCGGCTCGAAGTGC+AGG | + | chr5.4:36182395-36182414 | None:intergenic | 60.0% |
| GGGAGGCTCTGTGGGTCTTG+GGG | - | chr5.4:36181972-36181991 | MS.gene98058:CDS | 65.0% | |
| TTAGCGGGGGATGGGCCGAA+GGG | - | chr5.4:36182501-36182520 | MS.gene98058:CDS | 65.0% | |
| ! | AGCAGGGGGTGCAGTGTTGG+CGG | + | chr5.4:36181236-36181255 | None:intergenic | 65.0% |
| GTTAGCGGGGGATGGGCCGA+AGG | - | chr5.4:36182500-36182519 | MS.gene98058:CDS | 70.0% | |
| TAGCGGGGGATGGGCCGAAG+GGG | - | chr5.4:36182502-36182521 | MS.gene98058:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 36181226 | 36182770 | 36181226 | ID=MS.gene98058 |
| chr5.4 | mRNA | 36181226 | 36182770 | 36181226 | ID=MS.gene98058.t1;Parent=MS.gene98058 |
| chr5.4 | exon | 36181226 | 36182770 | 36181226 | ID=MS.gene98058.t1.exon1;Parent=MS.gene98058.t1 |
| chr5.4 | CDS | 36181226 | 36182770 | 36181226 | ID=cds.MS.gene98058.t1;Parent=MS.gene98058.t1 |
| Gene Sequence |
| Protein sequence |
