AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98200.t1 MTR_8g028435 91.111 180 16 0 1 180 1 180 9.02e-121 349
MS.gene98200.t1 MTR_8g028435 96.154 52 2 0 210 261 313 364 1.71e-26 106
MS.gene98200.t1 MTR_8g009160 79.459 185 38 0 1 185 1 185 9.54e-107 313
MS.gene98200.t1 MTR_8g009160 86.000 50 7 0 212 261 315 364 7.59e-22 93.6
MS.gene98200.t1 MTR_8g009090 78.378 185 40 0 1 185 1 185 1.43e-106 313
MS.gene98200.t1 MTR_8g009090 82.692 52 9 0 210 261 313 364 3.85e-21 91.7
MS.gene98200.t1 MTR_8g008930 82.286 175 30 1 1 174 1 175 2.57e-106 312
MS.gene98200.t1 MTR_8g008930 82.692 52 9 0 210 261 314 365 2.21e-20 89.4
MS.gene98200.t1 MTR_8g009110 80.110 181 35 1 1 180 1 181 1.43e-104 308
MS.gene98200.t1 MTR_8g009110 90.385 52 5 0 210 261 314 365 2.32e-23 97.8
MS.gene98200.t1 MTR_8g009150 77.901 181 39 1 1 180 1 181 5.42e-100 295
MS.gene98200.t1 MTR_8g009150 84.615 52 8 0 210 261 294 345 4.74e-22 94.0
MS.gene98200.t1 MTR_8g009170 78.453 181 38 1 1 180 1 181 2.19e-99 292
MS.gene98200.t1 MTR_8g009170 78.453 181 38 1 1 180 1 181 5.71e-99 294
MS.gene98200.t1 MTR_8g009170 79.245 53 10 1 210 261 314 366 2.23e-19 86.7
MS.gene98200.t1 MTR_8g009120 81.034 174 32 1 1 173 1 174 7.36e-99 293
MS.gene98200.t1 MTR_8g009120 86.538 52 7 0 210 261 302 353 3.85e-22 94.4
MS.gene98200.t1 MTR_4g117880 74.033 181 46 1 1 180 1 181 3.67e-96 286
MS.gene98200.t1 MTR_4g117880 67.273 55 17 1 208 261 312 366 5.11e-15 74.3
MS.gene98200.t1 MTR_2g069090 68.639 169 49 2 15 180 20 187 5.72e-79 243
MS.gene98200.t1 MTR_2g069090 69.231 52 16 0 210 261 321 372 3.90e-16 77.4
MS.gene98200.t1 MTR_2g069210 65.169 178 57 3 1 174 1 177 2.95e-78 241
MS.gene98200.t1 MTR_2g069210 73.077 52 14 0 210 261 316 367 1.75e-18 84.0
MS.gene98200.t1 MTR_2g069190 65.680 169 54 2 15 180 20 187 4.76e-77 238
MS.gene98200.t1 MTR_2g069190 76.923 52 12 0 210 261 320 371 1.45e-18 84.3
MS.gene98200.t1 MTR_2g069300 65.644 163 52 2 15 174 6 167 9.02e-75 232
MS.gene98200.t1 MTR_2g069300 63.265 49 18 0 213 261 310 358 2.25e-14 72.4
MS.gene98200.t1 MTR_8g009080 54.348 184 78 4 16 196 47 227 4.24e-65 206
MS.gene98200.t1 MTR_8g009080 54.348 184 78 4 16 196 47 227 1.06e-64 205
MS.gene98200.t1 MTR_8g009080 54.348 184 78 4 16 196 47 227 2.63e-64 206
MS.gene98200.t1 MTR_8g009080 72.000 50 14 0 212 261 348 397 6.42e-16 77.0
MS.gene98200.t1 MTR_1g043770 54.762 168 73 3 19 185 11 176 5.77e-62 199
MS.gene98200.t1 MTR_1g043770 58.333 48 20 0 214 261 308 355 2.84e-12 66.2
MS.gene98200.t1 MTR_1g043770 54.762 168 73 3 19 185 11 176 8.91e-62 196
MS.gene98200.t1 MTR_1g043760 51.163 172 80 3 15 184 7 176 2.76e-59 192
MS.gene98200.t1 MTR_1g043775 52.299 174 78 4 15 185 7 178 2.68e-58 188
MS.gene98200.t1 MTR_1g043775 52.299 174 78 4 15 185 7 178 4.73e-58 189
MS.gene98200.t1 MTR_1g044105 52.096 167 70 4 15 173 7 171 1.49e-57 182
MS.gene98200.t1 MTR_1g043810 50.000 174 82 4 15 185 7 178 8.93e-56 182
MS.gene98200.t1 MTR_1g043810 50.000 174 82 4 15 185 7 178 1.77e-55 182
MS.gene98200.t1 MTR_8g041600 49.390 164 75 3 17 174 22 183 8.86e-50 166
MS.gene98200.t1 MTR_1g093140 45.946 185 84 4 15 186 17 198 1.35e-49 167
MS.gene98200.t1 MTR_1g093140 56.250 48 21 0 214 261 331 378 9.24e-11 61.6
MS.gene98200.t1 MTR_8g041620 49.390 164 75 3 17 174 22 183 3.77e-49 166
MS.gene98200.t1 MTR_8g041620 58.333 48 20 0 214 261 327 374 1.51e-11 63.9
MS.gene98200.t1 MTR_8g041600 47.647 170 81 3 17 180 22 189 5.18e-49 166
MS.gene98200.t1 MTR_8g041600 60.417 48 19 0 214 261 327 374 1.10e-12 67.4
MS.gene98200.t1 MTR_1g093120 44.068 177 90 4 17 186 18 192 8.31e-49 165
MS.gene98200.t1 MTR_7g078010 42.391 184 94 4 17 196 22 197 1.16e-46 157
MS.gene98200.t1 MTR_8g006930 42.021 188 97 4 17 200 22 201 1.72e-46 159
MS.gene98200.t1 MTR_8g006930 58.000 50 21 0 212 261 324 373 4.78e-13 68.6
MS.gene98200.t1 MTR_7g078010 42.021 188 97 4 17 200 22 201 7.04e-46 157
MS.gene98200.t1 MTR_7g056347 42.703 185 94 4 16 196 21 197 7.91e-46 157
MS.gene98200.t1 MTR_7g056347 58.000 50 21 0 212 261 324 373 8.06e-14 70.9
MS.gene98200.t1 MTR_1g093110 43.820 178 87 4 17 184 19 193 2.62e-45 156
MS.gene98200.t1 MTR_1g093110 56.000 50 22 0 212 261 325 374 4.07e-12 65.9
MS.gene98200.t1 MTR_4g119410 43.452 168 88 3 17 180 22 186 4.05e-45 155
MS.gene98200.t1 MTR_4g119410 60.000 50 20 0 212 261 324 373 1.48e-13 70.1
MS.gene98200.t1 MTR_8g063070 41.477 176 92 3 17 186 22 192 4.03e-44 153
MS.gene98200.t1 MTR_8g063070 53.571 56 26 0 206 261 318 373 1.36e-11 64.3
MS.gene98200.t1 MTR_4g099380 43.558 163 76 3 19 174 129 282 4.22e-43 148
MS.gene98200.t1 MTR_8g062600 39.459 185 98 4 16 193 21 198 1.68e-42 149
MS.gene98200.t1 MTR_8g062600 54.000 50 23 0 212 261 324 373 2.63e-12 66.2
MS.gene98200.t1 MTR_2g069010 37.755 196 116 3 16 207 21 214 3.33e-42 148
MS.gene98200.t1 MTR_2g069020 41.714 175 97 3 16 186 19 192 4.18e-42 147
MS.gene98200.t1 MTR_4g024660 41.566 166 94 3 17 180 22 186 8.74e-42 147
MS.gene98200.t1 MTR_4g024660 56.000 50 22 0 212 261 324 373 6.01e-12 65.1
MS.gene98200.t1 MTR_2g069020 41.714 175 97 3 16 186 19 192 9.04e-42 147
MS.gene98200.t1 MTR_2g068950 39.175 194 112 4 1 190 1 192 5.49e-41 145
MS.gene98200.t1 MTR_2g068960 39.691 194 111 4 1 190 1 192 3.09e-40 142
MS.gene98200.t1 MTR_0032s0040 44.186 172 80 3 15 174 15 182 9.98e-40 141
MS.gene98200.t1 MTR_0032s0040 56.250 48 21 0 214 261 326 373 1.96e-12 66.6
MS.gene98200.t1 MTR_7g029655 36.937 222 121 5 15 223 15 230 1.18e-39 141
MS.gene98200.t1 MTR_7g029655 58.333 48 20 0 214 261 323 370 1.85e-13 69.7
MS.gene98200.t1 MTR_7g056393 40.476 168 93 3 17 180 22 186 5.37e-39 139
MS.gene98200.t1 MTR_7g056393 63.265 49 18 0 213 261 325 373 4.52e-14 71.6
MS.gene98200.t1 MTR_2g069060 39.665 179 91 2 16 194 21 182 8.59e-38 136
MS.gene98200.t1 MTR_2g069060 61.702 47 17 1 215 261 304 349 1.78e-11 63.9
MS.gene98200.t1 MTR_7g105070 37.576 165 98 2 19 180 15 177 1.10e-35 130
MS.gene98200.t1 MTR_7g056370 37.427 171 100 3 18 184 2 169 1.68e-35 126
MS.gene98200.t1 MTR_2g069070 39.264 163 82 2 16 178 21 166 2.29e-35 125
MS.gene98200.t1 MTR_1g070185 38.728 173 100 2 16 185 22 191 1.22e-34 128
MS.gene98200.t1 MTR_2g069060 42.857 140 79 1 55 194 22 160 2.37e-34 124
MS.gene98200.t1 MTR_8g469400 41.026 156 77 4 17 170 22 164 1.78e-32 122
MS.gene98200.t1 MTR_8g469400 56.000 50 22 0 212 261 311 360 2.38e-12 66.2
MS.gene98200.t1 MTR_1g032220 35.088 171 103 2 19 185 28 194 3.27e-29 113
MS.gene98200.t1 MTR_1g032250 34.503 171 104 2 19 185 28 194 1.42e-28 112
MS.gene98200.t1 MTR_1g032140 36.196 163 96 2 19 177 21 179 1.85e-28 111
MS.gene98200.t1 MTR_1g043840 60.811 74 28 1 71 144 256 328 7.36e-26 103
MS.gene98200.t1 MTR_7g056353 33.962 159 76 4 17 174 24 154 5.95e-21 92.0
MS.gene98200.t1 MTR_8g009180 78.846 52 11 0 210 261 243 294 3.61e-19 85.1
MS.gene98200.t1 MTR_8g009180 85.000 40 6 0 131 170 45 84 5.99e-18 81.6
MS.gene98200.t1 MTR_7g068650 30.573 157 101 3 14 163 1 156 5.81e-19 85.5
MS.gene98200.t1 MTR_8g008960 75.000 48 12 0 214 261 55 102 6.14e-18 77.4
MS.gene98200.t1 MTR_2g068800 30.968 155 85 3 27 180 21 154 6.04e-17 79.0
MS.gene98200.t1 MTR_2g068850 35.385 130 77 4 27 153 21 146 3.72e-16 75.5
MS.gene98200.t1 MTR_2g068840 28.500 200 133 5 27 220 21 216 2.17e-15 75.1
MS.gene98200.t1 MTR_3g091350 29.825 171 103 4 4 170 13 170 5.28e-15 74.3
MS.gene98200.t1 MTR_5g065010 29.801 151 95 4 27 170 3 149 8.25e-15 73.6
MS.gene98200.t1 MTR_4g015790 29.940 167 106 5 43 203 48 209 5.00e-14 71.2
MS.gene98200.t1 MTR_3g070860 25.238 210 143 5 14 210 1 209 7.17e-14 70.9
MS.gene98200.t1 MTR_3g045230 28.994 169 106 3 27 188 17 178 9.77e-14 70.5
MS.gene98200.t1 MTR_1g062110 32.500 160 91 6 27 174 26 180 1.16e-13 70.5
MS.gene98200.t1 MTR_1g062110 32.500 160 91 6 27 174 26 180 2.06e-13 69.3
MS.gene98200.t1 MTR_3g092890 32.353 102 63 1 60 161 38 133 1.19e-12 67.0
MS.gene98200.t1 MTR_0009s0050 35.780 109 63 3 55 161 40 143 1.83e-12 66.6
MS.gene98200.t1 MTR_0009s0050 35.780 109 63 3 55 161 40 143 1.92e-12 66.6
MS.gene98200.t1 MTR_8g024120 28.671 143 91 4 26 161 2 140 3.06e-12 65.9
MS.gene98200.t1 MTR_3g043900 28.824 170 104 5 27 188 17 177 3.10e-12 65.9
MS.gene98200.t1 MTR_0009s0410 28.846 156 98 6 28 176 12 161 3.37e-12 63.5
MS.gene98200.t1 MTR_5g055800 31.298 131 81 5 28 155 13 137 4.34e-12 65.5
MS.gene98200.t1 MTR_5g055690 26.316 152 96 3 27 166 12 159 5.01e-12 64.7
MS.gene98200.t1 MTR_5g055690 26.316 152 96 3 27 166 12 159 5.40e-12 65.5
MS.gene98200.t1 MTR_1g032230 29.333 150 78 3 3 148 7 132 6.84e-12 64.3
MS.gene98200.t1 MTR_5g048570 28.477 151 91 4 27 166 12 156 7.01e-12 65.1
MS.gene98200.t1 MTR_7g081710 26.866 134 93 2 31 161 17 148 7.19e-12 65.1
MS.gene98200.t1 MTR_7g102720 26.866 134 92 1 55 188 32 159 1.38e-11 63.9
MS.gene98200.t1 MTR_5g082750 30.252 119 78 2 60 174 49 166 1.87e-11 63.9
MS.gene98200.t1 MTR_7g062570 28.058 139 88 4 28 161 20 151 2.57e-11 63.2
MS.gene98200.t1 MTR_5g032870 35.165 91 56 2 44 134 24 111 3.31e-11 62.8
MS.gene98200.t1 MTR_4g099390 52.083 48 23 0 214 261 37 84 3.79e-11 58.5
MS.gene98200.t1 MTR_1g034140 33.019 106 61 4 60 165 27 122 3.87e-11 62.8
MS.gene98200.t1 MTR_5g032880 36.782 87 52 2 44 130 362 445 3.93e-11 63.2
MS.gene98200.t1 MTR_5g048850 31.613 155 94 7 27 176 12 159 4.11e-11 62.4
MS.gene98200.t1 MTR_1g033810 27.465 142 95 4 60 200 47 181 4.18e-11 62.8
MS.gene98200.t1 MTR_3g091360 29.412 136 92 3 39 170 28 163 4.93e-11 62.4
MS.gene98200.t1 MTR_5g048850 31.818 154 93 7 28 176 13 159 5.42e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98200.t1 AT5G59540 52.542 177 77 4 17 187 14 189 3.69e-59 189
MS.gene98200.t1 AT5G59540 52.542 177 77 4 17 187 14 189 1.35e-58 190
MS.gene98200.t1 AT5G59540 54.000 50 23 0 212 261 317 366 5.31e-11 62.4
MS.gene98200.t1 AT1G06640 51.136 176 80 2 16 185 14 189 2.07e-58 187
MS.gene98200.t1 AT1G06640 50.273 183 84 3 9 185 8 189 2.44e-58 188
MS.gene98200.t1 AT1G06640 50.273 183 84 3 9 185 8 189 9.82e-58 188
MS.gene98200.t1 AT1G06640 62.000 50 19 0 212 261 320 369 6.31e-14 71.2
MS.gene98200.t1 AT1G06650 49.432 176 83 2 16 185 14 189 7.33e-57 184
MS.gene98200.t1 AT1G06650 49.432 176 83 2 16 185 14 189 3.56e-56 184
MS.gene98200.t1 AT1G06650 69.231 52 16 0 210 261 318 369 8.89e-18 82.0
MS.gene98200.t1 AT1G06620 44.390 205 101 4 19 211 18 221 9.21e-56 181
MS.gene98200.t1 AT1G06620 44.390 205 101 4 19 211 18 221 1.31e-54 180
MS.gene98200.t1 AT1G06620 53.061 49 23 0 213 261 317 365 8.29e-12 64.7
MS.gene98200.t1 AT1G04350 48.824 170 78 3 16 180 10 175 2.73e-53 176
MS.gene98200.t1 AT5G59530 50.847 177 77 6 17 186 13 186 1.48e-50 169
MS.gene98200.t1 AT5G59530 56.000 50 22 0 212 261 315 364 3.31e-11 63.2
MS.gene98200.t1 AT5G43440 48.045 179 82 4 15 185 11 186 1.52e-50 167
MS.gene98200.t1 AT2G30830 46.988 166 87 1 16 180 9 174 6.57e-50 167
MS.gene98200.t1 AT2G30830 54.167 48 22 0 214 261 311 358 8.51e-11 62.0
MS.gene98200.t1 AT2G30840 40.455 220 116 4 16 223 9 225 8.26e-50 166
MS.gene98200.t1 AT5G43440 48.045 179 82 4 15 185 11 186 1.18e-49 167
MS.gene98200.t1 AT2G30840 45.143 175 91 2 16 185 9 183 1.64e-49 167
MS.gene98200.t1 AT2G30840 45.143 175 91 2 16 185 9 183 1.71e-49 167
MS.gene98200.t1 AT1G06645 51.875 160 70 3 9 162 21 179 2.12e-49 167
MS.gene98200.t1 AT1G06645 70.000 50 15 0 212 261 330 379 7.78e-17 79.7
MS.gene98200.t1 AT5G43450 43.017 179 88 3 15 185 11 183 1.31e-48 162
MS.gene98200.t1 AT5G43450 43.017 179 88 3 15 185 11 183 5.41e-48 163
MS.gene98200.t1 AT1G03410 48.171 164 78 3 16 173 8 170 1.19e-47 162
MS.gene98200.t1 AT1G03410 48.171 164 78 3 16 173 45 207 1.91e-47 162
MS.gene98200.t1 AT2G25450 44.809 183 96 3 16 196 9 188 2.99e-47 161
MS.gene98200.t1 AT3G61400 42.222 180 93 3 15 185 12 189 7.21e-46 155
MS.gene98200.t1 AT3G61400 42.222 180 93 3 15 185 12 189 2.68e-45 156
MS.gene98200.t1 AT1G04380 41.860 172 82 3 16 186 13 167 2.01e-44 151
MS.gene98200.t1 AT1G04380 41.860 172 82 3 16 186 13 167 1.18e-43 151
MS.gene98200.t1 AT1G04380 58.333 48 20 0 214 261 298 345 4.43e-11 62.8
MS.gene98200.t1 AT1G03400 42.373 177 85 4 16 186 8 173 2.07e-40 143
MS.gene98200.t1 AT1G03400 45.732 164 72 4 16 173 8 160 6.47e-40 142
MS.gene98200.t1 AT3G12900 28.643 199 135 4 27 220 21 217 8.53e-20 87.8
MS.gene98200.t1 AT1G55290 26.829 205 133 7 27 221 25 222 9.25e-19 84.7
MS.gene98200.t1 AT3G13610 26.961 204 133 6 27 221 26 222 1.06e-18 84.7
MS.gene98200.t1 AT2G36690 30.345 145 90 3 25 161 18 159 1.80e-13 69.7
MS.gene98200.t1 AT2G36690 30.345 145 90 3 25 161 18 159 1.80e-13 69.7
MS.gene98200.t1 AT3G55970 27.607 163 110 4 59 215 51 211 5.37e-13 67.8
MS.gene98200.t1 AT3G55970 27.607 163 110 4 59 215 51 211 1.04e-12 67.4
MS.gene98200.t1 AT4G10500 29.412 102 69 1 60 161 44 142 1.42e-11 63.9
MS.gene98200.t1 AT2G38240 28.025 157 100 5 20 170 4 153 2.28e-11 63.5
MS.gene98200.t1 AT2G44800 27.586 145 99 3 21 161 9 151 2.63e-11 63.5
MS.gene98200.t1 AT4G10490 27.097 155 106 4 60 210 42 193 3.45e-11 63.2
MS.gene98200.t1 AT3G19010 31.092 119 72 3 55 168 23 136 5.22e-11 62.0
MS.gene98200.t1 AT3G19010 31.092 119 72 3 55 168 23 136 7.18e-11 62.0
MS.gene98200.t1 AT3G19010 31.092 119 72 3 55 168 23 136 7.18e-11 62.0
MS.gene98200.t1 AT3G19010 31.092 119 72 3 55 168 23 136 7.53e-11 62.0

Find 51 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTGTGGTTTCTCTGTATA+TGG 0.213587 8.2:+68452296 None:intergenic
ATAGCTCACCGGCACTTAAT+TGG 0.253060 8.2:-68454811 MS.gene98200:CDS
TCTGATAAGAGTTCCTTTAT+AGG 0.254152 8.2:+68452330 None:intergenic
GAAACAAAAGCTGGTGTAAA+AGG 0.285364 8.2:-68455175 MS.gene98200:CDS
TCTTCTGGTTTGGGAGTATC+AGG 0.299088 8.2:+68454761 None:intergenic
ATCAGGTTGATGATGAAATA+AGG 0.315404 8.2:+68455120 None:intergenic
TATAGGAATGTCTTCTGGTT+TGG 0.318755 8.2:+68454751 None:intergenic
ATAGGAATGTCTTCTGGTTT+GGG 0.327915 8.2:+68454752 None:intergenic
TAGGCTAACTCATATTTATC+AGG 0.330157 8.2:+68455103 None:intergenic
AAAATTGCTATTATAAATAA+AGG 0.338787 8.2:+68454841 None:intergenic
AATAACATGGCTTGTGTTGT+AGG 0.361872 8.2:+68455084 None:intergenic
CATACTATAGGAATGTCTTC+TGG 0.366364 8.2:+68454746 None:intergenic
GATAGGACTAATGTCTATAT+TGG 0.375640 8.2:-68452621 MS.gene98200:intron
AAAGCTCTATGGACCTATAA+AGG 0.376551 8.2:-68452343 MS.gene98200:CDS
AGGTCATCCTCAAAGCTCTA+TGG 0.378756 8.2:-68452354 MS.gene98200:CDS
GTTAGGCTTGTTTGTATAAG+TGG 0.383659 8.2:+68455234 None:intergenic
CATTAGTCCTATCTGTTTGA+AGG 0.398300 8.2:+68452631 None:intergenic
AAGATTTGTATACTAGAGAT+AGG 0.424171 8.2:-68454871 MS.gene98200:CDS
TTTGAAGCAAAAGGACTAGA+TGG 0.445481 8.2:-68452255 MS.gene98200:CDS
GTAGCATACTTTGAAGCAAA+AGG 0.455153 8.2:-68452264 MS.gene98200:CDS
GTTCTTGAGGATTTGAAAGA+TGG 0.455408 8.2:-68454932 MS.gene98200:CDS
TCCATATACCTGCATACTAT+AGG 0.464505 8.2:+68454734 None:intergenic
TATAGGTCCATAGAGCTTTG+AGG 0.468817 8.2:+68452347 None:intergenic
GTTCATTCAATATAGAATCA+AGG 0.486469 8.2:+68455212 None:intergenic
TTCAATATAGAATCAAGGTT+AGG 0.490953 8.2:+68455217 None:intergenic
ATTTGAAAGATGGTGTTATG+AGG 0.491070 8.2:-68454922 MS.gene98200:CDS
GGTTGATGATGAAATAAGGT+AGG 0.509585 8.2:+68455124 None:intergenic
ACTTGATCCTTCAAACAGAT+AGG 0.517401 8.2:-68452638 MS.gene98200:CDS
GGTGTAAAAGGACTTGTTGA+TGG 0.518526 8.2:-68455163 MS.gene98200:CDS
TGAAAGAAGCATGTGAAACA+TGG 0.525472 8.2:-68454994 MS.gene98200:CDS
AATCCCTTTGAGTGTTCTTG+AGG 0.532394 8.2:-68454945 MS.gene98200:CDS
AAATCCTCAAGAACACTCAA+AGG 0.548795 8.2:+68454941 None:intergenic
AATCCTCAAGAACACTCAAA+GGG 0.552395 8.2:+68454942 None:intergenic
ACTGTGGTTTCTCTGTATAT+GGG 0.553741 8.2:+68452297 None:intergenic
GCTCACCGGCACTTAATTGG+AGG 0.561497 8.2:-68454808 MS.gene98200:CDS
AAGACATTCCTATAGTATGC+AGG 0.562330 8.2:-68454742 MS.gene98200:intron
GAAAGAAGCATGTGAAACAT+GGG 0.574517 8.2:-68454993 MS.gene98200:CDS
ATATCTGCAAGGTCTATGAC+AGG 0.576610 8.2:+68455061 None:intergenic
GTTGATGATGAAATAAGGTA+GGG 0.578534 8.2:+68455125 None:intergenic
GCATTTGATGAAACAAAAGC+TGG 0.578863 8.2:-68455184 MS.gene98200:CDS
AGAGCTTTGAGGATGACCTA+TGG 0.589844 8.2:+68452358 None:intergenic
TGCAATGTAAGCAACAACAG+AGG 0.594304 8.2:+68452683 None:intergenic
CTTTGTTATCAATATCTGCA+AGG 0.600509 8.2:+68455050 None:intergenic
GTATCCCTCCAATTAAGTGC+CGG 0.602065 8.2:+68454803 None:intergenic
GTGGTTTCTCTGTATATGGG+AGG 0.613663 8.2:+68452300 None:intergenic
GCAATGTAAGCAACAACAGA+GGG 0.621798 8.2:+68452684 None:intergenic
CTCACCGGCACTTAATTGGA+GGG 0.631614 8.2:-68454807 MS.gene98200:CDS
TGCTACATAGTCAGCAACTG+TGG 0.641708 8.2:+68452281 None:intergenic
AAAGAAGCATGTGAAACATG+GGG 0.680890 8.2:-68454992 MS.gene98200:CDS
GGTCTATGACAGGAATAACA+TGG 0.684175 8.2:+68455071 None:intergenic
GTAAAAGGACTTGTTGATGG+AGG 0.724997 8.2:-68455160 MS.gene98200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAGAAAAAAATTG+AGG + chr8.2:68453304-68453323 None:intergenic 10.0%
!! TTAATAATACATCTTAATAA+AGG - chr8.2:68453905-68453924 MS.gene98200:intron 10.0%
!!! AAAATTGCTATTATAAATAA+AGG + chr8.2:68452627-68452646 None:intergenic 10.0%
!!! TCGTTAATTAATTTAAAATA+AGG + chr8.2:68453173-68453192 None:intergenic 10.0%
!! AATACATTACTAAAAGTTTA+TGG + chr8.2:68453698-68453717 None:intergenic 15.0%
!! AGAAAAATAAAATATGTTGA+AGG + chr8.2:68454182-68454201 None:intergenic 15.0%
!! ATAATCAACAAAAATCAATA+TGG - chr8.2:68454544-68454563 MS.gene98200:intron 15.0%
!! GTATTATGAAAATGATATAT+TGG + chr8.2:68453740-68453759 None:intergenic 15.0%
!! TAGATTAATAATCAATTATG+TGG + chr8.2:68454522-68454541 None:intergenic 15.0%
!!! TTGTTAAATGTTGTTTTTAT+CGG - chr8.2:68453130-68453149 MS.gene98200:intron 15.0%
!! AAACAAACAAGTATTACATT+AGG + chr8.2:68454919-68454938 None:intergenic 20.0%
!! TAATACATCTTAATAAAGGT+TGG - chr8.2:68453909-68453928 MS.gene98200:intron 20.0%
!! TTTATGTACTATTTCAACTA+TGG - chr8.2:68452765-68452784 MS.gene98200:intron 20.0%
!!! AATTTCTAGTTAACATGAAA+AGG + chr8.2:68453210-68453229 None:intergenic 20.0%
!!! CATATTTTATTTTTCTCAAG+TGG - chr8.2:68454186-68454205 MS.gene98200:intron 20.0%
!!! CGACTTATTTTAATTTTCTA+AGG - chr8.2:68454334-68454353 MS.gene98200:intron 20.0%
!!! TATATTAGAGTATATTTTGC+TGG - chr8.2:68454424-68454443 MS.gene98200:intron 20.0%
!!! TGATTTTGATTACACATATT+AGG + chr8.2:68454647-68454666 None:intergenic 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG - chr8.2:68452497-68452516 MS.gene98200:intron 20.0%
! AAGATTTGTATACTAGAGAT+AGG - chr8.2:68452594-68452613 MS.gene98200:intron 25.0%
! AGAGATATATTGCTAGAATA+TGG - chr8.2:68453340-68453359 MS.gene98200:intron 25.0%
! ATATCTCTGCAAAAATAAGT+AGG + chr8.2:68453328-68453347 None:intergenic 25.0%
! ATGAATAAAACCATATTGAG+AGG - chr8.2:68453993-68454012 MS.gene98200:intron 25.0%
! ATTTACGCAATCAATTGTTA+AGG + chr8.2:68454499-68454518 None:intergenic 25.0%
! CCCTCAAAAAAAATTCTATA+GGG - chr8.2:68454142-68454161 MS.gene98200:intron 25.0%
! CTTAAATAAGATGAGAGATA+AGG + chr8.2:68454739-68454758 None:intergenic 25.0%
! GAAAATACATGAGAAATCTA+GGG - chr8.2:68453362-68453381 MS.gene98200:intron 25.0%
! GATATAATTGAATGTAACCA+CGG + chr8.2:68452874-68452893 None:intergenic 25.0%
! GTTCATTCAATATAGAATCA+AGG + chr8.2:68452256-68452275 None:intergenic 25.0%
! TAACTGACAGAAATTCTAAA+AGG - chr8.2:68453260-68453279 MS.gene98200:intron 25.0%
! TAGAATGACTCAATTTATCA+TGG - chr8.2:68453807-68453826 MS.gene98200:intron 25.0%
! TGTCTATATTGGTAAGAAAT+AGG - chr8.2:68454855-68454874 MS.gene98200:CDS 25.0%
! TTCAATATAGAATCAAGGTT+AGG + chr8.2:68452251-68452270 None:intergenic 25.0%
!! CTTATCTCTCATCTTATTTA+AGG - chr8.2:68454737-68454756 MS.gene98200:intron 25.0%
!! GGATACTTTTATATGTTACT+TGG - chr8.2:68452679-68452698 MS.gene98200:CDS 25.0%
!! GTTTTTAAATGATAGCATGA+CGG - chr8.2:68454232-68454251 MS.gene98200:intron 25.0%
!! TTTTGATATTTATAGCTCAC+CGG - chr8.2:68452643-68452662 MS.gene98200:CDS 25.0%
!!! ACAATTTTTTGGTGAATACT+TGG + chr8.2:68452443-68452462 None:intergenic 25.0%
!!! ATTGATGATTTCAAGTTAGT+TGG - chr8.2:68454302-68454321 MS.gene98200:intron 25.0%
!!! CCCTATAGAATTTTTTTTGA+GGG + chr8.2:68454145-68454164 None:intergenic 25.0%
!!! CCTATAGAATTTTTTTTGAG+GGG + chr8.2:68454144-68454163 None:intergenic 25.0%
!!! TCACTTTGTCAACAATTTTT+TGG + chr8.2:68452454-68452473 None:intergenic 25.0%
!!! TCCCTATAGAATTTTTTTTG+AGG + chr8.2:68454146-68454165 None:intergenic 25.0%
AAACATGCAACAGATATTCT+TGG + chr8.2:68455075-68455094 None:intergenic 30.0%
AAGTCCTTTATCAGGATAAA+TGG - chr8.2:68453584-68453603 MS.gene98200:intron 30.0%
ACGATACTAATATTGATACG+TGG + chr8.2:68452917-68452936 None:intergenic 30.0%
ATCAATATTAGTATCGTCTC+TGG - chr8.2:68452920-68452939 MS.gene98200:intron 30.0%
ATTTATCCTGATAAAGGACT+TGG + chr8.2:68453585-68453604 None:intergenic 30.0%
CAATCCATTTATCCTGATAA+AGG + chr8.2:68453591-68453610 None:intergenic 30.0%
CCCCTCAAAAAAAATTCTAT+AGG - chr8.2:68454141-68454160 MS.gene98200:intron 30.0%
GAAATCATTATCAGAATGCT+TGG + chr8.2:68453527-68453546 None:intergenic 30.0%
GATAGGACTAATGTCTATAT+TGG - chr8.2:68454844-68454863 MS.gene98200:CDS 30.0%
GATTAAATAGAACTCTCATG+TGG + chr8.2:68453240-68453259 None:intergenic 30.0%
GGAAAATACATGAGAAATCT+AGG - chr8.2:68453361-68453380 MS.gene98200:intron 30.0%
TACTATATACCTATAACCAG+TGG - chr8.2:68454082-68454101 MS.gene98200:intron 30.0%
TAGGCTAACTCATATTTATC+AGG + chr8.2:68452365-68452384 None:intergenic 30.0%
TCCAAACCATCTAAAAGATA+TGG - chr8.2:68453426-68453445 MS.gene98200:intron 30.0%
TCTGATAAGAGTTCCTTTAT+AGG + chr8.2:68455138-68455157 None:intergenic 30.0%
TGAACAACTTGAAGAAACAA+CGG - chr8.2:68453006-68453025 MS.gene98200:intron 30.0%
! AATCTCTGTCAAAGAACTTT+TGG + chr8.2:68454039-68454058 None:intergenic 30.0%
! ATATAGTATCCACCTCTTTT+TGG + chr8.2:68454070-68454089 None:intergenic 30.0%
! ATCTCTGTCAAAGAACTTTT+GGG + chr8.2:68454038-68454057 None:intergenic 30.0%
! ATTACACATATTAGGTTGCA+TGG + chr8.2:68454639-68454658 None:intergenic 30.0%
! CACAATCCATATCTTTTAGA+TGG + chr8.2:68453435-68453454 None:intergenic 30.0%
! CTTTGTTATCAATATCTGCA+AGG + chr8.2:68452418-68452437 None:intergenic 30.0%
! GATTTTGCATTTCCAAAAAG+AGG - chr8.2:68454055-68454074 MS.gene98200:intron 30.0%
! TCCATATCTTTTAGATGGTT+TGG + chr8.2:68453430-68453449 None:intergenic 30.0%
!! AAATCATCATTGTGCTGTTT+CGG - chr8.2:68454661-68454680 MS.gene98200:intron 30.0%
!! ATCAGGTTGATGATGAAATA+AGG + chr8.2:68452348-68452367 None:intergenic 30.0%
!! ATTTGAAAGATGGTGTTATG+AGG - chr8.2:68452543-68452562 MS.gene98200:intron 30.0%
!! GTTGATGATGAAATAAGGTA+GGG + chr8.2:68452343-68452362 None:intergenic 30.0%
!!! ATAGAATTTTTTTTGAGGGG+TGG + chr8.2:68454141-68454160 None:intergenic 30.0%
!!! TAGAATTTTTTTTGAGGGGT+GGG + chr8.2:68454140-68454159 None:intergenic 30.0%
AAAACCCACTTGAAAAAGTC+CGG + chr8.2:68454217-68454236 None:intergenic 35.0%
AAAGCTCTATGGACCTATAA+AGG - chr8.2:68455122-68455141 MS.gene98200:CDS 35.0%
AAATCCTCAAGAACACTCAA+AGG + chr8.2:68452527-68452546 None:intergenic 35.0%
AACTGTGGTTTCTCTGTATA+TGG + chr8.2:68455172-68455191 None:intergenic 35.0%
AAGACATTCCTATAGTATGC+AGG - chr8.2:68452723-68452742 MS.gene98200:intron 35.0%
AATCCTCAAGAACACTCAAA+GGG + chr8.2:68452526-68452545 None:intergenic 35.0%
ACTGTGGTTTCTCTGTATAT+GGG + chr8.2:68455171-68455190 None:intergenic 35.0%
ACTTGATCCTTCAAACAGAT+AGG - chr8.2:68454827-68454846 MS.gene98200:CDS 35.0%
AGAGTTCTTGCAAATCATGT+TGG - chr8.2:68455048-68455067 MS.gene98200:CDS 35.0%
ATTGATATTACACCTGTTCC+TGG - chr8.2:68453607-68453626 MS.gene98200:intron 35.0%
CATACTATAGGAATGTCTTC+TGG + chr8.2:68452722-68452741 None:intergenic 35.0%
CATGACGGTTTATATCGAAA+AGG - chr8.2:68454247-68454266 MS.gene98200:intron 35.0%
CATTAGTCCTATCTGTTTGA+AGG + chr8.2:68454837-68454856 None:intergenic 35.0%
CTTGGACAACTTAAGCAAAA+TGG - chr8.2:68453948-68453967 MS.gene98200:intron 35.0%
GAAACAAAAGCTGGTGTAAA+AGG - chr8.2:68452290-68452309 MS.gene98200:CDS 35.0%
GAACTATTGTCAGAAGCTTT+AGG - chr8.2:68453397-68453416 MS.gene98200:intron 35.0%
GCATTTGATGAAACAAAAGC+TGG - chr8.2:68452281-68452300 MS.gene98200:CDS 35.0%
GTTCTTGAGGATTTGAAAGA+TGG - chr8.2:68452533-68452552 MS.gene98200:intron 35.0%
TATATACCTATAACCAGTGG+CGG - chr8.2:68454085-68454104 MS.gene98200:intron 35.0%
TCCATATACCTGCATACTAT+AGG + chr8.2:68452734-68452753 None:intergenic 35.0%
TCCTATAGTATGCAGGTATA+TGG - chr8.2:68452730-68452749 MS.gene98200:intron 35.0%
TGTTAAGGAACTGTCGTTAT+AGG + chr8.2:68454484-68454503 None:intergenic 35.0%
TTGATATTACACCTGTTCCT+GGG - chr8.2:68453608-68453627 MS.gene98200:intron 35.0%
TTTGCATTTCCAAAAAGAGG+TGG - chr8.2:68454058-68454077 MS.gene98200:intron 35.0%
! AAAGAACTTTTGGGCACATA+TGG + chr8.2:68454029-68454048 None:intergenic 35.0%
! AAAGAAGCATGTGAAACATG+GGG - chr8.2:68452473-68452492 MS.gene98200:intron 35.0%
! AAAGATATGGATTGTGCTGA+AGG - chr8.2:68453439-68453458 MS.gene98200:intron 35.0%
! AATAACATGGCTTGTGTTGT+AGG + chr8.2:68452384-68452403 None:intergenic 35.0%
! GAAAGAAGCATGTGAAACAT+GGG - chr8.2:68452472-68452491 MS.gene98200:intron 35.0%
! GTTAGGCTTGTTTGTATAAG+TGG + chr8.2:68452234-68452253 None:intergenic 35.0%
! TAATGTTGGAGATCTTTTGC+AGG - chr8.2:68453642-68453661 MS.gene98200:intron 35.0%
! TATAGGAATGTCTTCTGGTT+TGG + chr8.2:68452717-68452736 None:intergenic 35.0%
! TGAAAGAAGCATGTGAAACA+TGG - chr8.2:68452471-68452490 MS.gene98200:intron 35.0%
! TGGTCTGTTTTACTTTGTTC+AGG + chr8.2:68454595-68454614 None:intergenic 35.0%
! TTTGAAGCAAAAGGACTAGA+TGG - chr8.2:68455210-68455229 MS.gene98200:CDS 35.0%
!! ATAGGAATGTCTTCTGGTTT+GGG + chr8.2:68452716-68452735 None:intergenic 35.0%
!! GGTTGATGATGAAATAAGGT+AGG + chr8.2:68452344-68452363 None:intergenic 35.0%
!! GTAGCATACTTTGAAGCAAA+AGG - chr8.2:68455201-68455220 MS.gene98200:CDS 35.0%
!! GTGTGTTACTTTAGTAGCTA+TGG + chr8.2:68454615-68454634 None:intergenic 35.0%
!! TGTTATGAGGTTTTATGAGC+AGG - chr8.2:68452556-68452575 MS.gene98200:intron 35.0%
!!! ATGAGAGTGTTGGTTTTAGA+AGG + chr8.2:68453778-68453797 None:intergenic 35.0%
!!! TGAGAGTGTTGGTTTTAGAA+GGG + chr8.2:68453777-68453796 None:intergenic 35.0%
AAACCCACTTGAAAAAGTCC+GGG + chr8.2:68454216-68454235 None:intergenic 40.0%
AATCCCTTTGAGTGTTCTTG+AGG - chr8.2:68452520-68452539 MS.gene98200:intron 40.0%
AGGATTCTCTCCTCTCAATA+TGG + chr8.2:68454006-68454025 None:intergenic 40.0%
ATATCTGCAAGGTCTATGAC+AGG + chr8.2:68452407-68452426 None:intergenic 40.0%
ATGTCTAGCATGAGTCGTAT+CGG - chr8.2:68452834-68452853 MS.gene98200:intron 40.0%
CAGGACAAGGAGGATAATAA+TGG + chr8.2:68453480-68453499 None:intergenic 40.0%
CGGAGCTAGAAAAAATATCG+GGG + chr8.2:68454455-68454474 None:intergenic 40.0%
GCAATGTAAGCAACAACAGA+GGG + chr8.2:68454784-68454803 None:intergenic 40.0%
GCAGCAACACTTTAGATTGT+AGG - chr8.2:68452803-68452822 MS.gene98200:intron 40.0%
GCGGAGCTAGAAAAAATATC+GGG + chr8.2:68454456-68454475 None:intergenic 40.0%
GGAGCTAGAAAAAATATCGG+GGG + chr8.2:68454454-68454473 None:intergenic 40.0%
GGCGGAGCTAGAAAAAATAT+CGG + chr8.2:68454457-68454476 None:intergenic 40.0%
GGTCTATGACAGGAATAACA+TGG + chr8.2:68452397-68452416 None:intergenic 40.0%
GGTTGAATTTCAGTGAATCG+TGG - chr8.2:68453027-68453046 MS.gene98200:intron 40.0%
TATAGGTCCATAGAGCTTTG+AGG + chr8.2:68455121-68455140 None:intergenic 40.0%
TATCCTGATAAAGGACTTGG+AGG + chr8.2:68453582-68453601 None:intergenic 40.0%
TGATATTACACCTGTTCCTG+GGG - chr8.2:68453609-68453628 MS.gene98200:intron 40.0%
TGCAATGTAAGCAACAACAG+AGG + chr8.2:68454785-68454804 None:intergenic 40.0%
TGTCCAAGTCACTTATCACT+CGG + chr8.2:68453936-68453955 None:intergenic 40.0%
! ATTATGCTCGATGAGAGTGT+TGG + chr8.2:68453788-68453807 None:intergenic 40.0%
!! GGTGTAAAAGGACTTGTTGA+TGG - chr8.2:68452302-68452321 MS.gene98200:CDS 40.0%
!! GTAAAAGGACTTGTTGATGG+AGG - chr8.2:68452305-68452324 MS.gene98200:CDS 40.0%
!!! GTTGCATGTTTTTTCTGCAC+AGG - chr8.2:68455084-68455103 MS.gene98200:CDS 40.0%
ACATTAACTATGAGAGCCCC+AGG + chr8.2:68453628-68453647 None:intergenic 45.0%
AGGTCATCCTCAAAGCTCTA+TGG - chr8.2:68455111-68455130 MS.gene98200:CDS 45.0%
ATAGCTCACCGGCACTTAAT+TGG - chr8.2:68452654-68452673 MS.gene98200:CDS 45.0%
ATGTAACCACGGTGTCTTGT+TGG + chr8.2:68452863-68452882 None:intergenic 45.0%
CTTCTCCAAGACCATATTGG+TGG - chr8.2:68453556-68453575 MS.gene98200:intron 45.0%
GCTAGAAAAAATATCGGGGG+TGG + chr8.2:68454451-68454470 None:intergenic 45.0%
GGGGCTCTCATAGTTAATGT+TGG - chr8.2:68453628-68453647 MS.gene98200:intron 45.0%
GTATCCCTCCAATTAAGTGC+CGG + chr8.2:68452665-68452684 None:intergenic 45.0%
GTGCTTCTCCAAGACCATAT+TGG - chr8.2:68453553-68453572 MS.gene98200:intron 45.0%
GTGGTTTCTCTGTATATGGG+AGG + chr8.2:68455168-68455187 None:intergenic 45.0%
TGCTACATAGTCAGCAACTG+TGG + chr8.2:68455187-68455206 None:intergenic 45.0%
! AGGCTTATATGGGTTGAGGT+GGG - chr8.2:68454108-68454127 MS.gene98200:intron 45.0%
! GAACTTTTGGGCACATATGG+AGG + chr8.2:68454026-68454045 None:intergenic 45.0%
! GTGAAGCACTAACACAAACC+AGG + chr8.2:68452949-68452968 None:intergenic 45.0%
!! AGAGCTTTGAGGATGACCTA+TGG + chr8.2:68455110-68455129 None:intergenic 45.0%
!! TCTTCTGGTTTGGGAGTATC+AGG + chr8.2:68452707-68452726 None:intergenic 45.0%
!!! GTTTTTTCTGCACAGGCCAT+AGG - chr8.2:68455091-68455110 MS.gene98200:CDS 45.0%
ACTGTCGTTATAGGCAGTGG+CGG + chr8.2:68454475-68454494 None:intergenic 50.0%
AGCAAAATGGTCACGCTCAC+TGG - chr8.2:68453961-68453980 MS.gene98200:intron 50.0%
ATACCTATAACCAGTGGCGG+AGG - chr8.2:68454088-68454107 MS.gene98200:intron 50.0%
CCACTTGAAAAAGTCCGGGT+GGG + chr8.2:68454212-68454231 None:intergenic 50.0%
CCTGAACCAGAACTGACTGT+GGG - chr8.2:68453496-68453515 MS.gene98200:intron 50.0%
CTCACCGGCACTTAATTGGA+GGG - chr8.2:68452658-68452677 MS.gene98200:CDS 50.0%
GCTGAAGGACTACTTGCTCT+TGG - chr8.2:68453454-68453473 MS.gene98200:intron 50.0%
GGAACTGTCGTTATAGGCAG+TGG + chr8.2:68454478-68454497 None:intergenic 50.0%
GGTCCGAGTGATAAGTGACT+TGG - chr8.2:68453930-68453949 MS.gene98200:intron 50.0%
GTTGTTCCCACAGTCAGTTC+TGG + chr8.2:68453505-68453524 None:intergenic 50.0%
TAGTATCGTCTCTGGTGTCC+TGG - chr8.2:68452928-68452947 MS.gene98200:intron 50.0%
TCCTGAACCAGAACTGACTG+TGG - chr8.2:68453495-68453514 MS.gene98200:intron 50.0%
TGGCCTCCAAGTCCTTTATC+AGG - chr8.2:68453576-68453595 MS.gene98200:intron 50.0%
! GAGGCTTATATGGGTTGAGG+TGG - chr8.2:68454107-68454126 MS.gene98200:intron 50.0%
! TTTTTCTCAAGTGGCCCACC+CGG - chr8.2:68454195-68454214 MS.gene98200:intron 50.0%
!! AGTTCTGGTTCAGGACAAGG+AGG + chr8.2:68453490-68453509 None:intergenic 50.0%
!! GTCAGTTCTGGTTCAGGACA+AGG + chr8.2:68453493-68453512 None:intergenic 50.0%
!!! CCACCCGGACTTTTTCAAGT+GGG - chr8.2:68454210-68454229 MS.gene98200:intron 50.0%
ACTATGAGAGCCCCAGGAAC+AGG + chr8.2:68453622-68453641 None:intergenic 55.0%
CCCACTTGAAAAAGTCCGGG+TGG + chr8.2:68454213-68454232 None:intergenic 55.0%
CGGATACCAACAAGACACCG+TGG - chr8.2:68452854-68452873 MS.gene98200:intron 55.0%
GACAGAGTGACCTTGCTACC+AGG + chr8.2:68453056-68453075 None:intergenic 55.0%
GCTCACCGGCACTTAATTGG+AGG - chr8.2:68452657-68452676 MS.gene98200:CDS 55.0%
GGACTTGGAGGCCACCAATA+TGG + chr8.2:68453570-68453589 None:intergenic 55.0%
GGAGGCCACCAATATGGTCT+TGG + chr8.2:68453564-68453583 None:intergenic 55.0%
TTCAGTGAATCGTGGCAGCC+TGG - chr8.2:68453035-68453054 MS.gene98200:intron 55.0%
! AAGCCTCCGCCACTGGTTAT+AGG + chr8.2:68454094-68454113 None:intergenic 55.0%
! ACCAGTGGCGGAGGCTTATA+TGG - chr8.2:68454097-68454116 MS.gene98200:intron 55.0%
! ATATGGGTTGAGGTGGGCCA+CGG - chr8.2:68454114-68454133 MS.gene98200:intron 55.0%
! CCAGTGGCGGAGGCTTATAT+GGG - chr8.2:68454098-68454117 MS.gene98200:intron 55.0%
! GCGGAGGCTTATATGGGTTG+AGG - chr8.2:68454104-68454123 MS.gene98200:intron 55.0%
! GGTCTTGGAGAAGCACAGTG+AGG + chr8.2:68453549-68453568 None:intergenic 55.0%
!! CCCACAGTCAGTTCTGGTTC+AGG + chr8.2:68453499-68453518 None:intergenic 55.0%
!!! CCCACCCGGACTTTTTCAAG+TGG - chr8.2:68454209-68454228 MS.gene98200:intron 55.0%
!!! TTTTTTTGAGGGGTGGGCCG+TGG + chr8.2:68454134-68454153 None:intergenic 55.0%
ATCGTGGCAGCCTGGTAGCA+AGG - chr8.2:68453043-68453062 MS.gene98200:intron 60.0%
CCCATATAAGCCTCCGCCAC+TGG + chr8.2:68454101-68454120 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 68452224 68455263 68452224 ID=MS.gene98200
chr8.2 mRNA 68452224 68455263 68452224 ID=MS.gene98200.t1;Parent=MS.gene98200
chr8.2 exon 68454743 68455263 68454743 ID=MS.gene98200.t1.exon1;Parent=MS.gene98200.t1
chr8.2 CDS 68454743 68455263 68454743 ID=cds.MS.gene98200.t1;Parent=MS.gene98200.t1
chr8.2 exon 68452622 68452728 68452622 ID=MS.gene98200.t1.exon2;Parent=MS.gene98200.t1
chr8.2 CDS 68452622 68452728 68452622 ID=cds.MS.gene98200.t1;Parent=MS.gene98200.t1
chr8.2 exon 68452224 68452381 68452224 ID=MS.gene98200.t1.exon3;Parent=MS.gene98200.t1
chr8.2 CDS 68452224 68452381 68452224 ID=cds.MS.gene98200.t1;Parent=MS.gene98200.t1
Gene Sequence

>MS.gene98200

ATGGGAACCACTTATACAAACAAGCCTAACCTTGATTCTATATTGAATGAACGCAAAGCATTTGATGAAACAAAAGCTGGTGTAAAAGGACTTGTTGATGGAGGACTTGAGAAGATCCCTACCTTATTTCATCATCAACCTGATAAATATGAGTTAGCCTACAACACAAGCCATGTTATTCCTGTCATAGACCTTGCAGATATTGATAACAAAGATCCAAGTATTCACCAAAAAATTGTTGACAAAGTGAAAGAAGCATGTGAAACATGGGGATTTTTTCAAGTTGTTAATCATGGAATCCCTTTGAGTGTTCTTGAGGATTTGAAAGATGGTGTTATGAGGTTTTATGAGCAGGATACAGAAGTCAAAAAAGATTTGTATACTAGAGATAGGCATAGATCCTTTATTTATAATAGCAATTTTGATATTTATAGCTCACCGGCACTTAATTGGAGGGATACTTTTATATGTTACTTGGCTCCTGATACTCCCAAACCAGAAGACATTCCTATAGTATGCAGGTATATGGATCTGTATAAAATTTATGTACTATTTCAACTATGGTTATTATTGTTAGTTGCAGCAACACTTTAGATTGTAGGCATGTATGATGTCTAGCATGAGTCGTATCGGATACCAACAAGACACCGTGGTTACATTCAATTATATCATATTTTTAATTCACTGTGTCCACGTATCAATATTAGTATCGTCTCTGGTGTCCTGGTTTGTGTTAGTGCTTCACAAGATTTAAGTTAAATACTTAAATTTTTTTTTCTATTTGAACAACTTGAAGAAACAACGGTTGAATTTCAGTGAATCGTGGCAGCCTGGTAGCAAGGTCACTCTGTCACTTACAATAGTCTGAGTCGCGTATTGAAGTTGTTCTCAAACTTAGTTTTTTGCTTGTTAAATGTTGTTTTTATCGGTGAAATTACTTTCATATCCTTATTTTAAATTAATTAACGAAGTAGCTTTGATTTCCTTTTCATGTTAACTAGAAATTTATCTTTCCACATGAGAGTTCTATTTAATCTAACTGACAGAAATTCTAAAAGGTCTAAAATTGAATTTAATCCTCAATTTTTTTCTTTTTAATTGCCTACTTATTTTTGCAGAGATATATTGCTAGAATATGGAAAATACATGAGAAATCTAGGGATTTTATTGTTTGAACTATTGTCAGAAGCTTTAGGTCTGAATCCAAACCATCTAAAAGATATGGATTGTGCTGAAGGACTACTTGCTCTTGGCCATTATTATCCTCCTTGTCCTGAACCAGAACTGACTGTGGGAACAACCAAGCATTCTGATAATGATTTCCTCACTGTGCTTCTCCAAGACCATATTGGTGGCCTCCAAGTCCTTTATCAGGATAAATGGATTGATATTACACCTGTTCCTGGGGCTCTCATAGTTAATGTTGGAGATCTTTTGCAGGCGAGTTTTCTGCATTTTAATGTGCATATTTCCATAAACTTTTAGTAATGTATTATTAACATATTTCTGTCTTCCAATATATCATTTTCATAATACTTTTTCTCTCATATCCCTTCTAAAACCAACACTCTCATCGAGCATAATAGAATGACTCAATTTATCATGGCTCATCAAAACAGAACTTAATACACATATGCATCAATTAATTAGTGCTTTAGAATAATTAATCATAGTTAATATGTTAATAATACATCTTAATAAAGGTTGGTCCGAGTGATAAGTGACTTGGACAACTTAAGCAAAATGGTCACGCTCACTGGATTTTGCATATGAATAAAACCATATTGAGAGGAGAGAATCCTCCATATGTGCCCAAAAGTTCTTTGACAGAGATTTTGCATTTCCAAAAAGAGGTGGATACTATATACCTATAACCAGTGGCGGAGGCTTATATGGGTTGAGGTGGGCCACGGCCCACCCCTCAAAAAAAATTCTATAGGGAAATTACAAAAATACCTTCAACATATTTTATTTTTCTCAAGTGGCCCACCCGGACTTTTTCAAGTGGGTTTTTAAATGATAGCATGACGGTTTATATCGAAAAGGAAATAAGTGCAAGTATTAGTTCTGAGTTAGTTATTGATGATTTCAAGTTAGTTGGATCGCGTAACGACTTATTTTAATTTTCTAAGGTATGTAGTTTACTTTTTTGATGAAACTTTGTGCTTAGCGTTTATTACAATAGAAAAATTTATGTTTATATATTAGAGTATATTTTGCTGGACCACCCCCGATATTTTTTCTAGCTCCGCCACTGCCTATAACGACAGTTCCTTAACAATTGATTGCGTAAATCCACATAATTGATTATTAATCTAACATAATCAACAAAAATCAATATGGCACTTATTGAACAATCAGAATGTGTCCTGAACAAAGTAAAACAGACCATAGCTACTAAAGTAACACACACCATGCAACCTAATATGTGTAATCAAAATCATCATTGTGCTGTTTCGGTTCTTGTAATTAATCATTTGCATTTTCAACTTGACTTCAAGTATGTAGCATGCCTTATCTCTCATCTTATTTAAGGTGTTATGTTATATCTTTTGTGCCCTCTGTTGTTGCTTACATTGCAAGTAATTTGACTTTCAACATAAACTTGATCCTTCAAACAGATAGGACTAATGTCTATATTGGTAAGAAATAGGAAAAATGATTTTTTCTCATATTAGAATGATATAGTTGACCTAATGTAATACTTGTTTGTTTTTATTTGTTGTTGTGTGAAGAATCAATGATAGATAAAAACATATAGCTGATTTTGTTTGTTTGTTTGAATTGTAGCTTATAACAAATGACAAATTCAAGAGTGTTGAACAGAGTTCTTGCAAATCATGTTGGTCCAAGAATATCTGTTGCATGTTTTTTCTGCACAGGCCATAGGTCATCCTCAAAGCTCTATGGACCTATAAAGGAACTCTTATCAGAAGACAATCCTCCCATATACAGAGAAACCACAGTTGCTGACTATGTAGCATACTTTGAAGCAAAAGGACTAGATGGTACTTCTGCTCTTACACATTTCAAGATTTGA
Protein sequence

>MS.gene98200.t1

MGTTYTNKPNLDSILNERKAFDETKAGVKGLVDGGLEKIPTLFHHQPDKYELAYNTSHVIPVIDLADIDNKDPSIHQKIVDKVKEACETWGFFQVVNHGIPLSVLEDLKDGVMRFYEQDTEVKKDLYTRDRHRSFIYNSNFDIYSSPALNWRDTFICYLAPDTPKPEDIPIVCRCYVISFVPSVVAYIASNLTFNINLILQTDRTNVYIGHRSSSKLYGPIKELLSEDNPPIYRETTVADYVAYFEAKGLDGTSALTHFKI