Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98565.t1 | XP_003616887.1 | 80.1 | 762 | 137 | 4 | 1 | 757 | 1 | 752 | 0.00E+00 | 1139.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98565.t1 | G7KHA2 | 80.1 | 762 | 137 | 4 | 1 | 757 | 1 | 752 | 0.0e+00 | 1139.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058168 | MS.gene98565 | 0.80233 | 5.91E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98565.t1 | MTR_5g085340 | 83.202 | 762 | 113 | 4 | 1 | 757 | 1 | 752 | 0.0 | 1254 |
MS.gene98565.t1 | MTR_5g085350 | 78.768 | 763 | 137 | 8 | 1 | 757 | 1 | 744 | 0.0 | 1153 |
MS.gene98565.t1 | MTR_5g085350 | 78.113 | 763 | 129 | 9 | 1 | 757 | 1 | 731 | 0.0 | 1148 |
MS.gene98565.t1 | MTR_5g085360 | 56.489 | 786 | 266 | 12 | 1 | 755 | 1 | 741 | 0.0 | 820 |
MS.gene98565.t1 | MTR_3g051060 | 43.570 | 762 | 359 | 14 | 22 | 757 | 26 | 742 | 0.0 | 585 |
MS.gene98565.t1 | MTR_3g050500 | 39.012 | 769 | 371 | 21 | 17 | 748 | 21 | 728 | 9.61e-146 | 444 |
MS.gene98565.t1 | MTR_3g058570 | 53.735 | 415 | 158 | 7 | 353 | 757 | 2 | 392 | 2.75e-138 | 413 |
MS.gene98565.t1 | MTR_2g020510 | 35.047 | 739 | 413 | 14 | 24 | 753 | 9 | 689 | 2.03e-137 | 422 |
MS.gene98565.t1 | MTR_2g020450 | 35.270 | 740 | 412 | 18 | 24 | 753 | 9 | 691 | 4.68e-126 | 392 |
MS.gene98565.t1 | MTR_2g020470 | 33.333 | 747 | 397 | 16 | 24 | 753 | 9 | 671 | 1.99e-124 | 387 |
MS.gene98565.t1 | MTR_3g058550 | 53.158 | 190 | 81 | 2 | 52 | 233 | 3 | 192 | 1.04e-57 | 196 |
MS.gene98565.t1 | MTR_2g438400 | 33.993 | 303 | 192 | 2 | 439 | 740 | 246 | 541 | 1.10e-45 | 172 |
MS.gene98565.t1 | MTR_2g438740 | 34.694 | 294 | 183 | 3 | 449 | 740 | 277 | 563 | 9.67e-45 | 170 |
MS.gene98565.t1 | MTR_2g017930 | 37.013 | 308 | 175 | 5 | 446 | 747 | 357 | 651 | 7.84e-44 | 169 |
MS.gene98565.t1 | MTR_2g017930 | 28.022 | 182 | 123 | 3 | 57 | 231 | 36 | 216 | 3.27e-13 | 73.6 |
MS.gene98565.t1 | MTR_2g438720 | 33.974 | 312 | 187 | 6 | 438 | 740 | 387 | 688 | 1.52e-43 | 168 |
MS.gene98565.t1 | MTR_3g055310 | 33.564 | 289 | 181 | 5 | 451 | 737 | 60 | 339 | 6.49e-43 | 159 |
MS.gene98565.t1 | MTR_2g438700 | 34.405 | 311 | 193 | 6 | 438 | 743 | 385 | 689 | 9.31e-43 | 166 |
MS.gene98565.t1 | MTR_2g438440 | 33.003 | 303 | 195 | 2 | 439 | 740 | 387 | 682 | 1.03e-42 | 166 |
MS.gene98565.t1 | MTR_3g055310 | 33.564 | 289 | 181 | 5 | 451 | 737 | 123 | 402 | 1.66e-42 | 160 |
MS.gene98565.t1 | MTR_3g055310 | 33.564 | 289 | 181 | 5 | 451 | 737 | 175 | 454 | 4.72e-42 | 160 |
MS.gene98565.t1 | MTR_3g055310 | 32.770 | 296 | 188 | 5 | 451 | 744 | 201 | 487 | 6.81e-42 | 160 |
MS.gene98565.t1 | MTR_3g055310 | 32.770 | 296 | 188 | 5 | 451 | 744 | 203 | 489 | 6.90e-42 | 160 |
MS.gene98565.t1 | MTR_3g055310 | 33.564 | 289 | 181 | 5 | 451 | 737 | 228 | 507 | 1.50e-41 | 159 |
MS.gene98565.t1 | MTR_2g438640 | 34.694 | 294 | 178 | 6 | 451 | 740 | 404 | 687 | 7.40e-41 | 160 |
MS.gene98565.t1 | MTR_5g091220 | 33.673 | 294 | 184 | 5 | 451 | 742 | 316 | 600 | 5.18e-40 | 156 |
MS.gene98565.t1 | MTR_2g438640 | 33.106 | 293 | 158 | 5 | 451 | 740 | 404 | 661 | 3.03e-38 | 152 |
MS.gene98565.t1 | MTR_5g028130 | 28.698 | 338 | 214 | 6 | 404 | 739 | 19 | 331 | 2.23e-36 | 140 |
MS.gene98565.t1 | MTR_5g028190 | 30.211 | 331 | 223 | 5 | 410 | 739 | 204 | 527 | 2.32e-36 | 144 |
MS.gene98565.t1 | MTR_3g455790 | 30.420 | 286 | 188 | 5 | 451 | 734 | 311 | 587 | 1.42e-33 | 137 |
MS.gene98565.t1 | MTR_5g028930 | 29.392 | 296 | 188 | 3 | 448 | 733 | 321 | 605 | 7.26e-32 | 132 |
MS.gene98565.t1 | MTR_5g028450 | 30.928 | 291 | 191 | 5 | 449 | 735 | 2 | 286 | 1.33e-31 | 125 |
MS.gene98565.t1 | MTR_2g438760 | 30.034 | 293 | 195 | 4 | 451 | 740 | 273 | 558 | 1.81e-31 | 130 |
MS.gene98565.t1 | MTR_3g051020 | 43.396 | 159 | 86 | 3 | 24 | 182 | 26 | 180 | 9.49e-31 | 120 |
MS.gene98565.t1 | MTR_3g452020 | 27.719 | 285 | 197 | 3 | 451 | 734 | 136 | 412 | 2.31e-29 | 122 |
MS.gene98565.t1 | MTR_2g438640 | 37.297 | 185 | 111 | 3 | 558 | 740 | 403 | 584 | 6.95e-29 | 122 |
MS.gene98565.t1 | MTR_3g452020 | 27.719 | 285 | 197 | 3 | 451 | 734 | 312 | 588 | 7.26e-29 | 122 |
MS.gene98565.t1 | MTR_6g017215 | 31.351 | 185 | 125 | 2 | 555 | 738 | 6 | 189 | 9.62e-26 | 107 |
MS.gene98565.t1 | MTR_5g028690 | 31.429 | 175 | 115 | 2 | 570 | 739 | 56 | 230 | 1.28e-19 | 89.4 |
MS.gene98565.t1 | MTR_5g028900 | 32.237 | 152 | 88 | 3 | 570 | 717 | 17 | 157 | 8.65e-18 | 81.6 |
MS.gene98565.t1 | MTR_2g438470 | 36.522 | 115 | 71 | 2 | 517 | 630 | 384 | 497 | 3.75e-17 | 85.5 |
MS.gene98565.t1 | MTR_5g028840 | 32.447 | 188 | 112 | 4 | 555 | 733 | 2 | 183 | 3.85e-17 | 81.3 |
MS.gene98565.t1 | MTR_1g113760 | 25.497 | 302 | 206 | 6 | 451 | 743 | 243 | 534 | 5.03e-17 | 85.5 |
MS.gene98565.t1 | MTR_5g028110 | 33.566 | 143 | 91 | 4 | 599 | 739 | 28 | 168 | 9.14e-16 | 76.3 |
MS.gene98565.t1 | MTR_2g438580 | 41.026 | 78 | 46 | 0 | 570 | 647 | 3 | 80 | 3.74e-15 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98565.t1 | AT3G18670 | 32.895 | 304 | 195 | 3 | 451 | 753 | 351 | 646 | 2.01e-42 | 164 |
MS.gene98565.t1 | AT3G18670 | 24.651 | 215 | 149 | 5 | 31 | 239 | 60 | 267 | 2.76e-12 | 70.9 |
MS.gene98565.t1 | AT3G18670 | 32.895 | 304 | 195 | 3 | 451 | 753 | 296 | 591 | 2.04e-42 | 163 |
MS.gene98565.t1 | AT5G35810 | 32.353 | 306 | 184 | 7 | 446 | 738 | 31 | 326 | 8.56e-39 | 147 |
MS.gene98565.t1 | AT5G04700 | 35.498 | 231 | 147 | 1 | 518 | 746 | 428 | 658 | 5.18e-38 | 151 |
MS.gene98565.t1 | AT5G04690 | 35.065 | 231 | 146 | 2 | 518 | 746 | 386 | 614 | 1.11e-36 | 147 |
MS.gene98565.t1 | AT5G04690 | 35.065 | 231 | 146 | 2 | 518 | 746 | 406 | 634 | 1.62e-36 | 146 |
MS.gene98565.t1 | AT5G04690 | 31.731 | 312 | 199 | 6 | 438 | 746 | 348 | 648 | 1.92e-36 | 146 |
MS.gene98565.t1 | AT5G04730 | 29.882 | 338 | 216 | 8 | 410 | 740 | 262 | 585 | 1.70e-35 | 143 |
MS.gene98565.t1 | AT3G54065 | 33.333 | 210 | 133 | 1 | 541 | 743 | 8 | 217 | 2.07e-33 | 129 |
MS.gene98565.t1 | AT5G04680 | 32.500 | 240 | 150 | 3 | 518 | 746 | 401 | 639 | 5.19e-31 | 130 |
MS.gene98565.t1 | AT5G04680 | 32.627 | 236 | 147 | 3 | 518 | 742 | 292 | 526 | 8.56e-31 | 128 |
MS.gene98565.t1 | AT5G04680 | 32.500 | 240 | 150 | 3 | 518 | 746 | 415 | 653 | 8.57e-31 | 129 |
MS.gene98565.t1 | AT5G04680 | 32.500 | 240 | 150 | 3 | 518 | 746 | 444 | 682 | 1.21e-30 | 129 |
Find 138 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGTTCTTGTTCTTTCTTC+TGG | 0.038655 | 5.2:-72714212 | None:intergenic |
AAACAAGTTGTTGCGTAAAT+TGG | 0.148570 | 5.2:-72717532 | None:intergenic |
TTCTTCTGGGTCTTGTTTGA+TGG | 0.210847 | 5.2:-72714198 | None:intergenic |
AAAATATGTAAGTGTATTAT+TGG | 0.211060 | 5.2:+72711696 | MS.gene98565:CDS |
GGACTTTGCTTCTCTGTTAC+TGG | 0.211203 | 5.2:+72717328 | MS.gene98565:CDS |
AAATGATGTGGGATATAAAA+TGG | 0.216030 | 5.2:+72716235 | MS.gene98565:CDS |
TTTGCCATTTCTTCGCTTAT+CGG | 0.224342 | 5.2:+72717307 | MS.gene98565:CDS |
AGTACACATTGGAAGGTAAA+TGG | 0.231452 | 5.2:+72711448 | MS.gene98565:CDS |
TTCTTCTGGATCTTGTTTGA+TGG | 0.241654 | 5.2:-72714156 | None:intergenic |
GTGGGATATAAAATGGTTTC+AGG | 0.281361 | 5.2:+72716242 | MS.gene98565:CDS |
ATTGCTTTGTGAGCTGGTTC+TGG | 0.293493 | 5.2:-72711501 | None:intergenic |
TCGTTCTTGTTCTTTCTTCT+GGG | 0.298583 | 5.2:-72714211 | None:intergenic |
AAAGGAAGAAGTTGACAAAA+AGG | 0.298922 | 5.2:+72715909 | MS.gene98565:CDS |
AAAGTTCAAGCAACCTTTCA+TGG | 0.305274 | 5.2:+72713120 | MS.gene98565:CDS |
ACAAAATCGACTTAAAATTA+TGG | 0.305812 | 5.2:-72717507 | None:intergenic |
CGGTTGTGCCGCCGGGTACT+TGG | 0.306931 | 5.2:-72717240 | None:intergenic |
TTTCAATGTCTCAACAATAA+GGG | 0.308887 | 5.2:-72716070 | None:intergenic |
ATTGAAAACGAGAATGATTA+AGG | 0.309215 | 5.2:+72716086 | MS.gene98565:CDS |
CAAATCTCGACGAAAATCTT+TGG | 0.312718 | 5.2:-72717392 | None:intergenic |
AAATATGTAAGTGTATTATT+GGG | 0.317500 | 5.2:+72711697 | MS.gene98565:CDS |
TTGCCACTGAAACTTCTTCT+TGG | 0.320343 | 5.2:+72717412 | MS.gene98565:CDS |
TCAGCTGTTGAAGGCATTAA+TGG | 0.324445 | 5.2:+72714645 | MS.gene98565:CDS |
TATAAAGTGGTATAGTTATC+TGG | 0.336636 | 5.2:-72713486 | None:intergenic |
GAATCCTGCTCCGTCGTATC+TGG | 0.341785 | 5.2:+72717184 | MS.gene98565:CDS |
ATCTTCTTCGTCCAAATCTA+TGG | 0.349665 | 5.2:-72711559 | None:intergenic |
GCAGGCTTGCCTTCTAATAC+TGG | 0.371770 | 5.2:-72717274 | None:intergenic |
GGAGAATACAATATTGCATT+TGG | 0.380804 | 5.2:+72716158 | MS.gene98565:CDS |
GCCTTCATCGGTTGTGCCGC+CGG | 0.385688 | 5.2:-72717248 | None:intergenic |
ATTACATGTAGCCATAGATT+TGG | 0.386158 | 5.2:+72711548 | MS.gene98565:CDS |
TATATCCCACATCATTTGTA+AGG | 0.387340 | 5.2:-72716229 | None:intergenic |
GTACACACTCTTGGCCTTAC+GGG | 0.388425 | 5.2:+72714303 | MS.gene98565:CDS |
TATATACCTTGTTTGAAGTT+GGG | 0.389324 | 5.2:-72714751 | None:intergenic |
GGTAAACCTTGGCAGATTGC+TGG | 0.400538 | 5.2:+72716201 | MS.gene98565:CDS |
ACATAAAGAAAGTCAGATAA+AGG | 0.400939 | 5.2:+72715834 | MS.gene98565:CDS |
GTTCCAACGGCAACTGATAA+AGG | 0.401370 | 5.2:+72717625 | MS.gene98565:CDS |
TGCCACTGAAACTTCTTCTT+GGG | 0.402128 | 5.2:+72717413 | MS.gene98565:CDS |
CCATTTATTTAAAGAGTTGA+AGG | 0.402654 | 5.2:+72714585 | MS.gene98565:intron |
CTTGGTTCTTGCAATGGATA+AGG | 0.410815 | 5.2:+72716134 | MS.gene98565:CDS |
AACAAGTTGTTGCGTAAATT+GGG | 0.414969 | 5.2:-72717531 | None:intergenic |
CTTTGAGTTTGTGTCATGAA+TGG | 0.419985 | 5.2:-72716007 | None:intergenic |
AGGACTCAAAAGAAGAACTT+TGG | 0.420552 | 5.2:+72716106 | MS.gene98565:CDS |
TTGCAAAGTGACTATCCCTT+TGG | 0.422762 | 5.2:-72711835 | None:intergenic |
ATATATACCTTGTTTGAAGT+TGG | 0.427370 | 5.2:-72714752 | None:intergenic |
ATCAGTTGCCGTTGGAACCT+TGG | 0.431237 | 5.2:-72717620 | None:intergenic |
AAGTCCGATAAGCGAAGAAA+TGG | 0.432499 | 5.2:-72717311 | None:intergenic |
GAGATAATTGCTTTGTGAGC+TGG | 0.433016 | 5.2:-72711507 | None:intergenic |
TCTATACTTTGATCTTGTAA+TGG | 0.440450 | 5.2:+72717588 | MS.gene98565:CDS |
ATGAGTACTTACAGTGGTAT+AGG | 0.447687 | 5.2:-72713154 | None:intergenic |
TGTACACACTCTTGGCCTTA+CGG | 0.449429 | 5.2:+72714302 | MS.gene98565:CDS |
GAATAACTTGGTTCTTGCAA+TGG | 0.454265 | 5.2:+72716128 | MS.gene98565:CDS |
GCTATCCGAGGAGAATATTT+CGG | 0.455653 | 5.2:+72711897 | MS.gene98565:CDS |
CTGCAAAGAAGAAGCACATA+TGG | 0.460666 | 5.2:+72714617 | MS.gene98565:CDS |
ATTACAAGATCAAAGTATAG+AGG | 0.462561 | 5.2:-72717586 | None:intergenic |
AAGGTGGTCAACCAACTGAT+AGG | 0.468369 | 5.2:+72714695 | MS.gene98565:CDS |
AGAAGAACTTTGGAATAACT+TGG | 0.475550 | 5.2:+72716116 | MS.gene98565:CDS |
GTCGTATCTGGCCTTGTAGC+CGG | 0.482864 | 5.2:+72717196 | MS.gene98565:CDS |
AACTCCAAATAAAACAATGA+TGG | 0.483123 | 5.2:+72715867 | MS.gene98565:CDS |
GTACACATTGGAAGGTAAAT+GGG | 0.483948 | 5.2:+72711449 | MS.gene98565:CDS |
GAAGGCAGTCCAGTATTAGA+AGG | 0.486374 | 5.2:+72717265 | MS.gene98565:CDS |
AGGCATACTCGTGGAACCCC+TGG | 0.487025 | 5.2:+72713386 | MS.gene98565:intron |
GAAGTCAAATTTGAGAAAGA+TGG | 0.491199 | 5.2:+72713425 | MS.gene98565:CDS |
AACAAAACCTGAATATGAAA+AGG | 0.491310 | 5.2:+72715891 | MS.gene98565:CDS |
CCTTCATCGGTTGTGCCGCC+GGG | 0.497322 | 5.2:-72717247 | None:intergenic |
TTCTCCAATTAATAGCAGCT+TGG | 0.502333 | 5.2:-72711782 | None:intergenic |
TTAATAGCAGCTTGGAAAAG+AGG | 0.506298 | 5.2:-72711774 | None:intergenic |
TTATAAAAGACAGCAGTGAC+TGG | 0.507389 | 5.2:+72717146 | MS.gene98565:CDS |
TATCTTGCTCATATTTCCAA+AGG | 0.507693 | 5.2:+72711819 | MS.gene98565:CDS |
GGACCTTACGCAGCATTCAC+TGG | 0.509359 | 5.2:+72714670 | MS.gene98565:CDS |
ATGGCAAAGGCATCGAATGC+AGG | 0.510886 | 5.2:-72717292 | None:intergenic |
AGTAGAAGTGTTGTGGTACA+AGG | 0.516357 | 5.2:-72717063 | None:intergenic |
ATCTTGCTCATATTTCCAAA+GGG | 0.516972 | 5.2:+72711820 | MS.gene98565:CDS |
CGATCGATTTCCCTATCAGT+TGG | 0.518766 | 5.2:-72714706 | None:intergenic |
CGAAGGAAACACCGGCTACA+AGG | 0.520059 | 5.2:-72717207 | None:intergenic |
AGACTTGACAAACTCAAGAA+AGG | 0.521641 | 5.2:-72714274 | None:intergenic |
TCTGCATATGTACACACTCT+TGG | 0.522677 | 5.2:+72714294 | MS.gene98565:CDS |
CCCGGCGGCACAACCGATGA+AGG | 0.523089 | 5.2:+72717247 | MS.gene98565:CDS |
CAACATCTTGTACGAGATGA+TGG | 0.523957 | 5.2:+72711855 | MS.gene98565:CDS |
TTCGAGAAGTGAGAATTGAA+AGG | 0.531102 | 5.2:-72717363 | None:intergenic |
TTCAATGTCTCAACAATAAG+GGG | 0.532327 | 5.2:-72716069 | None:intergenic |
TACTTGGCTTGCTGTGGCGA+AGG | 0.532602 | 5.2:-72717224 | None:intergenic |
GGATTCGTTTATACCATGAA+AGG | 0.534712 | 5.2:-72713133 | None:intergenic |
GCAATTATCTCTGAATCAGC+TGG | 0.537823 | 5.2:+72711519 | MS.gene98565:CDS |
ATTTACCGAAATATTCTCCT+CGG | 0.541065 | 5.2:-72711902 | None:intergenic |
TTAAGTGAGTACACATTGGA+AGG | 0.542159 | 5.2:+72711441 | MS.gene98565:CDS |
TAATACTGGACTGCCTTCAT+CGG | 0.542610 | 5.2:-72717260 | None:intergenic |
AAGGCCAGATACGACGGAGC+AGG | 0.546469 | 5.2:-72717188 | None:intergenic |
ATGGAGTAGTCAGCTGTTGA+AGG | 0.548671 | 5.2:+72714636 | MS.gene98565:CDS |
CATTTGGCAGCAGAGGCACT+AGG | 0.552441 | 5.2:+72716174 | MS.gene98565:CDS |
TTCTTGTTCATCGAACCTAT+CGG | 0.553554 | 5.2:-72715806 | None:intergenic |
AATATTGCATTTGGCAGCAG+AGG | 0.563757 | 5.2:+72716167 | MS.gene98565:CDS |
GAAATATTCTCCTCGGATAG+CGG | 0.564100 | 5.2:-72711895 | None:intergenic |
GGCAGCAGAGGCACTAGGTG+AGG | 0.564778 | 5.2:+72716179 | MS.gene98565:CDS |
TGAAACAAATAATGAAGCAA+TGG | 0.566201 | 5.2:-72717455 | None:intergenic |
GTTCTAAAGTAGAAGTGTTG+TGG | 0.567191 | 5.2:-72717070 | None:intergenic |
CTTTGTTCAGATGTGTGCTG+AGG | 0.569842 | 5.2:-72713049 | None:intergenic |
AATATGTAAGTGTATTATTG+GGG | 0.573090 | 5.2:+72711698 | MS.gene98565:CDS |
TCACCTTTATCAGTTGCCGT+TGG | 0.574717 | 5.2:-72717628 | None:intergenic |
TTATTTGTTTCATTCTGCAG+TGG | 0.577345 | 5.2:+72717466 | MS.gene98565:CDS |
TACTTTAGAACCAACAAAGA+GGG | 0.578243 | 5.2:+72717082 | MS.gene98565:CDS |
TTACAAGATCAAAGTATAGA+GGG | 0.582219 | 5.2:-72717585 | None:intergenic |
AGGTGGTCAACCAACTGATA+GGG | 0.582538 | 5.2:+72714696 | MS.gene98565:CDS |
TCACCAGTGAATGCTGCGTA+AGG | 0.584490 | 5.2:-72714673 | None:intergenic |
GTCAAATTTGAGAAAGATGG+AGG | 0.586640 | 5.2:+72713428 | MS.gene98565:CDS |
GGCTACAAGGCCAGATACGA+CGG | 0.588972 | 5.2:-72717194 | None:intergenic |
CTACTTTAGAACCAACAAAG+AGG | 0.590391 | 5.2:+72717081 | MS.gene98565:CDS |
GTTCTGCCTTACAAATGATG+TGG | 0.591145 | 5.2:+72716223 | MS.gene98565:CDS |
GCCGGGTACTTGGCTTGCTG+TGG | 0.591377 | 5.2:-72717230 | None:intergenic |
TTTGAAGGCTGAAGGTCTAG+TGG | 0.592102 | 5.2:-72713099 | None:intergenic |
TGCTGTGGCGAAGGAAACAC+CGG | 0.593416 | 5.2:-72717215 | None:intergenic |
GCCACAGCAAGCCAAGTACC+CGG | 0.597454 | 5.2:+72717229 | MS.gene98565:CDS |
TTTGATCCCAACTTCAAACA+AGG | 0.601868 | 5.2:+72714745 | MS.gene98565:CDS |
GAACGAGAGAAATATCATGT+TGG | 0.602064 | 5.2:+72714228 | MS.gene98565:CDS |
TACGCAGCATTCACTGGTGA+AGG | 0.602981 | 5.2:+72714676 | MS.gene98565:CDS |
ACTCTTGGCCTTACGGGAGT+AGG | 0.605219 | 5.2:+72714309 | MS.gene98565:CDS |
TGTAAATACCTACTCCCGTA+AGG | 0.605382 | 5.2:-72714317 | None:intergenic |
GCAGCAGAGGCACTAGGTGA+GGG | 0.608379 | 5.2:+72716180 | MS.gene98565:CDS |
TTTGTGTCATGAATGGCGCT+TGG | 0.609130 | 5.2:-72716000 | None:intergenic |
GCAACGGCATAGAAAGTCAC+AGG | 0.609441 | 5.2:-72717556 | None:intergenic |
GGTTCTTGCAATGGATAAGG+AGG | 0.610176 | 5.2:+72716137 | MS.gene98565:CDS |
AGGCTGAAGGTCTAGTGGCA+AGG | 0.613015 | 5.2:-72713094 | None:intergenic |
CACTGGCAGGTGAAACCGAT+AGG | 0.613392 | 5.2:+72715791 | MS.gene98565:intron |
CTAGTGGCAAGGACTTTGAG+AGG | 0.614051 | 5.2:-72713083 | None:intergenic |
AACCCAAGAAGAAGTTTCAG+TGG | 0.615748 | 5.2:-72717415 | None:intergenic |
TTGGAAATGGTGAATGAACA+TGG | 0.615998 | 5.2:+72711633 | MS.gene98565:CDS |
CACTAGGTGAGGGTAAACCT+TGG | 0.620947 | 5.2:+72716190 | MS.gene98565:CDS |
CTGTTGAAGGCATTAATGGA+AGG | 0.622613 | 5.2:+72714649 | MS.gene98565:CDS |
TCTATCAACAATTGTTGACA+TGG | 0.630580 | 5.2:-72711370 | None:intergenic |
GCAGCATTCACTGGTGAAGG+TGG | 0.632950 | 5.2:+72714679 | MS.gene98565:CDS |
GCAGAACCAGCAATCTGCCA+AGG | 0.638622 | 5.2:-72716207 | None:intergenic |
CTTGATGCTGCAAAATGCAA+TGG | 0.650139 | 5.2:-72711663 | None:intergenic |
GCCAAATTAAGGCATACTCG+TGG | 0.653602 | 5.2:+72713377 | MS.gene98565:intron |
ATTCTTCACACCGCTATCCG+AGG | 0.655802 | 5.2:+72711885 | MS.gene98565:CDS |
TTCTGCCTTACAAATGATGT+GGG | 0.657635 | 5.2:+72716224 | MS.gene98565:CDS |
GATAAGCGAAGAAATGGCAA+AGG | 0.668284 | 5.2:-72717305 | None:intergenic |
GTATAGAGGGAATTGTGCAA+CGG | 0.675406 | 5.2:-72717572 | None:intergenic |
TTATTGGGGATAATAATGAG+AGG | 0.697139 | 5.2:+72711712 | MS.gene98565:CDS |
TGACTGGCTAAAAGACACGT+CGG | 0.732129 | 5.2:+72717162 | MS.gene98565:CDS |
ACAGCAAGCCAAGTACCCGG+CGG | 0.744284 | 5.2:+72717232 | MS.gene98565:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATT+AGG | + | chr5.2:72712152-72712171 | MS.gene98565:intron | 0.0% |
!! | TTATAAAAAAAATAAAAAAT+TGG | - | chr5.2:72715052-72715071 | None:intergenic | 0.0% |
!! | AAAAAACAAATAAAGTTATT+TGG | - | chr5.2:72713963-72713982 | None:intergenic | 10.0% |
!! | ATGTTATACAAATAAAAAAT+AGG | + | chr5.2:72714504-72714523 | MS.gene98565:intron | 10.0% |
!! | TAAAAAGAAATTATATAAAG+TGG | - | chr5.2:72713502-72713521 | None:intergenic | 10.0% |
!!! | ACATATTTAAATATTTTCAT+TGG | - | chr5.2:72716994-72717013 | None:intergenic | 10.0% |
!!! | TTGTTTTTATATAACTTAAA+AGG | - | chr5.2:72716493-72716512 | None:intergenic | 10.0% |
!!! | TTTTATTAGAAATTTGTTTT+CGG | + | chr5.2:72715692-72715711 | MS.gene98565:intron | 10.0% |
!!! | TTTTTATTTGTATAACATTT+CGG | - | chr5.2:72714502-72714521 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTACTACAAA+AGG | + | chr5.2:72714376-72714395 | MS.gene98565:intron | 10.0% |
!! | AAAATATGTAAGTGTATTAT+TGG | + | chr5.2:72711696-72711715 | MS.gene98565:CDS | 15.0% |
!! | AAATATGTAAGTGTATTATT+GGG | + | chr5.2:72711697-72711716 | MS.gene98565:CDS | 15.0% |
!! | AATATCAAATATACAAAAGT+AGG | - | chr5.2:72714421-72714440 | None:intergenic | 15.0% |
!! | AATTTATAAGTTTAGTATAG+TGG | - | chr5.2:72714983-72715002 | None:intergenic | 15.0% |
!! | ATACAAATAAAAAATAGGAT+AGG | + | chr5.2:72714509-72714528 | MS.gene98565:intron | 15.0% |
!! | ATATAGTTTATACATAAGTT+TGG | + | chr5.2:72716532-72716551 | MS.gene98565:intron | 15.0% |
!! | ATTTAATGCAAATATAAAGA+AGG | - | chr5.2:72712666-72712685 | None:intergenic | 15.0% |
!! | CATACATAAAATAAAATAGA+TGG | - | chr5.2:72714947-72714966 | None:intergenic | 15.0% |
!! | GTATATAATAGAACATTATA+GGG | - | chr5.2:72713848-72713867 | None:intergenic | 15.0% |
!! | TAAACAATTTCTTTGTAATT+AGG | - | chr5.2:72712810-72712829 | None:intergenic | 15.0% |
!! | TATAGTTTATACATAAGTTT+GGG | + | chr5.2:72716533-72716552 | MS.gene98565:intron | 15.0% |
!! | TATATATTGAACAAAGATTT+GGG | + | chr5.2:72716699-72716718 | MS.gene98565:intron | 15.0% |
!! | TTATAAGTTATGAACTAAAT+TGG | - | chr5.2:72712726-72712745 | None:intergenic | 15.0% |
!!! | AAATATATTAGCATCTTTTT+TGG | + | chr5.2:72712212-72712231 | MS.gene98565:intron | 15.0% |
!!! | ACGAAATATAATACTTTTTA+TGG | + | chr5.2:72714891-72714910 | MS.gene98565:intron | 15.0% |
!!! | ATTAGGATTATGAATTTTTT+TGG | + | chr5.2:72712169-72712188 | MS.gene98565:intron | 15.0% |
!!! | CATCTATTTTATTTTATGTA+TGG | + | chr5.2:72714945-72714964 | MS.gene98565:intron | 15.0% |
!!! | CTATATTTTTATATATATCG+TGG | + | chr5.2:72712841-72712860 | MS.gene98565:intron | 15.0% |
!!! | CTTTTCAATATAATATGTTA+TGG | + | chr5.2:72712987-72713006 | MS.gene98565:intron | 15.0% |
!!! | GATTCTTTTTTCTTTTTTTT+TGG | + | chr5.2:72714852-72714871 | MS.gene98565:intron | 15.0% |
!!! | TATAACTTGTCTTTTTTTTT+TGG | + | chr5.2:72711932-72711951 | MS.gene98565:intron | 15.0% |
!!! | TTTAACACATAATAATTTTG+AGG | + | chr5.2:72711608-72711627 | MS.gene98565:CDS | 15.0% |
!!! | TTTTATTTGTATAACATTTC+GGG | - | chr5.2:72714501-72714520 | None:intergenic | 15.0% |
!!! | TTTTCGGTAATATTTTATTT+GGG | + | chr5.2:72715708-72715727 | MS.gene98565:intron | 15.0% |
!! | AAAATCTTCATAACAACTTA+CGG | + | chr5.2:72716458-72716477 | MS.gene98565:intron | 20.0% |
!! | AAACATAAGTTATATATGCA+AGG | - | chr5.2:72712034-72712053 | None:intergenic | 20.0% |
!! | AACATAATTATCGTTGTAAA+CGG | - | chr5.2:72715638-72715657 | None:intergenic | 20.0% |
!! | AATAAAAAATAGGATAGGAT+AGG | + | chr5.2:72714514-72714533 | MS.gene98565:intron | 20.0% |
!! | AATATGTAAGTGTATTATTG+GGG | + | chr5.2:72711698-72711717 | MS.gene98565:CDS | 20.0% |
!! | ATAGTTTATACATAAGTTTG+GGG | + | chr5.2:72716534-72716553 | MS.gene98565:intron | 20.0% |
!! | ATATATAGTTCTTTCACATT+AGG | + | chr5.2:72712384-72712403 | MS.gene98565:intron | 20.0% |
!! | GGTATATAATAGAACATTAT+AGG | - | chr5.2:72713849-72713868 | None:intergenic | 20.0% |
!! | GTATATATTGAACAAAGATT+TGG | + | chr5.2:72716698-72716717 | MS.gene98565:intron | 20.0% |
!! | TAAAAAATCGTTAACTTCTT+CGG | - | chr5.2:72711424-72711443 | None:intergenic | 20.0% |
!! | TATATAGTTCTTTCACATTA+GGG | + | chr5.2:72712385-72712404 | MS.gene98565:intron | 20.0% |
!! | TATCAAAACTATCAATTTCA+TGG | + | chr5.2:72715004-72715023 | MS.gene98565:intron | 20.0% |
!! | TATTTACTCCATTATTTGTT+AGG | + | chr5.2:72716771-72716790 | MS.gene98565:intron | 20.0% |
!! | TGTTCTTCTTTAAATGTAAA+TGG | - | chr5.2:72714007-72714026 | None:intergenic | 20.0% |
!! | TTAATTAGTGAGATAAAGTT+AGG | - | chr5.2:72713798-72713817 | None:intergenic | 20.0% |
!!! | AAATATGAAATTGTGTTTTG+AGG | - | chr5.2:72715207-72715226 | None:intergenic | 20.0% |
!!! | AACTTTATTTGTTTTTTGTC+AGG | + | chr5.2:72713966-72713985 | MS.gene98565:intron | 20.0% |
!!! | ACAAAATCGACTTAAAATTA+TGG | - | chr5.2:72717510-72717529 | None:intergenic | 20.0% |
!!! | ACAATACTCAAACTTTTATT+TGG | - | chr5.2:72716948-72716967 | None:intergenic | 20.0% |
!!! | AGAAAGGTTTCATAATTTTT+TGG | - | chr5.2:72714261-72714280 | None:intergenic | 20.0% |
!!! | CAATACTCAAACTTTTATTT+GGG | - | chr5.2:72716947-72716966 | None:intergenic | 20.0% |
!!! | GCTTTTTCTTTTTTTTATCT+TGG | + | chr5.2:72717024-72717043 | MS.gene98565:intron | 20.0% |
!!! | GTTTTCGGTAATATTTTATT+TGG | + | chr5.2:72715707-72715726 | MS.gene98565:intron | 20.0% |
!!! | TAACAAATAATGGAGTAAAT+AGG | - | chr5.2:72716772-72716791 | None:intergenic | 20.0% |
!!! | TCTTTTTTTTTGGTAAACTA+AGG | + | chr5.2:72714862-72714881 | MS.gene98565:intron | 20.0% |
!!! | TTAGTAAAACTTTTGCTTTA+TGG | - | chr5.2:72716831-72716850 | None:intergenic | 20.0% |
!!! | TTTGGGATTCATTTTTATTA+AGG | - | chr5.2:72716930-72716949 | None:intergenic | 20.0% |
! | AAAAAATCGTTAACTTCTTC+GGG | - | chr5.2:72711423-72711442 | None:intergenic | 25.0% |
! | AAAAAATGGAATAGTTGAAC+TGG | + | chr5.2:72715954-72715973 | MS.gene98565:CDS | 25.0% |
! | AAATGATGTGGGATATAAAA+TGG | + | chr5.2:72716235-72716254 | MS.gene98565:CDS | 25.0% |
! | AACAAAACCTGAATATGAAA+AGG | + | chr5.2:72715891-72715910 | MS.gene98565:CDS | 25.0% |
! | AACTCCAAATAAAACAATGA+TGG | + | chr5.2:72715867-72715886 | MS.gene98565:CDS | 25.0% |
! | AATATGTTATGGAACAGATT+TGG | + | chr5.2:72712998-72713017 | MS.gene98565:intron | 25.0% |
! | ACAATTCAGTAAATACTCTA+TGG | - | chr5.2:72714349-72714368 | None:intergenic | 25.0% |
! | ACATAAAGAAAGTCAGATAA+AGG | + | chr5.2:72715834-72715853 | MS.gene98565:CDS | 25.0% |
! | ACTTAAATAAACTGCCTTAA+TGG | - | chr5.2:72715462-72715481 | None:intergenic | 25.0% |
! | ATACACAATCTTCCTAATTT+GGG | + | chr5.2:72716661-72716680 | MS.gene98565:intron | 25.0% |
! | ATATATATCGTGGATCAAAT+AGG | + | chr5.2:72712851-72712870 | MS.gene98565:intron | 25.0% |
! | ATGAGTCTTAAAAATGAACA+TGG | + | chr5.2:72711744-72711763 | MS.gene98565:CDS | 25.0% |
! | ATTACAAGATCAAAGTATAG+AGG | - | chr5.2:72717589-72717608 | None:intergenic | 25.0% |
! | ATTCTTCACCTAACAAATAA+TGG | - | chr5.2:72716782-72716801 | None:intergenic | 25.0% |
! | ATTGAAAACGAGAATGATTA+AGG | + | chr5.2:72716086-72716105 | MS.gene98565:CDS | 25.0% |
! | CATAATATATGTAAGATCTG+AGG | - | chr5.2:72711976-72711995 | None:intergenic | 25.0% |
! | CATTTAAAGAAGAACAAACA+AGG | + | chr5.2:72714011-72714030 | MS.gene98565:intron | 25.0% |
! | CCATTTATTTAAAGAGTTGA+AGG | + | chr5.2:72714585-72714604 | MS.gene98565:intron | 25.0% |
! | CCTTCAACTCTTTAAATAAA+TGG | - | chr5.2:72714588-72714607 | None:intergenic | 25.0% |
! | CTTAAATAAACTGCCTTAAT+GGG | - | chr5.2:72715461-72715480 | None:intergenic | 25.0% |
! | CTTGTTTGTTCTTCTTTAAA+AGG | - | chr5.2:72714013-72714032 | None:intergenic | 25.0% |
! | GTAAAATTTATGTGTGTCTA+CGG | - | chr5.2:72715250-72715269 | None:intergenic | 25.0% |
! | TAAGTTATGAACTAAATTGG+TGG | - | chr5.2:72712723-72712742 | None:intergenic | 25.0% |
! | TAATAACCAAGGTTACAAAA+AGG | - | chr5.2:72713685-72713704 | None:intergenic | 25.0% |
! | TATAAAGTGGTATAGTTATC+TGG | - | chr5.2:72713489-72713508 | None:intergenic | 25.0% |
! | TATACACAATCTTCCTAATT+TGG | + | chr5.2:72716660-72716679 | MS.gene98565:intron | 25.0% |
! | TCTATACTTTGATCTTGTAA+TGG | + | chr5.2:72717588-72717607 | MS.gene98565:CDS | 25.0% |
! | TGAAACAAATAATGAAGCAA+TGG | - | chr5.2:72717458-72717477 | None:intergenic | 25.0% |
! | TGATACATCATCATAGATAT+TGG | + | chr5.2:72713600-72713619 | MS.gene98565:intron | 25.0% |
! | TTAAATAAACTGCCTTAATG+GGG | - | chr5.2:72715460-72715479 | None:intergenic | 25.0% |
! | TTAAGTACTTTAACACAACT+TGG | + | chr5.2:72715476-72715495 | MS.gene98565:intron | 25.0% |
! | TTACAAGATCAAAGTATAGA+GGG | - | chr5.2:72717588-72717607 | None:intergenic | 25.0% |
! | TTGTTCGTTCTTCTTTAATT+TGG | - | chr5.2:72714124-72714143 | None:intergenic | 25.0% |
! | TTTCAATGTCTCAACAATAA+GGG | - | chr5.2:72716073-72716092 | None:intergenic | 25.0% |
!! | ATATATACCTTGTTTGAAGT+TGG | - | chr5.2:72714755-72714774 | None:intergenic | 25.0% |
!! | ATTTGTTTGTTGCCAAATTA+AGG | + | chr5.2:72713366-72713385 | MS.gene98565:intron | 25.0% |
!! | CTTAAGTTATTGTCCTTTTA+AGG | - | chr5.2:72713628-72713647 | None:intergenic | 25.0% |
!! | GAAAATGCTTAACTTTTACA+AGG | - | chr5.2:72715161-72715180 | None:intergenic | 25.0% |
!! | TATATACCTTGTTTGAAGTT+GGG | - | chr5.2:72714754-72714773 | None:intergenic | 25.0% |
!! | TGGAAAATCCAAATTTTTCA+AGG | - | chr5.2:72715112-72715131 | None:intergenic | 25.0% |
!! | TTTTCAATGTCTCAACAATA+AGG | - | chr5.2:72716074-72716093 | None:intergenic | 25.0% |
!!! | AACTTGTCTTTTTTTTTTGG+TGG | + | chr5.2:72711935-72711954 | MS.gene98565:intron | 25.0% |
!!! | ACATAATAATTTTGAGGCAT+TGG | + | chr5.2:72711614-72711633 | MS.gene98565:CDS | 25.0% |
!!! | AGAGTGTCTTTCAATATTTT+TGG | + | chr5.2:72715560-72715579 | MS.gene98565:intron | 25.0% |
!!! | ATAGATATTGGTTCCTTAAA+AGG | + | chr5.2:72713612-72713631 | MS.gene98565:intron | 25.0% |
!!! | ATTTTTTCTTCTTCGAAACA+TGG | - | chr5.2:72713870-72713889 | None:intergenic | 25.0% |
!!! | GATGGATTAAAAATAGCTTA+GGG | - | chr5.2:72712758-72712777 | None:intergenic | 25.0% |
!!! | GGAAAATCCAAATTTTTCAA+GGG | - | chr5.2:72715111-72715130 | None:intergenic | 25.0% |
!!! | GTTTCCATCATTGTTTTATT+TGG | - | chr5.2:72715874-72715893 | None:intergenic | 25.0% |
!!! | TGATGGATTAAAAATAGCTT+AGG | - | chr5.2:72712759-72712778 | None:intergenic | 25.0% |
!!! | TTATGAATTTTTTTGGCACT+AGG | + | chr5.2:72712176-72712195 | MS.gene98565:intron | 25.0% |
!!! | TTGTTTTTTGTCAGGAAAAA+TGG | + | chr5.2:72713974-72713993 | MS.gene98565:intron | 25.0% |
!!! | TTTTTTAAGTGAGTACACAT+TGG | + | chr5.2:72711437-72711456 | MS.gene98565:CDS | 25.0% |
AAAAATAGGATAGGATAGGA+TGG | + | chr5.2:72714518-72714537 | MS.gene98565:intron | 30.0% | |
AAACAAGTTGTTGCGTAAAT+TGG | - | chr5.2:72717535-72717554 | None:intergenic | 30.0% | |
AAAGGAAGAAGTTGACAAAA+AGG | + | chr5.2:72715909-72715928 | MS.gene98565:CDS | 30.0% | |
AACAAGTTGTTGCGTAAATT+GGG | - | chr5.2:72717534-72717553 | None:intergenic | 30.0% | |
AAGAGCAATGTTATATCTCT+AGG | - | chr5.2:72712617-72712636 | None:intergenic | 30.0% | |
AGGAGAATTAATGATAGTTC+AGG | - | chr5.2:72712790-72712809 | None:intergenic | 30.0% | |
AGTTCATGGGAAAATATGAT+TGG | - | chr5.2:72715132-72715151 | None:intergenic | 30.0% | |
ATATTGAACAAAGATTTGGG+AGG | + | chr5.2:72716702-72716721 | MS.gene98565:intron | 30.0% | |
ATCTTGCTCATATTTCCAAA+GGG | + | chr5.2:72711820-72711839 | MS.gene98565:CDS | 30.0% | |
ATTACATGTAGCCATAGATT+TGG | + | chr5.2:72711548-72711567 | MS.gene98565:CDS | 30.0% | |
ATTTACCGAAATATTCTCCT+CGG | - | chr5.2:72711905-72711924 | None:intergenic | 30.0% | |
GAAGTCAAATTTGAGAAAGA+TGG | + | chr5.2:72713425-72713444 | MS.gene98565:CDS | 30.0% | |
GATTGTTCCCTTGAAAAATT+TGG | + | chr5.2:72715101-72715120 | MS.gene98565:intron | 30.0% | |
GGAGAATACAATATTGCATT+TGG | + | chr5.2:72716158-72716177 | MS.gene98565:CDS | 30.0% | |
GGAGAATTAATGATAGTTCA+GGG | - | chr5.2:72712789-72712808 | None:intergenic | 30.0% | |
TAATTAGAGTGCAAGAGAAT+GGG | - | chr5.2:72712961-72712980 | None:intergenic | 30.0% | |
TACAAGGATTCAAAGTTCAT+GGG | - | chr5.2:72715145-72715164 | None:intergenic | 30.0% | |
TATATCCCACATCATTTGTA+AGG | - | chr5.2:72716232-72716251 | None:intergenic | 30.0% | |
TATCTTGCTCATATTTCCAA+AGG | + | chr5.2:72711819-72711838 | MS.gene98565:CDS | 30.0% | |
TATTGAACAAAGATTTGGGA+GGG | + | chr5.2:72716703-72716722 | MS.gene98565:intron | 30.0% | |
TGACTTTGCATTATGTTGTA+CGG | - | chr5.2:72713746-72713765 | None:intergenic | 30.0% | |
TGGAAGAAATTGAGAACTTT+GGG | + | chr5.2:72716604-72716623 | MS.gene98565:intron | 30.0% | |
TTAAAAAAGGAAGGATGAAG+TGG | + | chr5.2:72716584-72716603 | MS.gene98565:intron | 30.0% | |
TTAATTAGAGTGCAAGAGAA+TGG | - | chr5.2:72712962-72712981 | None:intergenic | 30.0% | |
TTACAAGGATTCAAAGTTCA+TGG | - | chr5.2:72715146-72715165 | None:intergenic | 30.0% | |
TTATTGGGGATAATAATGAG+AGG | + | chr5.2:72711712-72711731 | MS.gene98565:CDS | 30.0% | |
TTATTTGTTTCATTCTGCAG+TGG | + | chr5.2:72717466-72717485 | MS.gene98565:CDS | 30.0% | |
TTCAATGTCTCAACAATAAG+GGG | - | chr5.2:72716072-72716091 | None:intergenic | 30.0% | |
! | ACTTCTTCCTTTTCATATTC+AGG | - | chr5.2:72715901-72715920 | None:intergenic | 30.0% |
! | TAATTGTGTGTGTGAGTTTT+CGG | + | chr5.2:72712313-72712332 | MS.gene98565:intron | 30.0% |
! | TATTATTTACCCGTGAGTTT+TGG | + | chr5.2:72713700-72713719 | MS.gene98565:intron | 30.0% |
! | TGATATTTTTCCCTCTTTGT+TGG | - | chr5.2:72717095-72717114 | None:intergenic | 30.0% |
! | TTTTCCAAGCTGCTATTAAT+TGG | + | chr5.2:72711778-72711797 | MS.gene98565:CDS | 30.0% |
!! | AGAAGAACTTTGGAATAACT+TGG | + | chr5.2:72716116-72716135 | MS.gene98565:CDS | 30.0% |
!! | ATGTCGGATTGACTTATTTT+AGG | + | chr5.2:72716367-72716386 | MS.gene98565:intron | 30.0% |
!! | TACTTTAGAACCAACAAAGA+GGG | + | chr5.2:72717082-72717101 | MS.gene98565:CDS | 30.0% |
!! | TGCTCTGATTCATTTGTTTT+AGG | + | chr5.2:72712413-72712432 | MS.gene98565:intron | 30.0% |
!!! | AGAATTTTTCAAGACACATG+TGG | + | chr5.2:72712467-72712486 | MS.gene98565:intron | 30.0% |
!!! | AGGATGGTTTTAAAAAAGGA+AGG | + | chr5.2:72716575-72716594 | MS.gene98565:intron | 30.0% |
!!! | ATTGTGTTTTGAGGACATTA+TGG | - | chr5.2:72715198-72715217 | None:intergenic | 30.0% |
!!! | GGTTTTTTTGTGTCATTTGA+TGG | - | chr5.2:72714047-72714066 | None:intergenic | 30.0% |
!!! | TAATTTTGAGGCATTGGAAA+TGG | + | chr5.2:72711620-72711639 | MS.gene98565:CDS | 30.0% |
!!! | TATTTTAACCAAGGTTCCAA+CGG | + | chr5.2:72717612-72717631 | MS.gene98565:CDS | 30.0% |
!!! | TGTAATGGCTATTTTAACCA+AGG | + | chr5.2:72717603-72717622 | MS.gene98565:CDS | 30.0% |
!!! | TTGTCTTTTTTTTTTGGTGG+TGG | + | chr5.2:72711938-72711957 | MS.gene98565:intron | 30.0% |
!!! | TTGTGTTTTGAGGACATTAT+GGG | - | chr5.2:72715197-72715216 | None:intergenic | 30.0% |
!!! | TTTTTGGTTGCAGCAAAAAA+TGG | + | chr5.2:72715940-72715959 | MS.gene98565:CDS | 30.0% |
!!! | TTTTTTGCTGCAACCAAAAA+TGG | - | chr5.2:72715940-72715959 | None:intergenic | 30.0% |
AAAGTTCAAGCAACCTTTCA+TGG | + | chr5.2:72713120-72713139 | MS.gene98565:CDS | 35.0% | |
AACTTTAACGATGTGTGTCA+CGG | + | chr5.2:72713923-72713942 | MS.gene98565:intron | 35.0% | |
AAGAAATTGAGAACTTTGGG+AGG | + | chr5.2:72716607-72716626 | MS.gene98565:intron | 35.0% | |
ACAACTTGGTTGCAATATCA+AGG | + | chr5.2:72715490-72715509 | MS.gene98565:intron | 35.0% | |
ACAATTCAAATATTCCCGCA+TGG | + | chr5.2:72715600-72715619 | MS.gene98565:intron | 35.0% | |
ACACACATCGTTAAAGTTGT+TGG | - | chr5.2:72713921-72713940 | None:intergenic | 35.0% | |
ACCAATAAAAACCGTACTGA+TGG | - | chr5.2:72713544-72713563 | None:intergenic | 35.0% | |
AGACTTGACAAACTCAAGAA+AGG | - | chr5.2:72714277-72714296 | None:intergenic | 35.0% | |
AGGACTCAAAAGAAGAACTT+TGG | + | chr5.2:72716106-72716125 | MS.gene98565:CDS | 35.0% | |
AGTACACATTGGAAGGTAAA+TGG | + | chr5.2:72711448-72711467 | MS.gene98565:CDS | 35.0% | |
ATCTTCTTCGTCCAAATCTA+TGG | - | chr5.2:72711562-72711581 | None:intergenic | 35.0% | |
ATGAGTACTTACAGTGGTAT+AGG | - | chr5.2:72713157-72713176 | None:intergenic | 35.0% | |
CAAATCTCGACGAAAATCTT+TGG | - | chr5.2:72717395-72717414 | None:intergenic | 35.0% | |
CAACTTGGTTGCAATATCAA+GGG | + | chr5.2:72715491-72715510 | MS.gene98565:intron | 35.0% | |
CGTTAAAGTTGTTGGATTCT+AGG | - | chr5.2:72713913-72713932 | None:intergenic | 35.0% | |
CTATCGACATAACATTTGTG+AGG | + | chr5.2:72716394-72716413 | MS.gene98565:intron | 35.0% | |
CTTGACGATTTCAAACATGT+TGG | + | chr5.2:72715426-72715445 | MS.gene98565:intron | 35.0% | |
GAACGAGAGAAATATCATGT+TGG | + | chr5.2:72714228-72714247 | MS.gene98565:CDS | 35.0% | |
GAGATTCTAGATTCGAACTT+GGG | - | chr5.2:72712292-72712311 | None:intergenic | 35.0% | |
GGATTCGTTTATACCATGAA+AGG | - | chr5.2:72713136-72713155 | None:intergenic | 35.0% | |
GTACACATTGGAAGGTAAAT+GGG | + | chr5.2:72711449-72711468 | MS.gene98565:CDS | 35.0% | |
GTATGTATGAGTACTTACAG+TGG | - | chr5.2:72713163-72713182 | None:intergenic | 35.0% | |
GTCAAATTTGAGAAAGATGG+AGG | + | chr5.2:72713428-72713447 | MS.gene98565:CDS | 35.0% | |
GTCAGATTTGTATGTGTTTG+AGG | - | chr5.2:72715331-72715350 | None:intergenic | 35.0% | |
GTGGAAGAAATTGAGAACTT+TGG | + | chr5.2:72716603-72716622 | MS.gene98565:intron | 35.0% | |
GTGGGATATAAAATGGTTTC+AGG | + | chr5.2:72716242-72716261 | MS.gene98565:CDS | 35.0% | |
TAGTTCTTTCACATTAGGGA+TGG | + | chr5.2:72712389-72712408 | MS.gene98565:intron | 35.0% | |
TATATGAGCACATCTTGCAA+GGG | + | chr5.2:72715273-72715292 | MS.gene98565:intron | 35.0% | |
TATGTCATATGCCATCAGTA+CGG | + | chr5.2:72713530-72713549 | MS.gene98565:intron | 35.0% | |
TATGTGTTTGAGGACGATTA+GGG | - | chr5.2:72715321-72715340 | None:intergenic | 35.0% | |
TCACGGGTAAATAATAACCA+AGG | - | chr5.2:72713696-72713715 | None:intergenic | 35.0% | |
TCGTTCTTGTTCTTTCTTCT+GGG | - | chr5.2:72714214-72714233 | None:intergenic | 35.0% | |
TTAAGTGAGTACACATTGGA+AGG | + | chr5.2:72711441-72711460 | MS.gene98565:CDS | 35.0% | |
TTAATAGCAGCTTGGAAAAG+AGG | - | chr5.2:72711777-72711796 | None:intergenic | 35.0% | |
TTATAAAAGACAGCAGTGAC+TGG | + | chr5.2:72717146-72717165 | MS.gene98565:CDS | 35.0% | |
TTATATGAGCACATCTTGCA+AGG | + | chr5.2:72715272-72715291 | MS.gene98565:intron | 35.0% | |
TTCGAGAAGTGAGAATTGAA+AGG | - | chr5.2:72717366-72717385 | None:intergenic | 35.0% | |
TTCTCCAATTAATAGCAGCT+TGG | - | chr5.2:72711785-72711804 | None:intergenic | 35.0% | |
TTCTGCCTTACAAATGATGT+GGG | + | chr5.2:72716224-72716243 | MS.gene98565:CDS | 35.0% | |
TTCTTGTTCATCGAACCTAT+CGG | - | chr5.2:72715809-72715828 | None:intergenic | 35.0% | |
TTGGAAATGGTGAATGAACA+TGG | + | chr5.2:72711633-72711652 | MS.gene98565:CDS | 35.0% | |
TTTGATCCCAACTTCAAACA+AGG | + | chr5.2:72714745-72714764 | MS.gene98565:CDS | 35.0% | |
! | AAGGTTGCTTGAACTTTTGA+AGG | - | chr5.2:72713117-72713136 | None:intergenic | 35.0% |
! | ACATAAGTTTGGGGTACTTT+GGG | + | chr5.2:72716543-72716562 | MS.gene98565:intron | 35.0% |
! | AGAAATTGAGAACTTTGGGA+GGG | + | chr5.2:72716608-72716627 | MS.gene98565:intron | 35.0% |
! | ATCTTGTTTGATGGATCTTC+TGG | - | chr5.2:72714150-72714169 | None:intergenic | 35.0% |
! | ATTGCATTTTGCAGCATCAA+GGG | + | chr5.2:72711665-72711684 | MS.gene98565:CDS | 35.0% |
! | CAAAAAGGAGACACCATTTT+TGG | + | chr5.2:72715924-72715943 | MS.gene98565:CDS | 35.0% |
! | CAAAAGCCTTTTTGTAACCT+TGG | + | chr5.2:72713676-72713695 | MS.gene98565:intron | 35.0% |
! | CATGTTGAGGATGTTTTTCT+TGG | - | chr5.2:72715398-72715417 | None:intergenic | 35.0% |
! | CTTTGAGTTTGTGTCATGAA+TGG | - | chr5.2:72716010-72716029 | None:intergenic | 35.0% |
! | GAATAACTTGGTTCTTGCAA+TGG | + | chr5.2:72716128-72716147 | MS.gene98565:CDS | 35.0% |
! | GATCATTTGATGGATCTTCT+GGG | - | chr5.2:72714092-72714111 | None:intergenic | 35.0% |
! | TACATAAGTTTGGGGTACTT+TGG | + | chr5.2:72716542-72716561 | MS.gene98565:intron | 35.0% |
! | TAGTTCAGGGATTAACTTGA+TGG | - | chr5.2:72712776-72712795 | None:intergenic | 35.0% |
! | TCTTGTTTGATGGATCTTCT+GGG | - | chr5.2:72714149-72714168 | None:intergenic | 35.0% |
! | TTCTTCTGGATCTTGTTTGA+TGG | - | chr5.2:72714159-72714178 | None:intergenic | 35.0% |
! | TTTGCCATTTCTTCGCTTAT+CGG | + | chr5.2:72717307-72717326 | MS.gene98565:CDS | 35.0% |
!! | CTACTTTAGAACCAACAAAG+AGG | + | chr5.2:72717081-72717100 | MS.gene98565:CDS | 35.0% |
!! | GTTCTAAAGTAGAAGTGTTG+TGG | - | chr5.2:72717073-72717092 | None:intergenic | 35.0% |
!!! | ATTGCTTTTTCATGATCCAG+GGG | - | chr5.2:72713405-72713424 | None:intergenic | 35.0% |
!!! | CATTGCTTTTTCATGATCCA+GGG | - | chr5.2:72713406-72713425 | None:intergenic | 35.0% |
!!! | CTGAGTTTTGTTCTTTCTTC+TGG | - | chr5.2:72714173-72714192 | None:intergenic | 35.0% |
!!! | GGAGAGGATGGTTTTAAAAA+AGG | + | chr5.2:72716571-72716590 | MS.gene98565:intron | 35.0% |
!!! | TCATTGCTTTTTCATGATCC+AGG | - | chr5.2:72713407-72713426 | None:intergenic | 35.0% |
!!! | TGTTTTATTTGGAGTTGACG+TGG | - | chr5.2:72715863-72715882 | None:intergenic | 35.0% |
!!! | TTTTTTTTTGGTGGTGGTGA+GGG | + | chr5.2:72711944-72711963 | MS.gene98565:intron | 35.0% |
!!! | TTTTTTTTTTGGTGGTGGTG+AGG | + | chr5.2:72711943-72711962 | MS.gene98565:intron | 35.0% |
AACCCAAGAAGAAGTTTCAG+TGG | - | chr5.2:72717418-72717437 | None:intergenic | 40.0% | |
AAGTCCGATAAGCGAAGAAA+TGG | - | chr5.2:72717314-72717333 | None:intergenic | 40.0% | |
AATATTGCATTTGGCAGCAG+AGG | + | chr5.2:72716167-72716186 | MS.gene98565:CDS | 40.0% | |
CAACATCTTGTACGAGATGA+TGG | + | chr5.2:72711855-72711874 | MS.gene98565:CDS | 40.0% | |
CACAATCTTCCTAATTTGGG+AGG | + | chr5.2:72716664-72716683 | MS.gene98565:intron | 40.0% | |
CGAGATTCTAGATTCGAACT+TGG | - | chr5.2:72712293-72712312 | None:intergenic | 40.0% | |
CGCGAAATGTGCTTCTTTAA+CGG | - | chr5.2:72715353-72715372 | None:intergenic | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | - | chr5.2:72712543-72712562 | None:intergenic | 40.0% | |
CTCGTTCTTGTTCTTTCTTC+TGG | - | chr5.2:72714215-72714234 | None:intergenic | 40.0% | |
CTTGATGCTGCAAAATGCAA+TGG | - | chr5.2:72711666-72711685 | None:intergenic | 40.0% | |
GAAATATTCTCCTCGGATAG+CGG | - | chr5.2:72711898-72711917 | None:intergenic | 40.0% | |
GACTGACTACGATCATTTGA+TGG | - | chr5.2:72714102-72714121 | None:intergenic | 40.0% | |
GAGATAATTGCTTTGTGAGC+TGG | - | chr5.2:72711510-72711529 | None:intergenic | 40.0% | |
GATAAGCGAAGAAATGGCAA+AGG | - | chr5.2:72717308-72717327 | None:intergenic | 40.0% | |
GCAATTATCTCTGAATCAGC+TGG | + | chr5.2:72711519-72711538 | MS.gene98565:CDS | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | - | chr5.2:72712546-72712565 | None:intergenic | 40.0% | |
GCTATCCGAGGAGAATATTT+CGG | + | chr5.2:72711897-72711916 | MS.gene98565:CDS | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | + | chr5.2:72712554-72712573 | MS.gene98565:intron | 40.0% | |
GTAGGCACTAATTTCGTCTT+CGG | - | chr5.2:72714403-72714422 | None:intergenic | 40.0% | |
GTATAGAGGGAATTGTGCAA+CGG | - | chr5.2:72717575-72717594 | None:intergenic | 40.0% | |
GTATGTGTTTGAGGACGATT+AGG | - | chr5.2:72715322-72715341 | None:intergenic | 40.0% | |
GTTCTGCCTTACAAATGATG+TGG | + | chr5.2:72716223-72716242 | MS.gene98565:CDS | 40.0% | |
TAATACTGGACTGCCTTCAT+CGG | - | chr5.2:72717263-72717282 | None:intergenic | 40.0% | |
TCAAGTTTGCATGCATGTTG+AGG | - | chr5.2:72715411-72715430 | None:intergenic | 40.0% | |
TCCACGAGTATGCCTTAATT+TGG | - | chr5.2:72713381-72713400 | None:intergenic | 40.0% | |
TCTGCATATGTACACACTCT+TGG | + | chr5.2:72714294-72714313 | MS.gene98565:CDS | 40.0% | |
TGCCACTGAAACTTCTTCTT+GGG | + | chr5.2:72717413-72717432 | MS.gene98565:CDS | 40.0% | |
TGTAAATACCTACTCCCGTA+AGG | - | chr5.2:72714320-72714339 | None:intergenic | 40.0% | |
TTAGTTGTCTACCTTCACTG+AGG | + | chr5.2:72715530-72715549 | MS.gene98565:intron | 40.0% | |
TTCAAATATTCCCGCATGGA+AGG | + | chr5.2:72715604-72715623 | MS.gene98565:intron | 40.0% | |
TTGAGGACGATTAGGGTTTA+GGG | - | chr5.2:72715314-72715333 | None:intergenic | 40.0% | |
TTGCAAAGTGACTATCCCTT+TGG | - | chr5.2:72711838-72711857 | None:intergenic | 40.0% | |
TTGCCACTGAAACTTCTTCT+TGG | + | chr5.2:72717412-72717431 | MS.gene98565:CDS | 40.0% | |
TTTGAGGACGATTAGGGTTT+AGG | - | chr5.2:72715315-72715334 | None:intergenic | 40.0% | |
! | AAATTGAGAACTTTGGGAGG+GGG | + | chr5.2:72716610-72716629 | MS.gene98565:intron | 40.0% |
! | CATTGCATTTTGCAGCATCA+AGG | + | chr5.2:72711664-72711683 | MS.gene98565:CDS | 40.0% |
! | CGATCATTTGATGGATCTTC+TGG | - | chr5.2:72714093-72714112 | None:intergenic | 40.0% |
! | CTGCAAAGAAGAAGCACATA+TGG | + | chr5.2:72714617-72714636 | MS.gene98565:CDS | 40.0% |
! | CTTGGTTCTTGCAATGGATA+AGG | + | chr5.2:72716134-72716153 | MS.gene98565:CDS | 40.0% |
! | GAAATTGAGAACTTTGGGAG+GGG | + | chr5.2:72716609-72716628 | MS.gene98565:intron | 40.0% |
! | GCCATCAGTACGGTTTTTAT+TGG | + | chr5.2:72713540-72713559 | MS.gene98565:intron | 40.0% |
! | TAAAGAAGCACATTTCGCGA+AGG | + | chr5.2:72715354-72715373 | MS.gene98565:intron | 40.0% |
! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr5.2:72712005-72712024 | None:intergenic | 40.0% |
! | TTAGGGTTTAGGGTTTCAAG+AGG | - | chr5.2:72715304-72715323 | None:intergenic | 40.0% |
! | TTGCATTTTGCAGCATCAAG+GGG | + | chr5.2:72711666-72711685 | MS.gene98565:CDS | 40.0% |
!! | AGTAGAAGTGTTGTGGTACA+AGG | - | chr5.2:72717066-72717085 | None:intergenic | 40.0% |
!! | CTGTTGAAGGCATTAATGGA+AGG | + | chr5.2:72714649-72714668 | MS.gene98565:CDS | 40.0% |
!! | CTTGAACTTTTGAAGGCTGA+AGG | - | chr5.2:72713110-72713129 | None:intergenic | 40.0% |
!! | CTTTTGAGTCCTCCCAAATT+AGG | - | chr5.2:72716676-72716695 | None:intergenic | 40.0% |
!! | GTGTCATTTGATGGATCTTC+TGG | - | chr5.2:72714038-72714057 | None:intergenic | 40.0% |
!! | TCAGCTGTTGAAGGCATTAA+TGG | + | chr5.2:72714645-72714664 | MS.gene98565:CDS | 40.0% |
!! | TTCTTCTGGGTCTTGTTTGA+TGG | - | chr5.2:72714201-72714220 | None:intergenic | 40.0% |
!! | TTTGGGGTACTTTGGGATTT+AGG | + | chr5.2:72716550-72716569 | MS.gene98565:intron | 40.0% |
AAAGATTTGGGAGGGTTTGC+AGG | + | chr5.2:72716711-72716730 | MS.gene98565:intron | 45.0% | |
AAGATTTGGGAGGGTTTGCA+GGG | + | chr5.2:72716712-72716731 | MS.gene98565:intron | 45.0% | |
AAGGTGGTCAACCAACTGAT+AGG | + | chr5.2:72714695-72714714 | MS.gene98565:CDS | 45.0% | |
AGGTGGTCAACCAACTGATA+GGG | + | chr5.2:72714696-72714715 | MS.gene98565:CDS | 45.0% | |
ATGGAGTAGTCAGCTGTTGA+AGG | + | chr5.2:72714636-72714655 | MS.gene98565:CDS | 45.0% | |
CCAACTGAGTTAAGCTCACA+AGG | + | chr5.2:72712007-72712026 | MS.gene98565:intron | 45.0% | |
CCAGTGTCAAATGCAATGGA+AGG | - | chr5.2:72715777-72715796 | None:intergenic | 45.0% | |
CCTTCCATTGCATTTGACAC+TGG | + | chr5.2:72715774-72715793 | MS.gene98565:intron | 45.0% | |
CCTTGTGAGCTTAACTCAGT+TGG | - | chr5.2:72712010-72712029 | None:intergenic | 45.0% | |
CGGATTATATGCCTTCCATG+CGG | - | chr5.2:72715618-72715637 | None:intergenic | 45.0% | |
CTTTGTTCAGATGTGTGCTG+AGG | - | chr5.2:72713052-72713071 | None:intergenic | 45.0% | |
GAAGGCAGTCCAGTATTAGA+AGG | + | chr5.2:72717265-72717284 | MS.gene98565:CDS | 45.0% | |
GCCAAATTAAGGCATACTCG+TGG | + | chr5.2:72713377-72713396 | MS.gene98565:intron | 45.0% | |
GGACTTTGCTTCTCTGTTAC+TGG | + | chr5.2:72717328-72717347 | MS.gene98565:CDS | 45.0% | |
GGATTATATGCCTTCCATGC+GGG | - | chr5.2:72715617-72715636 | None:intergenic | 45.0% | |
GGTTCTTGCAATGGATAAGG+AGG | + | chr5.2:72716137-72716156 | MS.gene98565:CDS | 45.0% | |
GTACGGTGCACATAACTGAA+GGG | - | chr5.2:72713729-72713748 | None:intergenic | 45.0% | |
GTCTACCTTCACTGAGGAAA+AGG | + | chr5.2:72715536-72715555 | MS.gene98565:intron | 45.0% | |
GTGAGCTTAACTCAGTTGGT+AGG | - | chr5.2:72712006-72712025 | None:intergenic | 45.0% | |
GTTCCAACGGCAACTGATAA+AGG | + | chr5.2:72717625-72717644 | MS.gene98565:CDS | 45.0% | |
TACGGTGCACATAACTGAAG+GGG | - | chr5.2:72713728-72713747 | None:intergenic | 45.0% | |
TCACCTTTATCAGTTGCCGT+TGG | - | chr5.2:72717631-72717650 | None:intergenic | 45.0% | |
TGAAGGGGATCCAAAACTCA+CGG | - | chr5.2:72713713-72713732 | None:intergenic | 45.0% | |
TGTACGGTGCACATAACTGA+AGG | - | chr5.2:72713730-72713749 | None:intergenic | 45.0% | |
TTGGATCACGTTCCCCATTA+AGG | + | chr5.2:72715445-72715464 | MS.gene98565:intron | 45.0% | |
TTTCGCGAAGGAAAGTTCTG+AGG | + | chr5.2:72715366-72715385 | MS.gene98565:intron | 45.0% | |
TTTGAAGGCTGAAGGTCTAG+TGG | - | chr5.2:72713102-72713121 | None:intergenic | 45.0% | |
TTTGTGTCATGAATGGCGCT+TGG | - | chr5.2:72716003-72716022 | None:intergenic | 45.0% | |
! | AATTGAGAACTTTGGGAGGG+GGG | + | chr5.2:72716611-72716630 | MS.gene98565:intron | 45.0% |
! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr5.2:72712526-72712545 | None:intergenic | 45.0% |
! | ATTGCTTTGTGAGCTGGTTC+TGG | - | chr5.2:72711504-72711523 | None:intergenic | 45.0% |
! | CGATCGATTTCCCTATCAGT+TGG | - | chr5.2:72714709-72714728 | None:intergenic | 45.0% |
! | CTCTACCTTTTCCTCAGTGA+AGG | - | chr5.2:72715544-72715563 | None:intergenic | 45.0% |
! | TGACTGGCTAAAAGACACGT+CGG | + | chr5.2:72717162-72717181 | MS.gene98565:CDS | 45.0% |
!! | CTTTGGGATTTAGGAGAGGA+TGG | + | chr5.2:72716559-72716578 | MS.gene98565:intron | 45.0% |
!! | GGTACTTTGGGATTTAGGAG+AGG | + | chr5.2:72716555-72716574 | MS.gene98565:intron | 45.0% |
!! | TGTACACACTCTTGGCCTTA+CGG | + | chr5.2:72714302-72714321 | MS.gene98565:CDS | 45.0% |
!!! | TATAATTTCTTTTTAATATT+TGG | + | chr5.2:72713507-72713526 | MS.gene98565:CDS | 5.0% |
AAGTCAATCCGACATGCGCA+TGG | - | chr5.2:72716362-72716381 | None:intergenic | 50.0% | |
AGCCACACCTCCTTGAATTG+TGG | + | chr5.2:72712533-72712552 | MS.gene98565:intron | 50.0% | |
AGTCAATCCGACATGCGCAT+GGG | - | chr5.2:72716361-72716380 | None:intergenic | 50.0% | |
ATCAGTTGCCGTTGGAACCT+TGG | - | chr5.2:72717623-72717642 | None:intergenic | 50.0% | |
ATTCTTCACACCGCTATCCG+AGG | + | chr5.2:72711885-72711904 | MS.gene98565:CDS | 50.0% | |
CACTAGGTGAGGGTAAACCT+TGG | + | chr5.2:72716190-72716209 | MS.gene98565:CDS | 50.0% | |
CCATTGCATTTGACACTGGC+AGG | + | chr5.2:72715778-72715797 | MS.gene98565:intron | 50.0% | |
CCTGCCAGTGTCAAATGCAA+TGG | - | chr5.2:72715781-72715800 | None:intergenic | 50.0% | |
CTAGTGGCAAGGACTTTGAG+AGG | - | chr5.2:72713086-72713105 | None:intergenic | 50.0% | |
CTTAAACCCCATGCGCATGT+CGG | + | chr5.2:72716351-72716370 | MS.gene98565:intron | 50.0% | |
GAAGGGGATCCAAAACTCAC+GGG | - | chr5.2:72713712-72713731 | None:intergenic | 50.0% | |
GCAACGGCATAGAAAGTCAC+AGG | - | chr5.2:72717559-72717578 | None:intergenic | 50.0% | |
GCAGGCTTGCCTTCTAATAC+TGG | - | chr5.2:72717277-72717296 | None:intergenic | 50.0% | |
GGTAAACCTTGGCAGATTGC+TGG | + | chr5.2:72716201-72716220 | MS.gene98565:CDS | 50.0% | |
TACGCAGCATTCACTGGTGA+AGG | + | chr5.2:72714676-72714695 | MS.gene98565:CDS | 50.0% | |
TCACCAGTGAATGCTGCGTA+AGG | - | chr5.2:72714676-72714695 | None:intergenic | 50.0% | |
TGCCACAATTCAAGGAGGTG+TGG | - | chr5.2:72712538-72712557 | None:intergenic | 50.0% | |
!! | ATGGCAAAGGCATCGAATGC+AGG | - | chr5.2:72717295-72717314 | None:intergenic | 50.0% |
!! | GTACACACTCTTGGCCTTAC+GGG | + | chr5.2:72714303-72714322 | MS.gene98565:CDS | 50.0% |
AGGCTGAAGGTCTAGTGGCA+AGG | - | chr5.2:72713097-72713116 | None:intergenic | 55.0% | |
CACTGGCAGGTGAAACCGAT+AGG | + | chr5.2:72715791-72715810 | MS.gene98565:intron | 55.0% | |
GAATCCTGCTCCGTCGTATC+TGG | + | chr5.2:72717184-72717203 | MS.gene98565:CDS | 55.0% | |
GCAGAACCAGCAATCTGCCA+AGG | - | chr5.2:72716210-72716229 | None:intergenic | 55.0% | |
GCAGCATTCACTGGTGAAGG+TGG | + | chr5.2:72714679-72714698 | MS.gene98565:CDS | 55.0% | |
GGACCTTACGCAGCATTCAC+TGG | + | chr5.2:72714670-72714689 | MS.gene98565:CDS | 55.0% | |
GGCTACAAGGCCAGATACGA+CGG | - | chr5.2:72717197-72717216 | None:intergenic | 55.0% | |
GTCAATCCGACATGCGCATG+GGG | - | chr5.2:72716360-72716379 | None:intergenic | 55.0% | |
TGCTGTGGCGAAGGAAACAC+CGG | - | chr5.2:72717218-72717237 | None:intergenic | 55.0% | |
TTGGGAGGGTTTGCAGGGAT+TGG | + | chr5.2:72716717-72716736 | MS.gene98565:intron | 55.0% | |
! | CGAAGGAAACACCGGCTACA+AGG | - | chr5.2:72717210-72717229 | None:intergenic | 55.0% |
!! | ACTCTTGGCCTTACGGGAGT+AGG | + | chr5.2:72714309-72714328 | MS.gene98565:CDS | 55.0% |
!! | CATTTGGCAGCAGAGGCACT+AGG | + | chr5.2:72716174-72716193 | MS.gene98565:CDS | 55.0% |
!! | GTCGTATCTGGCCTTGTAGC+CGG | + | chr5.2:72717196-72717215 | MS.gene98565:CDS | 55.0% |
!! | TACTTGGCTTGCTGTGGCGA+AGG | - | chr5.2:72717227-72717246 | None:intergenic | 55.0% |
AAGGCCAGATACGACGGAGC+AGG | - | chr5.2:72717191-72717210 | None:intergenic | 60.0% | |
ACAGCAAGCCAAGTACCCGG+CGG | + | chr5.2:72717232-72717251 | MS.gene98565:CDS | 60.0% | |
AGGCATACTCGTGGAACCCC+TGG | + | chr5.2:72713386-72713405 | MS.gene98565:intron | 60.0% | |
GCCACAGCAAGCCAAGTACC+CGG | + | chr5.2:72717229-72717248 | MS.gene98565:CDS | 60.0% | |
! | ACTTTGGGAGGGGGGAGCTT+TGG | + | chr5.2:72716619-72716638 | MS.gene98565:intron | 60.0% |
! | CTTTGGGAGGGGGGAGCTTT+GGG | + | chr5.2:72716620-72716639 | MS.gene98565:intron | 60.0% |
!! | GCAGCAGAGGCACTAGGTGA+GGG | + | chr5.2:72716180-72716199 | MS.gene98565:CDS | 60.0% |
! | CCTTCATCGGTTGTGCCGCC+GGG | - | chr5.2:72717250-72717269 | None:intergenic | 65.0% |
! | GCCTTCATCGGTTGTGCCGC+CGG | - | chr5.2:72717251-72717270 | None:intergenic | 65.0% |
!! | GCCGGGTACTTGGCTTGCTG+TGG | - | chr5.2:72717233-72717252 | None:intergenic | 65.0% |
!! | GGCAGCAGAGGCACTAGGTG+AGG | + | chr5.2:72716179-72716198 | MS.gene98565:CDS | 65.0% |
CCCGGCGGCACAACCGATGA+AGG | + | chr5.2:72717247-72717266 | MS.gene98565:CDS | 70.0% | |
CGGTTGTGCCGCCGGGTACT+TGG | - | chr5.2:72717243-72717262 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 72711372 | 72717660 | 72711372 | ID=MS.gene98565 |
chr5.2 | mRNA | 72711372 | 72717660 | 72711372 | ID=MS.gene98565.t1;Parent=MS.gene98565 |
chr5.2 | exon | 72711372 | 72711918 | 72711372 | ID=MS.gene98565.t1.exon1;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72711372 | 72711918 | 72711372 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72713015 | 72713164 | 72713015 | ID=MS.gene98565.t1.exon2;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72713015 | 72713164 | 72713015 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72713388 | 72713546 | 72713388 | ID=MS.gene98565.t1.exon3;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72713388 | 72713546 | 72713388 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72714154 | 72714330 | 72714154 | ID=MS.gene98565.t1.exon4;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72714154 | 72714330 | 72714154 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72714599 | 72714766 | 72714599 | ID=MS.gene98565.t1.exon5;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72714599 | 72714766 | 72714599 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72715800 | 72716263 | 72715800 | ID=MS.gene98565.t1.exon6;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72715800 | 72716263 | 72715800 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
chr5.2 | exon | 72717052 | 72717660 | 72717052 | ID=MS.gene98565.t1.exon7;Parent=MS.gene98565.t1 |
chr5.2 | CDS | 72717052 | 72717660 | 72717052 | ID=cds.MS.gene98565.t1;Parent=MS.gene98565.t1 |
Gene Sequence |
Protein sequence |