Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98578.t1 | PLY86617.1 | 70.5 | 346 | 44 | 7 | 1 | 292 | 5 | 346 | 1.20E-114 | 422.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98578.t1 | O05000 | 86.6 | 149 | 20 | 0 | 136 | 284 | 305 | 453 | 1.7e-61 | 237.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98578.t1 | A0A2J6LH08 | 70.5 | 346 | 44 | 7 | 1 | 292 | 5 | 346 | 8.5e-115 | 422.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene98578 | 0.817712 | 2.86E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene98578 | -0.810914 | 9.09E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene98578 | -0.801288 | 9.67E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene98578 | -0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene056973 | MS.gene98578 | -0.810072 | 1.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98578.t1 | MTR_5g077860 | 76.923 | 39 | 9 | 0 | 254 | 292 | 55 | 93 | 9.94e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98578.t1 | AT2G07689 | 96.178 | 157 | 6 | 0 | 136 | 292 | 58 | 214 | 4.30e-103 | 300 |
Find 0 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGCAAAAATAGAAATTTT+AGG | - | 57124:14129-14148 | MS.gene98578:intergenic | 15.0% |
| ! | AATCTGCTATATATTTGACA+CGG | - | 57124:14431-14450 | MS.gene98578:intergenic | 25.0% |
| ! | ATATAGAGTCAAAAGAGATA+TGG | - | 57124:14043-14062 | MS.gene98578:intergenic | 25.0% |
| ! | CTTGGATTATATATCCAAAA+AGG | - | 57124:13828-13847 | MS.gene98578:intergenic | 25.0% |
| ! | GTCAAATATATAGCAGATTT+GGG | + | 57124:14432-14451 | MS.gene98578:CDS | 25.0% |
| ! | TGTCAAATATATAGCAGATT+TGG | + | 57124:14431-14450 | MS.gene98578:CDS | 25.0% |
| !! | ATTTCACGTGTTTCTATTTA+TGG | + | 57124:14150-14169 | MS.gene98578:intron | 25.0% |
| !! | TTTTGGATATATAATCCAAG+TGG | + | 57124:13828-13847 | MS.gene98578:intron | 25.0% |
| !!! | TCTTTTGACTCTATATATGT+GGG | + | 57124:14047-14066 | MS.gene98578:intron | 25.0% |
| ATCTGCTATATATTTGACAC+GGG | - | 57124:14430-14449 | MS.gene98578:intergenic | 30.0% | |
| ATGTAGGTTATATTCGTACT+GGG | + | 57124:14298-14317 | MS.gene98578:CDS | 30.0% | |
| ATTACTATGTTCTCATACGT+AGG | + | 57124:14498-14517 | MS.gene98578:CDS | 30.0% | |
| GGAATTCAATCACTACTAAT+TGG | + | 57124:14342-14361 | MS.gene98578:CDS | 30.0% | |
| GTTTCTATTTATGGTTCCTA+TGG | + | 57124:14159-14178 | MS.gene98578:intron | 30.0% | |
| TACGTATGAGAACATAGTAA+TGG | - | 57124:14499-14518 | MS.gene98578:intergenic | 30.0% | |
| TAGTGATTGAATTCCTTCTA+TGG | - | 57124:14337-14356 | MS.gene98578:intergenic | 30.0% | |
| TTTATCATCGAAAACGAAGA+AGG | + | 57124:13500-13519 | MS.gene98578:CDS | 30.0% | |
| ! | AAATTTTAGGCGCAATAGAA+AGG | - | 57124:14116-14135 | MS.gene98578:intergenic | 30.0% |
| ! | AGCATTGCTTCTATGATTTT+AGG | + | 57124:14213-14232 | MS.gene98578:intron | 30.0% |
| ! | AGGTCTTTTTACTTTCGTTT+GGG | - | 57124:14256-14275 | MS.gene98578:intergenic | 30.0% |
| !! | ATAGAATTTGCTACAAAAGC+CGG | - | 57124:14538-14557 | MS.gene98578:intergenic | 30.0% |
| !! | CTCTTTTGACTCTATATATG+TGG | + | 57124:14046-14065 | MS.gene98578:intron | 30.0% |
| AGCCAAAACGAATCCTATTT+CGG | + | 57124:14461-14480 | MS.gene98578:CDS | 35.0% | |
| ATAGAAAGGAATGCTGTAAC+CGG | - | 57124:14102-14121 | MS.gene98578:intergenic | 35.0% | |
| CATAGTTCAATTGGACATGT+AGG | + | 57124:14282-14301 | MS.gene98578:CDS | 35.0% | |
| CATGTAGGTTATATTCGTAC+TGG | + | 57124:14297-14316 | MS.gene98578:CDS | 35.0% | |
| CTTGAGAGATGGAATAGATA+GGG | - | 57124:13989-14008 | MS.gene98578:intergenic | 35.0% | |
| TATATAATCCAAGTGGAGAG+TGG | + | 57124:13835-13854 | MS.gene98578:intron | 35.0% | |
| TGGAAAACTACTTTCACGTT+CGG | + | 57124:13880-13899 | MS.gene98578:intron | 35.0% | |
| TTGCCGTAATGCTAAAACTA+TGG | - | 57124:14406-14425 | MS.gene98578:intergenic | 35.0% | |
| ! | GAAAGTAGTTTTCCATCAGA+CGG | - | 57124:13875-13894 | MS.gene98578:intergenic | 35.0% |
| ! | GAGGTCTTTTTACTTTCGTT+TGG | - | 57124:14257-14276 | MS.gene98578:intergenic | 35.0% |
| ! | TGAGAACATAGTAATGGAGA+AGG | - | 57124:14493-14512 | MS.gene98578:intergenic | 35.0% |
| !! | CTTTCCAGCCTTATTCAAAT+GGG | - | 57124:13358-13377 | MS.gene98578:intergenic | 35.0% |
| !! | TCTTTCCAGCCTTATTCAAA+TGG | - | 57124:13359-13378 | MS.gene98578:intergenic | 35.0% |
| !! | TTCTATGATTTTAGGAGCAC+TGG | + | 57124:14221-14240 | MS.gene98578:intron | 35.0% |
| !! | TTTCCAGCCTTATTCAAATG+GGG | - | 57124:13357-13376 | MS.gene98578:intergenic | 35.0% |
| !!! | TCGCCATAGTTTTAGCATTA+CGG | + | 57124:14400-14419 | MS.gene98578:CDS | 35.0% |
| AAAAGAGATATGGAGTCCGA+AGG | - | 57124:14033-14052 | MS.gene98578:intergenic | 40.0% | |
| AAAGAGATATGGAGTCCGAA+GGG | - | 57124:14032-14051 | MS.gene98578:intergenic | 40.0% | |
| AGCATTCCCTTATCTGAACT+TGG | - | 57124:13389-13408 | MS.gene98578:intergenic | 40.0% | |
| AGCCTTTCCTTTAATGGTTG+GGG | - | 57124:13414-13433 | MS.gene98578:intergenic | 40.0% | |
| ATTCCCTTATCTGAACTTGG+CGG | - | 57124:13386-13405 | MS.gene98578:intergenic | 40.0% | |
| CCAATTGAACTATGAGCTAG+AGG | - | 57124:14276-14295 | MS.gene98578:intergenic | 40.0% | |
| GACTAGCGTTATAGGTTGTT+GGG | + | 57124:14614-14633 | MS.gene98578:CDS | 40.0% | |
| GAGAAGGTTATAGCCGAAAT+AGG | - | 57124:14477-14496 | MS.gene98578:intergenic | 40.0% | |
| GAGCCTTTCCTTTAATGGTT+GGG | - | 57124:13415-13434 | MS.gene98578:intergenic | 40.0% | |
| GCTTGAGAGATGGAATAGAT+AGG | - | 57124:13990-14009 | MS.gene98578:intergenic | 40.0% | |
| TAGAAAGGAATGCTGTAACC+GGG | - | 57124:14101-14120 | MS.gene98578:intergenic | 40.0% | |
| TGACTAGCGTTATAGGTTGT+TGG | + | 57124:14613-14632 | MS.gene98578:CDS | 40.0% | |
| TTCTCATGTGGAACCATAGA+AGG | + | 57124:14321-14340 | MS.gene98578:CDS | 40.0% | |
| TTGTTGCAATGTAGCTCCAT+AGG | - | 57124:14178-14197 | MS.gene98578:intergenic | 40.0% | |
| ! | AGCCGAAATAGGATTCGTTT+TGG | - | 57124:14466-14485 | MS.gene98578:intergenic | 40.0% |
| ! | CCTCTAGCTCATAGTTCAAT+TGG | + | 57124:14273-14292 | MS.gene98578:CDS | 40.0% |
| ! | TATTTGTTCTTCGCCGCTTT+GGG | + | 57124:14555-14574 | MS.gene98578:CDS | 40.0% |
| ! | TTTTACTTTCGTTTGGGCCA+TGG | - | 57124:14250-14269 | MS.gene98578:intergenic | 40.0% |
| !! | CGGCGAATTCAACACTTTTT+GGG | + | 57124:13963-13982 | MS.gene98578:intron | 40.0% |
| !! | TTCCAGCCTTATTCAAATGG+GGG | - | 57124:13356-13375 | MS.gene98578:intergenic | 40.0% |
| AAGAGATATGGAGTCCGAAG+GGG | - | 57124:14031-14050 | MS.gene98578:intergenic | 45.0% | |
| AGAAAGGAATGCTGTAACCG+GGG | - | 57124:14100-14119 | MS.gene98578:intergenic | 45.0% | |
| ATATAAAGGGCAGGCAACGA+AGG | - | 57124:13637-13656 | MS.gene98578:intergenic | 45.0% | |
| ATGCTTCCCCCAACCATTAA+AGG | + | 57124:13404-13423 | MS.gene98578:CDS | 45.0% | |
| ATTCGTACTGGGTTCTCATG+TGG | + | 57124:14309-14328 | MS.gene98578:CDS | 45.0% | |
| CGAGCCTTTCCTTTAATGGT+TGG | - | 57124:13416-13435 | MS.gene98578:intergenic | 45.0% | |
| CTATTTGTTCTTCGCCGCTT+TGG | + | 57124:14554-14573 | MS.gene98578:CDS | 45.0% | |
| CTGGCAACAACAGAAAGGAA+GGG | + | 57124:13674-13693 | MS.gene98578:CDS | 45.0% | |
| GCCTTTCCTTTAATGGTTGG+GGG | - | 57124:13413-13432 | MS.gene98578:intergenic | 45.0% | |
| GGAGTAGTGACTAGCGTTAT+AGG | + | 57124:14606-14625 | MS.gene98578:CDS | 45.0% | |
| GGTGAACCCTCATAGATATC+AGG | - | 57124:14075-14094 | MS.gene98578:intergenic | 45.0% | |
| GTTGCCTGCCCTTTATATCT+CGG | + | 57124:13639-13658 | MS.gene98578:CDS | 45.0% | |
| TAAAGGAAAGGCTCGACGAA+GGG | + | 57124:13421-13440 | MS.gene98578:CDS | 45.0% | |
| TACGGTGCGTGTTATCTGAA+GGG | + | 57124:13535-13554 | MS.gene98578:CDS | 45.0% | |
| TAGCGTTATAGGTTGTTGGG+CGG | + | 57124:14617-14636 | MS.gene98578:CDS | 45.0% | |
| TATCCAAAAAGGTCCGCTCT+TGG | - | 57124:13817-13836 | MS.gene98578:intergenic | 45.0% | |
| TCCCCCAACCATTAAAGGAA+AGG | + | 57124:13409-13428 | MS.gene98578:CDS | 45.0% | |
| TCGTCGAGCCTTTCCTTTAA+TGG | - | 57124:13420-13439 | MS.gene98578:intergenic | 45.0% | |
| TGGCAACAACAGAAAGGAAG+GGG | + | 57124:13675-13694 | MS.gene98578:CDS | 45.0% | |
| TGGGCACCTGATATCTATGA+GGG | + | 57124:14066-14085 | MS.gene98578:intron | 45.0% | |
| TTAAAGGAAAGGCTCGACGA+AGG | + | 57124:13420-13439 | MS.gene98578:CDS | 45.0% | |
| TTCCCTTATCTGAACTTGGC+GGG | - | 57124:13385-13404 | MS.gene98578:intergenic | 45.0% | |
| TTGCTACAAAAGCCGGCTAA+CGG | - | 57124:14531-14550 | MS.gene98578:intergenic | 45.0% | |
| TTTATTCGGGGCTTGAGAGA+TGG | - | 57124:14000-14019 | MS.gene98578:intergenic | 45.0% | |
| ! | GCGGCGAATTCAACACTTTT+TGG | + | 57124:13962-13981 | MS.gene98578:intron | 45.0% |
| !! | AAAAGTGTTGAATTCGCCGC+TGG | - | 57124:13962-13981 | MS.gene98578:intergenic | 45.0% |
| !! | AAAGTGTTGAATTCGCCGCT+GGG | - | 57124:13961-13980 | MS.gene98578:intergenic | 45.0% |
| !! | TCCAGCCTTATTCAAATGGG+GGG | - | 57124:13355-13374 | MS.gene98578:intergenic | 45.0% |
| AAAACGAAGAAGGCCGAGGA+TGG | + | 57124:13510-13529 | MS.gene98578:CDS | 50.0% | |
| AACCCCCCCCCATTTGAATA+AGG | + | 57124:13347-13366 | MS.gene98578:CDS | 50.0% | |
| AATAAAACCCCCCTCCCCTT+CGG | + | 57124:14014-14033 | MS.gene98578:intron | 50.0% | |
| ATCGAAAACGAAGAAGGCCG+AGG | + | 57124:13506-13525 | MS.gene98578:CDS | 50.0% | |
| ATGCCCGCCAAGTTCAGATA+AGG | + | 57124:13379-13398 | MS.gene98578:CDS | 50.0% | |
| CAAGTGGAGAGTGGAGTTAC+GGG | + | 57124:13844-13863 | MS.gene98578:intron | 50.0% | |
| CCAAGTGGAGAGTGGAGTTA+CGG | + | 57124:13843-13862 | MS.gene98578:intron | 50.0% | |
| CTACGGTGCGTGTTATCTGA+AGG | + | 57124:13534-13553 | MS.gene98578:CDS | 50.0% | |
| CTTCAGATAACACGCACCGT+AGG | - | 57124:13536-13555 | MS.gene98578:intergenic | 50.0% | |
| CTTTCGTGTGAATTCCCCAG+CGG | + | 57124:13943-13962 | MS.gene98578:intron | 50.0% | |
| GCTGGCAACAACAGAAAGGA+AGG | + | 57124:13673-13692 | MS.gene98578:CDS | 50.0% | |
| GCTGGGGAATTCACACGAAA+GGG | - | 57124:13944-13963 | MS.gene98578:intergenic | 50.0% | |
| GTGGGCACCTGATATCTATG+AGG | + | 57124:14065-14084 | MS.gene98578:intron | 50.0% | |
| TACTTTCGTTTGGGCCATGG+CGG | - | 57124:14247-14266 | MS.gene98578:intergenic | 50.0% | |
| TGCCACGAGTCAGTCAGTTT+GGG | + | 57124:14649-14668 | MS.gene98578:CDS | 50.0% | |
| TGCCCGCCAAGTTCAGATAA+GGG | + | 57124:13380-13399 | MS.gene98578:CDS | 50.0% | |
| TGCTACAAAAGCCGGCTAAC+GGG | - | 57124:14530-14549 | MS.gene98578:intergenic | 50.0% | |
| TTATTCAAATGGGGGGGGGT+TGG | - | 57124:13348-13367 | MS.gene98578:intergenic | 50.0% | |
| TTCCCGGGCCGAGATATAAA+GGG | - | 57124:13650-13669 | MS.gene98578:intergenic | 50.0% | |
| TTGCCACGAGTCAGTCAGTT+TGG | + | 57124:14648-14667 | MS.gene98578:CDS | 50.0% | |
| TTTCCCGGGCCGAGATATAA+AGG | - | 57124:13651-13670 | MS.gene98578:intergenic | 50.0% | |
| ! | AGAGGCGTGGTTATCTCAAG+TGG | - | 57124:13773-13792 | MS.gene98578:intergenic | 50.0% |
| !! | AAGCGCTGGCAACAACAGAA+AGG | + | 57124:13669-13688 | MS.gene98578:CDS | 50.0% |
| !! | AAGTGTTGAATTCGCCGCTG+GGG | - | 57124:13960-13979 | MS.gene98578:intergenic | 50.0% |
| !! | AGCCTTATTCAAATGGGGGG+GGG | - | 57124:13352-13371 | MS.gene98578:intergenic | 50.0% |
| !! | CAGCCTTATTCAAATGGGGG+GGG | - | 57124:13353-13372 | MS.gene98578:intergenic | 50.0% |
| !! | CCAGCCTTATTCAAATGGGG+GGG | - | 57124:13354-13373 | MS.gene98578:intergenic | 50.0% |
| !!! | AAGGGGAGGGGGGTTTTATT+CGG | - | 57124:14014-14033 | MS.gene98578:intergenic | 50.0% |
| AAGGAATGCTGTAACCGGGG+TGG | - | 57124:14097-14116 | MS.gene98578:intergenic | 55.0% | |
| ACGAAGGCTGCTATCCCAAG+AGG | - | 57124:13621-13640 | MS.gene98578:intergenic | 55.0% | |
| ACGCTAGTCACTACTCCCAC+TGG | - | 57124:14603-14622 | MS.gene98578:intergenic | 55.0% | |
| AGATATGGAGTCCGAAGGGG+AGG | - | 57124:14028-14047 | MS.gene98578:intergenic | 55.0% | |
| AGGAATGCTGTAACCGGGGT+GGG | - | 57124:14096-14115 | MS.gene98578:intergenic | 55.0% | |
| ATATGGAGTCCGAAGGGGAG+GGG | - | 57124:14026-14045 | MS.gene98578:intergenic | 55.0% | |
| CAGTCAGTTTGGGGGACCTA+AGG | + | 57124:14659-14678 | MS.gene98578:CDS | 55.0% | |
| CCACGAGTCAGTCAGTTTGG+GGG | + | 57124:14651-14670 | MS.gene98578:CDS | 55.0% | |
| CCCCCCCATTTGAATAAGGC+TGG | + | 57124:13351-13370 | MS.gene98578:CDS | 55.0% | |
| CCGTAACTCCACTCTCCACT+TGG | - | 57124:13846-13865 | MS.gene98578:intergenic | 55.0% | |
| CGACCGCGGTGGTATGATTT+GGG | + | 57124:13570-13589 | MS.gene98578:CDS | 55.0% | |
| CGCTAGTCACTACTCCCACT+GGG | - | 57124:14602-14621 | MS.gene98578:intergenic | 55.0% | |
| CGCTGGGGAATTCACACGAA+AGG | - | 57124:13945-13964 | MS.gene98578:intergenic | 55.0% | |
| CGGGGGAAGGAAAACGCTTT+CGG | + | 57124:13456-13475 | MS.gene98578:CDS | 55.0% | |
| CTACAAAAGCCGGCTAACGG+GGG | - | 57124:14528-14547 | MS.gene98578:intergenic | 55.0% | |
| CTGCCCTTTATATCTCGGCC+CGG | + | 57124:13644-13663 | MS.gene98578:CDS | 55.0% | |
| GACCGCGGTGGTATGATTTG+GGG | + | 57124:13571-13590 | MS.gene98578:CDS | 55.0% | |
| GAGATAACCACGCCTCTGCT+AGG | + | 57124:13776-13795 | MS.gene98578:intron | 55.0% | |
| GATATGGAGTCCGAAGGGGA+GGG | - | 57124:14027-14046 | MS.gene98578:intergenic | 55.0% | |
| GCCACGAGTCAGTCAGTTTG+GGG | + | 57124:14650-14669 | MS.gene98578:CDS | 55.0% | |
| GCTACAAAAGCCGGCTAACG+GGG | - | 57124:14529-14548 | MS.gene98578:intergenic | 55.0% | |
| GCTAGTCACTACTCCCACTG+GGG | - | 57124:14601-14620 | MS.gene98578:intergenic | 55.0% | |
| GCTTACTTCCTAGCCCCAGT+GGG | + | 57124:14585-14604 | MS.gene98578:CDS | 55.0% | |
| GTAAGCCCCACAACCCAAAG+CGG | - | 57124:14571-14590 | MS.gene98578:intergenic | 55.0% | |
| GTAGGAATACCCCCGTTAGC+CGG | + | 57124:14516-14535 | MS.gene98578:CDS | 55.0% | |
| GTTATAGGTTGTTGGGCGGC+CGG | + | 57124:14621-14640 | MS.gene98578:CDS | 55.0% | |
| TAAGGCAGTTCTCCGTGCAC+CGG | + | 57124:14677-14696 | MS.gene98578:CDS | 55.0% | |
| TCGACCGCGGTGGTATGATT+TGG | + | 57124:13569-13588 | MS.gene98578:CDS | 55.0% | |
| TGCCCTTTATATCTCGGCCC+GGG | + | 57124:13645-13664 | MS.gene98578:CDS | 55.0% | |
| TGTTGTTGCCAGCGCTTTCC+CGG | - | 57124:13666-13685 | MS.gene98578:intergenic | 55.0% | |
| TTACGGGAACAGCCGTCTGA+TGG | + | 57124:13860-13879 | MS.gene98578:intron | 55.0% | |
| TTCTTAGTCGATGGGGCAGC+AGG | + | 57124:13720-13739 | MS.gene98578:CDS | 55.0% | |
| ! | CTGCCCCATCGACTAAGAAG+GGG | - | 57124:13719-13738 | MS.gene98578:intergenic | 55.0% |
| ! | GCTGCCCCATCGACTAAGAA+GGG | - | 57124:13720-13739 | MS.gene98578:intergenic | 55.0% |
| ! | TGCCCCATCGACTAAGAAGG+GGG | - | 57124:13718-13737 | MS.gene98578:intergenic | 55.0% |
| ! | TGCTGCCCCATCGACTAAGA+AGG | - | 57124:13721-13740 | MS.gene98578:intergenic | 55.0% |
| ! | TGGCCAAGAGCGGACCTTTT+TGG | + | 57124:13811-13830 | MS.gene98578:intron | 55.0% |
| !! | ACTGACTCGTGGCAACCTTC+CGG | - | 57124:14643-14662 | MS.gene98578:intergenic | 55.0% |
| !! | TCTTCGCCGCTTTGGGTTGT+GGG | + | 57124:14562-14581 | MS.gene98578:CDS | 55.0% |
| !! | TTCTTCGCCGCTTTGGGTTG+TGG | + | 57124:14561-14580 | MS.gene98578:CDS | 55.0% |
| !!! | AGGGGAGGGGGGTTTTATTC+GGG | - | 57124:14013-14032 | MS.gene98578:intergenic | 55.0% |
| !!! | GGAACACGCTTTTTCGACCG+CGG | + | 57124:13556-13575 | MS.gene98578:CDS | 55.0% |
| AGAAGGCCGAGGATGGCCTA+CGG | + | 57124:13517-13536 | MS.gene98578:CDS | 60.0% | |
| AGGAAAGGCTCGACGAAGGG+AGG | + | 57124:13424-13443 | MS.gene98578:CDS | 60.0% | |
| AGTCGATGGGGCAGCAGGTT+CGG | + | 57124:13725-13744 | MS.gene98578:intron | 60.0% | |
| CCGCCCCCTTCTTAGTCGAT+GGG | + | 57124:13712-13731 | MS.gene98578:CDS | 60.0% | |
| CGCCCCCTTCTTAGTCGATG+GGG | + | 57124:13713-13732 | MS.gene98578:CDS | 60.0% | |
| CGGGCCGAGATATAAAGGGC+AGG | - | 57124:13646-13665 | MS.gene98578:intergenic | 60.0% | |
| CTATGAGGGTTCACCCACCC+CGG | + | 57124:14080-14099 | MS.gene98578:intron | 60.0% | |
| CTGCTAGGCAGCGTGTGGAA+TGG | + | 57124:13791-13810 | MS.gene98578:intron | 60.0% | |
| CTGCTATCCCAAGAGGCCTG+CGG | - | 57124:13614-13633 | MS.gene98578:intergenic | 60.0% | |
| GCGTGTGGAATGGCCAAGAG+CGG | + | 57124:13801-13820 | MS.gene98578:intron | 60.0% | |
| GGAAAGGCTCGACGAAGGGA+GGG | + | 57124:13425-13444 | MS.gene98578:CDS | 60.0% | |
| GGCCCCAAATCATACCACCG+CGG | - | 57124:13576-13595 | MS.gene98578:intergenic | 60.0% | |
| GGCTTACTTCCTAGCCCCAG+TGG | + | 57124:14584-14603 | MS.gene98578:CDS | 60.0% | |
| GGTGCACGGAGAACTGCCTT+AGG | - | 57124:14678-14697 | MS.gene98578:intergenic | 60.0% | |
| GTTGTTGCCAGCGCTTTCCC+GGG | - | 57124:13665-13684 | MS.gene98578:intergenic | 60.0% | |
| TATGGAGTCCGAAGGGGAGG+GGG | - | 57124:14025-14044 | MS.gene98578:intergenic | 60.0% | |
| TCACTACTCCCACTGGGGCT+AGG | - | 57124:14596-14615 | MS.gene98578:intergenic | 60.0% | |
| TCCGCCCCCTTCTTAGTCGA+TGG | + | 57124:13711-13730 | MS.gene98578:CDS | 60.0% | |
| TCGACGAAGGGAGGGAGATG+CGG | + | 57124:13433-13452 | MS.gene98578:CDS | 60.0% | |
| TGCTATCCCAAGAGGCCTGC+GGG | - | 57124:13613-13632 | MS.gene98578:intergenic | 60.0% | |
| TTCCACACGCTGCCTAGCAG+AGG | - | 57124:13791-13810 | MS.gene98578:intergenic | 60.0% | |
| ! | CCCATCGACTAAGAAGGGGG+CGG | - | 57124:13715-13734 | MS.gene98578:intergenic | 60.0% |
| !! | CCCCCAAACTGACTGACTCG+TGG | - | 57124:14654-14673 | MS.gene98578:intergenic | 60.0% |
| !! | CTTCGCCGCTTTGGGTTGTG+GGG | + | 57124:14563-14582 | MS.gene98578:CDS | 60.0% |
| !! | TTTAGGAGCACTGGCCGCCA+TGG | + | 57124:14230-14249 | MS.gene98578:intron | 60.0% |
| !!! | ACACGCTTTTTCGACCGCGG+TGG | + | 57124:13559-13578 | MS.gene98578:CDS | 60.0% |
| !!! | GGGGAGGGGGGTTTTATTCG+GGG | - | 57124:14012-14031 | MS.gene98578:intergenic | 60.0% |
| AAGGGGGCGGACGCACTACA+TGG | - | 57124:13702-13721 | MS.gene98578:intergenic | 65.0% | |
| ACGAAGGGAGGGAGATGCGG+CGG | + | 57124:13436-13455 | MS.gene98578:CDS | 65.0% | |
| ATGGAGTCCGAAGGGGAGGG+GGG | - | 57124:14024-14043 | MS.gene98578:intergenic | 65.0% | |
| CACGCACCGTAGGCCATCCT+CGG | - | 57124:13526-13545 | MS.gene98578:intergenic | 65.0% | |
| TAGGTTGTTGGGCGGCCGGA+AGG | + | 57124:14625-14644 | MS.gene98578:CDS | 65.0% | |
| TATCCCAAGAGGCCTGCGGG+CGG | - | 57124:13610-13629 | MS.gene98578:intergenic | 65.0% | |
| AAGGGAGGGAGATGCGGCGG+GGG | + | 57124:13439-13458 | MS.gene98578:CDS | 70.0% | |
| CACGCTGCCTAGCAGAGGCG+TGG | - | 57124:13786-13805 | MS.gene98578:intergenic | 70.0% | |
| CGAAGGGAGGGAGATGCGGC+GGG | + | 57124:13437-13456 | MS.gene98578:CDS | 70.0% | |
| CGCCTCTGCTAGGCAGCGTG+TGG | + | 57124:13786-13805 | MS.gene98578:intron | 70.0% | |
| GAAGGGAGGGAGATGCGGCG+GGG | + | 57124:13438-13457 | MS.gene98578:CDS | 70.0% | |
| GTTCCGCCCGCAGGCCTCTT+GGG | + | 57124:13604-13623 | MS.gene98578:CDS | 70.0% | |
| ! | ATCTCGGCCCGGGAAAGCGC+TGG | + | 57124:13655-13674 | MS.gene98578:CDS | 70.0% |
| AGAGGCCTGCGGGCGGAACG+CGG | - | 57124:13603-13622 | MS.gene98578:intergenic | 75.0% | |
| CGTTCCGCCCGCAGGCCTCT+TGG | + | 57124:13603-13622 | MS.gene98578:CDS | 75.0% | |
| CTGCGGGCGGAACGCGGAGA+GGG | - | 57124:13597-13616 | MS.gene98578:intergenic | 75.0% | |
| GAGGGAGATGCGGCGGGGGA+AGG | + | 57124:13443-13462 | MS.gene98578:CDS | 75.0% | |
| ! | CCTCTCCGCGTTCCGCCCGC+AGG | + | 57124:13595-13614 | MS.gene98578:CDS | 80.0% |
| ! | CCTGCGGGCGGAACGCGGAG+AGG | - | 57124:13598-13617 | MS.gene98578:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57124 | gene | 13336 | 14707 | 13336 | ID=MS.gene98578 |
| 57124 | mRNA | 13336 | 14707 | 13336 | ID=MS.gene98578.t1;Parent=MS.gene98578 |
| 57124 | exon | 13336 | 13741 | 13336 | ID=MS.gene98578.t1.exon1;Parent=MS.gene98578.t1 |
| 57124 | CDS | 13336 | 13741 | 13336 | ID=cds.MS.gene98578.t1;Parent=MS.gene98578.t1 |
| 57124 | exon | 14235 | 14707 | 14235 | ID=MS.gene98578.t1.exon2;Parent=MS.gene98578.t1 |
| 57124 | CDS | 14235 | 14707 | 14235 | ID=cds.MS.gene98578.t1;Parent=MS.gene98578.t1 |
| Gene Sequence |
| Protein sequence |
