Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99333.t1 | PLY86617.1 | 62.1 | 346 | 43 | 8 | 1 | 262 | 5 | 346 | 7.90E-94 | 353.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99333.t1 | P15688 | 97.8 | 91 | 2 | 0 | 161 | 251 | 328 | 418 | 4.2e-43 | 176.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99333.t1 | A0A2J6LH08 | 62.1 | 346 | 43 | 8 | 1 | 262 | 5 | 346 | 5.7e-94 | 353.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene99333 | 0.820024 | 8.54E-53 | -1.69E-46 |
| MS.gene052586 | MS.gene99333 | -0.803451 | 3.46E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene99333 | -0.815457 | 9.16E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99333.t1 | MTR_5g077860 | 76.923 | 39 | 9 | 0 | 224 | 262 | 55 | 93 | 5.15e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99333.t1 | AT2G07689 | 77.707 | 157 | 5 | 1 | 136 | 262 | 58 | 214 | 1.31e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGCAAAAATAGAAATTTT+AGG | - | 57118:11435-11454 | None:intergenic | 15.0% |
| ! | AATCTGCTATATATTTGACA+CGG | - | 57118:11737-11756 | None:intergenic | 25.0% |
| ! | ATATAGAGTCAAAAGAGATA+TGG | - | 57118:11349-11368 | None:intergenic | 25.0% |
| ! | CTTGGATTATATATCCAAAA+AGG | - | 57118:11134-11153 | None:intergenic | 25.0% |
| ! | GTCAAATATATAGCAGATTT+GGG | + | 57118:11738-11757 | MS.gene99333:CDS | 25.0% |
| ! | TGTCAAATATATAGCAGATT+TGG | + | 57118:11737-11756 | MS.gene99333:CDS | 25.0% |
| !! | ATTTCACGTGTTTCTATTTA+TGG | + | 57118:11456-11475 | MS.gene99333:intron | 25.0% |
| !! | TTTTGGATATATAATCCAAG+TGG | + | 57118:11134-11153 | MS.gene99333:intron | 25.0% |
| !!! | TCTTTTGACTCTATATATGT+GGG | + | 57118:11353-11372 | MS.gene99333:intron | 25.0% |
| ATCTGCTATATATTTGACAC+GGG | - | 57118:11736-11755 | None:intergenic | 30.0% | |
| ATGTAGGTTATATTCGTACT+GGG | + | 57118:11604-11623 | MS.gene99333:intron | 30.0% | |
| ATTACTATGTTCTCATACGT+AGG | + | 57118:11804-11823 | MS.gene99333:CDS | 30.0% | |
| GGAATTCAATCACTACTAAT+TGG | + | 57118:11648-11667 | MS.gene99333:intron | 30.0% | |
| GTTTCTATTTATGGTTCCTA+TGG | + | 57118:11465-11484 | MS.gene99333:intron | 30.0% | |
| TACGTATGAGAACATAGTAA+TGG | - | 57118:11805-11824 | None:intergenic | 30.0% | |
| TAGTGATTGAATTCCTTCTA+TGG | - | 57118:11643-11662 | None:intergenic | 30.0% | |
| TTTATCATCGAAAACGAAGA+AGG | + | 57118:10806-10825 | MS.gene99333:CDS | 30.0% | |
| ! | AAATTTTAGGCGCAATAGAA+AGG | - | 57118:11422-11441 | None:intergenic | 30.0% |
| ! | AGCATTGCTTCTATGATTTT+AGG | + | 57118:11519-11538 | MS.gene99333:intron | 30.0% |
| ! | AGGTCTTTTTACTTTCGTTT+GGG | - | 57118:11562-11581 | None:intergenic | 30.0% |
| !! | ATAGAATTTGCTACAAAAGC+CGG | - | 57118:11844-11863 | None:intergenic | 30.0% |
| !! | CTCTTTTGACTCTATATATG+TGG | + | 57118:11352-11371 | MS.gene99333:intron | 30.0% |
| AGCCAAAACGAATCCTATTT+CGG | + | 57118:11767-11786 | MS.gene99333:CDS | 35.0% | |
| ATAGAAAGGAATGCTGTAAC+CGG | - | 57118:11408-11427 | None:intergenic | 35.0% | |
| CATAGTTCAATTGGACATGT+AGG | + | 57118:11588-11607 | MS.gene99333:CDS | 35.0% | |
| CATGTAGGTTATATTCGTAC+TGG | + | 57118:11603-11622 | MS.gene99333:intron | 35.0% | |
| CTTGAGAGATGGAATAGATA+GGG | - | 57118:11295-11314 | None:intergenic | 35.0% | |
| TATATAATCCAAGTGGAGAG+TGG | + | 57118:11141-11160 | MS.gene99333:intron | 35.0% | |
| TGGAAAACTACTTTCACGTT+CGG | + | 57118:11186-11205 | MS.gene99333:intron | 35.0% | |
| TTGCCGTAATGCTAAAACTA+TGG | - | 57118:11712-11731 | None:intergenic | 35.0% | |
| ! | GAAAGTAGTTTTCCATCAGA+CGG | - | 57118:11181-11200 | None:intergenic | 35.0% |
| ! | GAGGTCTTTTTACTTTCGTT+TGG | - | 57118:11563-11582 | None:intergenic | 35.0% |
| ! | TGAGAACATAGTAATGGAGA+AGG | - | 57118:11799-11818 | None:intergenic | 35.0% |
| !! | CTTTCCAGCCTTATTCAAAT+GGG | - | 57118:10664-10683 | None:intergenic | 35.0% |
| !! | TCTTTCCAGCCTTATTCAAA+TGG | - | 57118:10665-10684 | None:intergenic | 35.0% |
| !! | TTCTATGATTTTAGGAGCAC+TGG | + | 57118:11527-11546 | MS.gene99333:intron | 35.0% |
| !! | TTTCCAGCCTTATTCAAATG+GGG | - | 57118:10663-10682 | None:intergenic | 35.0% |
| !!! | TCGCCATAGTTTTAGCATTA+CGG | + | 57118:11706-11725 | MS.gene99333:CDS | 35.0% |
| AAAAGAGATATGGAGTCCGA+AGG | - | 57118:11339-11358 | None:intergenic | 40.0% | |
| AAAGAGATATGGAGTCCGAA+GGG | - | 57118:11338-11357 | None:intergenic | 40.0% | |
| AGCATTCCCTTATCTGAACT+TGG | - | 57118:10695-10714 | None:intergenic | 40.0% | |
| AGCCTTTCCTTTAATGGTTG+GGG | - | 57118:10720-10739 | None:intergenic | 40.0% | |
| ATTCCCTTATCTGAACTTGG+CGG | - | 57118:10692-10711 | None:intergenic | 40.0% | |
| CCAATTGAACTATGAGCTAG+AGG | - | 57118:11582-11601 | None:intergenic | 40.0% | |
| GACTAGCGTTATAGGTTGTT+GGG | + | 57118:11920-11939 | MS.gene99333:CDS | 40.0% | |
| GAGAAGGTTATAGCCGAAAT+AGG | - | 57118:11783-11802 | None:intergenic | 40.0% | |
| GAGCCTTTCCTTTAATGGTT+GGG | - | 57118:10721-10740 | None:intergenic | 40.0% | |
| GCTTGAGAGATGGAATAGAT+AGG | - | 57118:11296-11315 | None:intergenic | 40.0% | |
| TAGAAAGGAATGCTGTAACC+GGG | - | 57118:11407-11426 | None:intergenic | 40.0% | |
| TGACTAGCGTTATAGGTTGT+TGG | + | 57118:11919-11938 | MS.gene99333:CDS | 40.0% | |
| TTCTCATGTGGAACCATAGA+AGG | + | 57118:11627-11646 | MS.gene99333:intron | 40.0% | |
| TTGTTGCAATGTAGCTCCAT+AGG | - | 57118:11484-11503 | None:intergenic | 40.0% | |
| ! | AGCCGAAATAGGATTCGTTT+TGG | - | 57118:11772-11791 | None:intergenic | 40.0% |
| ! | CCTCTAGCTCATAGTTCAAT+TGG | + | 57118:11579-11598 | MS.gene99333:CDS | 40.0% |
| ! | TATTTGTTCTTCGCCGCTTT+GGG | + | 57118:11861-11880 | MS.gene99333:CDS | 40.0% |
| ! | TTTTACTTTCGTTTGGGCCA+TGG | - | 57118:11556-11575 | None:intergenic | 40.0% |
| !! | CGGCGAATTCAACACTTTTT+GGG | + | 57118:11269-11288 | MS.gene99333:intron | 40.0% |
| !! | TTCCAGCCTTATTCAAATGG+GGG | - | 57118:10662-10681 | None:intergenic | 40.0% |
| AAGAGATATGGAGTCCGAAG+GGG | - | 57118:11337-11356 | None:intergenic | 45.0% | |
| AGAAAGGAATGCTGTAACCG+GGG | - | 57118:11406-11425 | None:intergenic | 45.0% | |
| ATATAAAGGGCAGGCAACGA+AGG | - | 57118:10943-10962 | None:intergenic | 45.0% | |
| ATGCTTCCCCCAACCATTAA+AGG | + | 57118:10710-10729 | MS.gene99333:CDS | 45.0% | |
| ATTCGTACTGGGTTCTCATG+TGG | + | 57118:11615-11634 | MS.gene99333:intron | 45.0% | |
| CGAGCCTTTCCTTTAATGGT+TGG | - | 57118:10722-10741 | None:intergenic | 45.0% | |
| CTATTTGTTCTTCGCCGCTT+TGG | + | 57118:11860-11879 | MS.gene99333:CDS | 45.0% | |
| CTGGCAACAACAGAAAGGAA+GGG | + | 57118:10980-10999 | MS.gene99333:CDS | 45.0% | |
| GCCTTTCCTTTAATGGTTGG+GGG | - | 57118:10719-10738 | None:intergenic | 45.0% | |
| GGAGTAGTGACTAGCGTTAT+AGG | + | 57118:11912-11931 | MS.gene99333:CDS | 45.0% | |
| GGTGAACCCTCATAGATATC+AGG | - | 57118:11381-11400 | None:intergenic | 45.0% | |
| GTTGCCTGCCCTTTATATCT+CGG | + | 57118:10945-10964 | MS.gene99333:CDS | 45.0% | |
| TAAAGGAAAGGCTCGACGAA+GGG | + | 57118:10727-10746 | MS.gene99333:CDS | 45.0% | |
| TACGGTGCGTGTTATCTGAA+GGG | + | 57118:10841-10860 | MS.gene99333:CDS | 45.0% | |
| TAGCGTTATAGGTTGTTGGG+CGG | + | 57118:11923-11942 | MS.gene99333:CDS | 45.0% | |
| TATCCAAAAAGGTCCGCTCT+TGG | - | 57118:11123-11142 | None:intergenic | 45.0% | |
| TCCCCCAACCATTAAAGGAA+AGG | + | 57118:10715-10734 | MS.gene99333:CDS | 45.0% | |
| TCGTCGAGCCTTTCCTTTAA+TGG | - | 57118:10726-10745 | None:intergenic | 45.0% | |
| TGGCAACAACAGAAAGGAAG+GGG | + | 57118:10981-11000 | MS.gene99333:CDS | 45.0% | |
| TGGGCACCTGATATCTATGA+GGG | + | 57118:11372-11391 | MS.gene99333:intron | 45.0% | |
| TTAAAGGAAAGGCTCGACGA+AGG | + | 57118:10726-10745 | MS.gene99333:CDS | 45.0% | |
| TTCCCTTATCTGAACTTGGC+GGG | - | 57118:10691-10710 | None:intergenic | 45.0% | |
| TTGCTACAAAAGCCGGCTAA+CGG | - | 57118:11837-11856 | None:intergenic | 45.0% | |
| TTTATTCGGGGCTTGAGAGA+TGG | - | 57118:11306-11325 | None:intergenic | 45.0% | |
| ! | GCGGCGAATTCAACACTTTT+TGG | + | 57118:11268-11287 | MS.gene99333:intron | 45.0% |
| !! | AAAAGTGTTGAATTCGCCGC+TGG | - | 57118:11268-11287 | None:intergenic | 45.0% |
| !! | AAAGTGTTGAATTCGCCGCT+GGG | - | 57118:11267-11286 | None:intergenic | 45.0% |
| !! | TCCAGCCTTATTCAAATGGG+GGG | - | 57118:10661-10680 | None:intergenic | 45.0% |
| AAAACGAAGAAGGCCGAGGA+TGG | + | 57118:10816-10835 | MS.gene99333:CDS | 50.0% | |
| AACCCCCCCCCATTTGAATA+AGG | + | 57118:10653-10672 | MS.gene99333:CDS | 50.0% | |
| AATAAAACCCCCCTCCCCTT+CGG | + | 57118:11320-11339 | MS.gene99333:intron | 50.0% | |
| ATCGAAAACGAAGAAGGCCG+AGG | + | 57118:10812-10831 | MS.gene99333:CDS | 50.0% | |
| ATGCCCGCCAAGTTCAGATA+AGG | + | 57118:10685-10704 | MS.gene99333:CDS | 50.0% | |
| CAAGTGGAGAGTGGAGTTAC+GGG | + | 57118:11150-11169 | MS.gene99333:intron | 50.0% | |
| CCAAGTGGAGAGTGGAGTTA+CGG | + | 57118:11149-11168 | MS.gene99333:intron | 50.0% | |
| CTACGGTGCGTGTTATCTGA+AGG | + | 57118:10840-10859 | MS.gene99333:CDS | 50.0% | |
| CTTCAGATAACACGCACCGT+AGG | - | 57118:10842-10861 | None:intergenic | 50.0% | |
| CTTTCGTGTGAATTCCCCAG+CGG | + | 57118:11249-11268 | MS.gene99333:intron | 50.0% | |
| GCTGGCAACAACAGAAAGGA+AGG | + | 57118:10979-10998 | MS.gene99333:CDS | 50.0% | |
| GCTGGGGAATTCACACGAAA+GGG | - | 57118:11250-11269 | None:intergenic | 50.0% | |
| GTGGGCACCTGATATCTATG+AGG | + | 57118:11371-11390 | MS.gene99333:intron | 50.0% | |
| TACTTTCGTTTGGGCCATGG+CGG | - | 57118:11553-11572 | None:intergenic | 50.0% | |
| TGCCACGAGTCAGTCAGTTT+GGG | + | 57118:11955-11974 | MS.gene99333:CDS | 50.0% | |
| TGCCCGCCAAGTTCAGATAA+GGG | + | 57118:10686-10705 | MS.gene99333:CDS | 50.0% | |
| TGCTACAAAAGCCGGCTAAC+GGG | - | 57118:11836-11855 | None:intergenic | 50.0% | |
| TTATTCAAATGGGGGGGGGT+TGG | - | 57118:10654-10673 | None:intergenic | 50.0% | |
| TTCCCGGGCCGAGATATAAA+GGG | - | 57118:10956-10975 | None:intergenic | 50.0% | |
| TTGCCACGAGTCAGTCAGTT+TGG | + | 57118:11954-11973 | MS.gene99333:CDS | 50.0% | |
| TTTCCCGGGCCGAGATATAA+AGG | - | 57118:10957-10976 | None:intergenic | 50.0% | |
| ! | AGAGGCGTGGTTATCTCAAG+TGG | - | 57118:11079-11098 | None:intergenic | 50.0% |
| !! | AAGCGCTGGCAACAACAGAA+AGG | + | 57118:10975-10994 | MS.gene99333:CDS | 50.0% |
| !! | AAGTGTTGAATTCGCCGCTG+GGG | - | 57118:11266-11285 | None:intergenic | 50.0% |
| !! | AGCCTTATTCAAATGGGGGG+GGG | - | 57118:10658-10677 | None:intergenic | 50.0% |
| !! | CAGCCTTATTCAAATGGGGG+GGG | - | 57118:10659-10678 | None:intergenic | 50.0% |
| !! | CCAGCCTTATTCAAATGGGG+GGG | - | 57118:10660-10679 | None:intergenic | 50.0% |
| !!! | AAGGGGAGGGGGGTTTTATT+CGG | - | 57118:11320-11339 | None:intergenic | 50.0% |
| AAGGAATGCTGTAACCGGGG+TGG | - | 57118:11403-11422 | None:intergenic | 55.0% | |
| ACGAAGGCTGCTATCCCAAG+AGG | - | 57118:10927-10946 | None:intergenic | 55.0% | |
| ACGCTAGTCACTACTCCCAC+TGG | - | 57118:11909-11928 | None:intergenic | 55.0% | |
| AGATATGGAGTCCGAAGGGG+AGG | - | 57118:11334-11353 | None:intergenic | 55.0% | |
| AGGAATGCTGTAACCGGGGT+GGG | - | 57118:11402-11421 | None:intergenic | 55.0% | |
| ATATGGAGTCCGAAGGGGAG+GGG | - | 57118:11332-11351 | None:intergenic | 55.0% | |
| CAGTCAGTTTGGGGGACCTA+AGG | + | 57118:11965-11984 | MS.gene99333:CDS | 55.0% | |
| CCACGAGTCAGTCAGTTTGG+GGG | + | 57118:11957-11976 | MS.gene99333:CDS | 55.0% | |
| CCCCCCCATTTGAATAAGGC+TGG | + | 57118:10657-10676 | MS.gene99333:CDS | 55.0% | |
| CCGTAACTCCACTCTCCACT+TGG | - | 57118:11152-11171 | None:intergenic | 55.0% | |
| CGACCGCGGTGGTATGATTT+GGG | + | 57118:10876-10895 | MS.gene99333:CDS | 55.0% | |
| CGCTAGTCACTACTCCCACT+GGG | - | 57118:11908-11927 | None:intergenic | 55.0% | |
| CGCTGGGGAATTCACACGAA+AGG | - | 57118:11251-11270 | None:intergenic | 55.0% | |
| CGGGGGAAGGAAAACGCTTT+CGG | + | 57118:10762-10781 | MS.gene99333:CDS | 55.0% | |
| CTACAAAAGCCGGCTAACGG+GGG | - | 57118:11834-11853 | None:intergenic | 55.0% | |
| CTGCCCTTTATATCTCGGCC+CGG | + | 57118:10950-10969 | MS.gene99333:CDS | 55.0% | |
| GACCGCGGTGGTATGATTTG+GGG | + | 57118:10877-10896 | MS.gene99333:CDS | 55.0% | |
| GAGATAACCACGCCTCTGCT+AGG | + | 57118:11082-11101 | MS.gene99333:intron | 55.0% | |
| GATATGGAGTCCGAAGGGGA+GGG | - | 57118:11333-11352 | None:intergenic | 55.0% | |
| GCCACGAGTCAGTCAGTTTG+GGG | + | 57118:11956-11975 | MS.gene99333:CDS | 55.0% | |
| GCTACAAAAGCCGGCTAACG+GGG | - | 57118:11835-11854 | None:intergenic | 55.0% | |
| GCTAGTCACTACTCCCACTG+GGG | - | 57118:11907-11926 | None:intergenic | 55.0% | |
| GCTTACTTCCTAGCCCCAGT+GGG | + | 57118:11891-11910 | MS.gene99333:CDS | 55.0% | |
| GTAAGCCCCACAACCCAAAG+CGG | - | 57118:11877-11896 | None:intergenic | 55.0% | |
| GTAGGAATACCCCCGTTAGC+CGG | + | 57118:11822-11841 | MS.gene99333:CDS | 55.0% | |
| GTTATAGGTTGTTGGGCGGC+CGG | + | 57118:11927-11946 | MS.gene99333:CDS | 55.0% | |
| TAAGGCAGTTCTCCGTGCAC+CGG | + | 57118:11983-12002 | MS.gene99333:CDS | 55.0% | |
| TCGACCGCGGTGGTATGATT+TGG | + | 57118:10875-10894 | MS.gene99333:CDS | 55.0% | |
| TGCCCTTTATATCTCGGCCC+GGG | + | 57118:10951-10970 | MS.gene99333:CDS | 55.0% | |
| TGTTGTTGCCAGCGCTTTCC+CGG | - | 57118:10972-10991 | None:intergenic | 55.0% | |
| TTACGGGAACAGCCGTCTGA+TGG | + | 57118:11166-11185 | MS.gene99333:intron | 55.0% | |
| TTCTTAGTCGATGGGGCAGC+AGG | + | 57118:11026-11045 | MS.gene99333:CDS | 55.0% | |
| ! | CTGCCCCATCGACTAAGAAG+GGG | - | 57118:11025-11044 | None:intergenic | 55.0% |
| ! | GCTGCCCCATCGACTAAGAA+GGG | - | 57118:11026-11045 | None:intergenic | 55.0% |
| ! | TGCCCCATCGACTAAGAAGG+GGG | - | 57118:11024-11043 | None:intergenic | 55.0% |
| ! | TGCTGCCCCATCGACTAAGA+AGG | - | 57118:11027-11046 | None:intergenic | 55.0% |
| ! | TGGCCAAGAGCGGACCTTTT+TGG | + | 57118:11117-11136 | MS.gene99333:intron | 55.0% |
| !! | ACTGACTCGTGGCAACCTTC+CGG | - | 57118:11949-11968 | None:intergenic | 55.0% |
| !! | TCTTCGCCGCTTTGGGTTGT+GGG | + | 57118:11868-11887 | MS.gene99333:CDS | 55.0% |
| !! | TTCTTCGCCGCTTTGGGTTG+TGG | + | 57118:11867-11886 | MS.gene99333:CDS | 55.0% |
| !!! | AGGGGAGGGGGGTTTTATTC+GGG | - | 57118:11319-11338 | None:intergenic | 55.0% |
| !!! | GGAACACGCTTTTTCGACCG+CGG | + | 57118:10862-10881 | MS.gene99333:CDS | 55.0% |
| AGAAGGCCGAGGATGGCCTA+CGG | + | 57118:10823-10842 | MS.gene99333:CDS | 60.0% | |
| AGGAAAGGCTCGACGAAGGG+AGG | + | 57118:10730-10749 | MS.gene99333:CDS | 60.0% | |
| AGTCGATGGGGCAGCAGGTT+CGG | + | 57118:11031-11050 | MS.gene99333:intron | 60.0% | |
| CCGCCCCCTTCTTAGTCGAT+GGG | + | 57118:11018-11037 | MS.gene99333:CDS | 60.0% | |
| CGCCCCCTTCTTAGTCGATG+GGG | + | 57118:11019-11038 | MS.gene99333:CDS | 60.0% | |
| CGGGCCGAGATATAAAGGGC+AGG | - | 57118:10952-10971 | None:intergenic | 60.0% | |
| CTATGAGGGTTCACCCACCC+CGG | + | 57118:11386-11405 | MS.gene99333:intron | 60.0% | |
| CTGCTAGGCAGCGTGTGGAA+TGG | + | 57118:11097-11116 | MS.gene99333:intron | 60.0% | |
| CTGCTATCCCAAGAGGCCTG+CGG | - | 57118:10920-10939 | None:intergenic | 60.0% | |
| GCGTGTGGAATGGCCAAGAG+CGG | + | 57118:11107-11126 | MS.gene99333:intron | 60.0% | |
| GGAAAGGCTCGACGAAGGGA+GGG | + | 57118:10731-10750 | MS.gene99333:CDS | 60.0% | |
| GGCCCCAAATCATACCACCG+CGG | - | 57118:10882-10901 | None:intergenic | 60.0% | |
| GGCTTACTTCCTAGCCCCAG+TGG | + | 57118:11890-11909 | MS.gene99333:CDS | 60.0% | |
| GGTGCACGGAGAACTGCCTT+AGG | - | 57118:11984-12003 | None:intergenic | 60.0% | |
| GTTGTTGCCAGCGCTTTCCC+GGG | - | 57118:10971-10990 | None:intergenic | 60.0% | |
| TATGGAGTCCGAAGGGGAGG+GGG | - | 57118:11331-11350 | None:intergenic | 60.0% | |
| TCACTACTCCCACTGGGGCT+AGG | - | 57118:11902-11921 | None:intergenic | 60.0% | |
| TCCGCCCCCTTCTTAGTCGA+TGG | + | 57118:11017-11036 | MS.gene99333:CDS | 60.0% | |
| TCGACGAAGGGAGGGAGATG+CGG | + | 57118:10739-10758 | MS.gene99333:CDS | 60.0% | |
| TGCTATCCCAAGAGGCCTGC+GGG | - | 57118:10919-10938 | None:intergenic | 60.0% | |
| TTCCACACGCTGCCTAGCAG+AGG | - | 57118:11097-11116 | None:intergenic | 60.0% | |
| ! | CCCATCGACTAAGAAGGGGG+CGG | - | 57118:11021-11040 | None:intergenic | 60.0% |
| !! | CCCCCAAACTGACTGACTCG+TGG | - | 57118:11960-11979 | None:intergenic | 60.0% |
| !! | CTTCGCCGCTTTGGGTTGTG+GGG | + | 57118:11869-11888 | MS.gene99333:CDS | 60.0% |
| !! | TTTAGGAGCACTGGCCGCCA+TGG | + | 57118:11536-11555 | MS.gene99333:intron | 60.0% |
| !!! | ACACGCTTTTTCGACCGCGG+TGG | + | 57118:10865-10884 | MS.gene99333:CDS | 60.0% |
| !!! | GGGGAGGGGGGTTTTATTCG+GGG | - | 57118:11318-11337 | None:intergenic | 60.0% |
| AAGGGGGCGGACGCACTACA+TGG | - | 57118:11008-11027 | None:intergenic | 65.0% | |
| ACGAAGGGAGGGAGATGCGG+CGG | + | 57118:10742-10761 | MS.gene99333:CDS | 65.0% | |
| ATGGAGTCCGAAGGGGAGGG+GGG | - | 57118:11330-11349 | None:intergenic | 65.0% | |
| CACGCACCGTAGGCCATCCT+CGG | - | 57118:10832-10851 | None:intergenic | 65.0% | |
| TAGGTTGTTGGGCGGCCGGA+AGG | + | 57118:11931-11950 | MS.gene99333:CDS | 65.0% | |
| TATCCCAAGAGGCCTGCGGG+CGG | - | 57118:10916-10935 | None:intergenic | 65.0% | |
| AAGGGAGGGAGATGCGGCGG+GGG | + | 57118:10745-10764 | MS.gene99333:CDS | 70.0% | |
| CACGCTGCCTAGCAGAGGCG+TGG | - | 57118:11092-11111 | None:intergenic | 70.0% | |
| CGAAGGGAGGGAGATGCGGC+GGG | + | 57118:10743-10762 | MS.gene99333:CDS | 70.0% | |
| CGCCTCTGCTAGGCAGCGTG+TGG | + | 57118:11092-11111 | MS.gene99333:intron | 70.0% | |
| GAAGGGAGGGAGATGCGGCG+GGG | + | 57118:10744-10763 | MS.gene99333:CDS | 70.0% | |
| GTTCCGCCCGCAGGCCTCTT+GGG | + | 57118:10910-10929 | MS.gene99333:CDS | 70.0% | |
| ! | ATCTCGGCCCGGGAAAGCGC+TGG | + | 57118:10961-10980 | MS.gene99333:CDS | 70.0% |
| AGAGGCCTGCGGGCGGAACG+CGG | - | 57118:10909-10928 | None:intergenic | 75.0% | |
| CGTTCCGCCCGCAGGCCTCT+TGG | + | 57118:10909-10928 | MS.gene99333:CDS | 75.0% | |
| CTGCGGGCGGAACGCGGAGA+GGG | - | 57118:10903-10922 | None:intergenic | 75.0% | |
| GAGGGAGATGCGGCGGGGGA+AGG | + | 57118:10749-10768 | MS.gene99333:CDS | 75.0% | |
| ! | CCTCTCCGCGTTCCGCCCGC+AGG | + | 57118:10901-10920 | MS.gene99333:CDS | 80.0% |
| ! | CCTGCGGGCGGAACGCGGAG+AGG | - | 57118:10904-10923 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57118 | gene | 10642 | 12013 | 10642 | ID=MS.gene99333 |
| 57118 | mRNA | 10642 | 12013 | 10642 | ID=MS.gene99333.t1;Parent=MS.gene99333 |
| 57118 | exon | 10642 | 11047 | 10642 | ID=MS.gene99333.t1.exon1;Parent=MS.gene99333.t1 |
| 57118 | CDS | 10642 | 11047 | 10642 | ID=cds.MS.gene99333.t1;Parent=MS.gene99333.t1 |
| 57118 | exon | 11541 | 11609 | 11541 | ID=MS.gene99333.t1.exon2;Parent=MS.gene99333.t1 |
| 57118 | CDS | 11541 | 11609 | 11541 | ID=cds.MS.gene99333.t1;Parent=MS.gene99333.t1 |
| 57118 | exon | 11700 | 12013 | 11700 | ID=MS.gene99333.t1.exon3;Parent=MS.gene99333.t1 |
| 57118 | CDS | 11700 | 12013 | 11700 | ID=cds.MS.gene99333.t1;Parent=MS.gene99333.t1 |
| Gene Sequence |
| Protein sequence |
