Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99343.t1 | YP_009237632.1 | 100 | 454 | 0 | 0 | 1 | 454 | 74 | 527 | 3.40E-262 | 913.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99343.t1 | P12786 | 99.6 | 454 | 2 | 0 | 1 | 454 | 74 | 527 | 4.1e-264 | 911.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99343.t1 | A0A120IH40 | 100.0 | 454 | 0 | 0 | 1 | 454 | 74 | 527 | 2.5e-262 | 913.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053931 | MS.gene99343 | -0.801894 | 7.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99343.t1 | MTR_8g106255 | 95.699 | 93 | 4 | 0 | 137 | 229 | 5 | 97 | 4.19e-57 | 184 |
| MS.gene99343.t1 | MTR_0024s0110 | 98.438 | 64 | 1 | 0 | 1 | 64 | 1 | 64 | 6.28e-35 | 128 |
| MS.gene99343.t1 | MTR_0024s0110 | 86.275 | 51 | 7 | 0 | 147 | 197 | 57 | 107 | 2.48e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99343.t1 | ATMG01360 | 94.273 | 454 | 26 | 0 | 1 | 454 | 74 | 527 | 0.0 | 788 |
Find 0 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATATTATTTAATCG+TGG | - | 24089:7107-7126 | MS.gene99343:intergenic | 15.0% |
| !! | GATTAAATAATATTTCATTC+TGG | + | 24089:7108-7127 | MS.gene99343:CDS | 15.0% |
| !! | AAAATTGATAGAACCTAAAA+TGG | - | 24089:7294-7313 | MS.gene99343:intergenic | 20.0% |
| !! | CAGGAATTAAAATATTTAGT+TGG | + | 24089:7765-7784 | MS.gene99343:CDS | 20.0% |
| !!! | ACTAAATATTTTAATTCCTG+TGG | - | 24089:7765-7784 | MS.gene99343:intergenic | 20.0% |
| !!! | CTAAATATTTTAATTCCTGT+GGG | - | 24089:7764-7783 | MS.gene99343:intergenic | 20.0% |
| !!! | TAAATATTTTAATTCCTGTG+GGG | - | 24089:7763-7782 | MS.gene99343:intergenic | 20.0% |
| ! | TCTACATGATACTTATTATG+TGG | + | 24089:7916-7935 | MS.gene99343:CDS | 25.0% |
| ! | TTCCATTATGTACTTTCTAT+GGG | + | 24089:7947-7966 | MS.gene99343:CDS | 25.0% |
| ! | TTTCCATTATGTACTTTCTA+TGG | + | 24089:7946-7965 | MS.gene99343:CDS | 25.0% |
| !!! | ATTTTTGGATCACTTTTTTC+GGG | + | 24089:8056-8075 | MS.gene99343:CDS | 25.0% |
| !!! | CATTTTTGGATCACTTTTTT+CGG | + | 24089:8055-8074 | MS.gene99343:CDS | 25.0% |
| AAAGAGATGCTGGTATAATA+TGG | - | 24089:7507-7526 | MS.gene99343:intergenic | 30.0% | |
| AACGATATGACTTATGATAC+CGG | - | 24089:7576-7595 | MS.gene99343:intergenic | 30.0% | |
| AAGAGATGCTGGTATAATAT+GGG | - | 24089:7506-7525 | MS.gene99343:intergenic | 30.0% | |
| ATTTGCAGGATTTCACTATT+GGG | + | 24089:7985-8004 | MS.gene99343:CDS | 30.0% | |
| CAGTGGAAATAACATAACAA+GGG | + | 24089:8249-8268 | MS.gene99343:CDS | 30.0% | |
| CGAAAAAAGTGATCCAAAAA+TGG | - | 24089:8057-8076 | MS.gene99343:intergenic | 30.0% | |
| GGTTGTATTAAAGTTTCGAT+CGG | - | 24089:7456-7475 | MS.gene99343:intergenic | 30.0% | |
| TATTATACCAGCATCTCTTT+CGG | + | 24089:7507-7526 | MS.gene99343:CDS | 30.0% | |
| TATTTGCAGGATTTCACTAT+TGG | + | 24089:7984-8003 | MS.gene99343:CDS | 30.0% | |
| TCCTGCAAATAAAGCAAAAA+CGG | - | 24089:7975-7994 | MS.gene99343:intergenic | 30.0% | |
| ! | CTTTAGGTCAAATCCATTTT+TGG | + | 24089:8041-8060 | MS.gene99343:CDS | 30.0% |
| ! | TCATATCGTTTCGACTTTTT+CGG | + | 24089:7586-7605 | MS.gene99343:CDS | 30.0% |
| ! | TGTTCTTGGATTTCTTGTTT+GGG | + | 24089:7661-7680 | MS.gene99343:CDS | 30.0% |
| ! | TTCATCTTTTTGTTCACCAT+AGG | + | 24089:7848-7867 | MS.gene99343:CDS | 30.0% |
| !! | ATTTCTAGTCTTCATCTATC+TGG | + | 24089:7260-7279 | MS.gene99343:CDS | 30.0% |
| !!! | TTTTTGGATCACTTTTTTCG+GGG | + | 24089:8057-8076 | MS.gene99343:CDS | 30.0% |
| AAAATTCAACCACACTGGAA+TGG | + | 24089:8296-8315 | MS.gene99343:CDS | 35.0% | |
| AACCCTACAGCAAATAACAT+GGG | - | 24089:7830-7849 | MS.gene99343:intergenic | 35.0% | |
| AAGAACACCTATACTGATCA+TGG | - | 24089:7648-7667 | MS.gene99343:intergenic | 35.0% | |
| ACCGGAAGTGATAATAAAAG+TGG | - | 24089:7404-7423 | MS.gene99343:intergenic | 35.0% | |
| AGAATTGGAATATACACCTC+TGG | - | 24089:7545-7564 | MS.gene99343:intergenic | 35.0% | |
| AGAGATGCTGGTATAATATG+GGG | - | 24089:7505-7524 | MS.gene99343:intergenic | 35.0% | |
| ATAAGAGCCAAAACTGCTAA+GGG | - | 24089:8176-8195 | MS.gene99343:intergenic | 35.0% | |
| ATGATCAGTATAGGTGTTCT+TGG | + | 24089:7647-7666 | MS.gene99343:CDS | 35.0% | |
| CCGGAAGTGATAATAAAAGT+GGG | - | 24089:7403-7422 | MS.gene99343:intergenic | 35.0% | |
| GCAGTGGAAATAACATAACA+AGG | + | 24089:8248-8267 | MS.gene99343:CDS | 35.0% | |
| GCTCATCATATGTTTACTGT+GGG | + | 24089:7683-7702 | MS.gene99343:CDS | 35.0% | |
| GCTCTTATATATCCGTAGTT+GGG | + | 24089:8188-8207 | MS.gene99343:CDS | 35.0% | |
| GGATTTGACCTAAAGTTTCA+GGG | - | 24089:8036-8055 | MS.gene99343:intergenic | 35.0% | |
| GTGTTCTTGGATTTCTTGTT+TGG | + | 24089:7660-7679 | MS.gene99343:CDS | 35.0% | |
| GTTTATGCCATGATCAGTAT+AGG | + | 24089:7638-7657 | MS.gene99343:CDS | 35.0% | |
| TAAGAAATGCATGGGAAAGA+GGG | - | 24089:8092-8111 | MS.gene99343:intergenic | 35.0% | |
| TATAAGAGCCAAAACTGCTA+AGG | - | 24089:8177-8196 | MS.gene99343:intergenic | 35.0% | |
| TATTGGGTGGGTAAAATCTT+TGG | + | 24089:8001-8020 | MS.gene99343:CDS | 35.0% | |
| TCTTTCCCATGCATTTCTTA+GGG | + | 24089:8092-8111 | MS.gene99343:CDS | 35.0% | |
| TGAACAAAATTCAACCACAC+TGG | + | 24089:8291-8310 | MS.gene99343:CDS | 35.0% | |
| TGGATTTGACCTAAAGTTTC+AGG | - | 24089:8037-8056 | MS.gene99343:intergenic | 35.0% | |
| TTTATTATCACTTCCGGTAC+TGG | + | 24089:7406-7425 | MS.gene99343:CDS | 35.0% | |
| ! | ATCTTTTTGTTCACCATAGG+AGG | + | 24089:7851-7870 | MS.gene99343:CDS | 35.0% |
| ! | CTCCCATAGAAAGTACATAA+TGG | - | 24089:7952-7971 | MS.gene99343:intergenic | 35.0% |
| ! | TCTCCAAAAGTATGAAAAGC+TGG | - | 24089:8337-8356 | MS.gene99343:intergenic | 35.0% |
| ! | TCTGGTGTTTCATCCATTTT+AGG | + | 24089:7278-7297 | MS.gene99343:CDS | 35.0% |
| !! | CATATCGTTTCGACTTTTTC+GGG | + | 24089:7587-7606 | MS.gene99343:CDS | 35.0% |
| !! | CCCACTTTTATTATCACTTC+CGG | + | 24089:7400-7419 | MS.gene99343:CDS | 35.0% |
| AAAAGTGGGAATGCTGTTAC+TGG | - | 24089:7389-7408 | MS.gene99342:intergenic | 40.0% | |
| ATAGATCACCCCTATTTGTG+TGG | + | 24089:7357-7376 | MS.gene99343:CDS | 40.0% | |
| ATGCATTTCTTAGGGCTTTC+GGG | + | 24089:8100-8119 | MS.gene99343:CDS | 40.0% | |
| ATGGCTGGTAATACCACTTA+AGG | - | 24089:7216-7235 | MS.gene99343:intergenic | 40.0% | |
| ATTAAGCTCAGCCTTAGTAG+AGG | + | 24089:7157-7176 | MS.gene99343:CDS | 40.0% | |
| CATGCATTTCTTAGGGCTTT+CGG | + | 24089:8099-8118 | MS.gene99343:CDS | 40.0% | |
| CTAAGAAATGCATGGGAAAG+AGG | - | 24089:8093-8112 | MS.gene99343:intergenic | 40.0% | |
| CTACTAAGGCTGAGCTTAAT+AGG | - | 24089:7157-7176 | MS.gene99343:intergenic | 40.0% | |
| CTCTTTCCCATGCATTTCTT+AGG | + | 24089:8091-8110 | MS.gene99343:CDS | 40.0% | |
| CTTAATAGGAGCAAGAGACT+TGG | - | 24089:7143-7162 | MS.gene99343:intergenic | 40.0% | |
| GAAAGCCCTAAGAAATGCAT+GGG | - | 24089:8100-8119 | MS.gene99343:intergenic | 40.0% | |
| GAACCCTACAGCAAATAACA+TGG | - | 24089:7831-7850 | MS.gene99343:intergenic | 40.0% | |
| GATCTATGCATAGTCATTCC+AGG | - | 24089:7344-7363 | MS.gene99343:intergenic | 40.0% | |
| GGCTCATCATATGTTTACTG+TGG | + | 24089:7682-7701 | MS.gene99343:CDS | 40.0% | |
| GGCTCTTATATATCCGTAGT+TGG | + | 24089:8187-8206 | MS.gene99343:CDS | 40.0% | |
| GTAACAATCACTTCAAGCAG+TGG | + | 24089:8232-8251 | MS.gene99343:CDS | 40.0% | |
| GTGTATATTCCAATTCTGCC+TGG | + | 24089:7548-7567 | MS.gene99343:CDS | 40.0% | |
| TCAGGTGCACCTATAAGAAT+CGG | - | 24089:7074-7093 | MS.gene99343:intergenic | 40.0% | |
| TGATAGGTGGATCTGGTAAT+TGG | + | 24089:7042-7061 | MS.gene99343:CDS | 40.0% | |
| TGGCTGGTAATACCACTTAA+GGG | - | 24089:7215-7234 | MS.gene99343:intergenic | 40.0% | |
| TGGTCTGTTCCGATTCTTAT+AGG | + | 24089:7062-7081 | MS.gene99343:CDS | 40.0% | |
| ! | CCAAAAGTATGAAAAGCTGG+AGG | - | 24089:8334-8353 | MS.gene99343:intergenic | 40.0% |
| ! | CCTCCAGCTTTTCATACTTT+TGG | + | 24089:8331-8350 | MS.gene99343:CDS | 40.0% |
| ! | GAATTTTGTTCAACAGCCCA+AGG | - | 24089:8283-8302 | MS.gene99343:intergenic | 40.0% |
| !! | ACACCCATGTTATTTGCTGT+AGG | + | 24089:7824-7843 | MS.gene99343:CDS | 40.0% |
| !! | CACCCATGTTATTTGCTGTA+GGG | + | 24089:7825-7844 | MS.gene99343:CDS | 40.0% |
| !!! | GCCGTTTTTGCTTTATTTGC+AGG | + | 24089:7971-7990 | MS.gene99343:CDS | 40.0% |
| !!! | TTCGACTTTTTCGGGAAAAC+CGG | + | 24089:7595-7614 | MS.gene99343:CDS | 40.0% |
| AACAAGGGCGAACATTCCTT+GGG | + | 24089:8264-8283 | MS.gene99343:CDS | 45.0% | |
| AATAGGAGCAAGAGACTTGG+TGG | - | 24089:7140-7159 | MS.gene99343:intergenic | 45.0% | |
| AATCAACTGCTCCTCCAGAA+TGG | - | 24089:7235-7254 | MS.gene99343:intergenic | 45.0% | |
| AATCGTGGAAATGCCATGTC+AGG | - | 24089:7092-7111 | MS.gene99343:intergenic | 45.0% | |
| ACAACTATCTCCAACATGCG+TGG | + | 24089:7317-7336 | MS.gene99343:CDS | 45.0% | |
| AGCTATGATCATGGTAGCAG+CGG | - | 24089:7738-7757 | MS.gene99343:intergenic | 45.0% | |
| AGTGGTATTACCAGCCATTC+TGG | + | 24089:7218-7237 | MS.gene99343:CDS | 45.0% | |
| ATGTCTAGCCCTGAATTTGC+CGG | - | 24089:7893-7912 | MS.gene99343:intergenic | 45.0% | |
| ATTCCAATTCTGCCTGGATC+CGG | + | 24089:7554-7573 | MS.gene99343:CDS | 45.0% | |
| CAGCATCTCTTTCGGTTCTT+CGG | + | 24089:7515-7534 | MS.gene99343:CDS | 45.0% | |
| CGAAAGCCCTAAGAAATGCA+TGG | - | 24089:8101-8120 | MS.gene99343:intergenic | 45.0% | |
| CGGACATACCCTGAAACTTT+AGG | + | 24089:8025-8044 | MS.gene99343:CDS | 45.0% | |
| CTGGTAATACCACTTAAGGG+CGG | - | 24089:7212-7231 | MS.gene99343:intergenic | 45.0% | |
| GAAACGACGAATCCCAACTA+CGG | - | 24089:8203-8222 | MS.gene99343:intergenic | 45.0% | |
| GAATAGTCCCGGCAAATTCA+GGG | + | 24089:7882-7901 | MS.gene99343:CDS | 45.0% | |
| GATTATCCAGATGCTTACGC+TGG | + | 24089:8142-8161 | MS.gene99343:CDS | 45.0% | |
| GCAGGATTTCACTATTGGGT+GGG | + | 24089:7989-8008 | MS.gene99343:CDS | 45.0% | |
| GCGTAAGCATCTGGATAATC+TGG | - | 24089:8142-8161 | MS.gene99343:intergenic | 45.0% | |
| GGGTGGGTAAAATCTTTGGT+CGG | + | 24089:8005-8024 | MS.gene99343:CDS | 45.0% | |
| TAACAAGGGCGAACATTCCT+TGG | + | 24089:8263-8282 | MS.gene99343:CDS | 45.0% | |
| TAGTTGGATCGCTACCATGT+GGG | + | 24089:7781-7800 | MS.gene99343:CDS | 45.0% | |
| TATTCCAGTGAGTCCTCCTA+TGG | - | 24089:7867-7886 | MS.gene99343:intergenic | 45.0% | |
| TCTTATAGGTGCACCTGACA+TGG | + | 24089:7076-7095 | MS.gene99343:CDS | 45.0% | |
| TGACTTATGATACCGGATCC+AGG | - | 24089:7569-7588 | MS.gene99343:intergenic | 45.0% | |
| TGCAGGATTTCACTATTGGG+TGG | + | 24089:7988-8007 | MS.gene99343:CDS | 45.0% | |
| TGGAACGGACCACACAAATA+GGG | - | 24089:7369-7388 | MS.gene99343:intergenic | 45.0% | |
| TGGAGAACTTCCAGCTATCA+AGG | + | 24089:8351-8370 | MS.gene99343:CDS | 45.0% | |
| TGGGAATGCTGTTACTGGAA+CGG | - | 24089:7384-7403 | MS.gene99343:intergenic | 45.0% | |
| TTAGTTGGATCGCTACCATG+TGG | + | 24089:7780-7799 | MS.gene99343:CDS | 45.0% | |
| ! | TGGAATGCCCTTAGCAGTTT+TGG | + | 24089:8166-8185 | MS.gene99343:CDS | 45.0% |
| !! | CTTTTCGTCTCCTTGATAGC+TGG | - | 24089:8364-8383 | MS.gene99343:intergenic | 45.0% |
| !! | TTTTCGGGAAAACCGGTCTT+CGG | + | 24089:7602-7621 | MS.gene99343:CDS | 45.0% |
| AAACCGGTCTTCGGGTATCT+AGG | + | 24089:7611-7630 | MS.gene99343:CDS | 50.0% | |
| AAGCTCAGCCTTAGTAGAGG+TGG | + | 24089:7160-7179 | MS.gene99343:CDS | 50.0% | |
| AGCTCAGCCTTAGTAGAGGT+GGG | + | 24089:7161-7180 | MS.gene99343:CDS | 50.0% | |
| AGGACTCACTGGAATAGTCC+CGG | + | 24089:7871-7890 | MS.gene99343:CDS | 50.0% | |
| AGTTGGATCGCTACCATGTG+GGG | + | 24089:7782-7801 | MS.gene99343:CDS | 50.0% | |
| ATACCGGATCCAGGCAGAAT+TGG | - | 24089:7560-7579 | MS.gene99343:intergenic | 50.0% | |
| ATCCAGATGCTTACGCTGGA+TGG | + | 24089:8146-8165 | MS.gene99343:CDS | 50.0% | |
| ATGATCATAGCTGTCCCCAC+AGG | + | 24089:7746-7765 | MS.gene99343:CDS | 50.0% | |
| ATGCCTAGATACCCGAAGAC+CGG | - | 24089:7617-7636 | MS.gene99343:intergenic | 50.0% | |
| CGAAGAACCGAAAGAGATGC+TGG | - | 24089:7517-7536 | MS.gene99343:intergenic | 50.0% | |
| CTGGAACGGACCACACAAAT+AGG | - | 24089:7370-7389 | MS.gene99343:intergenic | 50.0% | |
| GGAACGGACCACACAAATAG+GGG | - | 24089:7368-7387 | MS.gene99343:intergenic | 50.0% | |
| GGAATAGTCCCGGCAAATTC+AGG | + | 24089:7881-7900 | MS.gene99343:CDS | 50.0% | |
| GGTATTACCAGCCATTCTGG+AGG | + | 24089:7221-7240 | MS.gene99343:CDS | 50.0% | |
| TGGGATTCGTCGTTTCTTCG+TGG | + | 24089:8207-8226 | MS.gene99343:CDS | 50.0% | |
| TGTCTAGCCCTGAATTTGCC+GGG | - | 24089:7892-7911 | MS.gene99343:intergenic | 50.0% | |
| TGTGGGGACAGCTATGATCA+TGG | - | 24089:7747-7766 | MS.gene99343:intergenic | 50.0% | |
| TTCAACCACACTGGAATGGC+TGG | + | 24089:8300-8319 | MS.gene99343:CDS | 50.0% | |
| TTCACCATAGGAGGACTCAC+TGG | + | 24089:7860-7879 | MS.gene99343:CDS | 50.0% | |
| TTCCATCCAGCGTAAGCATC+TGG | - | 24089:8151-8170 | MS.gene99343:intergenic | 50.0% | |
| TTGTACCAGCCATTCCAGTG+TGG | - | 24089:8308-8327 | MS.gene99343:intergenic | 50.0% | |
| TTGTATAGAACCCCCCCACA+TGG | - | 24089:7798-7817 | MS.gene99343:intergenic | 50.0% | |
| TTTCGGGAAAACCGGTCTTC+GGG | + | 24089:7603-7622 | MS.gene99343:CDS | 50.0% | |
| ! | ACAACCTTTTCTGATCCCGC+AGG | + | 24089:7470-7489 | MS.gene99343:CDS | 50.0% |
| ! | GGATAATCTGGAATGCGACG+TGG | - | 24089:8130-8149 | MS.gene99343:intergenic | 50.0% |
| !! | TATCACTTCCGGTACTGGCA+GGG | + | 24089:7411-7430 | MS.gene99343:CDS | 50.0% |
| !! | TTATCACTTCCGGTACTGGC+AGG | + | 24089:7410-7429 | MS.gene99343:CDS | 50.0% |
| AACTGCTCCTCCAGAATGGC+TGG | - | 24089:7231-7250 | MS.gene99343:intergenic | 55.0% | |
| ACGGTCTATCCGCCCTTAAG+TGG | + | 24089:7200-7219 | MS.gene99343:CDS | 55.0% | |
| ATCTCCAACATGCGTGGACC+TGG | + | 24089:7323-7342 | MS.gene99343:CDS | 55.0% | |
| CATGGTAGCAGCGGTGAAGT+AGG | - | 24089:7729-7748 | MS.gene99343:intergenic | 55.0% | |
| CATTCCAGGTCCACGCATGT+TGG | - | 24089:7330-7349 | MS.gene99343:intergenic | 55.0% | |
| CCAGATCCACCTATCATCGC+CGG | - | 24089:7038-7057 | MS.gene99343:intergenic | 55.0% | |
| GCCTTAGTAGAGGTGGGTAG+CGG | + | 24089:7167-7186 | MS.gene99343:CDS | 55.0% | |
| GGTCTTCGGGTATCTAGGCA+TGG | + | 24089:7616-7635 | MS.gene99343:CDS | 55.0% | |
| GTAATTGCCCCTGCCAGTAC+CGG | - | 24089:7422-7441 | MS.gene99343:intergenic | 55.0% | |
| GTTGGATCGCTACCATGTGG+GGG | + | 24089:7783-7802 | MS.gene99343:CDS | 55.0% | |
| TAGCAGCGGTGAAGTAGGCA+CGG | - | 24089:7724-7743 | MS.gene99343:intergenic | 55.0% | |
| TCGGTTCTTCGGTCATCCAG+AGG | + | 24089:7526-7545 | MS.gene99343:CDS | 55.0% | |
| TTGGATCGCTACCATGTGGG+GGG | + | 24089:7784-7803 | MS.gene99343:CDS | 55.0% | |
| ! | ACCTTTTCTGATCCCGCAGG+AGG | + | 24089:7473-7492 | MS.gene99343:CDS | 55.0% |
| ! | CCTTTTCTGATCCCGCAGGA+GGG | + | 24089:7474-7493 | MS.gene99343:CDS | 55.0% |
| ! | CTTTTCTGATCCCGCAGGAG+GGG | + | 24089:7475-7494 | MS.gene99343:CDS | 55.0% |
| ! | TTTTCTGATCCCGCAGGAGG+GGG | + | 24089:7476-7495 | MS.gene99343:CDS | 55.0% |
| !! | ATCACTTCCGGTACTGGCAG+GGG | + | 24089:7412-7431 | MS.gene99343:CDS | 55.0% |
| AGCAGCGGTGAAGTAGGCAC+GGG | - | 24089:7723-7742 | MS.gene99343:intergenic | 60.0% | |
| CCCTCCTGCGGGATCAGAAA+AGG | - | 24089:7477-7496 | MS.gene99343:intergenic | 60.0% | |
| CCGGCGATGATAGGTGGATC+TGG | + | 24089:7035-7054 | MS.gene99343:CDS | 60.0% | |
| GCCGCTACCCACCTCTACTA+AGG | - | 24089:7171-7190 | MS.gene99343:intergenic | 60.0% | |
| TGGATCGCTACCATGTGGGG+GGG | + | 24089:7785-7804 | MS.gene99343:CDS | 60.0% | |
| ! | TAGAGGTGGGTAGCGGCACT+GGG | + | 24089:7174-7193 | MS.gene99343:CDS | 60.0% |
| TATGGGGTCTCCCCCTCCTG+CGG | - | 24089:7489-7508 | MS.gene99343:intergenic | 65.0% | |
| ! | GTAGAGGTGGGTAGCGGCAC+TGG | + | 24089:7173-7192 | MS.gene99343:CDS | 65.0% |
| ATGGGGTCTCCCCCTCCTGC+GGG | - | 24089:7488-7507 | MS.gene99343:intergenic | 70.0% | |
| ! | AGGTGGGTAGCGGCACTGGG+TGG | + | 24089:7177-7196 | MS.gene99343:CDS | 70.0% |
| ! | GGGTAGCGGCACTGGGTGGA+CGG | + | 24089:7181-7200 | MS.gene99343:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 24089 | gene | 7032 | 8396 | 7032 | ID=MS.gene99343 |
| 24089 | mRNA | 7032 | 8396 | 7032 | ID=MS.gene99343.t1;Parent=MS.gene99343 |
| 24089 | exon | 7032 | 8396 | 7032 | ID=MS.gene99343.t1.exon1;Parent=MS.gene99343.t1 |
| 24089 | CDS | 7032 | 8396 | 7032 | ID=cds.MS.gene99343.t1;Parent=MS.gene99343.t1 |
| Gene Sequence |
| Protein sequence |
