Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99417.t1 | XP_003617053.2 | 94.8 | 1374 | 69 | 2 | 1 | 1374 | 1 | 1372 | 0.00E+00 | 2583.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99417.t1 | Q7G9P4 | 60.0 | 1363 | 506 | 14 | 12 | 1371 | 3 | 1329 | 0.0e+00 | 1603.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99417.t1 | G7KHG0 | 94.8 | 1374 | 69 | 2 | 1 | 1374 | 1 | 1372 | 0.0e+00 | 2583.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene052054 | MS.gene99417 | PPI |
MS.gene78384 | MS.gene99417 | PPI |
MS.gene45551 | MS.gene99417 | PPI |
MS.gene99417 | MS.gene31092 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99417.t1 | MTR_5g087410 | 94.833 | 1374 | 69 | 2 | 1 | 1374 | 1 | 1372 | 0.0 | 2610 |
MS.gene99417.t1 | MTR_5g087410 | 94.132 | 1244 | 71 | 2 | 1 | 1244 | 1 | 1242 | 0.0 | 2333 |
MS.gene99417.t1 | MTR_5g087390 | 77.875 | 1374 | 280 | 9 | 1 | 1371 | 1 | 1353 | 0.0 | 2202 |
MS.gene99417.t1 | MTR_2g098030 | 30.459 | 1415 | 826 | 39 | 3 | 1350 | 10 | 1333 | 1.36e-157 | 511 |
MS.gene99417.t1 | MTR_2g098030 | 30.459 | 1415 | 826 | 39 | 3 | 1350 | 6 | 1329 | 2.17e-157 | 510 |
MS.gene99417.t1 | MTR_2g098030 | 29.842 | 1327 | 774 | 38 | 91 | 1350 | 3 | 1239 | 1.29e-148 | 484 |
MS.gene99417.t1 | MTR_4g119170 | 78.049 | 41 | 8 | 1 | 970 | 1010 | 183 | 222 | 2.91e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99417.t1 | AT3G43600 | 59.621 | 1372 | 490 | 19 | 11 | 1373 | 2 | 1318 | 0.0 | 1648 |
MS.gene99417.t1 | AT2G27150 | 59.883 | 1366 | 509 | 14 | 12 | 1374 | 3 | 1332 | 0.0 | 1630 |
MS.gene99417.t1 | AT2G27150 | 59.883 | 1366 | 509 | 14 | 12 | 1374 | 3 | 1332 | 0.0 | 1630 |
MS.gene99417.t1 | AT1G04580 | 57.695 | 1371 | 526 | 13 | 12 | 1370 | 6 | 1334 | 0.0 | 1611 |
MS.gene99417.t1 | AT5G20960 | 57.990 | 1383 | 544 | 20 | 1 | 1374 | 11 | 1365 | 0.0 | 1600 |
MS.gene99417.t1 | AT5G20960 | 57.990 | 1383 | 544 | 20 | 1 | 1374 | 11 | 1365 | 0.0 | 1600 |
MS.gene99417.t1 | AT2G27150 | 58.546 | 1252 | 480 | 14 | 126 | 1374 | 1 | 1216 | 0.0 | 1470 |
MS.gene99417.t1 | AT2G27150 | 58.546 | 1252 | 480 | 14 | 126 | 1374 | 1 | 1216 | 0.0 | 1470 |
MS.gene99417.t1 | AT2G27150 | 58.480 | 1197 | 459 | 13 | 12 | 1205 | 3 | 1164 | 0.0 | 1380 |
MS.gene99417.t1 | AT2G27150 | 56.787 | 1083 | 430 | 13 | 126 | 1205 | 1 | 1048 | 0.0 | 1221 |
MS.gene99417.t1 | AT4G34890 | 30.382 | 1412 | 820 | 36 | 10 | 1350 | 15 | 1334 | 1.48e-159 | 516 |
MS.gene99417.t1 | AT4G34900 | 30.292 | 1403 | 827 | 37 | 13 | 1350 | 10 | 1326 | 1.86e-152 | 497 |
MS.gene99417.t1 | AT4G34900 | 29.736 | 1325 | 781 | 36 | 91 | 1350 | 3 | 1242 | 9.64e-146 | 477 |
MS.gene99417.t1 | AT4G34900 | 28.689 | 1213 | 740 | 33 | 13 | 1177 | 10 | 1145 | 6.88e-115 | 389 |
MS.gene99417.t1 | AT1G02590 | 66.000 | 50 | 17 | 0 | 1189 | 1238 | 26 | 75 | 1.26e-17 | 79.7 |
Find 270 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTCGGTTTGAACTCTTTC+TGG | 0.085297 | 5.1:-68906749 | MS.gene99417:CDS |
TTGAAATGGGTCAGGGTTTA+TGG | 0.139888 | 5.1:-68903382 | MS.gene99417:CDS |
TTTGAACTCTTTCTGGAAAA+AGG | 0.162836 | 5.1:-68906742 | MS.gene99417:CDS |
ATAACCAATGGTTATTTAAA+TGG | 0.170095 | 5.1:-68905652 | MS.gene99417:CDS |
GCTAACTTGTTCCATATTAA+AGG | 0.170436 | 5.1:+68903581 | None:intergenic |
AGAAGGGTTGGAGGAGGTTT+TGG | 0.201063 | 5.1:-68904310 | MS.gene99417:CDS |
CAACAGCAGCTTCAACATTT+AGG | 0.222150 | 5.1:+68904735 | None:intergenic |
GACATACAGTGTCGGATTTA+AGG | 0.236508 | 5.1:-68903951 | MS.gene99417:CDS |
GTCGAGCAACGGATCATATT+TGG | 0.251503 | 5.1:+68907130 | None:intergenic |
AATATACCATGCCTTTAATA+TGG | 0.251942 | 5.1:-68903592 | MS.gene99417:CDS |
CTCAACCCTGCTGTGGATTT+AGG | 0.252324 | 5.1:-68902588 | MS.gene99417:CDS |
AAGATACTTGAAATGGAAAA+TGG | 0.265000 | 5.1:-68900678 | MS.gene99417:CDS |
TGCCTTACACCTTGAGATAT+TGG | 0.277247 | 5.1:-68903912 | MS.gene99417:CDS |
CCATGATAAGAGCTGTTTCC+TGG | 0.280292 | 5.1:+68900796 | None:intergenic |
AAATGCTGCTTTCCTTGTTC+AGG | 0.290746 | 5.1:-68905953 | MS.gene99417:CDS |
TGCTTCAAAGACTTGCTTCC+CGG | 0.291533 | 5.1:+68905540 | None:intergenic |
AAAGTTGTTGTTAATAATAC+TGG | 0.296448 | 5.1:-68906519 | MS.gene99417:CDS |
GATACTTGTAGGTTGTCTTT+TGG | 0.300306 | 5.1:-68905895 | MS.gene99417:CDS |
GATCAATCAGGGATTGAAAT+TGG | 0.303252 | 5.1:-68906414 | MS.gene99417:CDS |
TAATGGAACTGAAAGTCTTT+TGG | 0.310177 | 5.1:-68903312 | MS.gene99417:CDS |
TAACCATTGGTTATCCTTGC+AGG | 0.315380 | 5.1:+68905661 | None:intergenic |
ATCTCAATACTATTTCTATA+TGG | 0.316951 | 5.1:-68904470 | MS.gene99417:CDS |
TCAATTCATGAAAGATTTGC+TGG | 0.329078 | 5.1:-68906999 | MS.gene99417:CDS |
GTGGGAGGATCTTATTCTTC+AGG | 0.335115 | 5.1:-68903117 | MS.gene99417:intron |
GACTTAACATTTGGAAGAAA+AGG | 0.338524 | 5.1:-68903508 | MS.gene99417:CDS |
TTTACTACAGGCATGGTTGC+AGG | 0.338663 | 5.1:+68900728 | None:intergenic |
TGGTTGGTTGCAGGTGGTTG+TGG | 0.339600 | 5.1:-68907173 | MS.gene99417:intron |
CATGTTGAGAAGTTCTTATC+AGG | 0.342829 | 5.1:-68905838 | MS.gene99417:CDS |
TACTCAGAAACTTGCAGATA+TGG | 0.346961 | 5.1:-68904810 | MS.gene99417:CDS |
TGAAACAAACCTTGATGGTT+TGG | 0.356941 | 5.1:-68902079 | MS.gene99417:CDS |
GGAATGTCTGTTTCCCTCTT+CGG | 0.369549 | 5.1:-68906942 | MS.gene99417:CDS |
TATAAAAGTTGGGCAAGAAT+TGG | 0.371040 | 5.1:-68905233 | MS.gene99417:CDS |
AGCGCACCAGCTATGTTGTT+TGG | 0.371177 | 5.1:+68903851 | None:intergenic |
GGTGCTGCGCTACAAGCTTC+AGG | 0.373464 | 5.1:-68905475 | MS.gene99417:intron |
GCAATCTCTTCGGCAAATAA+AGG | 0.375692 | 5.1:+68905121 | None:intergenic |
GCATAAACCTACTAGTTTAG+AGG | 0.380008 | 5.1:-68906589 | MS.gene99417:CDS |
AAAATCAAAACGGATCAATC+AGG | 0.382852 | 5.1:-68906426 | MS.gene99417:CDS |
TGGAGGAATTGAAATGGGTC+AGG | 0.386950 | 5.1:-68903390 | MS.gene99417:CDS |
CGGGAATGTCTTTACTTGTA+AGG | 0.388052 | 5.1:+68905188 | None:intergenic |
GAGTATGAAACAAACCTTGA+TGG | 0.394038 | 5.1:-68902084 | MS.gene99417:CDS |
AGTTTAACAGACTTAACATT+TGG | 0.403481 | 5.1:-68903517 | MS.gene99417:CDS |
ATACTTGTTATCTTTGCCAT+TGG | 0.403675 | 5.1:+68905253 | None:intergenic |
TGATAGAACTCATTTGCTCT+TGG | 0.404649 | 5.1:+68903141 | None:intergenic |
AACTGCATCTTGCAGATTGA+AGG | 0.406751 | 5.1:-68902144 | MS.gene99417:intron |
GGCATTATTGCGCTAACATC+GGG | 0.408095 | 5.1:+68903872 | None:intergenic |
ACTTAACATTTGGAAGAAAA+GGG | 0.408309 | 5.1:-68903507 | MS.gene99417:CDS |
TCGAAAGACAGATATGATAA+TGG | 0.412341 | 5.1:-68903999 | MS.gene99417:CDS |
TGTTGTTAATAATACTGGTA+TGG | 0.413382 | 5.1:-68906514 | MS.gene99417:CDS |
GGAGCTTTCATACAGGGGTT+AGG | 0.415493 | 5.1:-68902123 | MS.gene99417:CDS |
AAACCATGATAGATACTTGT+AGG | 0.416337 | 5.1:-68905906 | MS.gene99417:CDS |
ACTCTATACAAGCGAATCTT+CGG | 0.416763 | 5.1:-68906052 | MS.gene99417:CDS |
GGCGAGCCAGTCACAAAATC+TGG | 0.417282 | 5.1:-68905496 | MS.gene99417:CDS |
AAGATAACAAGTATAAAAGT+TGG | 0.425154 | 5.1:-68905244 | MS.gene99417:CDS |
TCAGATTCAGCATTTCAGTT+GGG | 0.426549 | 5.1:-68900755 | MS.gene99417:CDS |
TTGTACAAAGATACTTGAAA+TGG | 0.433052 | 5.1:-68900685 | MS.gene99417:CDS |
TGAAGTTCCTCTAAACTAGT+AGG | 0.434049 | 5.1:+68906582 | None:intergenic |
TTATCTTGGTTTCATTGGCA+TGG | 0.439146 | 5.1:+68906541 | None:intergenic |
GAGACACCAGGTGGTGGCTC+AGG | 0.439363 | 5.1:+68906888 | None:intergenic |
GAAGAGGGAAACAGACATTC+CGG | 0.440400 | 5.1:+68906944 | None:intergenic |
TCCGTCAAGTACATCAATTA+TGG | 0.442932 | 5.1:-68902810 | MS.gene99417:CDS |
TCATGGAGCAATTTAGATGA+TGG | 0.443152 | 5.1:-68900779 | MS.gene99417:CDS |
CCCGATGGTGGGGAGAATCT+TGG | 0.444224 | 5.1:-68905169 | MS.gene99417:CDS |
GGTTCTGTTGTTGTTGAAGT+TGG | 0.445396 | 5.1:-68903410 | MS.gene99417:CDS |
CAAATTGGTGATGTATCAAA+AGG | 0.449614 | 5.1:-68904665 | MS.gene99417:CDS |
TTTCCTACTTTATTGTCGTC+CGG | 0.452444 | 5.1:-68905559 | MS.gene99417:CDS |
AGTGGTTGAGGGGTCAACTT+TGG | 0.452566 | 5.1:+68907945 | None:intergenic |
TACTCATTTGCCATCGGCCG+AGG | 0.454064 | 5.1:-68905626 | MS.gene99417:CDS |
AGAGTAATTACAAGAAGGGT+TGG | 0.459243 | 5.1:-68904322 | MS.gene99417:CDS |
ACACTGTATGTCATCTTCAT+TGG | 0.459825 | 5.1:+68903962 | None:intergenic |
TCTTGGAGTTTCTCCTTGAT+CGG | 0.460354 | 5.1:+68903158 | None:intergenic |
GTAATTACAAGAAGGGTTGG+AGG | 0.460905 | 5.1:-68904319 | MS.gene99417:CDS |
AGCAAATGAGTTCTATCAAG+TGG | 0.464230 | 5.1:-68903136 | MS.gene99417:CDS |
AAGCAAGTTGTGCAGCAGTT+AGG | 0.464928 | 5.1:-68903214 | MS.gene99417:CDS |
GGCTAGTGTAGGTGGCAATC+TGG | 0.464931 | 5.1:-68906253 | MS.gene99417:CDS |
GATAAGTATATTGATATAAG+TGG | 0.465422 | 5.1:-68906465 | MS.gene99417:CDS |
TTCTTTGACAGCTGATCTTG+TGG | 0.466308 | 5.1:+68900820 | None:intergenic |
ATTCAAGGTGGATTAACTGC+TGG | 0.473970 | 5.1:-68903251 | MS.gene99417:CDS |
AGTTATGCAATTGTCTTCAT+CGG | 0.474873 | 5.1:+68904423 | None:intergenic |
CCCCTCACTGCAGATCTACT+AGG | 0.475150 | 5.1:+68903770 | None:intergenic |
TATAGTAGAATGTGCATACT+CGG | 0.475558 | 5.1:+68904378 | None:intergenic |
GTTATGCAATTGTCTTCATC+GGG | 0.476854 | 5.1:+68904424 | None:intergenic |
AGTGTCGGATTTAAGGATAA+TGG | 0.477311 | 5.1:-68903944 | MS.gene99417:CDS |
CATATGAGCAAAGTTGCAAC+GGG | 0.477561 | 5.1:-68906291 | MS.gene99417:CDS |
TTTGTGACTGGCTCGCCAAT+CGG | 0.477819 | 5.1:+68905502 | None:intergenic |
TGCAACCATGCCTGTAGTAA+AGG | 0.479131 | 5.1:-68900726 | MS.gene99417:CDS |
CAAATGGCTGCGTTCGCGCT+AGG | 0.479217 | 5.1:-68903347 | MS.gene99417:CDS |
TGAAGTTGGAGGAATTGAAA+TGG | 0.479454 | 5.1:-68903396 | MS.gene99417:CDS |
TGGAGACCGTCTTGCATTTG+TGG | 0.479928 | 5.1:-68905089 | MS.gene99417:intron |
CTTGGAGCAAAGAGTAGATT+CGG | 0.480063 | 5.1:-68905151 | MS.gene99417:CDS |
TGTTAGAGTAATTACAAGAA+GGG | 0.480546 | 5.1:-68904326 | MS.gene99417:CDS |
ACACTACTTTGCAGCATACA+TGG | 0.480941 | 5.1:-68907074 | MS.gene99417:CDS |
GATTGAAGGAGCTTTCATAC+AGG | 0.481294 | 5.1:-68902130 | MS.gene99417:CDS |
GAATTCAAGCAAAGTGGTTG+AGG | 0.481723 | 5.1:+68907933 | None:intergenic |
CCAATGACTTCCTTTACTAC+AGG | 0.483740 | 5.1:+68900716 | None:intergenic |
GCCATAATTGATGTACTTGA+CGG | 0.486793 | 5.1:+68902809 | None:intergenic |
GCAAGTTGATAGCTTCATAC+AGG | 0.487704 | 5.1:+68905794 | None:intergenic |
TCTTTCACTTTGTCTACTCT+CGG | 0.488950 | 5.1:+68903539 | None:intergenic |
ACCTGTCCTAAATCCACAGC+AGG | 0.489394 | 5.1:+68902582 | None:intergenic |
CTTGTATAGAGTTCGATACT+AGG | 0.489900 | 5.1:+68906063 | None:intergenic |
TCCTAGTAGATCTGCAGTGA+GGG | 0.493092 | 5.1:-68903771 | MS.gene99417:CDS |
TGTTCAGGTGTCTCCTTGCA+AGG | 0.493361 | 5.1:-68905938 | MS.gene99417:CDS |
CCAAGATTCTCCCCACCATC+GGG | 0.493500 | 5.1:+68905169 | None:intergenic |
GTTGTTAATAATACTGGTAT+GGG | 0.493709 | 5.1:-68906513 | MS.gene99417:CDS |
CGTGCTTCTCCTCGACCGCT+TGG | 0.495712 | 5.1:-68905994 | MS.gene99417:CDS |
AATTCAAGCAAAGTGGTTGA+GGG | 0.495724 | 5.1:+68907934 | None:intergenic |
GAGGAATAGTGTCTATTGTT+GGG | 0.496222 | 5.1:+68902025 | None:intergenic |
TGAGGAATAGTGTCTATTGT+TGG | 0.496945 | 5.1:+68902024 | None:intergenic |
ACTTCTTGCTGTGGATTCAG+TGG | 0.497124 | 5.1:-68906187 | MS.gene99417:CDS |
CAGATTCAGCATTTCAGTTG+GGG | 0.497145 | 5.1:-68900754 | MS.gene99417:CDS |
GGGAATCTTTGTCGCTGCAC+TGG | 0.499285 | 5.1:-68906828 | MS.gene99417:CDS |
TCTGTTGTTGTTGAAGTTGG+AGG | 0.499663 | 5.1:-68903407 | MS.gene99417:CDS |
ATTACAAGAAGGGTTGGAGG+AGG | 0.500699 | 5.1:-68904316 | MS.gene99417:CDS |
TCACCAACAAATTGCCTACA+TGG | 0.501168 | 5.1:-68905298 | MS.gene99417:CDS |
AGATAACAAGTATAAAAGTT+GGG | 0.501872 | 5.1:-68905243 | MS.gene99417:CDS |
TGAAAGACTAAAACCGATCA+AGG | 0.502499 | 5.1:-68903171 | MS.gene99417:CDS |
CCAGGAAACAGCTCTTATCA+TGG | 0.503297 | 5.1:-68900796 | MS.gene99417:CDS |
GACCAATATCTCAAGGTGTA+AGG | 0.505776 | 5.1:+68903910 | None:intergenic |
AGCGCGTTTCCAAGCGGTCG+AGG | 0.505779 | 5.1:+68905985 | None:intergenic |
GAATTTCTTAAGACTTGTGT+AGG | 0.507795 | 5.1:+68903643 | None:intergenic |
CTAGGTACAGTTCAGTGTAA+TGG | 0.508878 | 5.1:-68903329 | MS.gene99417:CDS |
CCTGTAGTAAAGGAAGTCAT+TGG | 0.508900 | 5.1:-68900716 | MS.gene99417:CDS |
AATGAAACTCAGATAAAACT+TGG | 0.510179 | 5.1:-68904493 | MS.gene99417:intron |
ATGGACAAAGGTGAAACAAA+TGG | 0.511095 | 5.1:-68903363 | MS.gene99417:CDS |
AAGAGGGAAACAGACATTCC+GGG | 0.511760 | 5.1:+68906945 | None:intergenic |
TTCCTACTTTATTGTCGTCC+GGG | 0.512455 | 5.1:-68905558 | MS.gene99417:CDS |
GTTGGTGATGCTCACTGTTG+AGG | 0.513156 | 5.1:+68901983 | None:intergenic |
CAATGCGGTTTCTGTACTCC+CGG | 0.513513 | 5.1:-68906963 | MS.gene99417:CDS |
GCAAAAGAGCAAGTTTCCTT+CGG | 0.514150 | 5.1:-68906223 | MS.gene99417:CDS |
ATATCCATTTAAATAACCAT+TGG | 0.515425 | 5.1:+68905648 | None:intergenic |
GTTAAACTCGGTTGTGGTGA+AGG | 0.515849 | 5.1:-68907883 | MS.gene99417:intron |
CATAGAGTTCTCTCCTCAAA+GGG | 0.518301 | 5.1:-68901961 | MS.gene99417:intron |
GATGGTTTGGCTTTGCAAGA+TGG | 0.520300 | 5.1:-68902066 | MS.gene99417:CDS |
GAAGTTGGAGGAATTGAAAT+GGG | 0.520541 | 5.1:-68903395 | MS.gene99417:CDS |
GTTTGAATGGCTCACATTGG+AGG | 0.520974 | 5.1:-68906142 | MS.gene99417:CDS |
GACTTCCTTTACTACAGGCA+TGG | 0.521295 | 5.1:+68900721 | None:intergenic |
CTTCATTGGATGTCTTCCTC+CGG | 0.523942 | 5.1:+68903976 | None:intergenic |
TCCAAGATTCTCCCCACCAT+CGG | 0.524071 | 5.1:+68905168 | None:intergenic |
ATCAGATTCAGCATTTCAGT+TGG | 0.524166 | 5.1:-68900756 | MS.gene99417:CDS |
CTTGCAAAGCCAAACCATCA+AGG | 0.524239 | 5.1:+68902070 | None:intergenic |
TGTAGGCAATTTGTTGGTGA+TGG | 0.524596 | 5.1:+68905301 | None:intergenic |
TGGCTTTGCAAGATGGAACA+TGG | 0.524920 | 5.1:-68902059 | MS.gene99417:CDS |
AGCTACACTTTCGATGGAAG+TGG | 0.525447 | 5.1:-68903693 | MS.gene99417:CDS |
ATTTCAACATTGAACTGTTG+AGG | 0.525678 | 5.1:+68902006 | None:intergenic |
TTACTACAGGCATGGTTGCA+GGG | 0.527766 | 5.1:+68900729 | None:intergenic |
ATGTTAGAGTAATTACAAGA+AGG | 0.528061 | 5.1:-68904327 | MS.gene99417:CDS |
CCCTGCTGTGGATTTAGGAC+AGG | 0.528247 | 5.1:-68902583 | MS.gene99417:intron |
GATACCTTGAGTATGATTCA+AGG | 0.529444 | 5.1:-68903266 | MS.gene99417:CDS |
ATAGTAGAATGTGCATACTC+GGG | 0.532417 | 5.1:+68904379 | None:intergenic |
AACACATCTAGCAATCTCTT+CGG | 0.533493 | 5.1:+68905111 | None:intergenic |
CTCGCCAATCGGATTATACT+CGG | 0.534737 | 5.1:+68905513 | None:intergenic |
TTCAAGGTGGATTAACTGCT+GGG | 0.535166 | 5.1:-68903250 | MS.gene99417:CDS |
AATGATCCCTGCGTGTCACC+TGG | 0.536476 | 5.1:+68903746 | None:intergenic |
GTACTTGACGGAATTACTAC+CGG | 0.537201 | 5.1:+68902821 | None:intergenic |
CTTGTTCCATATTAAAGGCA+TGG | 0.538302 | 5.1:+68903586 | None:intergenic |
GGGAAGCAAGTCTTTGAAGC+AGG | 0.538409 | 5.1:-68905538 | MS.gene99417:CDS |
GGAGGAATTGAAATGGGTCA+GGG | 0.541924 | 5.1:-68903389 | MS.gene99417:CDS |
AAGAGTGTTAAACTCGGTTG+TGG | 0.542468 | 5.1:-68907889 | MS.gene99417:CDS |
TATAGGCGAGGCTGTATATG+TGG | 0.542716 | 5.1:-68905332 | MS.gene99417:intron |
ATGTCGGAAGCCTCGGCCGA+TGG | 0.542717 | 5.1:+68905616 | None:intergenic |
TTGAGGAGAGAACTCTATGT+TGG | 0.545251 | 5.1:+68901965 | None:intergenic |
ACATAGAGTTCTCTCCTCAA+AGG | 0.547393 | 5.1:-68901962 | MS.gene99417:CDS |
TGGCATTATTGCGCTAACAT+CGG | 0.547988 | 5.1:+68903871 | None:intergenic |
TATAAATATATGCTCCATGT+AGG | 0.548342 | 5.1:+68905284 | None:intergenic |
TTGAGATATTGGTCAACGCT+GGG | 0.548841 | 5.1:-68903901 | MS.gene99417:CDS |
GCTTCAACATTTAGGATAGG+TGG | 0.550292 | 5.1:+68904743 | None:intergenic |
GCTCCATGTAGGCAATTTGT+TGG | 0.550732 | 5.1:+68905295 | None:intergenic |
TCTACTATAGCAAGATGCCT+TGG | 0.550881 | 5.1:-68904364 | MS.gene99417:CDS |
GTAAAGACATTCCCGATGGT+GGG | 0.554298 | 5.1:-68905180 | MS.gene99417:CDS |
GTAACAACAAGTGAAGGCAT+TGG | 0.559162 | 5.1:-68907044 | MS.gene99417:CDS |
TTCAACAACAACAGAACCAT+CGG | 0.560103 | 5.1:+68903415 | None:intergenic |
AAGGGGAATATCTCGAATAC+CGG | 0.560628 | 5.1:-68903489 | MS.gene99417:CDS |
ATAATGCCAAACAACATAGC+TGG | 0.561669 | 5.1:-68903857 | MS.gene99417:CDS |
GATGTTGATATGGAGGATCT+CGG | 0.561827 | 5.1:-68906765 | MS.gene99417:CDS |
AGTAAAGACATTCCCGATGG+TGG | 0.563406 | 5.1:-68905181 | MS.gene99417:CDS |
AATTCTCCTGAGCCACCACC+TGG | 0.563652 | 5.1:-68906894 | MS.gene99417:CDS |
TCCTCTACTCTGTCGAGCAA+CGG | 0.563980 | 5.1:+68907119 | None:intergenic |
ATTGAAGGAGCTTTCATACA+GGG | 0.565150 | 5.1:-68902129 | MS.gene99417:CDS |
CAACCTACAAGTATCTATCA+TGG | 0.566537 | 5.1:+68905903 | None:intergenic |
AAATTCTATGATAATTCTTG+TGG | 0.568554 | 5.1:-68903626 | MS.gene99417:CDS |
TACCTTTCGAGTTTAGCAGT+TGG | 0.568761 | 5.1:-68905721 | MS.gene99417:CDS |
TTTCTCGAGAGACCACCGTT+AGG | 0.569042 | 5.1:-68906117 | MS.gene99417:CDS |
CATAAAAGAGAATCAGAAGC+AGG | 0.569744 | 5.1:-68905596 | MS.gene99417:CDS |
TGTTGCAGCTACACTTTCGA+TGG | 0.570023 | 5.1:-68903699 | MS.gene99417:CDS |
TGACTGGTGCAAAGTTTGAA+TGG | 0.570496 | 5.1:-68906155 | MS.gene99417:CDS |
GATCAGCTGTCAAAGAAGCC+AGG | 0.571499 | 5.1:-68900814 | MS.gene99417:CDS |
GAAGAGATTGCTAGATGTGT+TGG | 0.572808 | 5.1:-68905109 | MS.gene99417:CDS |
AGTTACTATACTTCTTGCTG+TGG | 0.573276 | 5.1:-68906196 | MS.gene99417:CDS |
TGCAGCTGATGTTGATATGG+AGG | 0.573289 | 5.1:-68906772 | MS.gene99417:CDS |
AAGACAGATATGATAATGGC+CGG | 0.573521 | 5.1:-68903995 | MS.gene99417:CDS |
GCAGCTTCAACATTTAGGAT+AGG | 0.575112 | 5.1:+68904740 | None:intergenic |
AAATCAAAACGGATCAATCA+GGG | 0.575948 | 5.1:-68906425 | MS.gene99417:CDS |
TGCAGGCATCAGCAATCGGT+CGG | 0.577811 | 5.1:+68906802 | None:intergenic |
GGCATTGGAAACAGTAAACA+AGG | 0.580439 | 5.1:-68907029 | MS.gene99417:CDS |
TAAAGACATTCCCGATGGTG+GGG | 0.581442 | 5.1:-68905179 | MS.gene99417:CDS |
GTGGAAATAGATCTTCTGAC+AGG | 0.583841 | 5.1:-68902660 | MS.gene99417:CDS |
CTTAACATTTGGAAGAAAAG+GGG | 0.586782 | 5.1:-68903506 | MS.gene99417:CDS |
TCAGTGGTTCACATAATGAC+TGG | 0.586909 | 5.1:-68906171 | MS.gene99417:CDS |
AACTGATGCTGCTAGAAGCA+AGG | 0.589046 | 5.1:+68900850 | None:intergenic |
ACAAAGTCTCAACCCTGCTG+TGG | 0.589598 | 5.1:-68902595 | MS.gene99417:CDS |
GGATTCCATGCTTCTCAATG+CGG | 0.590165 | 5.1:-68906978 | MS.gene99417:CDS |
TACTTGACGGAATTACTACC+GGG | 0.591967 | 5.1:+68902822 | None:intergenic |
TCATATGAGCAAAGTTGCAA+CGG | 0.592799 | 5.1:-68906292 | MS.gene99417:CDS |
ATTCGGAACACGGCTAGTGT+AGG | 0.592880 | 5.1:-68906264 | MS.gene99417:CDS |
CAGGGATCATTCATCGCCGA+AGG | 0.593742 | 5.1:-68903734 | MS.gene99417:CDS |
TATTTATAGTGCAAAACCAA+TGG | 0.594226 | 5.1:-68905269 | MS.gene99417:CDS |
TGTAGGTGGCAATCTGGTGA+TGG | 0.594297 | 5.1:-68906247 | MS.gene99417:CDS |
CGGAACACGGCTAGTGTAGG+TGG | 0.595009 | 5.1:-68906261 | MS.gene99417:CDS |
GTTTCATGAGTATCCTTGCA+AGG | 0.598681 | 5.1:+68905925 | None:intergenic |
TCACAAGATTGTTTCTGCTG+AGG | 0.599599 | 5.1:-68904627 | MS.gene99417:intron |
AACCAACTGCTAAACTCGAA+AGG | 0.600066 | 5.1:+68905719 | None:intergenic |
CTTGAGATATTGGTCAACGC+TGG | 0.600176 | 5.1:-68903902 | MS.gene99417:CDS |
TGGATATACTCATTTGCCAT+CGG | 0.601724 | 5.1:-68905632 | MS.gene99417:CDS |
ATTGGAACTTGATGCAGTGA+GGG | 0.602937 | 5.1:-68905215 | MS.gene99417:CDS |
CGGTCGAGGAGAAGCACGGT+AGG | 0.604039 | 5.1:+68905999 | None:intergenic |
AGAAACCGCATTGAGAAGCA+TGG | 0.605552 | 5.1:+68906973 | None:intergenic |
CTTCTGAGAAACAACACAGT+TGG | 0.606346 | 5.1:-68906611 | MS.gene99417:CDS |
GCAAATGAGTTCTATCAAGT+GGG | 0.606420 | 5.1:-68903135 | MS.gene99417:CDS |
GGCACCGAGTATAATCCGAT+TGG | 0.607478 | 5.1:-68905517 | MS.gene99417:CDS |
ACAGATATTATTTATGACTG+TGG | 0.608611 | 5.1:-68902618 | MS.gene99417:CDS |
TGCAAGGAGACACCTGAACA+AGG | 0.609368 | 5.1:+68905941 | None:intergenic |
ACGTAAGAATTCAAGCAAAG+TGG | 0.611797 | 5.1:+68907927 | None:intergenic |
CAAGATGCAACCTTGACACA+TGG | 0.612100 | 5.1:-68905745 | MS.gene99417:CDS |
GTTGACAAGAGCACCGAAGA+GGG | 0.613007 | 5.1:+68906929 | None:intergenic |
AAAGGCATGGTATATTCAAG+TGG | 0.616955 | 5.1:+68903599 | None:intergenic |
AGATTCAGCATTTCAGTTGG+GGG | 0.618333 | 5.1:-68900753 | MS.gene99417:CDS |
CAGCGTTGACCAATATCTCA+AGG | 0.619845 | 5.1:+68903903 | None:intergenic |
AGTATAGTAACTATATCCGA+AGG | 0.623016 | 5.1:+68906207 | None:intergenic |
TGGTGATGTATCAAAAGGAA+TGG | 0.624656 | 5.1:-68904660 | MS.gene99417:CDS |
TAAGAAAGCGCGTTTCCAAG+CGG | 0.625443 | 5.1:+68905979 | None:intergenic |
CACAGATTGAAAGTCCTGCA+AGG | 0.628076 | 5.1:-68905675 | MS.gene99417:CDS |
TTGAAGGAGCTTTCATACAG+GGG | 0.629840 | 5.1:-68902128 | MS.gene99417:CDS |
TCCGTTGCTCGACAGAGTAG+AGG | 0.630138 | 5.1:-68907120 | MS.gene99417:CDS |
CGAAAGGTAACCATGTGTCA+AGG | 0.630607 | 5.1:+68905735 | None:intergenic |
TCCACCTTGAATCATACTCA+AGG | 0.630733 | 5.1:+68903262 | None:intergenic |
TTCCCGGACGACAATAAAGT+AGG | 0.631349 | 5.1:+68905556 | None:intergenic |
AAAGTTTGAATGGCTCACAT+TGG | 0.635590 | 5.1:-68906145 | MS.gene99417:CDS |
CCTAGTAGATCTGCAGTGAG+GGG | 0.636496 | 5.1:-68903770 | MS.gene99417:CDS |
CAATTCAAGAGTGTTAAACT+CGG | 0.637477 | 5.1:-68907895 | MS.gene99417:CDS |
GGGTCAGGGTTTATGGACAA+AGG | 0.638534 | 5.1:-68903375 | MS.gene99417:CDS |
GATGCTGCTAGAAGCAAGGG+TGG | 0.638559 | 5.1:+68900854 | None:intergenic |
TTGTGATCACGATCGTATCG+AGG | 0.638841 | 5.1:+68906687 | None:intergenic |
TTATGGCGCTGCAGTTAGTG+AGG | 0.639556 | 5.1:-68902793 | MS.gene99417:intron |
AGTCCTGCAAGGATAACCAA+TGG | 0.640489 | 5.1:-68905664 | MS.gene99417:CDS |
ACTGATGCTGCTAGAAGCAA+GGG | 0.642285 | 5.1:+68900851 | None:intergenic |
TGTTCAGTAACAACAAGTGA+AGG | 0.644430 | 5.1:-68907050 | MS.gene99417:CDS |
TTCATCGGGTACAGCGAGCG+CGG | 0.646281 | 5.1:+68904438 | None:intergenic |
AGAACACTTTCAAAACCTAA+CGG | 0.648349 | 5.1:+68906102 | None:intergenic |
CGTTGACAAGAGCACCGAAG+AGG | 0.648990 | 5.1:+68906928 | None:intergenic |
CTTAGTGTAAGACCAACTCC+AGG | 0.651561 | 5.1:-68903455 | MS.gene99417:CDS |
CTAGTAGATCTGCAGTGAGG+GGG | 0.651811 | 5.1:-68903769 | MS.gene99417:CDS |
AATTGGAACTTGATGCAGTG+AGG | 0.651991 | 5.1:-68905216 | MS.gene99417:CDS |
ATTCAAGCAAAGTGGTTGAG+GGG | 0.653939 | 5.1:+68907935 | None:intergenic |
TAGTAGAATGTGCATACTCG+GGG | 0.656429 | 5.1:+68904380 | None:intergenic |
ATCCTAGTAGATCTGCAGTG+AGG | 0.657711 | 5.1:-68903772 | MS.gene99417:CDS |
CAAGCGGTCGAGGAGAAGCA+CGG | 0.658870 | 5.1:+68905995 | None:intergenic |
AATGAGTTCTATCAAGTGGG+AGG | 0.660634 | 5.1:-68903132 | MS.gene99417:CDS |
ATGAAGATGACATACAGTGT+CGG | 0.663769 | 5.1:-68903959 | MS.gene99417:CDS |
TGTGTCAAGGTTGCATCTTG+AGG | 0.666313 | 5.1:+68905748 | None:intergenic |
ACCTTGAGTATGATTCAAGG+TGG | 0.671723 | 5.1:-68903263 | MS.gene99417:CDS |
TGCATCTTGAGGTGTAATAG+CGG | 0.673803 | 5.1:+68905759 | None:intergenic |
AACTCACCACAAATGCAAGA+CGG | 0.675674 | 5.1:+68905083 | None:intergenic |
GGATATTACAAAGATAAACA+AGG | 0.678422 | 5.1:-68906492 | MS.gene99417:CDS |
ACACTAAGCTCATACAACAC+CGG | 0.688754 | 5.1:+68903470 | None:intergenic |
ACAAGTAAAGACATTCCCGA+TGG | 0.691237 | 5.1:-68905184 | MS.gene99417:CDS |
TAGTGTGAGACAAGAGCTCG+CGG | 0.697619 | 5.1:+68907091 | None:intergenic |
ACAGATATGATAATGGCCGG+AGG | 0.700168 | 5.1:-68903992 | MS.gene99417:CDS |
CCTGTCCTAAATCCACAGCA+GGG | 0.710740 | 5.1:+68902583 | None:intergenic |
AAGACTGTAATCAACAACAG+AGG | 0.724599 | 5.1:+68904778 | None:intergenic |
AAGCACGGTAGGTTTCAAAG+AGG | 0.726582 | 5.1:+68906010 | None:intergenic |
ACACTTTCAAAACCTAACGG+TGG | 0.726815 | 5.1:+68906105 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 68900667 | 68908037 | 68900667 | ID=MS.gene99417 |
chr5.1 | mRNA | 68900667 | 68908037 | 68900667 | ID=MS.gene99417.t1;Parent=MS.gene99417 |
chr5.1 | exon | 68907884 | 68908037 | 68907884 | ID=MS.gene99417.t1.exon1;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68907884 | 68908037 | 68907884 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68905476 | 68907182 | 68905476 | ID=MS.gene99417.t1.exon2;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68905476 | 68907182 | 68905476 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68905090 | 68905349 | 68905090 | ID=MS.gene99417.t1.exon3;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68905090 | 68905349 | 68905090 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68904628 | 68904840 | 68904628 | ID=MS.gene99417.t1.exon4;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68904628 | 68904840 | 68904628 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68904285 | 68904503 | 68904285 | ID=MS.gene99417.t1.exon5;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68904285 | 68904503 | 68904285 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68903118 | 68904083 | 68903118 | ID=MS.gene99417.t1.exon6;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68903118 | 68904083 | 68903118 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68902794 | 68902889 | 68902794 | ID=MS.gene99417.t1.exon7;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68902794 | 68902889 | 68902794 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68902584 | 68902682 | 68902584 | ID=MS.gene99417.t1.exon8;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68902584 | 68902682 | 68902584 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68901962 | 68902151 | 68901962 | ID=MS.gene99417.t1.exon9;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68901962 | 68902151 | 68901962 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
chr5.1 | exon | 68900667 | 68900887 | 68900667 | ID=MS.gene99417.t1.exon10;Parent=MS.gene99417.t1 |
chr5.1 | CDS | 68900667 | 68900887 | 68900667 | ID=cds.MS.gene99417.t1;Parent=MS.gene99417.t1 |
Gene Sequence |
Protein sequence |