AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99623

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99623.t1 MTR_7g062120 95.687 742 32 0 1 742 1 742 0.0 1454
MS.gene99623.t1 MTR_4g064160 48.613 685 325 8 60 739 21 683 0.0 617
MS.gene99623.t1 MTR_2g097410 44.875 722 331 15 53 739 51 740 0.0 560
MS.gene99623.t1 MTR_2g097467 43.924 683 297 12 68 739 46 653 0.0 544
MS.gene99623.t1 MTR_4g064150 44.832 716 332 18 39 739 65 732 0.0 544
MS.gene99623.t1 MTR_2g097473 44.477 679 299 14 68 739 46 653 0.0 536
MS.gene99623.t1 MTR_2g097463 44.122 689 298 18 63 739 41 654 1.05e-180 531
MS.gene99623.t1 MTR_4g064120 44.100 678 295 17 66 738 26 624 3.29e-180 529
MS.gene99623.t1 MTR_4g064180 43.215 678 301 16 66 738 26 624 2.02e-175 516
MS.gene99623.t1 MTR_4g064200 52.242 513 229 6 237 739 143 649 5.16e-175 516
MS.gene99623.t1 MTR_2g097310 51.208 414 191 5 333 739 228 637 4.11e-152 457
MS.gene99623.t1 MTR_2g097350 51.202 416 192 5 331 739 228 639 3.88e-149 449
MS.gene99623.t1 MTR_2g097390 50.721 416 194 5 331 739 229 640 6.32e-147 444
MS.gene99623.t1 MTR_2g097380 49.176 364 152 4 377 739 229 560 5.02e-125 385
MS.gene99623.t1 MTR_5g097480 32.976 373 249 1 368 740 173 544 4.53e-66 228
MS.gene99623.t1 MTR_2g026250 29.867 375 261 2 367 740 223 596 5.22e-60 213
MS.gene99623.t1 MTR_4g133660 30.481 374 258 2 367 739 170 542 6.60e-60 212
MS.gene99623.t1 MTR_1g029420 31.806 371 252 1 370 740 223 592 8.40e-60 213
MS.gene99623.t1 MTR_3g056110 30.053 376 256 4 368 740 171 542 5.40e-59 209
MS.gene99623.t1 MTR_7g027190 29.895 475 285 10 283 740 230 673 1.96e-58 210
MS.gene99623.t1 MTR_2g082090 30.645 372 257 1 368 739 208 578 3.41e-58 207
MS.gene99623.t1 MTR_5g094450 29.949 394 262 7 357 740 143 532 7.70e-57 203
MS.gene99623.t1 MTR_3g089055 29.919 371 259 1 370 740 201 570 1.27e-55 200
MS.gene99623.t1 MTR_3g089055 29.919 371 259 1 370 740 196 565 1.33e-55 200
MS.gene99623.t1 MTR_4g104020 29.610 385 248 6 369 740 146 520 7.39e-50 183
MS.gene99623.t1 MTR_3g065980 30.789 393 236 8 367 741 167 541 5.15e-48 178
MS.gene99623.t1 MTR_7g074650 30.137 365 241 5 376 740 442 792 2.40e-47 180
MS.gene99623.t1 MTR_8g442410 30.326 399 244 8 362 742 145 527 5.98e-47 175
MS.gene99623.t1 MTR_4g076140 26.636 428 249 4 372 740 48 469 7.01e-45 168
MS.gene99623.t1 MTR_3g022830 27.273 418 247 6 373 740 26 436 3.38e-41 157
MS.gene99623.t1 MTR_2g034260 28.244 393 260 10 363 741 201 585 1.04e-37 149
MS.gene99623.t1 MTR_2g089100 28.501 407 242 10 369 739 49 442 3.34e-37 145
MS.gene99623.t1 MTR_4g076020 27.926 376 226 9 376 740 88 429 4.20e-36 142
MS.gene99623.t1 MTR_2g034250 26.835 395 264 9 363 741 201 586 5.16e-36 144
MS.gene99623.t1 MTR_4g102790 25.065 383 267 7 368 739 288 661 1.13e-35 144
MS.gene99623.t1 MTR_7g109580 29.487 390 242 10 367 741 184 555 1.54e-35 142
MS.gene99623.t1 MTR_1g069725 27.512 418 263 14 342 739 65 462 2.42e-35 140
MS.gene99623.t1 MTR_4g097080 26.316 380 264 8 370 740 131 503 3.73e-35 140
MS.gene99623.t1 MTR_1g096030 28.141 398 239 14 372 740 80 459 6.12e-34 136
MS.gene99623.t1 MTR_2g034280 25.831 391 270 8 363 741 194 576 2.85e-32 132
MS.gene99623.t1 MTR_1g086970 26.598 391 259 13 367 741 101 479 1.66e-31 129
MS.gene99623.t1 MTR_4g077760 26.836 354 241 8 391 740 216 555 2.80e-31 129
MS.gene99623.t1 MTR_5g015490 26.302 384 261 6 372 740 114 490 2.83e-31 129
MS.gene99623.t1 MTR_3g072710 27.688 372 229 10 391 739 145 499 5.35e-27 116
MS.gene99623.t1 MTR_7g057230 25.326 383 249 10 373 739 295 656 6.04e-27 117
MS.gene99623.t1 MTR_5g009080 31.019 216 139 3 372 583 56 265 6.08e-26 112
MS.gene99623.t1 MTR_5g009080 29.252 147 104 0 594 740 332 478 6.80e-17 84.7
MS.gene99623.t1 MTR_6g047750 24.346 382 260 11 373 740 296 662 2.46e-24 108
MS.gene99623.t1 MTR_5g058860 24.877 406 247 13 369 739 114 496 8.35e-24 106
MS.gene99623.t1 MTR_2g099110 28.000 300 202 5 372 666 74 364 1.28e-23 105
MS.gene99623.t1 MTR_5g015950 21.823 417 277 8 369 739 32 445 1.02e-22 102
MS.gene99623.t1 MTR_3g053270 21.823 417 277 8 369 739 32 445 1.02e-22 102
MS.gene99623.t1 MTR_4g095500 23.981 417 266 10 369 739 56 467 2.99e-22 101
MS.gene99623.t1 MTR_8g093070 25.693 397 250 16 360 739 127 495 6.92e-22 100
MS.gene99623.t1 MTR_8g020840 24.499 449 283 15 320 741 130 549 3.47e-19 92.4
MS.gene99623.t1 MTR_0092s0100 22.751 378 260 6 373 740 376 731 2.42e-17 87.0
MS.gene99623.t1 MTR_0092s0100 22.751 378 260 6 373 740 373 728 2.52e-17 87.0
MS.gene99623.t1 MTR_4g026485 21.463 410 272 11 348 740 248 624 6.44e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99623.t1 AT2G37650 52.339 684 272 11 68 740 73 713 0.0 658
MS.gene99623.t1 AT2G37650 52.339 684 272 11 68 740 61 701 0.0 657
MS.gene99623.t1 AT1G07530 45.714 770 369 16 7 739 7 764 0.0 610
MS.gene99623.t1 AT2G29060 45.601 682 280 13 69 739 53 654 0.0 564
MS.gene99623.t1 AT2G29060 44.838 678 328 8 69 739 53 691 0.0 563
MS.gene99623.t1 AT1G07520 40.883 702 347 16 52 739 45 692 1.42e-157 473
MS.gene99623.t1 AT1G07520 40.883 702 347 16 52 739 46 693 1.43e-157 473
MS.gene99623.t1 AT2G29065 45.645 574 268 10 178 739 86 627 1.44e-157 471
MS.gene99623.t1 AT1G07520 46.098 551 250 12 203 739 11 528 2.03e-153 457
MS.gene99623.t1 AT1G07520 46.098 551 250 12 203 739 11 528 2.03e-153 457
MS.gene99623.t1 AT5G59450 46.934 473 238 5 275 742 136 600 1.69e-151 454
MS.gene99623.t1 AT3G46600 51.629 399 190 2 346 742 152 549 2.19e-141 426
MS.gene99623.t1 AT3G46600 51.629 399 190 2 346 742 184 581 2.40e-141 427
MS.gene99623.t1 AT3G46600 43.182 88 41 2 42 120 19 106 5.61e-11 66.2
MS.gene99623.t1 AT3G46600 52.941 374 175 1 369 742 1 373 1.69e-139 415
MS.gene99623.t1 AT4G17230 33.690 374 247 1 367 740 153 525 2.21e-63 221
MS.gene99623.t1 AT4G17230 33.690 374 247 1 367 740 153 525 2.21e-63 221
MS.gene99623.t1 AT1G50600 32.976 373 249 1 368 740 155 526 3.30e-63 220
MS.gene99623.t1 AT5G48150 31.818 374 253 2 368 740 118 490 4.26e-63 219
MS.gene99623.t1 AT5G48150 31.818 374 253 2 368 740 118 490 4.26e-63 219
MS.gene99623.t1 AT5G48150 31.818 374 253 2 368 740 118 490 4.26e-63 219
MS.gene99623.t1 AT5G48150 31.818 374 253 2 368 740 118 490 4.26e-63 219
MS.gene99623.t1 AT1G50600 32.976 373 249 1 368 740 226 597 1.79e-62 220
MS.gene99623.t1 AT1G50600 32.976 373 249 1 368 740 230 601 2.18e-62 220
MS.gene99623.t1 AT2G04890 31.099 373 249 2 368 740 49 413 6.32e-61 211
MS.gene99623.t1 AT1G21450 29.765 383 260 4 364 740 214 593 3.83e-54 197
MS.gene99623.t1 AT1G14920 33.075 387 226 11 367 742 167 531 3.94e-50 184
MS.gene99623.t1 AT3G03450 31.620 389 234 9 367 742 178 547 4.63e-50 184
MS.gene99623.t1 AT3G54220 30.097 412 268 7 334 739 252 649 5.80e-48 180
MS.gene99623.t1 AT1G66350 32.527 372 228 10 373 741 156 507 3.15e-47 176
MS.gene99623.t1 AT2G01570 31.865 386 232 12 367 742 219 583 3.83e-47 177
MS.gene99623.t1 AT5G17490 30.412 388 234 11 367 742 155 518 1.91e-45 171
MS.gene99623.t1 AT1G50420 25.175 429 255 5 372 740 57 479 3.55e-43 163
MS.gene99623.t1 AT5G66770 27.493 371 253 8 376 740 224 584 1.35e-40 158
MS.gene99623.t1 AT5G41920 27.981 411 264 10 342 740 10 400 8.66e-37 143
MS.gene99623.t1 AT4G37650 25.320 391 265 8 371 740 145 529 4.68e-35 140
MS.gene99623.t1 AT3G50650 25.070 359 252 5 390 740 193 542 8.59e-33 134
MS.gene99623.t1 AT5G52510 24.870 386 264 7 370 740 266 640 9.49e-33 135
MS.gene99623.t1 AT1G63100 26.409 337 236 5 368 700 248 576 4.17e-31 130
MS.gene99623.t1 AT1G63100 26.911 327 227 5 368 690 273 591 6.26e-31 129
MS.gene99623.t1 AT1G55580 25.121 414 259 9 369 740 41 445 7.69e-27 114
MS.gene99623.t1 AT3G49950 26.667 390 258 10 369 739 27 407 1.23e-23 104
MS.gene99623.t1 AT4G08250 25.128 390 258 11 369 739 102 476 3.15e-21 98.2
MS.gene99623.t1 AT3G13840 25.000 416 268 14 344 740 120 510 5.84e-19 91.3

Find 152 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTAAAGGGTATTT+TGG 0.117928 7.1:-39447276 MS.gene99623:CDS
TGATTAGTCCTTTATAAATT+TGG 0.135271 7.1:+39446005 None:intergenic
TTCATTCACGGTATTGTTAA+TGG 0.176706 7.1:-39445470 MS.gene99623:CDS
CTTTCTTTGTTACTCGATTT+AGG 0.193366 7.1:-39445433 MS.gene99623:CDS
ACCTTGCAGCTTGCCCTTTC+CGG 0.197040 7.1:-39445937 MS.gene99623:CDS
GTTTCCGCGCAAAGAATTAT+TGG 0.201496 7.1:+39446810 None:intergenic
CTAATTGAGAAAGAGATATT+TGG 0.206202 7.1:-39445335 MS.gene99623:CDS
TTTGATCAAAGTATAGAATT+TGG 0.228289 7.1:-39447180 MS.gene99623:CDS
ACTTTCCACAACCTGGTTTC+AGG 0.235016 7.1:-39445745 MS.gene99623:CDS
TTTCTTTGTTACTCGATTTA+GGG 0.239290 7.1:-39445432 MS.gene99623:CDS
ATGATGGATCAAAATCTTAA+AGG 0.262809 7.1:-39447285 MS.gene99623:CDS
AACAAAGAAAGGAGCATTAA+AGG 0.262853 7.1:+39445445 None:intergenic
CAGAATCAAAGATTTGAAAA+TGG 0.277754 7.1:-39447207 MS.gene99623:CDS
ATAGACTTTGGTATCCTCTA+TGG 0.301006 7.1:-39445845 MS.gene99623:CDS
ACGTTCCTGCTTCATAGTTT+AGG 0.305136 7.1:-39446346 MS.gene99623:CDS
CATCCTTATGGAAGAAGATA+TGG 0.310452 7.1:-39447037 MS.gene99623:CDS
GCTAATAAGTTTCTCCCTAA+TGG 0.314940 7.1:-39446598 MS.gene99623:CDS
GAAAGAGGCCATTTCCATTA+GGG 0.330219 7.1:+39446584 None:intergenic
AGACAGCACTCAAACCCTTT+TGG 0.339731 7.1:-39446097 MS.gene99623:CDS
CGATGGCCTTGAGGCACGTT+TGG 0.343289 7.1:-39446041 MS.gene99623:CDS
TGAAAGAGGCCATTTCCATT+AGG 0.351396 7.1:+39446583 None:intergenic
GAAGCTCAATTTCCTCATAA+TGG 0.356048 7.1:-39446781 MS.gene99623:CDS
AATCTTTGATTCTGAAGAAC+AGG 0.366185 7.1:+39447216 None:intergenic
ATACCGTGAATGAATATATT+CGG 0.372722 7.1:+39445479 None:intergenic
TTACCGTGGTAGAAACTTGC+TGG 0.375708 7.1:-39445564 MS.gene99623:CDS
TTACATCAATAACATCCTTA+TGG 0.377855 7.1:-39447049 MS.gene99623:CDS
TATCGTGCCTCGCGAGGATT+GGG 0.380868 7.1:-39445366 MS.gene99623:CDS
CTTCCATATCTTCTTCCATA+AGG 0.384242 7.1:+39447034 None:intergenic
AAGTACCCGGTTTCGCCGTT+AGG 0.384939 7.1:-39446937 MS.gene99623:CDS
CAAATTCGTATTCTTCGAGC+TGG 0.390469 7.1:-39445239 MS.gene99623:CDS
TTTCCTTGAAAACCATTATG+AGG 0.391556 7.1:+39446769 None:intergenic
GGCCTTGAGGCACGTTTGGC+TGG 0.393996 7.1:-39446037 MS.gene99623:CDS
ACAGGAAGCCAAATTTATAA+AGG 0.398179 7.1:-39446013 MS.gene99623:CDS
TGATGGATCAAAATCTTAAA+GGG 0.398790 7.1:-39447284 MS.gene99623:CDS
TAATTGAGAAAGAGATATTT+GGG 0.399383 7.1:-39445334 MS.gene99623:CDS
CGAAGTTTCGGCGGTCCTCC+TGG 0.408211 7.1:+39445782 None:intergenic
TTTGTTGCGTTCAACTATGA+TGG 0.408586 7.1:-39446371 MS.gene99623:CDS
TCGTTTACGCACTTTCTTGT+TGG 0.408613 7.1:-39445088 MS.gene99623:CDS
AGACAAAACTAGTCATCTTC+CGG 0.409694 7.1:+39445918 None:intergenic
GTGTGGATGCTTCCTTCCCT+TGG 0.410286 7.1:+39446456 None:intergenic
GCAAAGATTGATTCCTCAAC+TGG 0.410610 7.1:+39447238 None:intergenic
CGCTGATTTCCATCTCCAAA+AGG 0.411695 7.1:+39446082 None:intergenic
GTTTCACTACTAAGACTTTG+AGG 0.420199 7.1:+39446910 None:intergenic
ATTCCTGTGATCCGAAGTTT+CGG 0.426274 7.1:+39445770 None:intergenic
AAGTTTCTCCCTAATGGAAA+TGG 0.436441 7.1:-39446592 MS.gene99623:CDS
CAATCTTGAGTTCCTCAAGC+TGG 0.440153 7.1:+39445618 None:intergenic
GCTATGGCATTATACTCAAA+TGG 0.441312 7.1:+39445659 None:intergenic
GTATCGTGCCTCGCGAGGAT+TGG 0.444992 7.1:-39445367 MS.gene99623:CDS
TAGAGAGGCCAGAGACATAT+CGG 0.445574 7.1:-39445268 MS.gene99623:CDS
TATAGAAACCGGTTCGCGCT+TGG 0.446581 7.1:-39445708 MS.gene99623:CDS
GAGGCACGTTTGGCTGGTAC+AGG 0.458499 7.1:-39446031 MS.gene99623:CDS
TTCTCCAGACAGTGATCTAC+AGG 0.458533 7.1:-39446680 MS.gene99623:CDS
AAAGAGCAGTGGAGAAAGTA+AGG 0.458900 7.1:-39445181 MS.gene99623:CDS
AGGGTCCATGTTATAGACTT+TGG 0.460977 7.1:-39445857 MS.gene99623:CDS
TTCTTTGCGCGGAAACTTGA+GGG 0.461428 7.1:-39446803 MS.gene99623:CDS
AAATCCTCAGTTTGATAAGA+AGG 0.464246 7.1:-39445508 MS.gene99623:CDS
AACTAGTCATCTTCCGGAAA+GGG 0.465913 7.1:+39445924 None:intergenic
ATACGCTGCCAAGCGCGAAC+CGG 0.466569 7.1:+39445700 None:intergenic
ATCGAGGTCGTTGTTGAAGA+AGG 0.474514 7.1:+39447129 None:intergenic
TGGTTATTACAAGGCTGGAA+AGG 0.474852 7.1:-39445116 MS.gene99623:CDS
TGCCACTGCCGATATGTCTC+TGG 0.476686 7.1:+39445260 None:intergenic
CTAAATCGAGTAACAAAGAA+AGG 0.477974 7.1:+39445434 None:intergenic
GTAGCTTTCGATGTATTACT+TGG 0.479635 7.1:+39446256 None:intergenic
CAGGAGGACCGCCGAAACTT+CGG 0.485753 7.1:-39445781 MS.gene99623:CDS
GAACGATGAACTATCGGTTA+AGG 0.487624 7.1:-39446515 MS.gene99623:CDS
GTTTCTATAATTCTCTCTGC+AGG 0.493560 7.1:+39445722 None:intergenic
AAGTACCGTCGAAGGGACTC+TGG 0.494014 7.1:-39446704 MS.gene99623:CDS
GCAAGTGGTTATTACAAGGC+TGG 0.495209 7.1:-39445121 MS.gene99623:CDS
TTCCTTCCCTTGGATCCAAA+AGG 0.496106 7.1:+39446466 None:intergenic
GAAAGTCTTTGTATGAAAGT+AGG 0.500451 7.1:+39445812 None:intergenic
CATCGAAAGCTACGACTAGT+AGG 0.501175 7.1:-39446246 MS.gene99623:CDS
CTCTCTGCAGGCCTGAAACC+AGG 0.501776 7.1:+39445734 None:intergenic
GTTGAAGAAGGTGTGCAATC+AGG 0.502708 7.1:+39447141 None:intergenic
TTTGTATGAAAGTAGGCCAT+TGG 0.503852 7.1:+39445819 None:intergenic
AAACCGAATATATTCATTCA+CGG 0.506223 7.1:-39445482 MS.gene99623:CDS
GTATCCTCTATGGTTTCCAA+TGG 0.508744 7.1:-39445835 MS.gene99623:CDS
GCAGAGAGAATTATAGAAAC+CGG 0.512723 7.1:-39445719 MS.gene99623:CDS
ATTCTTTGCGCGGAAACTTG+AGG 0.514689 7.1:-39446804 MS.gene99623:CDS
GGTTATTACAAGGCTGGAAA+GGG 0.517720 7.1:-39445115 MS.gene99623:CDS
GCAGGCCTGAAACCAGGTTG+TGG 0.523298 7.1:+39445740 None:intergenic
GCTGATTTCCATCTCCAAAA+GGG 0.524319 7.1:+39446083 None:intergenic
CATCTCCTAAACTATGAAGC+AGG 0.528029 7.1:+39446341 None:intergenic
CCGCCGAAACTTCGGATCAC+AGG 0.530115 7.1:-39445773 MS.gene99623:CDS
GAAACCTGTAGATCACTGTC+TGG 0.531985 7.1:+39446676 None:intergenic
GGAATAGACTTTCCACAACC+TGG 0.535328 7.1:-39445752 MS.gene99623:CDS
TGAGAAAGAGATATTTGGGA+AGG 0.540140 7.1:-39445330 MS.gene99623:CDS
TCAGAAAATTCACACTCCTC+AGG 0.542538 7.1:+39447084 None:intergenic
AGGGAAGGAAGCATCCACAC+GGG 0.542776 7.1:-39446453 MS.gene99623:CDS
CTGTGGTAGTCGACAGTCCA+AGG 0.548946 7.1:-39445535 MS.gene99623:CDS
TATGGTACTTGTGTTGATGA+TGG 0.553757 7.1:-39446853 MS.gene99623:CDS
TTGGCTCATATATTTGCCGA+TGG 0.554111 7.1:-39446058 MS.gene99623:CDS
AAATTCGTATTCTTCGAGCT+GGG 0.554272 7.1:-39445238 MS.gene99623:CDS
AATTCACACTCCTCAGGAGA+AGG 0.554993 7.1:+39447090 None:intergenic
TGAAAGTATCGTGCCTCGCG+AGG 0.557299 7.1:-39445372 MS.gene99623:CDS
TGGAGATGGAAATCAGCGGT+TGG 0.560835 7.1:-39446077 MS.gene99623:CDS
GGGAAGGAAGCATCCACACG+GGG 0.560901 7.1:-39446452 MS.gene99623:CDS
CTTGAGTTCCTCAAGCTGGA+TGG 0.564439 7.1:+39445622 None:intergenic
AAGCTACGACTAGTAGGAAA+GGG 0.568799 7.1:-39446240 MS.gene99623:CDS
GGCCAGAGACATATCGGCAG+TGG 0.569068 7.1:-39445262 MS.gene99623:CDS
AGTGATGAACGATGAACTAT+CGG 0.570283 7.1:-39446521 MS.gene99623:CDS
TGTTCTTTGTGCACAAGCTG+TGG 0.571979 7.1:-39446164 MS.gene99623:CDS
AAACTAGTCATCTTCCGGAA+AGG 0.572499 7.1:+39445923 None:intergenic
TCCGGAAAGGGCAAGCTGCA+AGG 0.577684 7.1:+39445936 None:intergenic
TTCCTCATGTGTCGAAATCG+AGG 0.578452 7.1:+39447113 None:intergenic
CAAACGTGCCTCAAGGCCAT+CGG 0.583143 7.1:+39446042 None:intergenic
CTTTGTTACTCGATTTAGGG+AGG 0.585134 7.1:-39445429 MS.gene99623:CDS
TACCAGCCAAACGTGCCTCA+AGG 0.585310 7.1:+39446035 None:intergenic
ATGGACCCTCATTGAACTTG+CGG 0.586513 7.1:+39445871 None:intergenic
GCAATTTCAAAAGGGTGTTG+AGG 0.587105 7.1:-39446623 MS.gene99623:CDS
AGTTCATCGTTCATCACTCT+AGG 0.587295 7.1:+39446526 None:intergenic
CAAAGACTTTCATTACGACC+AGG 0.587494 7.1:-39445800 MS.gene99623:CDS
AACTACAGTAGAAAGAGCAG+TGG 0.587665 7.1:-39445192 MS.gene99623:CDS
ATTTCAAAAGGGTGTTGAGG+AGG 0.588136 7.1:-39446620 MS.gene99623:CDS
AAGGGAAGGAAGCATCCACA+CGG 0.589464 7.1:-39446454 MS.gene99623:CDS
AGTTATAGGCGAAAAGTACC+CGG 0.589749 7.1:-39446950 MS.gene99623:CDS
AAAGCTACGACTAGTAGGAA+AGG 0.590220 7.1:-39446241 MS.gene99623:CDS
GATAGCAAGTGGTTATTACA+AGG 0.594251 7.1:-39445125 MS.gene99623:CDS
TTTACCAATAATTCTTTGCG+CGG 0.594670 7.1:-39446814 MS.gene99623:CDS
ATGGGACACCATCCAGCTTG+AGG 0.596627 7.1:-39445630 MS.gene99623:CDS
TGATCCTTCTTATCAAACTG+AGG 0.602637 7.1:+39445504 None:intergenic
TAGGCCATTGGAAACCATAG+AGG 0.604324 7.1:+39445831 None:intergenic
ATCATAGTTGAACGCAACAA+AGG 0.606015 7.1:+39446373 None:intergenic
AGTAGTGAAACTGATGGTGT+TGG 0.608255 7.1:-39446898 MS.gene99623:CDS
AAACTTGCTGGATGAATCTG+TGG 0.612156 7.1:-39445552 MS.gene99623:CDS
TTGAATGTTATAGCTTGTGA+AGG 0.613935 7.1:-39445302 MS.gene99623:CDS
CCTGTGATCCGAAGTTTCGG+CGG 0.615573 7.1:+39445773 None:intergenic
TTATCGACGAAGATAGCAAG+TGG 0.616473 7.1:-39445136 MS.gene99623:CDS
AATCTGCCGCAAGTTCAATG+AGG 0.619310 7.1:-39445877 MS.gene99623:CDS
ATCTGCCGCAAGTTCAATGA+GGG 0.620148 7.1:-39445876 MS.gene99623:CDS
AGTGTAAGAAGTACCGTCGA+AGG 0.622470 7.1:-39446712 MS.gene99623:CDS
TATATTTGCCGATGGCCTTG+AGG 0.628661 7.1:-39446050 MS.gene99623:CDS
TAAGGTCGAGAAGGATGAGA+GGG 0.633129 7.1:-39446497 MS.gene99623:CDS
GTGTAAGAAGTACCGTCGAA+GGG 0.637907 7.1:-39446711 MS.gene99623:CDS
TGCCTCGCGAGGATTGGGAA+AGG 0.638817 7.1:-39445361 MS.gene99623:CDS
TTAAGGTCGAGAAGGATGAG+AGG 0.641254 7.1:-39446498 MS.gene99623:CDS
ACGACTAGTAGGAAAGGGCG+AGG 0.643128 7.1:-39446235 MS.gene99623:CDS
CGTCGATAACAAAATCCTTG+TGG 0.649122 7.1:+39445150 None:intergenic
AGTCTTAGTAGTGAAACTGA+TGG 0.650092 7.1:-39446904 MS.gene99623:CDS
ACATGAGGAACCTTCTCCTG+AGG 0.651054 7.1:-39447100 MS.gene99623:CDS
CAACAAATGAGATCCAGTTG+AGG 0.654653 7.1:-39447251 MS.gene99623:CDS
ATCCTTTCCCAATCCTCGCG+AGG 0.655939 7.1:+39445359 None:intergenic
ACTATCGGTTAAGGTCGAGA+AGG 0.658004 7.1:-39446506 MS.gene99623:CDS
TCTTTGTGCACAAGCTGTGG+CGG 0.664334 7.1:-39446161 MS.gene99623:CDS
GGATACCAAAGTCTATAACA+TGG 0.671335 7.1:+39445852 None:intergenic
AGAATCCAGAGTCCCTTCGA+CGG 0.675444 7.1:+39446699 None:intergenic
AAGGTTGTGAGAGAGTAGAG+AGG 0.678332 7.1:-39445283 MS.gene99623:CDS
CATCCAGCAAGTTTCTACCA+CGG 0.681365 7.1:+39445561 None:intergenic
GAAGAAGGTGTGCAATCAGG+TGG 0.695631 7.1:+39447144 None:intergenic
AGTAAGGTCTAGCTACCACA+AGG 0.698237 7.1:-39445165 MS.gene99623:CDS
GGAAGGAAGCATCCACACGG+GGG 0.698719 7.1:-39446451 MS.gene99623:CDS
GACCTCGATTTCGACACATG+AGG 0.702383 7.1:-39447115 MS.gene99623:CDS
AGACTTTCATTACGACCAGG+AGG 0.714994 7.1:-39445797 MS.gene99623:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCATTTTATGAAGTTAT+AGG - chr7.1:39445394-39445413 MS.gene99623:CDS 15.0%
!! TAATTGAGAAAGAGATATTT+GGG - chr7.1:39447024-39447043 MS.gene99623:CDS 20.0%
!! TTTGATCAAAGTATAGAATT+TGG - chr7.1:39445178-39445197 MS.gene99623:CDS 20.0%
!!! TGATTAGTCCTTTATAAATT+TGG + chr7.1:39446356-39446375 None:intergenic 20.0%
! AAACCGAATATATTCATTCA+CGG - chr7.1:39446876-39446895 MS.gene99623:CDS 25.0%
! ATAATGCCATAGCAAAAAAA+TGG - chr7.1:39446709-39446728 MS.gene99623:CDS 25.0%
! ATACCGTGAATGAATATATT+CGG + chr7.1:39446882-39446901 None:intergenic 25.0%
! CAGAATCAAAGATTTGAAAA+TGG - chr7.1:39445151-39445170 MS.gene99623:CDS 25.0%
! CTAATTGAGAAAGAGATATT+TGG - chr7.1:39447023-39447042 MS.gene99623:CDS 25.0%
! TAAAAAACAAAACGGGAAAA+AGG - chr7.1:39446146-39446165 MS.gene99623:CDS 25.0%
! TAATGCCATAGCAAAAAAAT+GGG - chr7.1:39446710-39446729 MS.gene99623:CDS 25.0%
! TTACATCAATAACATCCTTA+TGG - chr7.1:39445309-39445328 MS.gene99623:CDS 25.0%
! TTTCTTTGTTACTCGATTTA+GGG - chr7.1:39446926-39446945 MS.gene99623:CDS 25.0%
!! ACCAATTTTGCAATTTCAAA+AGG - chr7.1:39445726-39445745 MS.gene99623:CDS 25.0%
!! CCAATTTTGCAATTTCAAAA+GGG - chr7.1:39445727-39445746 MS.gene99623:CDS 25.0%
!!! CAAAATCTTAAAGGGTATTT+TGG - chr7.1:39445082-39445101 MS.gene99623:CDS 25.0%
!!! CAACATCAAAATTTTGAAAG+AGG + chr7.1:39445792-39445811 None:intergenic 25.0%
AAATCCTCAGTTTGATAAGA+AGG - chr7.1:39446850-39446869 MS.gene99623:CDS 30.0%
ACAGGAAGCCAAATTTATAA+AGG - chr7.1:39446345-39446364 MS.gene99623:CDS 30.0%
CTAAATCGAGTAACAAAGAA+AGG + chr7.1:39446927-39446946 None:intergenic 30.0%
CTTTCTTTGTTACTCGATTT+AGG - chr7.1:39446925-39446944 MS.gene99623:CDS 30.0%
GAAAGTCTTTGTATGAAAGT+AGG + chr7.1:39446549-39446568 None:intergenic 30.0%
TTCATTCACGGTATTGTTAA+TGG - chr7.1:39446888-39446907 MS.gene99623:CDS 30.0%
TTTACCAATAATTCTTTGCG+CGG - chr7.1:39445544-39445563 MS.gene99623:CDS 30.0%
TTTCCTTGAAAACCATTATG+AGG + chr7.1:39445592-39445611 None:intergenic 30.0%
! AAACTGAGGATTTTATTCCT+TGG + chr7.1:39446843-39446862 None:intergenic 30.0%
! AATCTTTGATTCTGAAGAAC+AGG + chr7.1:39445145-39445164 None:intergenic 30.0%
! TTGAATGTTATAGCTTGTGA+AGG - chr7.1:39447056-39447075 MS.gene99623:CDS 30.0%
! TTTCCTCATAATGGTTTTCA+AGG - chr7.1:39445586-39445605 MS.gene99623:CDS 30.0%
!! AACAAAGAAAGGAGCATTAA+AGG + chr7.1:39446916-39446935 None:intergenic 30.0%
!!! CCCTTTTGAAATTGCAAAAT+TGG + chr7.1:39445730-39445749 None:intergenic 30.0%
AAATTCGTATTCTTCGAGCT+GGG - chr7.1:39447120-39447139 MS.gene99623:CDS 35.0%
AAGTTTCTCCCTAATGGAAA+TGG - chr7.1:39445766-39445785 MS.gene99623:CDS 35.0%
AGACAAAACTAGTCATCTTC+CGG + chr7.1:39446443-39446462 None:intergenic 35.0%
AGTCTTAGTAGTGAAACTGA+TGG - chr7.1:39445454-39445473 MS.gene99623:CDS 35.0%
AGTGATGAACGATGAACTAT+CGG - chr7.1:39445837-39445856 MS.gene99623:CDS 35.0%
ATAGACTTTGGTATCCTCTA+TGG - chr7.1:39446513-39446532 MS.gene99623:CDS 35.0%
ATCATAGTTGAACGCAACAA+AGG + chr7.1:39445988-39446007 None:intergenic 35.0%
CATCCTTATGGAAGAAGATA+TGG - chr7.1:39445321-39445340 MS.gene99623:CDS 35.0%
CTTCCATATCTTCTTCCATA+AGG + chr7.1:39445327-39445346 None:intergenic 35.0%
GAAGCTCAATTTCCTCATAA+TGG - chr7.1:39445577-39445596 MS.gene99623:CDS 35.0%
GATAGCAAGTGGTTATTACA+AGG - chr7.1:39447233-39447252 MS.gene99623:CDS 35.0%
GCAGAGAGAATTATAGAAAC+CGG - chr7.1:39446639-39446658 MS.gene99623:CDS 35.0%
GCTAATAAGTTTCTCCCTAA+TGG - chr7.1:39445760-39445779 MS.gene99623:CDS 35.0%
GCTATGGCATTATACTCAAA+TGG + chr7.1:39446702-39446721 None:intergenic 35.0%
GGATACCAAAGTCTATAACA+TGG + chr7.1:39446509-39446528 None:intergenic 35.0%
GGTAAAAACAGGTAACAACT+AGG + chr7.1:39446779-39446798 None:intergenic 35.0%
GTAGCTTTCGATGTATTACT+TGG + chr7.1:39446105-39446124 None:intergenic 35.0%
GTTTCACTACTAAGACTTTG+AGG + chr7.1:39445451-39445470 None:intergenic 35.0%
GTTTCTATAATTCTCTCTGC+AGG + chr7.1:39446639-39446658 None:intergenic 35.0%
TGAGAAAGAGATATTTGGGA+AGG - chr7.1:39447028-39447047 MS.gene99623:CDS 35.0%
TGATCCTTCTTATCAAACTG+AGG + chr7.1:39446857-39446876 None:intergenic 35.0%
TTTGTATGAAAGTAGGCCAT+TGG + chr7.1:39446542-39446561 None:intergenic 35.0%
TTTGTTGCGTTCAACTATGA+TGG - chr7.1:39445987-39446006 MS.gene99623:CDS 35.0%
! AGATGCTAAGACGCATTTTA+CGG - chr7.1:39446035-39446054 MS.gene99623:CDS 35.0%
! TATGGTACTTGTGTTGATGA+TGG - chr7.1:39445505-39445524 MS.gene99623:CDS 35.0%
! TCTTTTCCTTTTGGATCCAA+GGG - chr7.1:39445886-39445905 MS.gene99623:CDS 35.0%
! TTCTTTTCCTTTTGGATCCA+AGG - chr7.1:39445885-39445904 MS.gene99623:CDS 35.0%
!!! AGACTTTGAGGTTTTCCTAA+CGG + chr7.1:39445439-39445458 None:intergenic 35.0%
AAACTAGTCATCTTCCGGAA+AGG + chr7.1:39446438-39446457 None:intergenic 40.0%
AAAGAGCAGTGGAGAAAGTA+AGG - chr7.1:39447177-39447196 MS.gene99623:CDS 40.0%
AAAGCTACGACTAGTAGGAA+AGG - chr7.1:39446117-39446136 MS.gene99623:CDS 40.0%
AACTACAGTAGAAAGAGCAG+TGG - chr7.1:39447166-39447185 MS.gene99623:CDS 40.0%
AACTAGTCATCTTCCGGAAA+GGG + chr7.1:39446437-39446456 None:intergenic 40.0%
AAGCTACGACTAGTAGGAAA+GGG - chr7.1:39446118-39446137 MS.gene99623:CDS 40.0%
ACGTTCCTGCTTCATAGTTT+AGG - chr7.1:39446012-39446031 MS.gene99623:CDS 40.0%
AGGGTCCATGTTATAGACTT+TGG - chr7.1:39446501-39446520 MS.gene99623:CDS 40.0%
AGTTCATCGTTCATCACTCT+AGG + chr7.1:39445835-39445854 None:intergenic 40.0%
ATTCCTGTGATCCGAAGTTT+CGG + chr7.1:39446591-39446610 None:intergenic 40.0%
CAAAGACTTTCATTACGACC+AGG - chr7.1:39446558-39446577 MS.gene99623:CDS 40.0%
CAAATTCGTATTCTTCGAGC+TGG - chr7.1:39447119-39447138 MS.gene99623:CDS 40.0%
CAACAAATGAGATCCAGTTG+AGG - chr7.1:39445107-39445126 MS.gene99623:CDS 40.0%
CATCTCCTAAACTATGAAGC+AGG + chr7.1:39446020-39446039 None:intergenic 40.0%
CGTCGATAACAAAATCCTTG+TGG + chr7.1:39447211-39447230 None:intergenic 40.0%
CTTTGTTACTCGATTTAGGG+AGG - chr7.1:39446929-39446948 MS.gene99623:CDS 40.0%
GAAAGAGGCCATTTCCATTA+GGG + chr7.1:39445777-39445796 None:intergenic 40.0%
GGCGAGGTAAAAAACAAAAC+GGG - chr7.1:39446139-39446158 MS.gene99623:CDS 40.0%
GGGCGAGGTAAAAAACAAAA+CGG - chr7.1:39446138-39446157 MS.gene99623:CDS 40.0%
GGTTATTACAAGGCTGGAAA+GGG - chr7.1:39447243-39447262 MS.gene99623:CDS 40.0%
GTATCCTCTATGGTTTCCAA+TGG - chr7.1:39446523-39446542 MS.gene99623:CDS 40.0%
GTTTCCGCGCAAAGAATTAT+TGG + chr7.1:39445551-39445570 None:intergenic 40.0%
GTTTCTACCACGGTAAAAAC+AGG + chr7.1:39446790-39446809 None:intergenic 40.0%
TCAGAAAATTCACACTCCTC+AGG + chr7.1:39445277-39445296 None:intergenic 40.0%
TCGTTTACGCACTTTCTTGT+TGG - chr7.1:39447270-39447289 MS.gene99623:CDS 40.0%
TGAAAGAGGCCATTTCCATT+AGG + chr7.1:39445778-39445797 None:intergenic 40.0%
TGGTTATTACAAGGCTGGAA+AGG - chr7.1:39447242-39447261 MS.gene99623:CDS 40.0%
TTATCGACGAAGATAGCAAG+TGG - chr7.1:39447222-39447241 MS.gene99623:CDS 40.0%
TTGGCTCATATATTTGCCGA+TGG - chr7.1:39446300-39446319 MS.gene99623:CDS 40.0%
! AGTAGTGAAACTGATGGTGT+TGG - chr7.1:39445460-39445479 MS.gene99623:CDS 40.0%
! GAACGATGAACTATCGGTTA+AGG - chr7.1:39445843-39445862 MS.gene99623:CDS 40.0%
! GAGAGGGATTCTTTTCCTTT+TGG - chr7.1:39445877-39445896 MS.gene99623:CDS 40.0%
! GCAAAGATTGATTCCTCAAC+TGG + chr7.1:39445123-39445142 None:intergenic 40.0%
! GCTGATTTCCATCTCCAAAA+GGG + chr7.1:39446278-39446297 None:intergenic 40.0%
!! AAACTTGCTGGATGAATCTG+TGG - chr7.1:39446806-39446825 MS.gene99623:CDS 40.0%
!! AGTTATAGGCGAAAAGTACC+CGG - chr7.1:39445408-39445427 MS.gene99623:CDS 40.0%
!! ATTTCAAAAGGGTGTTGAGG+AGG - chr7.1:39445738-39445757 MS.gene99623:CDS 40.0%
!! CTTTTGGAGATGGAAATCAG+CGG - chr7.1:39446277-39446296 MS.gene99623:CDS 40.0%
!! GCAATTTCAAAAGGGTGTTG+AGG - chr7.1:39445735-39445754 MS.gene99623:CDS 40.0%
!!! GGTGTCCCATTTTTTTGCTA+TGG + chr7.1:39446718-39446737 None:intergenic 40.0%
!!! GTTGTTACCTGTTTTTACCG+TGG - chr7.1:39446780-39446799 MS.gene99623:CDS 40.0%
AAGGTTGTGAGAGAGTAGAG+AGG - chr7.1:39447075-39447094 MS.gene99623:CDS 45.0%
AATCTGCCGCAAGTTCAATG+AGG - chr7.1:39446481-39446500 MS.gene99623:CDS 45.0%
AATTCACACTCCTCAGGAGA+AGG + chr7.1:39445271-39445290 None:intergenic 45.0%
ACTTTCCACAACCTGGTTTC+AGG - chr7.1:39446613-39446632 MS.gene99623:CDS 45.0%
AGACTTTCATTACGACCAGG+AGG - chr7.1:39446561-39446580 MS.gene99623:CDS 45.0%
AGTAAGGTCTAGCTACCACA+AGG - chr7.1:39447193-39447212 MS.gene99623:CDS 45.0%
ATCGAGGTCGTTGTTGAAGA+AGG + chr7.1:39445232-39445251 None:intergenic 45.0%
ATCTGCCGCAAGTTCAATGA+GGG - chr7.1:39446482-39446501 MS.gene99623:CDS 45.0%
ATGGACCCTCATTGAACTTG+CGG + chr7.1:39446490-39446509 None:intergenic 45.0%
ATTCTTTGCGCGGAAACTTG+AGG - chr7.1:39445554-39445573 MS.gene99623:CDS 45.0%
CAATCTTGAGTTCCTCAAGC+TGG + chr7.1:39446743-39446762 None:intergenic 45.0%
CATCCAGCAAGTTTCTACCA+CGG + chr7.1:39446800-39446819 None:intergenic 45.0%
CATCGAAAGCTACGACTAGT+AGG - chr7.1:39446112-39446131 MS.gene99623:CDS 45.0%
GAAACCTGTAGATCACTGTC+TGG + chr7.1:39445685-39445704 None:intergenic 45.0%
GCAAGTGGTTATTACAAGGC+TGG - chr7.1:39447237-39447256 MS.gene99623:CDS 45.0%
GGAATAGACTTTCCACAACC+TGG - chr7.1:39446606-39446625 MS.gene99623:CDS 45.0%
TAAGGTCGAGAAGGATGAGA+GGG - chr7.1:39445861-39445880 MS.gene99623:CDS 45.0%
TAGAGAGGCCAGAGACATAT+CGG - chr7.1:39447090-39447109 MS.gene99623:CDS 45.0%
TAGGCCATTGGAAACCATAG+AGG + chr7.1:39446530-39446549 None:intergenic 45.0%
TGTTCTTTGTGCACAAGCTG+TGG - chr7.1:39446194-39446213 MS.gene99623:CDS 45.0%
TTAAGGTCGAGAAGGATGAG+AGG - chr7.1:39445860-39445879 MS.gene99623:CDS 45.0%
TTACCGTGGTAGAAACTTGC+TGG - chr7.1:39446794-39446813 MS.gene99623:CDS 45.0%
TTCCTCATGTGTCGAAATCG+AGG + chr7.1:39445248-39445267 None:intergenic 45.0%
TTCCTTCCCTTGGATCCAAA+AGG + chr7.1:39445895-39445914 None:intergenic 45.0%
TTCTCCAGACAGTGATCTAC+AGG - chr7.1:39445678-39445697 MS.gene99623:CDS 45.0%
TTCTTTGCGCGGAAACTTGA+GGG - chr7.1:39445555-39445574 MS.gene99623:CDS 45.0%
! ACTATCGGTTAAGGTCGAGA+AGG - chr7.1:39445852-39445871 MS.gene99623:CDS 45.0%
! AGACAGCACTCAAACCCTTT+TGG - chr7.1:39446261-39446280 MS.gene99623:CDS 45.0%
! GCAACTCATGTGCGCTTTTA+TGG + chr7.1:39446230-39446249 None:intergenic 45.0%
! GTTGAAGAAGGTGTGCAATC+AGG + chr7.1:39445220-39445239 None:intergenic 45.0%
! TATATTTGCCGATGGCCTTG+AGG - chr7.1:39446308-39446327 MS.gene99623:CDS 45.0%
! TTCCTTTTGGATCCAAGGGA+AGG - chr7.1:39445890-39445909 MS.gene99623:CDS 45.0%
!! AGTGTAAGAAGTACCGTCGA+AGG - chr7.1:39445646-39445665 MS.gene99623:CDS 45.0%
!! CACTCAAACCCTTTTGGAGA+TGG - chr7.1:39446267-39446286 MS.gene99623:CDS 45.0%
!! CGCTGATTTCCATCTCCAAA+AGG + chr7.1:39446279-39446298 None:intergenic 45.0%
!! GTGTAAGAAGTACCGTCGAA+GGG - chr7.1:39445647-39445666 MS.gene99623:CDS 45.0%
!!! AATTACTTTTTTAATAATTA+TGG - chr7.1:39445487-39445506 MS.gene99623:CDS 5.0%
ACATGAGGAACCTTCTCCTG+AGG - chr7.1:39445258-39445277 MS.gene99623:CDS 50.0%
AGAATCCAGAGTCCCTTCGA+CGG + chr7.1:39445662-39445681 None:intergenic 50.0%
CTTGAGTTCCTCAAGCTGGA+TGG + chr7.1:39446739-39446758 None:intergenic 50.0%
GACCTCGATTTCGACACATG+AGG - chr7.1:39445243-39445262 MS.gene99623:CDS 50.0%
TCTTTGTGCACAAGCTGTGG+CGG - chr7.1:39446197-39446216 MS.gene99623:CDS 50.0%
TGGAGATGGAAATCAGCGGT+TGG - chr7.1:39446281-39446300 MS.gene99623:CDS 50.0%
! GAAGAAGGTGTGCAATCAGG+TGG + chr7.1:39445217-39445236 None:intergenic 50.0%
! GGTTTTCCTAACGGCGAAAC+CGG + chr7.1:39445430-39445449 None:intergenic 50.0%
! GTTTTCCTAACGGCGAAACC+GGG + chr7.1:39445429-39445448 None:intergenic 50.0%
! TCGAGCTGGGTTTTCACAAC+AGG - chr7.1:39447133-39447152 MS.gene99623:CDS 50.0%
!! AAGGGAAGGAAGCATCCACA+CGG - chr7.1:39445904-39445923 MS.gene99623:CDS 50.0%
!! TATAGAAACCGGTTCGCGCT+TGG - chr7.1:39446650-39446669 MS.gene99623:CDS 50.0%
AAGTACCCGGTTTCGCCGTT+AGG - chr7.1:39445421-39445440 MS.gene99623:CDS 55.0%
ACCTTGCAGCTTGCCCTTTC+CGG - chr7.1:39446421-39446440 MS.gene99623:CDS 55.0%
ACGACTAGTAGGAAAGGGCG+AGG - chr7.1:39446123-39446142 MS.gene99623:CDS 55.0%
ATCCTTTCCCAATCCTCGCG+AGG + chr7.1:39447002-39447021 None:intergenic 55.0%
ATGGGACACCATCCAGCTTG+AGG - chr7.1:39446728-39446747 MS.gene99623:CDS 55.0%
ATGTCTACTTCTCCCCCGTG+TGG + chr7.1:39445922-39445941 None:intergenic 55.0%
CAAACGTGCCTCAAGGCCAT+CGG + chr7.1:39446319-39446338 None:intergenic 55.0%
CCTGTGATCCGAAGTTTCGG+CGG + chr7.1:39446588-39446607 None:intergenic 55.0%
CTGTGGTAGTCGACAGTCCA+AGG - chr7.1:39446823-39446842 MS.gene99623:CDS 55.0%
GTGTGGATGCTTCCTTCCCT+TGG + chr7.1:39445905-39445924 None:intergenic 55.0%
TACCAGCCAAACGTGCCTCA+AGG + chr7.1:39446326-39446345 None:intergenic 55.0%
TATCGTGCCTCGCGAGGATT+GGG - chr7.1:39446992-39447011 MS.gene99623:CDS 55.0%
TGCCACTGCCGATATGTCTC+TGG + chr7.1:39447101-39447120 None:intergenic 55.0%
! AAGTACCGTCGAAGGGACTC+TGG - chr7.1:39445654-39445673 MS.gene99623:CDS 55.0%
! GCATTTTACGGCTCGTCGCA+AGG - chr7.1:39446047-39446066 MS.gene99623:CDS 55.0%
!! AGGGAAGGAAGCATCCACAC+GGG - chr7.1:39445905-39445924 MS.gene99623:CDS 55.0%
!! TGAAAGTATCGTGCCTCGCG+AGG - chr7.1:39446986-39447005 MS.gene99623:CDS 55.0%
ATACGCTGCCAAGCGCGAAC+CGG + chr7.1:39446661-39446680 None:intergenic 60.0%
CAGGAGGACCGCCGAAACTT+CGG - chr7.1:39446577-39446596 MS.gene99623:CDS 60.0%
CCGCCGAAACTTCGGATCAC+AGG - chr7.1:39446585-39446604 MS.gene99623:CDS 60.0%
CTCTCTGCAGGCCTGAAACC+AGG + chr7.1:39446627-39446646 None:intergenic 60.0%
GAGGCACGTTTGGCTGGTAC+AGG - chr7.1:39446327-39446346 MS.gene99623:CDS 60.0%
GCAGGCCTGAAACCAGGTTG+TGG + chr7.1:39446621-39446640 None:intergenic 60.0%
GGCCAGAGACATATCGGCAG+TGG - chr7.1:39447096-39447115 MS.gene99623:CDS 60.0%
GTATCGTGCCTCGCGAGGAT+TGG - chr7.1:39446991-39447010 MS.gene99623:CDS 60.0%
TCCGGAAAGGGCAAGCTGCA+AGG + chr7.1:39446425-39446444 None:intergenic 60.0%
TGCCTCGCGAGGATTGGGAA+AGG - chr7.1:39446997-39447016 MS.gene99623:CDS 60.0%
! CGATGGCCTTGAGGCACGTT+TGG - chr7.1:39446317-39446336 MS.gene99623:CDS 60.0%
!! GGAAGGAAGCATCCACACGG+GGG - chr7.1:39445907-39445926 MS.gene99623:CDS 60.0%
!! GGGAAGGAAGCATCCACACG+GGG - chr7.1:39445906-39445925 MS.gene99623:CDS 60.0%
CGAAGTTTCGGCGGTCCTCC+TGG + chr7.1:39446579-39446598 None:intergenic 65.0%
GGCCTTGAGGCACGTTTGGC+TGG - chr7.1:39446321-39446340 MS.gene99623:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 39445076 39447304 39445076 ID=MS.gene99623
chr7.1 mRNA 39445076 39447304 39445076 ID=MS.gene99623.t1;Parent=MS.gene99623
chr7.1 exon 39445076 39447304 39445076 ID=MS.gene99623.t1.exon1;Parent=MS.gene99623.t1
chr7.1 CDS 39445076 39447304 39445076 ID=cds.MS.gene99623.t1;Parent=MS.gene99623.t1
Gene Sequence

>MS.gene99623

ATGGATCAAAATCTTAAAGGGTATTTTGGTTCAACAAATGAGATCCAGTTGAGGAATCAATCTTTGCCTGTTCTTCAGAATCAAAGATTTGAAAATGGTTTCTTTGATCAAAGTATAGAATTTGGTTCTAATATGATACCACCTGATTGCACACCTTCTTCAACAACGACCTCGATTTCGACACATGAGGAACCTTCTCCTGAGGAGTGTGAATTTTCTGATGCTGTTTTGAGTTACATCAATAACATCCTTATGGAAGAAGATATGGAAGATAAAACATGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCATTTTATGAAGTTATAGGCGAAAAGTACCCGGTTTCGCCGTTAGGAAAACCTCAAAGTCTTAGTAGTGAAACTGATGGTGTTGGAGATAATTACTTTTTTAATAATTATGGTACTTGTGTTGATGATGGTAATCTTAGTAGCATTTTTACCAATAATTCTTTGCGCGGAAACTTGAGGGAAGCTCAATTTCCTCATAATGGTTTTCAAGGAAATAGCATTGCACAATCATCTTATAGCTCGACAAACAGTGTAAGAAGTACCGTCGAAGGGACTCTGGATTCTCCAGACAGTGATCTACAGGTTTCTGATCAGAATAGTGAGAGTCAACCAATTTTGCAATTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAATGGAAATGGCCTCTTTCAAAATTTTGATGTTGCTAAGTATTCGATGATAGAGCCTAGAGTGATGAACGATGAACTATCGGTTAAGGTCGAGAAGGATGAGAGGGATTCTTTTCCTTTTGGATCCAAGGGAAGGAAGCATCCACACGGGGGAGAAGTAGACATTGAAGAAAATAGAAGCAGCAAGCAAGCAGCGATTTACTCAGAACCTTTGTTGCGTTCAACTATGATGGATACGTTCCTGCTTCATAGTTTAGGAGATGCTAAGACGCATTTTACGGCTCGTCGCAAGGCGTTACAAGTAAAAACAAAGATTATAACATTGCCAAGTAATACATCGAAAGCTACGACTAGTAGGAAAGGGCGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACACTGCTTGTTCTTTGTGCACAAGCTGTGGCGGCAGACGACCATAAAAGCGCACATGAGTTGCTAAAGCAGATCAGACAGCACTCAAACCCTTTTGGAGATGGAAATCAGCGGTTGGCTCATATATTTGCCGATGGCCTTGAGGCACGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACATCTGCTGCTGACTTTCTGAAAGCTTATCATCTATACCTTGCAGCTTGCCCTTTCCGGAAGATGACTAGTTTTGTCTCGAATGTCACTATATTTAAATCTGCCGCAAGTTCAATGAGGGTCCATGTTATAGACTTTGGTATCCTCTATGGTTTCCAATGGCCTACTTTCATACAAAGACTTTCATTACGACCAGGAGGACCGCCGAAACTTCGGATCACAGGAATAGACTTTCCACAACCTGGTTTCAGGCCTGCAGAGAGAATTATAGAAACCGGTTCGCGCTTGGCAGCGTATGCTGAATCTTTTAATGTGCCATTTGAGTATAATGCCATAGCAAAAAAATGGGACACCATCCAGCTTGAGGAACTCAAGATTGAAAAAGATGAATTCCTAGTTGTTACCTGTTTTTACCGTGGTAGAAACTTGCTGGATGAATCTGTGGTAGTCGACAGTCCAAGGAATAAAATCCTCAGTTTGATAAGAAGGATCAAACCGAATATATTCATTCACGGTATTGTTAATGGAGCCTTTAATGCTCCTTTCTTTGTTACTCGATTTAGGGAGGCGTTGTTTCACTTCTCTTCACTTTTCGATATGCTTGAAAGTATCGTGCCTCGCGAGGATTGGGAAAGGATGCTAATTGAGAAAGAGATATTTGGGAAGGAAGCATTGAATGTTATAGCTTGTGAAGGTTGTGAGAGAGTAGAGAGGCCAGAGACATATCGGCAGTGGCAAATTCGTATTCTTCGAGCTGGGTTTTCACAACAGGCTTTCGCGAAAACTACAGTAGAAAGAGCAGTGGAGAAAGTAAGGTCTAGCTACCACAAGGATTTTGTTATCGACGAAGATAGCAAGTGGTTATTACAAGGCTGGAAAGGGCGAATCGTTTACGCACTTTCTTGTTGGAAACTTGCATGA
Protein sequence

>MS.gene99623.t1

MDQNLKGYFGSTNEIQLRNQSLPVLQNQRFENGFFDQSIEFGSNMIPPDCTPSSTTTSISTHEEPSPEECEFSDAVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLGKPQSLSSETDGVGDNYFFNNYGTCVDDGNLSSIFTNNSLRGNLREAQFPHNGFQGNSIAQSSYSSTNSVRSTVEGTLDSPDSDLQVSDQNSESQPILQFQKGVEEANKFLPNGNGLFQNFDVAKYSMIEPRVMNDELSVKVEKDERDSFPFGSKGRKHPHGGEVDIEENRSSKQAAIYSEPLLRSTMMDTFLLHSLGDAKTHFTARRKALQVKTKIITLPSNTSKATTSRKGRGKKQNGKKEVIDLRTLLVLCAQAVAADDHKSAHELLKQIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYHLYLAACPFRKMTSFVSNVTIFKSAASSMRVHVIDFGILYGFQWPTFIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAESFNVPFEYNAIAKKWDTIQLEELKIEKDEFLVVTCFYRGRNLLDESVVVDSPRNKILSLIRRIKPNIFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLESIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQIRILRAGFSQQAFAKTTVERAVEKVRSSYHKDFVIDEDSKWLLQGWKGRIVYALSCWKLA