AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99646

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99646.t1 MTR_1g105020 96.615 325 9 1 1 325 1 323 0.0 643
MS.gene99646.t1 MTR_5g005850 56.442 326 137 4 2 325 7 329 1.36e-136 390
MS.gene99646.t1 MTR_3g450680 52.960 321 148 2 5 324 13 331 1.21e-119 348
MS.gene99646.t1 MTR_5g005920 50.915 328 152 4 2 324 7 330 3.91e-116 339
MS.gene99646.t1 MTR_7g051020 55.247 324 136 5 4 324 8 325 1.64e-115 337
MS.gene99646.t1 MTR_1g104930 55.108 323 135 5 4 324 8 322 8.06e-110 322
MS.gene99646.t1 MTR_5g005900 49.387 326 160 3 2 324 3 326 1.39e-109 322
MS.gene99646.t1 MTR_8g040860 49.686 318 156 2 7 324 15 328 6.92e-106 313
MS.gene99646.t1 MTR_1g104933 53.918 319 137 5 6 324 8 316 1.59e-104 309
MS.gene99646.t1 MTR_4g086510 44.207 328 168 8 1 324 1 317 3.84e-92 277
MS.gene99646.t1 MTR_4g086480 43.636 330 168 9 1 324 1 318 2.60e-88 268
MS.gene99646.t1 MTR_7g056207 42.945 326 171 8 3 324 35 349 6.67e-84 257
MS.gene99646.t1 MTR_3g101420 40.764 314 177 4 11 324 10 314 1.05e-83 256
MS.gene99646.t1 MTR_4g086540 44.272 323 150 7 3 325 13 305 1.41e-82 253
MS.gene99646.t1 MTR_4g086470 43.574 319 168 7 7 324 10 317 2.05e-82 252
MS.gene99646.t1 MTR_7g406880 34.731 334 182 12 15 324 28 349 1.78e-50 171
MS.gene99646.t1 MTR_1g111280 33.333 318 193 9 11 320 29 335 4.19e-50 170
MS.gene99646.t1 MTR_4g050140 33.333 330 194 10 5 324 2 315 1.86e-45 157
MS.gene99646.t1 MTR_1g012430 33.962 318 190 11 11 324 6 307 2.48e-42 149
MS.gene99646.t1 MTR_7g107040 31.230 317 199 11 15 325 14 317 2.96e-39 141
MS.gene99646.t1 MTR_3g012440 32.407 324 190 13 1 305 1 314 3.82e-37 136
MS.gene99646.t1 MTR_1g102160 37.959 245 131 8 4 239 7 239 1.86e-33 125
MS.gene99646.t1 MTR_8g035540 31.229 301 174 10 16 303 9 289 1.25e-32 124
MS.gene99646.t1 MTR_1g102170 34.586 266 146 9 21 274 43 292 1.35e-32 124
MS.gene99646.t1 MTR_6g464120 39.247 186 100 4 21 204 29 203 7.70e-31 122
MS.gene99646.t1 MTR_0007s0520 33.755 237 136 8 21 249 26 249 8.54e-31 119
MS.gene99646.t1 MTR_8g035520 30.573 314 202 9 16 322 21 325 1.03e-29 115
MS.gene99646.t1 MTR_6g065270 28.146 302 183 8 40 324 51 335 6.65e-29 114
MS.gene99646.t1 MTR_6g065120 28.483 323 192 11 21 324 33 335 1.47e-28 113
MS.gene99646.t1 MTR_1g089310 29.630 297 169 8 21 297 38 314 1.91e-28 112
MS.gene99646.t1 MTR_1g089310 29.630 297 169 8 21 297 54 330 1.97e-28 113
MS.gene99646.t1 MTR_6g464510 31.834 289 175 9 44 324 52 326 2.01e-28 112
MS.gene99646.t1 MTR_6g065340 28.378 296 170 9 40 324 64 328 1.14e-27 110
MS.gene99646.t1 MTR_1g082210 29.766 299 166 9 21 297 38 314 2.37e-27 110
MS.gene99646.t1 MTR_6g065370 26.791 321 199 11 21 324 32 333 1.57e-26 107
MS.gene99646.t1 MTR_6g464320 30.982 326 191 14 15 322 17 326 2.63e-26 106
MS.gene99646.t1 MTR_6g065430 27.302 315 202 10 21 325 31 328 8.77e-26 105
MS.gene99646.t1 MTR_6g065400 27.019 322 197 12 21 324 32 333 1.33e-25 105
MS.gene99646.t1 MTR_7g093950 28.182 330 190 12 21 324 38 346 3.42e-25 103
MS.gene99646.t1 MTR_6g464280 35.912 181 101 4 38 213 40 210 7.98e-25 102
MS.gene99646.t1 MTR_8g035500 31.522 276 170 10 21 286 17 283 9.44e-25 102
MS.gene99646.t1 MTR_6g065110 27.329 322 196 11 21 324 33 334 1.47e-24 102
MS.gene99646.t1 MTR_6g022710 29.804 255 144 7 62 284 146 397 3.74e-23 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99646.t1 AT1G47480 41.667 324 174 5 1 324 1 309 1.25e-80 248
MS.gene99646.t1 AT3G48700 38.110 328 187 8 7 324 4 325 4.25e-73 229
MS.gene99646.t1 AT2G03550 38.782 312 178 7 14 324 11 310 1.14e-72 227
MS.gene99646.t1 AT3G48690 39.877 326 179 9 7 324 4 320 6.56e-72 226
MS.gene99646.t1 AT1G19190 39.009 323 179 9 7 324 4 313 1.14e-70 222
MS.gene99646.t1 AT1G49650 38.679 318 180 8 13 325 66 373 2.17e-68 218
MS.gene99646.t1 AT1G49640 37.421 318 178 8 14 325 12 314 3.41e-68 216
MS.gene99646.t1 AT1G49660 37.920 327 183 9 7 325 4 318 3.70e-63 203
MS.gene99646.t1 AT1G68620 30.581 327 191 12 11 324 26 329 5.60e-39 140
MS.gene99646.t1 AT5G16080 30.675 326 199 11 11 324 31 341 3.22e-36 134
MS.gene99646.t1 AT3G05120 29.755 326 185 11 21 324 38 341 6.16e-35 130
MS.gene99646.t1 AT5G06570 32.492 317 199 8 15 324 17 325 6.95e-33 124
MS.gene99646.t1 AT5G06570 32.492 317 199 8 15 324 17 325 6.95e-33 124
MS.gene99646.t1 AT5G06570 32.492 317 199 8 15 324 32 340 1.04e-32 124
MS.gene99646.t1 AT5G06570 32.492 317 199 8 15 324 32 340 1.04e-32 124
MS.gene99646.t1 AT2G45600 33.333 285 162 8 21 297 21 285 2.26e-32 123
MS.gene99646.t1 AT3G63010 31.010 287 159 7 21 286 38 306 2.43e-32 123
MS.gene99646.t1 AT5G62180 33.226 310 176 12 21 314 21 315 1.17e-31 121
MS.gene99646.t1 AT5G27320 28.793 323 190 10 21 324 38 339 1.42e-31 121
MS.gene99646.t1 AT5G23530 30.547 311 190 11 21 324 35 326 5.42e-30 117
MS.gene99646.t1 AT2G45610 29.641 334 207 10 8 324 1 323 9.30e-30 116
MS.gene99646.t1 AT5G14310 28.627 255 149 5 62 284 140 393 1.99e-22 97.4

Find 62 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGAGACACCTGTTTC+TGG 0.105047 1.4:-80808315 None:intergenic
TCAATAGAATTCTGAGTTTC+AGG 0.180854 1.4:-80809119 None:intergenic
AAGTTCTCTGTCTATTTCTT+TGG 0.266373 1.4:-80808211 None:intergenic
TGAGTTTCGTTGGTGAGTTT+TGG 0.267278 1.4:-80808387 None:intergenic
GGCTATTGATGCTCCTAGTT+TGG 0.297036 1.4:+80808935 MS.gene99646:CDS
ACAAAATTCCAAACTTTCAT+TGG 0.310236 1.4:-80808864 None:intergenic
AAAGTTCACCAATGAAAGTT+TGG 0.314743 1.4:+80808856 MS.gene99646:CDS
GGAACAGTTGAACGTTTCTT+AGG 0.318313 1.4:+80808261 MS.gene99646:CDS
TAACCCTTTGATTAATCCTT+TGG 0.318593 1.4:+80808914 MS.gene99646:CDS
TACATTGGTGGTGATACTTC+AGG 0.326467 1.4:+80808684 MS.gene99646:CDS
GCTCCTAGTTTGGATATTAT+TGG 0.329779 1.4:+80808945 MS.gene99646:CDS
TGAATACGTGCAGAGATTAA+TGG 0.334035 1.4:-80808360 None:intergenic
CTTCCTGCTGCTTATGATGA+TGG 0.347453 1.4:+80808561 MS.gene99646:CDS
GGTGATGTCGTTGTTGTTGA+TGG 0.359693 1.4:-80808616 None:intergenic
ATTTAAGAGACAGAGGGATT+TGG 0.369398 1.4:+80809006 MS.gene99646:CDS
TCAATTCCACCAGGTGCATC+AGG 0.374795 1.4:-80808891 None:intergenic
CCGGTCTTAGTTTACTATCA+TGG 0.375420 1.4:+80808417 MS.gene99646:CDS
AACTCAGAATTCTATTGATA+TGG 0.381841 1.4:+80809124 MS.gene99646:CDS
GAATACGTGCAGAGATTAAT+GGG 0.385636 1.4:-80808359 None:intergenic
GTTTCTGGATCAAGAGGAAT+TGG 0.389842 1.4:-80808300 None:intergenic
CAACGAAACTCAAAAGCTTC+CGG 0.432017 1.4:+80808398 MS.gene99646:CDS
TCAACTGATTCTGACAAAAC+CGG 0.447965 1.4:-80808822 None:intergenic
GCAGCAGGAAGAGGGTGTTC+TGG 0.450690 1.4:-80808549 None:intergenic
ATTCCTCTTGATCCAGAAAC+AGG 0.456062 1.4:+80808303 MS.gene99646:CDS
GCACTTCTTCGTGTTGGAAA+TGG 0.463279 1.4:+80808726 MS.gene99646:CDS
CTGCTGCTTATGATGATGGT+TGG 0.469195 1.4:+80808565 MS.gene99646:CDS
CTTCTCCGTGTCTACAAAGA+TGG 0.477681 1.4:+80808240 MS.gene99646:CDS
CTTGTGAAGCAATGATGTTA+AGG 0.483989 1.4:-80808488 None:intergenic
TACGATGCTGTTAAGAAAAG+TGG 0.484998 1.4:+80809032 MS.gene99646:CDS
TAGCCAAAGGATTAATCAAA+GGG 0.494694 1.4:-80808917 None:intergenic
GTGGAACTTGTTCATGTTGA+AGG 0.503646 1.4:+80809068 MS.gene99646:CDS
CATAATGCACTTCTTCGTGT+TGG 0.518921 1.4:+80808720 MS.gene99646:CDS
TCATCATAAGCAGCAGGAAG+AGG 0.537637 1.4:-80808558 None:intergenic
ATAGCCAAAGGATTAATCAA+AGG 0.543740 1.4:-80808918 None:intergenic
AATGATGATTTAAGAGACAG+AGG 0.549281 1.4:+80808999 MS.gene99646:CDS
CTGTTCCATCTTTGTAGACA+CGG 0.552711 1.4:-80808245 None:intergenic
CAACCATCATCATAAGCAGC+AGG 0.553072 1.4:-80808564 None:intergenic
CCATGATAGTAAACTAAGAC+CGG 0.555089 1.4:-80808417 None:intergenic
CAACCAATAATATCCAAACT+AGG 0.558309 1.4:-80808948 None:intergenic
GGTTTCGAACTCCAAAATAG+AGG 0.560080 1.4:-80808801 None:intergenic
TCTGGATCAAGAGGAATTGG+TGG 0.577329 1.4:-80808297 None:intergenic
TTTGTGTACCCTGATGCACC+TGG 0.583326 1.4:+80808882 MS.gene99646:CDS
ACACCTGTTTCTGGATCAAG+AGG 0.590140 1.4:-80808306 None:intergenic
TCACCGTGTTTGATTAACCA+TGG 0.590166 1.4:-80808648 None:intergenic
TGTTAAGGTAACGTTGGTGA+AGG 0.590388 1.4:-80808473 None:intergenic
GATTAACCATGGTTCAGCGT+TGG 0.595052 1.4:-80808637 None:intergenic
CATCATAAGCAGCAGGAAGA+GGG 0.596512 1.4:-80808557 None:intergenic
ATGCTGTTAAGAAAAGTGGT+TGG 0.598526 1.4:+80809036 MS.gene99646:CDS
TTGTAGACACGGAGAAGAGG+TGG 0.600538 1.4:-80808234 None:intergenic
ATGATGATTTAAGAGACAGA+GGG 0.614435 1.4:+80809000 MS.gene99646:CDS
CAATGATGTTAAGGTAACGT+TGG 0.616784 1.4:-80808479 None:intergenic
CAATTCCACCAGGTGCATCA+GGG 0.618557 1.4:-80808890 None:intergenic
AAGTGGTTGGAAAGGTGATG+TGG 0.619960 1.4:+80809049 MS.gene99646:CDS
TCTTTGTAGACACGGAGAAG+AGG 0.629057 1.4:-80808237 None:intergenic
CTAGGAGCATCAATAGCCAA+AGG 0.633527 1.4:-80808930 None:intergenic
AATGGTGTTGAAACTTTACC+TGG 0.648005 1.4:+80808744 MS.gene99646:CDS
GTCTTAGTTTACTATCATGG+TGG 0.650549 1.4:+80808420 MS.gene99646:CDS
ACATCACCAACGCTGAACCA+TGG 0.651686 1.4:+80808631 MS.gene99646:CDS
GTTAAGAAAAGTGGTTGGAA+AGG 0.652072 1.4:+80809041 MS.gene99646:CDS
GAACCATGGTTAATCAAACA+CGG 0.676776 1.4:+80808645 MS.gene99646:CDS
GTGTACCCTGATGCACCTGG+TGG 0.678203 1.4:+80808885 MS.gene99646:CDS
AAAGGGTTATCAATTCCACC+AGG 0.710635 1.4:-80808900 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AACTCAGAATTCTATTGATA+TGG + chr1.4:80809124-80809143 MS.gene99646:CDS 25.0%
! ACAAAATTCCAAACTTTCAT+TGG - chr1.4:80808867-80808886 None:intergenic 25.0%
!!! TAAGATGTTGATTTTTGTTG+CGG + chr1.4:80808974-80808993 MS.gene99646:CDS 25.0%
AAAGTTCACCAATGAAAGTT+TGG + chr1.4:80808856-80808875 MS.gene99646:CDS 30.0%
AATGATGATTTAAGAGACAG+AGG + chr1.4:80808999-80809018 MS.gene99646:CDS 30.0%
ATAGCCAAAGGATTAATCAA+AGG - chr1.4:80808921-80808940 None:intergenic 30.0%
ATGATGATTTAAGAGACAGA+GGG + chr1.4:80809000-80809019 MS.gene99646:CDS 30.0%
CAACCAATAATATCCAAACT+AGG - chr1.4:80808951-80808970 None:intergenic 30.0%
GCAACAAAAATCAACATCTT+AGG - chr1.4:80808975-80808994 None:intergenic 30.0%
TAACCCTTTGATTAATCCTT+TGG + chr1.4:80808914-80808933 MS.gene99646:CDS 30.0%
TAGCCAAAGGATTAATCAAA+GGG - chr1.4:80808920-80808939 None:intergenic 30.0%
TATCACCACCAATGTAAAAA+CGG - chr1.4:80808680-80808699 None:intergenic 30.0%
TCAATAGAATTCTGAGTTTC+AGG - chr1.4:80809122-80809141 None:intergenic 30.0%
! AAGTTCTCTGTCTATTTCTT+TGG - chr1.4:80808214-80808233 None:intergenic 30.0%
! TTTTGTCAGAATCAGTTGAA+GGG + chr1.4:80808826-80808845 MS.gene99646:CDS 30.0%
!! GATTTTGACCGTTTTTACAT+TGG + chr1.4:80808669-80808688 MS.gene99646:CDS 30.0%
!! TACTTGCTTTTCCTCTATTT+TGG + chr1.4:80808790-80808809 MS.gene99646:CDS 30.0%
!!! AAGATGTTGATTTTTGTTGC+GGG + chr1.4:80808975-80808994 MS.gene99646:CDS 30.0%
ATGCTGTTAAGAAAAGTGGT+TGG + chr1.4:80809036-80809055 MS.gene99646:CDS 35.0%
ATTTAAGAGACAGAGGGATT+TGG + chr1.4:80809006-80809025 MS.gene99646:CDS 35.0%
CAATGATGTTAAGGTAACGT+TGG - chr1.4:80808482-80808501 None:intergenic 35.0%
CCATGATAGTAAACTAAGAC+CGG - chr1.4:80808420-80808439 None:intergenic 35.0%
CCTGGTGAAGTAAAAATTAG+AGG + chr1.4:80808762-80808781 MS.gene99646:CDS 35.0%
CTTGTGAAGCAATGATGTTA+AGG - chr1.4:80808491-80808510 None:intergenic 35.0%
GAACCATGGTTAATCAAACA+CGG + chr1.4:80808645-80808664 MS.gene99646:CDS 35.0%
GAATACGTGCAGAGATTAAT+GGG - chr1.4:80808362-80808381 None:intergenic 35.0%
GCTCCTAGTTTGGATATTAT+TGG + chr1.4:80808945-80808964 MS.gene99646:CDS 35.0%
GTCTTAGTTTACTATCATGG+TGG + chr1.4:80808420-80808439 MS.gene99646:CDS 35.0%
GTTAAGAAAAGTGGTTGGAA+AGG + chr1.4:80809041-80809060 MS.gene99646:CDS 35.0%
TACGATGCTGTTAAGAAAAG+TGG + chr1.4:80809032-80809051 MS.gene99646:CDS 35.0%
TGAATACGTGCAGAGATTAA+TGG - chr1.4:80808363-80808382 None:intergenic 35.0%
! AATGGTGTTGAAACTTTACC+TGG + chr1.4:80808744-80808763 MS.gene99646:CDS 35.0%
! CCTCTAATTTTTACTTCACC+AGG - chr1.4:80808765-80808784 None:intergenic 35.0%
! GTTTTGTCAGAATCAGTTGA+AGG + chr1.4:80808825-80808844 MS.gene99646:CDS 35.0%
! TCAACTGATTCTGACAAAAC+CGG - chr1.4:80808825-80808844 None:intergenic 35.0%
!! TTTGACCGTTTTTACATTGG+TGG + chr1.4:80808672-80808691 MS.gene99646:CDS 35.0%
!!! AGATGTTGATTTTTGTTGCG+GGG + chr1.4:80808976-80808995 MS.gene99646:CDS 35.0%
!!! ATGGTTGGTTTTCTCTCAAA+TGG + chr1.4:80808580-80808599 MS.gene99646:CDS 35.0%
!!! TCTATTTTGGAGTTCGAAAC+CGG + chr1.4:80808803-80808822 MS.gene99646:CDS 35.0%
AAAGGGTTATCAATTCCACC+AGG - chr1.4:80808903-80808922 None:intergenic 40.0%
ATTCCTCTTGATCCAGAAAC+AGG + chr1.4:80808303-80808322 MS.gene99646:CDS 40.0%
CAACGAAACTCAAAAGCTTC+CGG + chr1.4:80808398-80808417 MS.gene99646:CDS 40.0%
CATAATGCACTTCTTCGTGT+TGG + chr1.4:80808720-80808739 MS.gene99646:CDS 40.0%
CCGGTCTTAGTTTACTATCA+TGG + chr1.4:80808417-80808436 MS.gene99646:CDS 40.0%
CTGTTCCATCTTTGTAGACA+CGG - chr1.4:80808248-80808267 None:intergenic 40.0%
GGAACAGTTGAACGTTTCTT+AGG + chr1.4:80808261-80808280 MS.gene99646:CDS 40.0%
GGTTTCGAACTCCAAAATAG+AGG - chr1.4:80808804-80808823 None:intergenic 40.0%
TCACCGTGTTTGATTAACCA+TGG - chr1.4:80808651-80808670 None:intergenic 40.0%
TTTGATGAGACACCTGTTTC+TGG - chr1.4:80808318-80808337 None:intergenic 40.0%
! GTGGAACTTGTTCATGTTGA+AGG + chr1.4:80809068-80809087 MS.gene99646:CDS 40.0%
! GTTTCTGGATCAAGAGGAAT+TGG - chr1.4:80808303-80808322 None:intergenic 40.0%
! TGTTAAGGTAACGTTGGTGA+AGG - chr1.4:80808476-80808495 None:intergenic 40.0%
!! GAGTTTCGTTGGTGAGTTTT+GGG - chr1.4:80808389-80808408 None:intergenic 40.0%
!! TACATTGGTGGTGATACTTC+AGG + chr1.4:80808684-80808703 MS.gene99646:CDS 40.0%
!! TGAGTTTCGTTGGTGAGTTT+TGG - chr1.4:80808390-80808409 None:intergenic 40.0%
AAGTGGTTGGAAAGGTGATG+TGG + chr1.4:80809049-80809068 MS.gene99646:CDS 45.0%
CAACCATCATCATAAGCAGC+AGG - chr1.4:80808567-80808586 None:intergenic 45.0%
CATCATAAGCAGCAGGAAGA+GGG - chr1.4:80808560-80808579 None:intergenic 45.0%
CTTCTCCGTGTCTACAAAGA+TGG + chr1.4:80808240-80808259 MS.gene99646:CDS 45.0%
GATTAACCATGGTTCAGCGT+TGG - chr1.4:80808640-80808659 None:intergenic 45.0%
GCACTTCTTCGTGTTGGAAA+TGG + chr1.4:80808726-80808745 MS.gene99646:CDS 45.0%
GGCTATTGATGCTCCTAGTT+TGG + chr1.4:80808935-80808954 MS.gene99646:CDS 45.0%
TCATCATAAGCAGCAGGAAG+AGG - chr1.4:80808561-80808580 None:intergenic 45.0%
TCTGGATCAAGAGGAATTGG+TGG - chr1.4:80808300-80808319 None:intergenic 45.0%
TCTTTGTAGACACGGAGAAG+AGG - chr1.4:80808240-80808259 None:intergenic 45.0%
! CTTCCTGCTGCTTATGATGA+TGG + chr1.4:80808561-80808580 MS.gene99646:CDS 45.0%
! GGTGATGTCGTTGTTGTTGA+TGG - chr1.4:80808619-80808638 None:intergenic 45.0%
!! ACACCTGTTTCTGGATCAAG+AGG - chr1.4:80808309-80808328 None:intergenic 45.0%
!! CTAGGAGCATCAATAGCCAA+AGG - chr1.4:80808933-80808952 None:intergenic 45.0%
!! CTGCTGCTTATGATGATGGT+TGG + chr1.4:80808565-80808584 MS.gene99646:CDS 45.0%
!!! CGGAAGCTTTTGAGTTTCGT+TGG - chr1.4:80808400-80808419 None:intergenic 45.0%
!!! TTTCGTTGGTGAGTTTTGGG+AGG - chr1.4:80808386-80808405 None:intergenic 45.0%
ACATCACCAACGCTGAACCA+TGG + chr1.4:80808631-80808650 MS.gene99646:CDS 50.0%
CAATTCCACCAGGTGCATCA+GGG - chr1.4:80808893-80808912 None:intergenic 50.0%
TCAATTCCACCAGGTGCATC+AGG - chr1.4:80808894-80808913 None:intergenic 50.0%
TTGTAGACACGGAGAAGAGG+TGG - chr1.4:80808237-80808256 None:intergenic 50.0%
TTTGTGTACCCTGATGCACC+TGG + chr1.4:80808882-80808901 MS.gene99646:CDS 50.0%
GTGTACCCTGATGCACCTGG+TGG + chr1.4:80808885-80808904 MS.gene99646:CDS 60.0%
!! GCAGCAGGAAGAGGGTGTTC+TGG - chr1.4:80808552-80808571 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 80808198 80809175 80808198 ID=MS.gene99646
chr1.4 mRNA 80808198 80809175 80808198 ID=MS.gene99646.t1;Parent=MS.gene99646
chr1.4 exon 80808198 80809175 80808198 ID=MS.gene99646.t1.exon1;Parent=MS.gene99646.t1
chr1.4 CDS 80808198 80809175 80808198 ID=cds.MS.gene99646.t1;Parent=MS.gene99646.t1
Gene Sequence

>MS.gene99646

ATGGCTTCTTCAACCAAAGAAATAGACAGAGAACTTCCACCTCTTCTCCGTGTCTACAAAGATGGAACAGTTGAACGTTTCTTAGGCTCTAAAATCGTACCACCAATTCCTCTTGATCCAGAAACAGGTGTCTCATCAAAAGACATAATCATTTCACAAAACCCATTAATCTCTGCACGTATTCACCTCCCAAAACTCACCAACGAAACTCAAAAGCTTCCGGTCTTAGTTTACTATCATGGTGGTGCTTTTTGTCTTGAATCAGCTTTTTCTTTCCTTCACCAACGTTACCTTAACATCATTGCTTCACAAGCAAATGTTCTTGTTGTTTCTGTTGAATATAGACTTGCACCAGAACACCCTCTTCCTGCTGCTTATGATGATGGTTGGTTTTCTCTCAAATGGATCACTTCTCATTCCATCAACAACAACGACATCACCAACGCTGAACCATGGTTAATCAAACACGGTGATTTTGACCGTTTTTACATTGGTGGTGATACTTCAGGTGCAAATATTGCACATAATGCACTTCTTCGTGTTGGAAATGGTGTTGAAACTTTACCTGGTGAAGTAAAAATTAGAGGAGCATTACTTGCTTTTCCTCTATTTTGGAGTTCGAAACCGGTTTTGTCAGAATCAGTTGAAGGGCATGAACAAAGTTCACCAATGAAAGTTTGGAATTTTGTGTACCCTGATGCACCTGGTGGAATTGATAACCCTTTGATTAATCCTTTGGCTATTGATGCTCCTAGTTTGGATATTATTGGTTGTCCTAAGATGTTGATTTTTGTTGCGGGGAATGATGATTTAAGAGACAGAGGGATTTGGTACTACGATGCTGTTAAGAAAAGTGGTTGGAAAGGTGATGTGGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAAACTCAGAATTCTATTGATATGGTCAAACGTATTGCTTCTTTTCTTGTTTGA
Protein sequence

>MS.gene99646.t1

MASSTKEIDRELPPLLRVYKDGTVERFLGSKIVPPIPLDPETGVSSKDIIISQNPLISARIHLPKLTNETQKLPVLVYYHGGAFCLESAFSFLHQRYLNIIASQANVLVVSVEYRLAPEHPLPAAYDDGWFSLKWITSHSINNNDITNAEPWLIKHGDFDRFYIGGDTSGANIAHNALLRVGNGVETLPGEVKIRGALLAFPLFWSSKPVLSESVEGHEQSSPMKVWNFVYPDAPGGIDNPLINPLAIDAPSLDIIGCPKMLIFVAGNDDLRDRGIWYYDAVKKSGWKGDVELVHVEGEEHCFQIYHPETQNSIDMVKRIASFLV