Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99747.t1 | XP_003595772.1 | 91.3 | 732 | 63 | 1 | 1 | 732 | 1 | 731 | 0.00E+00 | 1201.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99747.t1 | G7IIZ7 | 91.3 | 732 | 63 | 1 | 1 | 732 | 1 | 731 | 0.0e+00 | 1201.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056174 | MS.gene99747 | 0.825722 | 4.02E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99747.t1 | MTR_2g060670 | 91.393 | 732 | 62 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1353 |
MS.gene99747.t1 | MTR_2g060670 | 89.280 | 653 | 68 | 2 | 1 | 653 | 1 | 651 | 0.0 | 1160 |
MS.gene99747.t1 | MTR_7g015170 | 52.968 | 219 | 100 | 1 | 493 | 711 | 43 | 258 | 8.02e-80 | 256 |
MS.gene99747.t1 | MTR_7g015180 | 52.838 | 229 | 105 | 1 | 483 | 711 | 39 | 264 | 1.55e-79 | 255 |
MS.gene99747.t1 | MTR_7g015190 | 49.778 | 225 | 101 | 2 | 493 | 712 | 87 | 304 | 1.17e-74 | 244 |
MS.gene99747.t1 | MTR_7g015150 | 51.163 | 215 | 102 | 1 | 497 | 711 | 70 | 281 | 1.75e-74 | 243 |
MS.gene99747.t1 | MTR_7g015130 | 50.885 | 226 | 101 | 2 | 493 | 711 | 43 | 265 | 5.63e-74 | 241 |
MS.gene99747.t1 | MTR_7g015130 | 50.673 | 223 | 100 | 2 | 496 | 711 | 11 | 230 | 2.40e-72 | 235 |
MS.gene99747.t1 | MTR_7g015190 | 49.345 | 229 | 104 | 2 | 489 | 712 | 117 | 338 | 7.08e-71 | 235 |
MS.gene99747.t1 | MTR_7g015190 | 42.739 | 241 | 110 | 3 | 493 | 712 | 88 | 321 | 1.12e-61 | 210 |
MS.gene99747.t1 | MTR_7g015190 | 42.739 | 241 | 110 | 3 | 493 | 712 | 87 | 320 | 1.34e-61 | 209 |
MS.gene99747.t1 | MTR_7g015130 | 52.542 | 177 | 74 | 2 | 493 | 662 | 43 | 216 | 3.32e-58 | 197 |
MS.gene99747.t1 | MTR_7g015130 | 51.667 | 180 | 77 | 2 | 493 | 665 | 43 | 219 | 1.03e-57 | 196 |
MS.gene99747.t1 | MTR_7g103560 | 38.938 | 226 | 130 | 3 | 493 | 715 | 42 | 262 | 1.34e-48 | 172 |
MS.gene99747.t1 | MTR_7g103570 | 39.189 | 222 | 128 | 2 | 493 | 712 | 36 | 252 | 9.11e-47 | 167 |
MS.gene99747.t1 | MTR_7g103410 | 41.989 | 181 | 98 | 3 | 530 | 708 | 66 | 241 | 5.78e-44 | 159 |
MS.gene99747.t1 | MTR_7g103570 | 39.474 | 152 | 85 | 2 | 493 | 642 | 36 | 182 | 8.95e-32 | 124 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99747.t1 | AT3G29760 | 51.337 | 187 | 91 | 0 | 522 | 708 | 330 | 516 | 1.17e-68 | 235 |
MS.gene99747.t1 | AT3G29760 | 51.337 | 187 | 91 | 0 | 522 | 708 | 330 | 516 | 1.17e-68 | 235 |
MS.gene99747.t1 | AT4G26190 | 50.000 | 216 | 104 | 2 | 495 | 710 | 844 | 1055 | 1.01e-64 | 233 |
MS.gene99747.t1 | AT4G26190 | 50.000 | 216 | 104 | 2 | 495 | 710 | 844 | 1055 | 1.01e-64 | 233 |
MS.gene99747.t1 | AT4G26190 | 50.000 | 216 | 104 | 2 | 495 | 710 | 844 | 1055 | 1.01e-64 | 233 |
MS.gene99747.t1 | AT4G26190 | 50.000 | 216 | 104 | 2 | 495 | 710 | 844 | 1055 | 1.01e-64 | 233 |
MS.gene99747.t1 | AT4G26190 | 50.000 | 216 | 104 | 2 | 495 | 710 | 844 | 1055 | 1.01e-64 | 233 |
MS.gene99747.t1 | AT3G29760 | 44.240 | 217 | 95 | 1 | 522 | 712 | 330 | 546 | 2.17e-62 | 219 |
MS.gene99747.t1 | AT3G29760 | 52.000 | 125 | 60 | 0 | 522 | 646 | 330 | 454 | 1.65e-44 | 167 |
MS.gene99747.t1 | AT2G36540 | 39.326 | 178 | 89 | 4 | 530 | 707 | 86 | 244 | 3.23e-34 | 131 |
MS.gene99747.t1 | AT2G36550 | 39.062 | 128 | 70 | 2 | 580 | 707 | 17 | 136 | 2.87e-23 | 96.7 |
MS.gene99747.t1 | AT3G29760 | 54.098 | 61 | 28 | 0 | 521 | 581 | 329 | 389 | 6.06e-19 | 90.5 |
Find 162 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCCATAGCCAACCTTTCT+AGG | 0.203018 | 2.1:+34693597 | None:intergenic |
ATTTAACATCTAAATTGTTT+TGG | 0.222405 | 2.1:+34697167 | None:intergenic |
GTCTTCCTTCCTCTTCTCTT+TGG | 0.226729 | 2.1:+34697634 | None:intergenic |
TGATGGATTTGCTGGTCTTA+TGG | 0.237488 | 2.1:+34693529 | None:intergenic |
ACAGATTTCATGTGGGAATT+TGG | 0.247599 | 2.1:-34695919 | MS.gene99747:CDS |
TGACGTAATCAAACATCTTA+TGG | 0.252318 | 2.1:-34695723 | MS.gene99747:CDS |
CATGCTGAGGTTACAATAAA+TGG | 0.269436 | 2.1:-34696242 | MS.gene99747:CDS |
CAAGGAATCACTTGTTTCCT+TGG | 0.276136 | 2.1:+34696745 | None:intergenic |
ACATTGAATGGGATGTTCTA+AGG | 0.284497 | 2.1:+34697015 | None:intergenic |
GGGAGTGATATCCAAGAAAA+AGG | 0.290239 | 2.1:-34697385 | MS.gene99747:CDS |
TTTGTGTCACGGAATGAATT+TGG | 0.303123 | 2.1:-34693560 | MS.gene99747:CDS |
AAGGAATCACTTGTTTCCTT+GGG | 0.307311 | 2.1:+34696746 | None:intergenic |
GATGGATTTGCTGGTCTTAT+GGG | 0.309412 | 2.1:+34693530 | None:intergenic |
ACGGAATCACCGGTTTCGTC+AGG | 0.312909 | 2.1:+34697253 | None:intergenic |
CCGACAAATCATGAACTTCT+AGG | 0.320907 | 2.1:+34697194 | None:intergenic |
CAGACAAATCATGAACTTCT+AGG | 0.327204 | 2.1:+34696687 | None:intergenic |
ACCATTGACAGATAGCTTAA+TGG | 0.349737 | 2.1:-34696549 | MS.gene99747:CDS |
ACCGGTGATTCCGTGAAGAT+TGG | 0.354378 | 2.1:-34697244 | MS.gene99747:CDS |
AGAGAAGCCTCTTGTGTTGA+AGG | 0.358433 | 2.1:-34694299 | MS.gene99747:CDS |
TAACCCCATGATGGATTTGC+TGG | 0.377447 | 2.1:+34693521 | None:intergenic |
CCTCAGTCAGTCTGCAGAAA+AGG | 0.380516 | 2.1:-34696909 | MS.gene99747:CDS |
ACTACCTAATGACGAGTCTT+TGG | 0.382177 | 2.1:+34694008 | None:intergenic |
CTTCTCATCCTTGATGTGAA+TGG | 0.383379 | 2.1:-34696155 | MS.gene99747:CDS |
GACGTAATCAAACATCTTAT+GGG | 0.389701 | 2.1:-34695722 | MS.gene99747:CDS |
CAAAGTTGAAGCTGAGGAAA+TGG | 0.394805 | 2.1:-34696495 | MS.gene99747:CDS |
TGGGAGTCTGTTAAAGAATC+AGG | 0.398715 | 2.1:-34697224 | MS.gene99747:CDS |
TCGCATTGAATGGGATGTTC+CGG | 0.402465 | 2.1:+34697520 | None:intergenic |
CAGAAAGCTGTGGGAGATGC+TGG | 0.416429 | 2.1:-34694272 | MS.gene99747:CDS |
TGAAGAAATAAATGCTAGTC+AGG | 0.418633 | 2.1:-34696396 | MS.gene99747:CDS |
TTCTTTGAGTTGCTGATAAT+AGG | 0.421020 | 2.1:+34696182 | None:intergenic |
ATCAGTAGACGGACATTGAA+TGG | 0.421207 | 2.1:+34697003 | None:intergenic |
GGATTCACAAGCGCCTTGTA+AGG | 0.422207 | 2.1:+34694184 | None:intergenic |
CAGGACCTAAAGGTGATCTT+CGG | 0.422676 | 2.1:-34693625 | MS.gene99747:CDS |
ATCACTTGTTTCCTTGGGGT+TGG | 0.428571 | 2.1:+34696751 | None:intergenic |
CATGCCGAGGTTACTAGAAA+TGG | 0.429388 | 2.1:-34696368 | MS.gene99747:CDS |
AGCTTCAACTTTGTTCTGAT+CGG | 0.429946 | 2.1:+34696505 | None:intergenic |
CGAGTCAAACACATTATTAG+TGG | 0.430594 | 2.1:-34694215 | MS.gene99747:CDS |
GCGGTAAGAGTAGGGGAATA+TGG | 0.433872 | 2.1:+34694041 | None:intergenic |
CCGGTGATTCCGTGAAGATT+GGG | 0.443133 | 2.1:-34697243 | MS.gene99747:CDS |
TTGCTGGTCTTATGGGCCGC+TGG | 0.443814 | 2.1:+34693537 | None:intergenic |
TAGTGGTAGCGGTAAGAGTA+GGG | 0.444861 | 2.1:+34694033 | None:intergenic |
TCCATTAAGCTATCTGTCAA+TGG | 0.447944 | 2.1:+34696548 | None:intergenic |
ATGAGTGGACTCGCATTGAA+TGG | 0.448065 | 2.1:+34697510 | None:intergenic |
GTTTCTACAAGTGGCGTCAC+TGG | 0.452817 | 2.1:+34696284 | None:intergenic |
ATCTTCGGGGTTACCTAGAA+AGG | 0.453241 | 2.1:-34693610 | MS.gene99747:CDS |
CTCAGTCAGTCTGCAGAAAA+GGG | 0.455438 | 2.1:-34696908 | MS.gene99747:CDS |
CCCTTCTCCCACGGAAGACC+AGG | 0.455750 | 2.1:+34694247 | None:intergenic |
CTAGCATTTGTTTCTACAAG+TGG | 0.456050 | 2.1:+34696275 | None:intergenic |
CTGTAGAAAATCATCACAAA+AGG | 0.457371 | 2.1:+34695952 | None:intergenic |
CTAGAAGTTCATGATTTGTC+GGG | 0.462806 | 2.1:-34697193 | MS.gene99747:CDS |
ATCACTTTGAACGGTACGTC+TGG | 0.465944 | 2.1:+34697612 | None:intergenic |
AGTTCCAACCCTGACGAAAC+CGG | 0.466795 | 2.1:-34697262 | MS.gene99747:CDS |
ATTTCTTCAAGTGGTGTCAC+TGG | 0.466818 | 2.1:+34696410 | None:intergenic |
AGTGCATTAAAACCTATTCA+AGG | 0.470229 | 2.1:-34696655 | MS.gene99747:CDS |
TAACAGACTCCCAATCTTCA+CGG | 0.471435 | 2.1:+34697234 | None:intergenic |
TACACCAAAGACTCGTCATT+AGG | 0.474034 | 2.1:-34694012 | MS.gene99747:intron |
TTACTATTAACAGGACCTAA+AGG | 0.478291 | 2.1:-34693635 | MS.gene99747:intron |
CCTCGGTCAAGCTGCAGAAA+AGG | 0.480624 | 2.1:-34697416 | MS.gene99747:CDS |
GGGATGTTCCGGAGGCATAT+CGG | 0.481069 | 2.1:+34697531 | None:intergenic |
CTCTGGAGTGCCACAACCAT+TGG | 0.482187 | 2.1:+34697081 | None:intergenic |
ACCATTTGCATCACTTTGAA+CGG | 0.482267 | 2.1:+34697603 | None:intergenic |
TATCAAGGAACCACCTATCC+AGG | 0.483711 | 2.1:-34696609 | MS.gene99747:CDS |
CTGAGTTCCTTCAACACAAG+AGG | 0.489571 | 2.1:+34694292 | None:intergenic |
CCCAATCTTCACGGAATCAC+CGG | 0.491865 | 2.1:+34697243 | None:intergenic |
AGGACCTAAAGGTGATCTTC+GGG | 0.495890 | 2.1:-34693624 | MS.gene99747:CDS |
TAACCCCGAAGATCACCTTT+AGG | 0.496208 | 2.1:+34693620 | None:intergenic |
ACCTGGTCTTCCGTGGGAGA+AGG | 0.498997 | 2.1:-34694248 | MS.gene99747:CDS |
ATATCGGATACAGATGTAGA+AGG | 0.499140 | 2.1:+34697547 | None:intergenic |
TGCTGGAACCTGGTCTTCCG+TGG | 0.501134 | 2.1:-34694255 | MS.gene99747:CDS |
TATCTGCTTCTACACAAGAT+TGG | 0.501894 | 2.1:+34697476 | None:intergenic |
CCTAGAAGTTCATGATTTGT+CGG | 0.502819 | 2.1:-34697194 | MS.gene99747:CDS |
ATCTGTATCCGATATGCCTC+CGG | 0.503222 | 2.1:-34697539 | MS.gene99747:CDS |
TGTAGAAACAAATGCTAGAC+AGG | 0.508354 | 2.1:-34696270 | MS.gene99747:CDS |
TAAGACCAGCAAATCCATCA+TGG | 0.509081 | 2.1:-34693526 | MS.gene99747:CDS |
TCTGGTTGATAATATCCGTT+AGG | 0.509489 | 2.1:+34696104 | None:intergenic |
CAAGTAATCCATTCACATCA+AGG | 0.511733 | 2.1:+34696147 | None:intergenic |
TTGAGATAGTAACCCCATGA+TGG | 0.512543 | 2.1:+34693512 | None:intergenic |
CTAGCATTTATTTCTTCAAG+TGG | 0.518745 | 2.1:+34696401 | None:intergenic |
GATTCACAAGCGCCTTGTAA+GGG | 0.521739 | 2.1:+34694185 | None:intergenic |
CCTGGTCTTCCGTGGGAGAA+GGG | 0.525975 | 2.1:-34694247 | MS.gene99747:CDS |
CTGTGGGAGATGCTGGAACC+TGG | 0.528430 | 2.1:-34694265 | MS.gene99747:CDS |
TCAGTAGACGGACATTGAAT+GGG | 0.531587 | 2.1:+34697004 | None:intergenic |
AAACAATGTACATTGTATCA+AGG | 0.534320 | 2.1:-34696624 | MS.gene99747:CDS |
GAAAGTGATGCCAATGGTTG+TGG | 0.538875 | 2.1:-34697091 | MS.gene99747:CDS |
TTGTTTACGCGAAAATAAAG+AGG | 0.539710 | 2.1:-34696945 | MS.gene99747:CDS |
CGGAATCACCGGTTTCGTCA+GGG | 0.541104 | 2.1:+34697254 | None:intergenic |
GTAGTGGTAGCGGTAAGAGT+AGG | 0.541377 | 2.1:+34694032 | None:intergenic |
TATGCCGGCGAATGAAGAAA+AGG | 0.541519 | 2.1:-34697449 | MS.gene99747:CDS |
CTCATTAATGCATCAGTAGA+CGG | 0.542297 | 2.1:+34696992 | None:intergenic |
TTACCTAGAAAGGTTGGCTA+TGG | 0.542675 | 2.1:-34693600 | MS.gene99747:CDS |
GATTCACATGAAGTTTCTGA+TGG | 0.543611 | 2.1:-34696572 | MS.gene99747:CDS |
TGTAGAAAATCATCACAAAA+GGG | 0.548066 | 2.1:+34695953 | None:intergenic |
CAAAGTGATGCAAATGGTTG+TGG | 0.548299 | 2.1:-34697598 | MS.gene99747:CDS |
AGTGGATGACTCCCCTTACA+AGG | 0.548716 | 2.1:-34694197 | MS.gene99747:CDS |
TACCCAACAAAAGACCAGTC+TGG | 0.549753 | 2.1:+34695688 | None:intergenic |
AATCATCATTGTGATGGTCC+TGG | 0.553906 | 2.1:+34696591 | None:intergenic |
CATTGAATGGGATGTTCTAA+GGG | 0.556529 | 2.1:+34697016 | None:intergenic |
TTGCTTTGACAGATTTCATG+TGG | 0.557900 | 2.1:-34695927 | MS.gene99747:CDS |
AAGACCAGCAAATCCATCAT+GGG | 0.558029 | 2.1:-34693525 | MS.gene99747:CDS |
ACCGTTCAAAGTGATGCAAA+TGG | 0.564207 | 2.1:-34697604 | MS.gene99747:CDS |
AGGAATCACTTGTTTCCTTG+GGG | 0.565322 | 2.1:+34696747 | None:intergenic |
TCGGGGTTACCTAGAAAGGT+TGG | 0.565362 | 2.1:-34693606 | MS.gene99747:CDS |
GAGAGTGATATCAAAGACAA+AGG | 0.568271 | 2.1:-34696878 | MS.gene99747:CDS |
AGAAGCAGATATTTGTATGC+CGG | 0.571762 | 2.1:-34697464 | MS.gene99747:CDS |
CAAATATCTGCTTCTACACA+TGG | 0.573059 | 2.1:+34696965 | None:intergenic |
TGGAACTCTCCCTTCTCCCA+CGG | 0.577021 | 2.1:+34694238 | None:intergenic |
CAAAGTTATAGAATCAGTCC+AGG | 0.577977 | 2.1:-34693492 | MS.gene99747:CDS |
CTAATAATGTGTTTGACTCG+TGG | 0.578502 | 2.1:+34694218 | None:intergenic |
ACGTAATCAAACATCTTATG+GGG | 0.578712 | 2.1:-34695721 | MS.gene99747:CDS |
AGAGTGATATCAAAGACAAA+GGG | 0.579882 | 2.1:-34696877 | MS.gene99747:CDS |
ATCACCGGTTTCGTCAGGGT+TGG | 0.580053 | 2.1:+34697258 | None:intergenic |
ATGACGAGTCTTTGGTGTAG+TGG | 0.581311 | 2.1:+34694016 | None:intergenic |
TGAGTGGACTCGCATTGAAT+GGG | 0.584447 | 2.1:+34697511 | None:intergenic |
TGCTTTGACAGATTTCATGT+GGG | 0.585279 | 2.1:-34695926 | MS.gene99747:CDS |
AACTGCTTAAAGAAGAAAGT+AGG | 0.586146 | 2.1:-34693434 | MS.gene99747:CDS |
CAGTCTGCAGAAAAGGGCAA+TGG | 0.588072 | 2.1:-34696902 | MS.gene99747:CDS |
GATACACCCTCAGCACCAGA+TGG | 0.592750 | 2.1:-34693464 | MS.gene99747:CDS |
ACCACCATTTCTAGTAACCT+CGG | 0.593453 | 2.1:+34696364 | None:intergenic |
TCTGTTAAAGAATCAGGATG+AGG | 0.593804 | 2.1:-34697218 | MS.gene99747:CDS |
GAAAAGGAGCAGAATATCCT+CGG | 0.597261 | 2.1:-34697433 | MS.gene99747:CDS |
AGTCTTTGGTGTAGTGGTAG+CGG | 0.599241 | 2.1:+34694022 | None:intergenic |
TTTACGCGAAAATAAAGAGG+AGG | 0.599515 | 2.1:-34696942 | MS.gene99747:CDS |
ATTCACAAGCGCCTTGTAAG+GGG | 0.602732 | 2.1:+34694186 | None:intergenic |
TTGTGATGGTCCTGGATAGG+TGG | 0.604165 | 2.1:+34696599 | None:intergenic |
ATACACCCTCAGCACCAGAT+GGG | 0.604493 | 2.1:-34693463 | MS.gene99747:CDS |
GAGCAAAGTATAAATGAGAA+CGG | 0.607866 | 2.1:-34696776 | MS.gene99747:CDS |
TTACGCGAAAATAAAGAGGA+GGG | 0.612168 | 2.1:-34696941 | MS.gene99747:CDS |
GCTGGAACCTGGTCTTCCGT+GGG | 0.613498 | 2.1:-34694254 | MS.gene99747:CDS |
ATGTCTACAAGACAAGATGT+AGG | 0.616091 | 2.1:+34696308 | None:intergenic |
TACACCCTCAGCACCAGATG+GGG | 0.616236 | 2.1:-34693462 | MS.gene99747:CDS |
TTGGCTCATTAACGCATGAG+TGG | 0.617870 | 2.1:+34697495 | None:intergenic |
AATATGGGACCAAAGAGAAG+AGG | 0.623110 | 2.1:-34697643 | MS.gene99747:CDS |
CTGCAGAAAAGGACAACGGA+GGG | 0.626630 | 2.1:-34697405 | MS.gene99747:CDS |
GAAGGAACTCAGAAAGCTGT+GGG | 0.628259 | 2.1:-34694281 | MS.gene99747:CDS |
TGAAGGAACTCAGAAAGCTG+TGG | 0.628781 | 2.1:-34694282 | MS.gene99747:CDS |
TCAGAACAAAGTTGAAGCTG+AGG | 0.629797 | 2.1:-34696501 | MS.gene99747:CDS |
TGAGAACGGTTCCAACCCCA+AGG | 0.629869 | 2.1:-34696762 | MS.gene99747:CDS |
TGGGACCAAAGAGAAGAGGA+AGG | 0.631194 | 2.1:-34697639 | MS.gene99747:CDS |
TATCTGCTTCTACACATGGT+GGG | 0.633870 | 2.1:+34696969 | None:intergenic |
GCCGAGGTTACTAGAAATGG+TGG | 0.635820 | 2.1:-34696365 | MS.gene99747:CDS |
AGTGGTAGCGGTAAGAGTAG+GGG | 0.639678 | 2.1:+34694034 | None:intergenic |
TCATTGTGATGGTCCTGGAT+AGG | 0.640594 | 2.1:+34696596 | None:intergenic |
TACGCGAAAATAAAGAGGAG+GGG | 0.643871 | 2.1:-34696940 | MS.gene99747:CDS |
CACGGAATGAATTTGGCCAG+CGG | 0.643882 | 2.1:-34693553 | MS.gene99747:CDS |
CATTGAATGGGATGTTCCGG+AGG | 0.644295 | 2.1:+34697523 | None:intergenic |
ACGTTCAAGAATTTGTGTCA+CGG | 0.652086 | 2.1:-34693571 | MS.gene99747:CDS |
CATGTGAATCATCATTGTGA+TGG | 0.652130 | 2.1:+34696585 | None:intergenic |
ATATCTGCTTCTACACATGG+TGG | 0.659622 | 2.1:+34696968 | None:intergenic |
CGTAATCAAACATCTTATGG+GGG | 0.667508 | 2.1:-34695720 | MS.gene99747:CDS |
AACGATATCACAATGCTCAG+TGG | 0.671623 | 2.1:-34696336 | MS.gene99747:CDS |
GCTGAGGTTACAATAAATGG+TGG | 0.675287 | 2.1:-34696239 | MS.gene99747:CDS |
AAAGATATCACAATGCTCAG+TGG | 0.676550 | 2.1:-34696210 | MS.gene99747:CDS |
AGACCAGCAAATCCATCATG+GGG | 0.683518 | 2.1:-34693524 | MS.gene99747:CDS |
TGTGTCAGTGATGTTCCTAA+CGG | 0.684708 | 2.1:-34696119 | MS.gene99747:CDS |
ACACCCTCAGCACCAGATGG+GGG | 0.693380 | 2.1:-34693461 | MS.gene99747:CDS |
GCTGCAGAAAAGGACAACGG+AGG | 0.707749 | 2.1:-34697406 | MS.gene99747:CDS |
GGACCTAAAGGTGATCTTCG+GGG | 0.707762 | 2.1:-34693623 | MS.gene99747:CDS |
CAAGCTGCAGAAAAGGACAA+CGG | 0.726493 | 2.1:-34697409 | MS.gene99747:CDS |
GTAGTCGAAAGTGATGCCAA+TGG | 0.730707 | 2.1:-34697097 | MS.gene99747:CDS |
TAGTCAGGTAGATCATGCCG+AGG | 0.734515 | 2.1:-34696381 | MS.gene99747:CDS |
TAGACAGGTAGATCATGCTG+AGG | 0.735159 | 2.1:-34696255 | MS.gene99747:CDS |
TCTGATGATGAATAATGACG+AGG | 0.739941 | 2.1:-34696711 | MS.gene99747:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATGTTAAAATTAAAC+AGG | + | chr2.1:34695599-34695618 | None:intergenic | 10.0% |
!! | TTTATATATGGATTTCAATT+TGG | - | chr2.1:34696524-34696543 | MS.gene99747:CDS | 15.0% |
!!! | AAAATGAATTTTAGTAATTC+TGG | + | chr2.1:34695668-34695687 | None:intergenic | 15.0% |
!!! | AGAATTACTAAAATTCATTT+TGG | - | chr2.1:34695667-34695686 | MS.gene99747:intron | 15.0% |
!!! | ATTTAACATCTAAATTGTTT+TGG | + | chr2.1:34693906-34693925 | None:intergenic | 15.0% |
!!! | TATTCTAATTCTTTAGTTTT+TGG | - | chr2.1:34695408-34695427 | MS.gene99747:intron | 15.0% |
!!! | TTTAACATCTAAATTGTTTT+GGG | + | chr2.1:34693905-34693924 | None:intergenic | 15.0% |
!! | AATAAGATAAAATCAATCAC+AGG | + | chr2.1:34695202-34695221 | None:intergenic | 20.0% |
!! | AATTAAAAAAACATACACCT+TGG | + | chr2.1:34695999-34696018 | None:intergenic | 20.0% |
!! | AATTAGCAATAATAAGCAAA+AGG | + | chr2.1:34697121-34697140 | None:intergenic | 20.0% |
!! | AGAAAAGTAAAAAGAGAAAA+AGG | - | chr2.1:34693932-34693951 | MS.gene99747:intron | 20.0% |
!!! | GAAGCAATAACTTTTATATA+TGG | - | chr2.1:34696512-34696531 | MS.gene99747:CDS | 20.0% |
!!! | TACTTCATTACAATTTTACT+GGG | - | chr2.1:34695532-34695551 | MS.gene99747:intron | 20.0% |
!!! | TAGTTTTTGGCATAATTTTA+GGG | - | chr2.1:34695421-34695440 | MS.gene99747:intron | 20.0% |
!!! | TCAATATATATTGAAAGCAT+TGG | + | chr2.1:34697180-34697199 | None:intergenic | 20.0% |
!!! | TCTCTATCTTTTTAAAGTAT+TGG | - | chr2.1:34695941-34695960 | MS.gene99747:CDS | 20.0% |
!!! | TTACTTGTTAGTAAATGATA+TGG | + | chr2.1:34696473-34696492 | None:intergenic | 20.0% |
!!! | TTAGTTTTTGGCATAATTTT+AGG | - | chr2.1:34695420-34695439 | MS.gene99747:intron | 20.0% |
! | AAACAATGTACATTGTATCA+AGG | - | chr2.1:34694446-34694465 | MS.gene99747:intron | 25.0% |
! | AAAGTAAAAAGAGAAAAAGG+AGG | - | chr2.1:34693935-34693954 | MS.gene99747:intron | 25.0% |
! | AACTATCAAGAATATGTATG+GGG | - | chr2.1:34695865-34695884 | MS.gene99747:intron | 25.0% |
! | AATTGTAATGAAGTACAACT+AGG | + | chr2.1:34695527-34695546 | None:intergenic | 25.0% |
! | ACTTTGAATATGTCAATCAA+TGG | + | chr2.1:34697145-34697164 | None:intergenic | 25.0% |
! | AGAACTATCAAGAATATGTA+TGG | - | chr2.1:34695863-34695882 | MS.gene99747:intron | 25.0% |
! | AGAAGTTGTAAAAATGAACA+TGG | - | chr2.1:34693765-34693784 | MS.gene99747:intron | 25.0% |
! | AGAAGTTGTAAAAATGGATA+TGG | - | chr2.1:34694272-34694291 | MS.gene99747:CDS | 25.0% |
! | AGTTAAGAGAGGAAATAAAT+TGG | - | chr2.1:34696097-34696116 | MS.gene99747:CDS | 25.0% |
! | CTATATCTCAAGTTAGTATT+GGG | - | chr2.1:34695483-34695502 | MS.gene99747:intron | 25.0% |
! | CTTAATGCATAATGAATGAA+AGG | + | chr2.1:34696931-34696950 | None:intergenic | 25.0% |
! | GAACTATCAAGAATATGTAT+GGG | - | chr2.1:34695864-34695883 | MS.gene99747:intron | 25.0% |
! | GTTAGCAATTAATTTCTACT+TGG | - | chr2.1:34696658-34696677 | MS.gene99747:CDS | 25.0% |
! | TCTATATCTCAAGTTAGTAT+TGG | - | chr2.1:34695482-34695501 | MS.gene99747:intron | 25.0% |
! | TGTAGAAAATCATCACAAAA+GGG | + | chr2.1:34695120-34695139 | None:intergenic | 25.0% |
! | TGTGTTAGAAGTTGTAAAAA+TGG | - | chr2.1:34693759-34693778 | MS.gene99747:intron | 25.0% |
! | TTATTCGCATTTCAGAATTT+AGG | - | chr2.1:34695272-34695291 | MS.gene99747:intron | 25.0% |
! | TTTATTTACTCTCTTCCTAT+TGG | + | chr2.1:34697314-34697333 | None:intergenic | 25.0% |
!! | GTACTTCATTACAATTTTAC+TGG | - | chr2.1:34695531-34695550 | MS.gene99747:intron | 25.0% |
!! | GTTTGAATTTTTCCTTGAAT+AGG | + | chr2.1:34694430-34694449 | None:intergenic | 25.0% |
!! | TTTTATGATATAGTCCAACT+TGG | - | chr2.1:34696030-34696049 | MS.gene99747:intron | 25.0% |
!!! | AGTTTTTGGCATAATTTTAG+GGG | - | chr2.1:34695422-34695441 | MS.gene99747:intron | 25.0% |
!!! | ATTCTTGATAGTTCTAATGT+AGG | + | chr2.1:34695858-34695877 | None:intergenic | 25.0% |
!!! | TGTGTTTATTAGTTTGTCTT+GGG | - | chr2.1:34695225-34695244 | MS.gene99747:intron | 25.0% |
!!! | TTGTGTTTATTAGTTTGTCT+TGG | - | chr2.1:34695224-34695243 | MS.gene99747:intron | 25.0% |
!!! | TTTGATGAAAAAGTATTCTC+TGG | + | chr2.1:34694009-34694028 | None:intergenic | 25.0% |
AAAAACTTCTACATCTGCAA+TGG | - | chr2.1:34694026-34694045 | MS.gene99747:CDS | 30.0% | |
AACTGCTTAAAGAAGAAAGT+AGG | - | chr2.1:34697636-34697655 | MS.gene99747:CDS | 30.0% | |
AATTCAACCAAGATCAGATA+TGG | + | chr2.1:34695058-34695077 | None:intergenic | 30.0% | |
ACGTAATCAAACATCTTATG+GGG | - | chr2.1:34695349-34695368 | MS.gene99747:intron | 30.0% | |
ACTATCAAGAATATGTATGG+GGG | - | chr2.1:34695866-34695885 | MS.gene99747:intron | 30.0% | |
AGAGTGATATCAAAGACAAA+GGG | - | chr2.1:34694193-34694212 | MS.gene99747:CDS | 30.0% | |
AGGTCCTGTTAATAGTAAAA+AGG | + | chr2.1:34697433-34697452 | None:intergenic | 30.0% | |
AGTGCATTAAAACCTATTCA+AGG | - | chr2.1:34694415-34694434 | MS.gene99747:intron | 30.0% | |
CATCTGAAAACAATTCCATT+GGG | + | chr2.1:34697002-34697021 | None:intergenic | 30.0% | |
CTGTAGAAAATCATCACAAA+AGG | + | chr2.1:34695121-34695140 | None:intergenic | 30.0% | |
GACGTAATCAAACATCTTAT+GGG | - | chr2.1:34695348-34695367 | MS.gene99747:intron | 30.0% | |
GAGCAAAGTATAAATGAGAA+CGG | - | chr2.1:34693787-34693806 | MS.gene99747:intron | 30.0% | |
GCAATAATAAGCAAAAGGTA+AGG | + | chr2.1:34697116-34697135 | None:intergenic | 30.0% | |
GGATTTCAATTTGGACAAAA+TGG | - | chr2.1:34696533-34696552 | MS.gene99747:CDS | 30.0% | |
GTCATCAAAGTTGTTTGATA+TGG | - | chr2.1:34697338-34697357 | MS.gene99747:CDS | 30.0% | |
TAAGAGAGGAAATAAATTGG+AGG | - | chr2.1:34696100-34696119 | MS.gene99747:CDS | 30.0% | |
TACGATGAGTGATTATTAGA+GGG | - | chr2.1:34695731-34695750 | MS.gene99747:CDS | 30.0% | |
TGAAGAAATAAATGCTAGTC+AGG | - | chr2.1:34694674-34694693 | MS.gene99747:intron | 30.0% | |
TGACGTAATCAAACATCTTA+TGG | - | chr2.1:34695347-34695366 | MS.gene99747:intron | 30.0% | |
TGATTAGTGATAGAACATTG+TGG | - | chr2.1:34696279-34696298 | MS.gene99747:CDS | 30.0% | |
TTACTATTAACAGGACCTAA+AGG | - | chr2.1:34697435-34697454 | MS.gene99747:CDS | 30.0% | |
TTGAAGAGCTAGAAAAGATA+GGG | - | chr2.1:34695822-34695841 | MS.gene99747:intron | 30.0% | |
TTGTTTACGCGAAAATAAAG+AGG | - | chr2.1:34694125-34694144 | MS.gene99747:intron | 30.0% | |
! | ACGATACTGCAATATTTTGT+TGG | + | chr2.1:34695572-34695591 | None:intergenic | 30.0% |
! | CAAGTTAGTATTGGGATAAA+TGG | - | chr2.1:34695491-34695510 | MS.gene99747:intron | 30.0% |
! | CAATTTGGACAAAATGGATT+TGG | - | chr2.1:34696539-34696558 | MS.gene99747:CDS | 30.0% |
! | CATCAGACTTTTATTGTTCA+AGG | + | chr2.1:34694346-34694365 | None:intergenic | 30.0% |
! | CTAGCATTTATTTCTTCAAG+TGG | + | chr2.1:34694672-34694691 | None:intergenic | 30.0% |
! | GAATTGTTTTCAGATGCATA+CGG | - | chr2.1:34697006-34697025 | MS.gene99747:CDS | 30.0% |
! | TTCCATGGTTTTCAGTTATT+TGG | - | chr2.1:34695767-34695786 | MS.gene99747:intron | 30.0% |
!! | ATTTTAGGGGATATTTGGTT+AGG | - | chr2.1:34695435-34695454 | MS.gene99747:intron | 30.0% |
!! | GCATAATTTTAGGGGATATT+TGG | - | chr2.1:34695430-34695449 | MS.gene99747:intron | 30.0% |
!! | TTCTTTGAGTTGCTGATAAT+AGG | + | chr2.1:34694891-34694910 | None:intergenic | 30.0% |
!!! | ATTTTGGTTTTATGCACTTG+GGG | - | chr2.1:34695683-34695702 | MS.gene99747:intron | 30.0% |
!!! | CATTTTGGTTTTATGCACTT+GGG | - | chr2.1:34695682-34695701 | MS.gene99747:intron | 30.0% |
!!! | GAATTTTGTTGTTGTACAGT+GGG | + | chr2.1:34696734-34696753 | None:intergenic | 30.0% |
!!! | TCATTTTGGTTTTATGCACT+TGG | - | chr2.1:34695681-34695700 | MS.gene99747:intron | 30.0% |
!!! | TGAATTTTGTTGTTGTACAG+TGG | + | chr2.1:34696735-34696754 | None:intergenic | 30.0% |
AAAGATATCACAATGCTCAG+TGG | - | chr2.1:34694860-34694879 | MS.gene99747:intron | 35.0% | |
AAGGAATCACTTGTTTCCTT+GGG | + | chr2.1:34694327-34694346 | None:intergenic | 35.0% | |
ACAGATTTCATGTGGGAATT+TGG | - | chr2.1:34695151-34695170 | MS.gene99747:intron | 35.0% | |
ACATTGAATGGGATGTTCTA+AGG | + | chr2.1:34694058-34694077 | None:intergenic | 35.0% | |
ACCATTGACAGATAGCTTAA+TGG | - | chr2.1:34694521-34694540 | MS.gene99747:intron | 35.0% | |
ACCATTTGCATCACTTTGAA+CGG | + | chr2.1:34693470-34693489 | None:intergenic | 35.0% | |
ACGTTCAAGAATTTGTGTCA+CGG | - | chr2.1:34697499-34697518 | MS.gene99747:CDS | 35.0% | |
AGAAGCAGATATTTGTATGC+CGG | - | chr2.1:34693606-34693625 | MS.gene99747:CDS | 35.0% | |
AGCTTCAACTTTGTTCTGAT+CGG | + | chr2.1:34694568-34694587 | None:intergenic | 35.0% | |
ATAGAGAGAGAGAGAGAAAA+AGG | + | chr2.1:34697282-34697301 | None:intergenic | 35.0% | |
ATATCGGATACAGATGTAGA+AGG | + | chr2.1:34693526-34693545 | None:intergenic | 35.0% | |
ATATGGAAAATCCTCCACAA+GGG | + | chr2.1:34696456-34696475 | None:intergenic | 35.0% | |
ATCAAGTCCATATCTGATCT+TGG | - | chr2.1:34695048-34695067 | MS.gene99747:intron | 35.0% | |
ATCACAGGTTAGCAAATACT+TGG | + | chr2.1:34695187-34695206 | None:intergenic | 35.0% | |
ATGTCTACAAGACAAGATGT+AGG | + | chr2.1:34694639-34694658 | None:intergenic | 35.0% | |
CAAAGTTATAGAATCAGTCC+AGG | - | chr2.1:34697578-34697597 | MS.gene99747:CDS | 35.0% | |
CAAATATCTGCTTCTACACA+TGG | + | chr2.1:34693601-34693620 | None:intergenic | 35.0% | |
CAAGTAATCCATTCACATCA+AGG | + | chr2.1:34694926-34694945 | None:intergenic | 35.0% | |
CAGACAAATCATGAACTTCT+AGG | + | chr2.1:34694386-34694405 | None:intergenic | 35.0% | |
CATGCTGAGGTTACAATAAA+TGG | - | chr2.1:34694828-34694847 | MS.gene99747:intron | 35.0% | |
CATGTGAATCATCATTGTGA+TGG | + | chr2.1:34694488-34694507 | None:intergenic | 35.0% | |
CATTGAATGGGATGTTCTAA+GGG | + | chr2.1:34694057-34694076 | None:intergenic | 35.0% | |
CGAGTCAAACACATTATTAG+TGG | - | chr2.1:34696855-34696874 | MS.gene99747:CDS | 35.0% | |
CGTAATCAAACATCTTATGG+GGG | - | chr2.1:34695350-34695369 | MS.gene99747:intron | 35.0% | |
CTACGATGAGTGATTATTAG+AGG | - | chr2.1:34695730-34695749 | MS.gene99747:CDS | 35.0% | |
CTATCAAGAATATGTATGGG+GGG | - | chr2.1:34695867-34695886 | MS.gene99747:intron | 35.0% | |
CTCATTAATGCATCAGTAGA+CGG | + | chr2.1:34694081-34694100 | None:intergenic | 35.0% | |
CTCCAAATAACTGAAAACCA+TGG | + | chr2.1:34695772-34695791 | None:intergenic | 35.0% | |
GAGAGAAAGTTGTCAAAAAG+TGG | + | chr2.1:34697226-34697245 | None:intergenic | 35.0% | |
GAGAGTGATATCAAAGACAA+AGG | - | chr2.1:34694192-34694211 | MS.gene99747:CDS | 35.0% | |
GATTCACATGAAGTTTCTGA+TGG | - | chr2.1:34694498-34694517 | MS.gene99747:intron | 35.0% | |
GCATCTGAAAACAATTCCAT+TGG | + | chr2.1:34697003-34697022 | None:intergenic | 35.0% | |
GGAAAACAAAATGAGCTTAC+AGG | + | chr2.1:34696910-34696929 | None:intergenic | 35.0% | |
GGAATGCTGAGAAAAATTAG+AGG | - | chr2.1:34696235-34696254 | MS.gene99747:CDS | 35.0% | |
GGAGTGATATCCAAGAAAAA+GGG | - | chr2.1:34693686-34693705 | MS.gene99747:intron | 35.0% | |
GGATATTGGAAAATCTTGTG+TGG | + | chr2.1:34695893-34695912 | None:intergenic | 35.0% | |
GGTTGTTGTATAGTCCTATT+TGG | - | chr2.1:34696072-34696091 | MS.gene99747:intron | 35.0% | |
GTTGAAGAGCTAGAAAAGAT+AGG | - | chr2.1:34695821-34695840 | MS.gene99747:intron | 35.0% | |
TAATGCAGTTCTGTGGATAT+TGG | + | chr2.1:34695907-34695926 | None:intergenic | 35.0% | |
TAGAAGGAGAAAAGGTAACA+TGG | - | chr2.1:34695004-34695023 | MS.gene99747:intron | 35.0% | |
TATCCACAGAACTGCATTAT+AGG | - | chr2.1:34695908-34695927 | MS.gene99747:CDS | 35.0% | |
TATCTGCTTCTACACAAGAT+TGG | + | chr2.1:34693597-34693616 | None:intergenic | 35.0% | |
TCCATTAAGCTATCTGTCAA+TGG | + | chr2.1:34694525-34694544 | None:intergenic | 35.0% | |
TCTGTTAAAGAATCAGGATG+AGG | - | chr2.1:34693852-34693871 | MS.gene99747:intron | 35.0% | |
TGAAGAGCTAGAAAAGATAG+GGG | - | chr2.1:34695823-34695842 | MS.gene99747:intron | 35.0% | |
TGCTTTGACAGATTTCATGT+GGG | - | chr2.1:34695144-34695163 | MS.gene99747:intron | 35.0% | |
TGTAGAAACAAATGCTAGAC+AGG | - | chr2.1:34694800-34694819 | MS.gene99747:intron | 35.0% | |
TTACGCGAAAATAAAGAGGA+GGG | - | chr2.1:34694129-34694148 | MS.gene99747:intron | 35.0% | |
TTGCTTTGACAGATTTCATG+TGG | - | chr2.1:34695143-34695162 | MS.gene99747:intron | 35.0% | |
TTTACGATGTAATCATGTGC+TGG | - | chr2.1:34695248-34695267 | MS.gene99747:intron | 35.0% | |
TTTACGCGAAAATAAAGAGG+AGG | - | chr2.1:34694128-34694147 | MS.gene99747:intron | 35.0% | |
TTTGCTTTCTTGTGTTACAC+TGG | - | chr2.1:34696952-34696971 | MS.gene99747:CDS | 35.0% | |
TTTGTGTCACGGAATGAATT+TGG | - | chr2.1:34697510-34697529 | MS.gene99747:CDS | 35.0% | |
! | AAAAACATACACCTTGGTGT+TGG | + | chr2.1:34695993-34696012 | None:intergenic | 35.0% |
! | ATCAACCAGAACCAGATTTT+TGG | - | chr2.1:34694979-34694998 | MS.gene99747:intron | 35.0% |
! | CAATCAAGCCTTATCCAATT+AGG | + | chr2.1:34696332-34696351 | None:intergenic | 35.0% |
! | CATGGTTTTCAGTTATTTGG+AGG | - | chr2.1:34695770-34695789 | MS.gene99747:intron | 35.0% |
! | CCTAGAAGTTCATGATTTGT+CGG | - | chr2.1:34693876-34693895 | MS.gene99747:intron | 35.0% |
! | CTAATAATGTGTTTGACTCG+TGG | + | chr2.1:34696855-34696874 | None:intergenic | 35.0% |
! | CTAGAAGTTCATGATTTGTC+GGG | - | chr2.1:34693877-34693896 | MS.gene99747:intron | 35.0% |
! | GGATCAAAAAGACTTTTCCA+TGG | - | chr2.1:34695752-34695771 | MS.gene99747:intron | 35.0% |
! | TCAACCAGAACCAGATTTTT+GGG | - | chr2.1:34694980-34694999 | MS.gene99747:intron | 35.0% |
! | TCTCTCTCTCTCTATTGTTT+TGG | - | chr2.1:34697287-34697306 | MS.gene99747:CDS | 35.0% |
! | TCTGATGATGAATAATGACG+AGG | - | chr2.1:34694359-34694378 | MS.gene99747:intron | 35.0% |
!! | CTAGCATTTGTTTCTACAAG+TGG | + | chr2.1:34694798-34694817 | None:intergenic | 35.0% |
!! | TCTGGTTGATAATATCCGTT+AGG | + | chr2.1:34694969-34694988 | None:intergenic | 35.0% |
!!! | AACCAGATTTTTGGGTTAGA+AGG | - | chr2.1:34694988-34695007 | MS.gene99747:intron | 35.0% |
!!! | CTCTATTGTTTTGGACCAAT+AGG | - | chr2.1:34697296-34697315 | MS.gene99747:CDS | 35.0% |
!!! | TTTTGGGTTAGAAGGAGAAA+AGG | - | chr2.1:34694996-34695015 | MS.gene99747:intron | 35.0% |
AACGATATCACAATGCTCAG+TGG | - | chr2.1:34694734-34694753 | MS.gene99747:intron | 40.0% | |
AAGACCAGCAAATCCATCAT+GGG | - | chr2.1:34697545-34697564 | MS.gene99747:CDS | 40.0% | |
AATCATCATTGTGATGGTCC+TGG | + | chr2.1:34694482-34694501 | None:intergenic | 40.0% | |
ACCGTTCAAAGTGATGCAAA+TGG | - | chr2.1:34693466-34693485 | MS.gene99747:CDS | 40.0% | |
ACTACCTAATGACGAGTCTT+TGG | + | chr2.1:34697065-34697084 | None:intergenic | 40.0% | |
AGACCAATGCTATTAAGGGT+GGG | + | chr2.1:34696383-34696402 | None:intergenic | 40.0% | |
AGGAATCACTTGTTTCCTTG+GGG | + | chr2.1:34694326-34694345 | None:intergenic | 40.0% | |
ATAGTCCAACTTGGAGATAG+TGG | - | chr2.1:34696039-34696058 | MS.gene99747:intron | 40.0% | |
ATATCTGCTTCTACACATGG+TGG | + | chr2.1:34694105-34694124 | None:intergenic | 40.0% | |
ATATTCAAGAGCCAACACCA+AGG | - | chr2.1:34695979-34695998 | MS.gene99747:intron | 40.0% | |
ATCAGTAGACGGACATTGAA+TGG | + | chr2.1:34694070-34694089 | None:intergenic | 40.0% | |
CAAAGTGATGCAAATGGTTG+TGG | - | chr2.1:34693472-34693491 | MS.gene99747:CDS | 40.0% | |
CAAAGTTGAAGCTGAGGAAA+TGG | - | chr2.1:34694575-34694594 | MS.gene99747:intron | 40.0% | |
CAAGGAATCACTTGTTTCCT+TGG | + | chr2.1:34694328-34694347 | None:intergenic | 40.0% | |
CCGACAAATCATGAACTTCT+AGG | + | chr2.1:34693879-34693898 | None:intergenic | 40.0% | |
CCTATTTGGAGAGTTAAGAG+AGG | - | chr2.1:34696086-34696105 | MS.gene99747:CDS | 40.0% | |
CCTCTCTTAACTCTCCAAAT+AGG | + | chr2.1:34696089-34696108 | None:intergenic | 40.0% | |
CTCCTTCTAACCCAAAAATC+TGG | + | chr2.1:34694993-34695012 | None:intergenic | 40.0% | |
CTGAAAACAATTCCATTGGG+AGG | + | chr2.1:34696999-34697018 | None:intergenic | 40.0% | |
CTTCTCATCCTTGATGTGAA+TGG | - | chr2.1:34694915-34694934 | MS.gene99747:intron | 40.0% | |
GAAAAGGAGCAGAATATCCT+CGG | - | chr2.1:34693637-34693656 | MS.gene99747:intron | 40.0% | |
GAGCACAAGGAATGTAAGTT+TGG | - | chr2.1:34696182-34696201 | MS.gene99747:CDS | 40.0% | |
GATATGGAAAATCCTCCACA+AGG | + | chr2.1:34696457-34696476 | None:intergenic | 40.0% | |
GCAGAGACCAATGCTATTAA+GGG | + | chr2.1:34696387-34696406 | None:intergenic | 40.0% | |
GCTGAGGTTACAATAAATGG+TGG | - | chr2.1:34694831-34694850 | MS.gene99747:intron | 40.0% | |
GGACTTGATATGAGAGAACT+TGG | + | chr2.1:34695037-34695056 | None:intergenic | 40.0% | |
GGGAGTGATATCCAAGAAAA+AGG | - | chr2.1:34693685-34693704 | MS.gene99747:intron | 40.0% | |
TAACAGACTCCCAATCTTCA+CGG | + | chr2.1:34693839-34693858 | None:intergenic | 40.0% | |
TAAGACCAGCAAATCCATCA+TGG | - | chr2.1:34697544-34697563 | MS.gene99747:CDS | 40.0% | |
TACACCAAAGACTCGTCATT+AGG | - | chr2.1:34697058-34697077 | MS.gene99747:CDS | 40.0% | |
TACGCGAAAATAAAGAGGAG+GGG | - | chr2.1:34694130-34694149 | MS.gene99747:intron | 40.0% | |
TAGTCCAACTTGGAGATAGT+GGG | - | chr2.1:34696040-34696059 | MS.gene99747:intron | 40.0% | |
TATCTGCTTCTACACATGGT+GGG | + | chr2.1:34694104-34694123 | None:intergenic | 40.0% | |
TCAGAACAAAGTTGAAGCTG+AGG | - | chr2.1:34694569-34694588 | MS.gene99747:intron | 40.0% | |
TCAGTAGACGGACATTGAAT+GGG | + | chr2.1:34694069-34694088 | None:intergenic | 40.0% | |
TCTGCTCGAGTATAAAGAGA+AGG | - | chr2.1:34696160-34696179 | MS.gene99747:CDS | 40.0% | |
TGACCTATAATGCAGTTCTG+TGG | + | chr2.1:34695914-34695933 | None:intergenic | 40.0% | |
TGCAGAGACCAATGCTATTA+AGG | + | chr2.1:34696388-34696407 | None:intergenic | 40.0% | |
TGGGAGTCTGTTAAAGAATC+AGG | - | chr2.1:34693846-34693865 | MS.gene99747:intron | 40.0% | |
TGTGTCAGTGATGTTCCTAA+CGG | - | chr2.1:34694951-34694970 | MS.gene99747:intron | 40.0% | |
TTATCCCACTATCTCCAAGT+TGG | + | chr2.1:34696047-34696066 | None:intergenic | 40.0% | |
TTCTTGATGCTTGTGTGTAC+TGG | - | chr2.1:34695309-34695328 | MS.gene99747:intron | 40.0% | |
TTGAGATAGTAACCCCATGA+TGG | + | chr2.1:34697561-34697580 | None:intergenic | 40.0% | |
! | AAGCCTTATCCAATTAGGTG+TGG | + | chr2.1:34696327-34696346 | None:intergenic | 40.0% |
! | ACAAAGCACCCTTAGCTAAA+AGG | - | chr2.1:34696211-34696230 | MS.gene99747:CDS | 40.0% |
! | CTAACCCAAAAATCTGGTTC+TGG | + | chr2.1:34694987-34695006 | None:intergenic | 40.0% |
! | GTATAAAGAGAAGGAGCACA+AGG | - | chr2.1:34696169-34696188 | MS.gene99747:CDS | 40.0% |
! | TGCAGTTACTCCCTTTTTCT+TGG | + | chr2.1:34693699-34693718 | None:intergenic | 40.0% |
! | TTACCTAGAAAGGTTGGCTA+TGG | - | chr2.1:34697470-34697489 | MS.gene99747:CDS | 40.0% |
!! | AACTTGGAGATAGTGGGATA+AGG | - | chr2.1:34696046-34696065 | MS.gene99747:intron | 40.0% |
!! | ACCACCATTTCTAGTAACCT+CGG | + | chr2.1:34694709-34694728 | None:intergenic | 40.0% |
!! | AGCATTCCACCTTTTAGCTA+AGG | + | chr2.1:34696223-34696242 | None:intergenic | 40.0% |
!! | ATTTCTTCAAGTGGTGTCAC+TGG | + | chr2.1:34694663-34694682 | None:intergenic | 40.0% |
!! | GATGGATTTGCTGGTCTTAT+GGG | + | chr2.1:34697543-34697562 | None:intergenic | 40.0% |
!! | GCATTCCACCTTTTAGCTAA+GGG | + | chr2.1:34696222-34696241 | None:intergenic | 40.0% |
!! | TGATGGATTTGCTGGTCTTA+TGG | + | chr2.1:34697544-34697563 | None:intergenic | 40.0% |
!!! | ATCCAGACTGGTCTTTTGTT+GGG | - | chr2.1:34695380-34695399 | MS.gene99747:intron | 40.0% |
AAGCACCCTTAGCTAAAAGG+TGG | - | chr2.1:34696214-34696233 | MS.gene99747:CDS | 45.0% | |
AGACCAGCAAATCCATCATG+GGG | - | chr2.1:34697546-34697565 | MS.gene99747:CDS | 45.0% | |
AGAGAAGCCTCTTGTGTTGA+AGG | - | chr2.1:34696771-34696790 | MS.gene99747:CDS | 45.0% | |
AGGACCTAAAGGTGATCTTC+GGG | - | chr2.1:34697446-34697465 | MS.gene99747:CDS | 45.0% | |
ATCACTTGTTTCCTTGGGGT+TGG | + | chr2.1:34694322-34694341 | None:intergenic | 45.0% | |
ATCACTTTGAACGGTACGTC+TGG | + | chr2.1:34693461-34693480 | None:intergenic | 45.0% | |
ATCTGTATCCGATATGCCTC+CGG | - | chr2.1:34693531-34693550 | MS.gene99747:CDS | 45.0% | |
ATCTTCGGGGTTACCTAGAA+AGG | - | chr2.1:34697460-34697479 | MS.gene99747:CDS | 45.0% | |
ATGTAGCCACCACACCTAAT+TGG | - | chr2.1:34696315-34696334 | MS.gene99747:CDS | 45.0% | |
ATTCACAAGCGCCTTGTAAG+GGG | + | chr2.1:34696887-34696906 | None:intergenic | 45.0% | |
CAAGCTGCAGAAAAGGACAA+CGG | - | chr2.1:34693661-34693680 | MS.gene99747:intron | 45.0% | |
CAGGACCTAAAGGTGATCTT+CGG | - | chr2.1:34697445-34697464 | MS.gene99747:CDS | 45.0% | |
CATCCCACCCTTAATAGCAT+TGG | - | chr2.1:34696377-34696396 | MS.gene99747:CDS | 45.0% | |
CATGCCGAGGTTACTAGAAA+TGG | - | chr2.1:34694702-34694721 | MS.gene99747:intron | 45.0% | |
CCACCACACCTAATTGGATA+AGG | - | chr2.1:34696321-34696340 | MS.gene99747:CDS | 45.0% | |
CCTTATCCAATTAGGTGTGG+TGG | + | chr2.1:34696324-34696343 | None:intergenic | 45.0% | |
CTCAGTCAGTCTGCAGAAAA+GGG | - | chr2.1:34694162-34694181 | MS.gene99747:intron | 45.0% | |
CTCTTCAACCAAACCTCTCT+TGG | + | chr2.1:34695810-34695829 | None:intergenic | 45.0% | |
CTGAGTTCCTTCAACACAAG+AGG | + | chr2.1:34696781-34696800 | None:intergenic | 45.0% | |
GAAAGTGATGCCAATGGTTG+TGG | - | chr2.1:34693979-34693998 | MS.gene99747:intron | 45.0% | |
GAAGGAACTCAGAAAGCTGT+GGG | - | chr2.1:34696789-34696808 | MS.gene99747:CDS | 45.0% | |
GAGACCAATGCTATTAAGGG+TGG | + | chr2.1:34696384-34696403 | None:intergenic | 45.0% | |
GATTCACAAGCGCCTTGTAA+GGG | + | chr2.1:34696888-34696907 | None:intergenic | 45.0% | |
GTAGTCGAAAGTGATGCCAA+TGG | - | chr2.1:34693973-34693992 | MS.gene99747:intron | 45.0% | |
GTCTTCCTTCCTCTTCTCTT+TGG | + | chr2.1:34693439-34693458 | None:intergenic | 45.0% | |
TAACCCCGAAGATCACCTTT+AGG | + | chr2.1:34697453-34697472 | None:intergenic | 45.0% | |
TACCCAACAAAAGACCAGTC+TGG | + | chr2.1:34695385-34695404 | None:intergenic | 45.0% | |
TAGACAGGTAGATCATGCTG+AGG | - | chr2.1:34694815-34694834 | MS.gene99747:intron | 45.0% | |
TATCAAGGAACCACCTATCC+AGG | - | chr2.1:34694461-34694480 | MS.gene99747:intron | 45.0% | |
TATGCCGGCGAATGAAGAAA+AGG | - | chr2.1:34693621-34693640 | MS.gene99747:CDS | 45.0% | |
TCATTGTGATGGTCCTGGAT+AGG | + | chr2.1:34694477-34694496 | None:intergenic | 45.0% | |
TCGCATTGAATGGGATGTTC+CGG | + | chr2.1:34693553-34693572 | None:intergenic | 45.0% | |
TGAAGGAACTCAGAAAGCTG+TGG | - | chr2.1:34696788-34696807 | MS.gene99747:CDS | 45.0% | |
TTGGCTCATTAACGCATGAG+TGG | + | chr2.1:34693578-34693597 | None:intergenic | 45.0% | |
! | AGACAAGCCTCAGAAGCATA+TGG | - | chr2.1:34696135-34696154 | MS.gene99747:CDS | 45.0% |
! | AGTCTTTGGTGTAGTGGTAG+CGG | + | chr2.1:34697051-34697070 | None:intergenic | 45.0% |
! | ATAGAGTGCCAAGAGAGGTT+TGG | - | chr2.1:34695799-34695818 | MS.gene99747:intron | 45.0% |
! | ATGACGAGTCTTTGGTGTAG+TGG | + | chr2.1:34697057-34697076 | None:intergenic | 45.0% |
! | ATGAGTGGACTCGCATTGAA+TGG | + | chr2.1:34693563-34693582 | None:intergenic | 45.0% |
! | GTATGATAGAGTGCCAAGAG+AGG | - | chr2.1:34695794-34695813 | MS.gene99747:intron | 45.0% |
! | TGAGTGGACTCGCATTGAAT+GGG | + | chr2.1:34693562-34693581 | None:intergenic | 45.0% |
! | TGCCTTTTGCAGTGTACAAG+AGG | - | chr2.1:34695094-34695113 | MS.gene99747:intron | 45.0% |
! | TGCTCCTTTTCTTCATTCGC+CGG | + | chr2.1:34693628-34693647 | None:intergenic | 45.0% |
! | TTGTACACTGCAAAAGGCAC+AGG | + | chr2.1:34695093-34695112 | None:intergenic | 45.0% |
!! | CTGAGGGTGTATCATTTTCC+TGG | + | chr2.1:34697599-34697618 | None:intergenic | 45.0% |
!! | TAACCCCATGATGGATTTGC+TGG | + | chr2.1:34697552-34697571 | None:intergenic | 45.0% |
!! | TAGTGGTAGCGGTAAGAGTA+GGG | + | chr2.1:34697040-34697059 | None:intergenic | 45.0% |
!!! | ACACTGGTTTTCCTCCTATG+TGG | - | chr2.1:34696968-34696987 | MS.gene99747:CDS | 45.0% |
!!! | CATCCAGACTGGTCTTTTGT+TGG | - | chr2.1:34695379-34695398 | MS.gene99747:intron | 45.0% |
!! | AACATATTATATATATATTT+GGG | - | chr2.1:34695609-34695628 | MS.gene99747:intron | 5.0% |
!! | TAACATATTATATATATATT+TGG | - | chr2.1:34695608-34695627 | MS.gene99747:intron | 5.0% |
ACCGGTGATTCCGTGAAGAT+TGG | - | chr2.1:34693826-34693845 | MS.gene99747:intron | 50.0% | |
AGCAAAAGGTAAGGTGCGTG+AGG | + | chr2.1:34697107-34697126 | None:intergenic | 50.0% | |
AGTGGATGACTCCCCTTACA+AGG | - | chr2.1:34696873-34696892 | MS.gene99747:CDS | 50.0% | |
AGTTCCAACCCTGACGAAAC+CGG | - | chr2.1:34693808-34693827 | MS.gene99747:intron | 50.0% | |
ATACACCCTCAGCACCAGAT+GGG | - | chr2.1:34697607-34697626 | MS.gene99747:CDS | 50.0% | |
ATTGGGAGGAGTGACCACAT+AGG | + | chr2.1:34696985-34697004 | None:intergenic | 50.0% | |
CACGGAATGAATTTGGCCAG+CGG | - | chr2.1:34697517-34697536 | MS.gene99747:CDS | 50.0% | |
CAGCCATAGCCAACCTTTCT+AGG | + | chr2.1:34697476-34697495 | None:intergenic | 50.0% | |
CAGTCTGCAGAAAAGGGCAA+TGG | - | chr2.1:34694168-34694187 | MS.gene99747:intron | 50.0% | |
CATTGAATGGGATGTTCCGG+AGG | + | chr2.1:34693550-34693569 | None:intergenic | 50.0% | |
CCCAATCTTCACGGAATCAC+CGG | + | chr2.1:34693830-34693849 | None:intergenic | 50.0% | |
CCGGTGATTCCGTGAAGATT+GGG | - | chr2.1:34693827-34693846 | MS.gene99747:intron | 50.0% | |
CCTCAGTCAGTCTGCAGAAA+AGG | - | chr2.1:34694161-34694180 | MS.gene99747:intron | 50.0% | |
CTGCAGAAAAGGACAACGGA+GGG | - | chr2.1:34693665-34693684 | MS.gene99747:intron | 50.0% | |
GACTTGCATGTCTTCCCTTG+TGG | - | chr2.1:34696439-34696458 | MS.gene99747:CDS | 50.0% | |
GCAGAAGCCATATGCTTCTG+AGG | + | chr2.1:34696145-34696164 | None:intergenic | 50.0% | |
GCCGAGGTTACTAGAAATGG+TGG | - | chr2.1:34694705-34694724 | MS.gene99747:intron | 50.0% | |
GCGGTAAGAGTAGGGGAATA+TGG | + | chr2.1:34697032-34697051 | None:intergenic | 50.0% | |
GGAAGACATGCAAGTCAGCT+TGG | + | chr2.1:34696435-34696454 | None:intergenic | 50.0% | |
GGACCTAAAGGTGATCTTCG+GGG | - | chr2.1:34697447-34697466 | MS.gene99747:CDS | 50.0% | |
GGATTCACAAGCGCCTTGTA+AGG | + | chr2.1:34696889-34696908 | None:intergenic | 50.0% | |
GGCCTCTTGTACACTGCAAA+AGG | + | chr2.1:34695099-34695118 | None:intergenic | 50.0% | |
GTTTCTACAAGTGGCGTCAC+TGG | + | chr2.1:34694789-34694808 | None:intergenic | 50.0% | |
TAGTCAGGTAGATCATGCCG+AGG | - | chr2.1:34694689-34694708 | MS.gene99747:intron | 50.0% | |
TATGTGGTCACTCCTCCCAA+TGG | - | chr2.1:34696984-34697003 | MS.gene99747:CDS | 50.0% | |
TCGGGGTTACCTAGAAAGGT+TGG | - | chr2.1:34697464-34697483 | MS.gene99747:CDS | 50.0% | |
TGGGACCAAAGAGAAGAGGA+AGG | - | chr2.1:34693431-34693450 | MS.gene99747:CDS | 50.0% | |
TTGCATGTCTTCCCTTGTGG+AGG | - | chr2.1:34696442-34696461 | MS.gene99747:CDS | 50.0% | |
TTGTGATGGTCCTGGATAGG+TGG | + | chr2.1:34694474-34694493 | None:intergenic | 50.0% | |
! | CCTTTTCTGCAGACTGACTG+AGG | + | chr2.1:34694164-34694183 | None:intergenic | 50.0% |
! | TGATGCTTGTGTGTACTGGC+AGG | - | chr2.1:34695313-34695332 | MS.gene99747:intron | 50.0% |
!! | AGTGGTAGCGGTAAGAGTAG+GGG | + | chr2.1:34697039-34697058 | None:intergenic | 50.0% |
!! | GGAGATAGTGGGATAAGGCT+TGG | - | chr2.1:34696051-34696070 | MS.gene99747:intron | 50.0% |
!! | GTAGTGGTAGCGGTAAGAGT+AGG | + | chr2.1:34697041-34697060 | None:intergenic | 50.0% |
CAGAAAGCTGTGGGAGATGC+TGG | - | chr2.1:34696798-34696817 | MS.gene99747:CDS | 55.0% | |
CCTCGGTCAAGCTGCAGAAA+AGG | - | chr2.1:34693654-34693673 | MS.gene99747:intron | 55.0% | |
GATACACCCTCAGCACCAGA+TGG | - | chr2.1:34697606-34697625 | MS.gene99747:CDS | 55.0% | |
GCTGCAGAAAAGGACAACGG+AGG | - | chr2.1:34693664-34693683 | MS.gene99747:intron | 55.0% | |
GGGGGAATCTACATCCAGAC+TGG | - | chr2.1:34695368-34695387 | MS.gene99747:intron | 55.0% | |
TACACCCTCAGCACCAGATG+GGG | - | chr2.1:34697608-34697627 | MS.gene99747:CDS | 55.0% | |
TGAGAACGGTTCCAACCCCA+AGG | - | chr2.1:34694308-34694327 | MS.gene99747:CDS | 55.0% | |
TGGAACTCTCCCTTCTCCCA+CGG | + | chr2.1:34696835-34696854 | None:intergenic | 55.0% | |
! | AAGCAGTTTGCTCCCCCATC+TGG | + | chr2.1:34697624-34697643 | None:intergenic | 55.0% |
! | CCTTTTCTGCAGCTTGACCG+AGG | + | chr2.1:34693657-34693676 | None:intergenic | 55.0% |
! | GGGATGTTCCGGAGGCATAT+CGG | + | chr2.1:34693542-34693561 | None:intergenic | 55.0% |
!! | ACGGAATCACCGGTTTCGTC+AGG | + | chr2.1:34693820-34693839 | None:intergenic | 55.0% |
!! | ATCACCGGTTTCGTCAGGGT+TGG | + | chr2.1:34693815-34693834 | None:intergenic | 55.0% |
!! | CGGAATCACCGGTTTCGTCA+GGG | + | chr2.1:34693819-34693838 | None:intergenic | 55.0% |
!! | CTCTGGAGTGCCACAACCAT+TGG | + | chr2.1:34693992-34694011 | None:intergenic | 55.0% |
ACACCCTCAGCACCAGATGG+GGG | - | chr2.1:34697609-34697628 | MS.gene99747:CDS | 60.0% | |
CTGTGGGAGATGCTGGAACC+TGG | - | chr2.1:34696805-34696824 | MS.gene99747:CDS | 60.0% | |
GGGAGGAGTGACCACATAGG+AGG | + | chr2.1:34696982-34697001 | None:intergenic | 60.0% | |
! | ACCTGGTCTTCCGTGGGAGA+AGG | - | chr2.1:34696822-34696841 | MS.gene99747:CDS | 60.0% |
! | CCTGGTCTTCCGTGGGAGAA+GGG | - | chr2.1:34696823-34696842 | MS.gene99747:CDS | 60.0% |
! | GCTGGAACCTGGTCTTCCGT+GGG | - | chr2.1:34696816-34696835 | MS.gene99747:CDS | 60.0% |
! | TGCTGGAACCTGGTCTTCCG+TGG | - | chr2.1:34696815-34696834 | MS.gene99747:CDS | 60.0% |
!! | TTGCTGGTCTTATGGGCCGC+TGG | + | chr2.1:34697536-34697555 | None:intergenic | 60.0% |
CCCTTCTCCCACGGAAGACC+AGG | + | chr2.1:34696826-34696845 | None:intergenic | 65.0% | |
! | GCTCCCCCATCTGGTGCTGA+GGG | + | chr2.1:34697615-34697634 | None:intergenic | 65.0% |
! | TGCTCCCCCATCTGGTGCTG+AGG | + | chr2.1:34697616-34697635 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 34693430 | 34697662 | 34693430 | ID=MS.gene99747 |
chr2.1 | mRNA | 34693430 | 34697662 | 34693430 | ID=MS.gene99747.t1;Parent=MS.gene99747 |
chr2.1 | exon | 34696075 | 34697662 | 34696075 | ID=MS.gene99747.t1.exon1;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34696075 | 34697662 | 34696075 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
chr2.1 | exon | 34695905 | 34695986 | 34695905 | ID=MS.gene99747.t1.exon2;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34695905 | 34695986 | 34695905 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
chr2.1 | exon | 34695691 | 34695757 | 34695691 | ID=MS.gene99747.t1.exon3;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34695691 | 34695757 | 34695691 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
chr2.1 | exon | 34694183 | 34694368 | 34694183 | ID=MS.gene99747.t1.exon4;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34694183 | 34694368 | 34694183 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
chr2.1 | exon | 34694013 | 34694073 | 34694013 | ID=MS.gene99747.t1.exon5;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34694013 | 34694073 | 34694013 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
chr2.1 | exon | 34693430 | 34693644 | 34693430 | ID=MS.gene99747.t1.exon6;Parent=MS.gene99747.t1 |
chr2.1 | CDS | 34693430 | 34693644 | 34693430 | ID=cds.MS.gene99747.t1;Parent=MS.gene99747.t1 |
Gene Sequence |
Protein sequence |