AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080047993.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047993.01.T01 MTR_1g081800 86.054 631 34 2 1 577 1 631 0.0 1062
MsG0080047993.01.T01 MTR_7g113520 43.312 314 163 6 60 366 99 404 1.41e-66 230
MsG0080047993.01.T01 MTR_1g082920 43.689 309 159 6 66 366 123 424 3.99e-65 227
MsG0080047993.01.T01 MTR_4g081390 37.464 347 199 7 37 366 382 727 6.80e-61 215
MsG0080047993.01.T01 MTR_4g081390 37.464 347 199 7 37 366 380 725 2.05e-60 214
MsG0080047993.01.T01 MTR_5g031470 38.192 343 177 8 39 366 352 674 4.58e-60 216
MsG0080047993.01.T01 MTR_5g049620 37.901 343 178 8 39 366 327 649 7.90e-60 214
MsG0080047993.01.T01 MTR_5g049820 37.901 343 178 8 39 366 327 649 3.36e-59 213
MsG0080047993.01.T01 MTR_2g082570 36.036 333 195 6 51 366 362 693 9.66e-58 206
MsG0080047993.01.T01 MTR_8g072430 39.759 332 175 10 46 366 832 1149 1.73e-57 209
MsG0080047993.01.T01 MTR_5g025100 41.216 296 162 4 75 366 876 1163 6.52e-56 204
MsG0080047993.01.T01 MTR_2g010760 36.705 346 189 8 36 366 387 717 1.59e-55 201
MsG0080047993.01.T01 MTR_2g069950 38.608 316 172 7 62 366 314 618 4.47e-55 201
MsG0080047993.01.T01 MTR_7g109130 38.961 308 168 7 69 366 159 456 1.49e-51 189
MsG0080047993.01.T01 MTR_7g109130 38.961 308 168 7 69 366 80 377 1.55e-51 188
MsG0080047993.01.T01 MTR_7g112420 38.024 334 181 10 49 366 229 552 1.89e-51 190
MsG0080047993.01.T01 MTR_1g087880 40.391 307 163 8 70 366 378 674 2.06e-51 190
MsG0080047993.01.T01 MTR_4g092140 36.102 313 178 7 73 366 301 610 4.38e-51 186
MsG0080047993.01.T01 MTR_7g109130 38.961 308 171 8 69 366 381 681 7.31e-51 189
MsG0080047993.01.T01 MTR_7g109130 39.088 307 167 7 70 366 382 678 9.63e-51 188
MsG0080047993.01.T01 MTR_5g096570 38.679 318 156 10 70 366 416 715 3.12e-50 187
MsG0080047993.01.T01 MTR_8g098230 40.127 314 145 10 76 366 471 764 1.31e-49 185
MsG0080047993.01.T01 MTR_7g112420 36.905 336 180 10 47 366 357 676 1.75e-49 185
MsG0080047993.01.T01 MTR_8g098230 40.190 316 150 10 76 366 471 772 1.83e-49 185
MsG0080047993.01.T01 MTR_2g082570 34.426 305 182 6 51 338 362 665 6.67e-47 175
MsG0080047993.01.T01 MTR_1g083770 37.500 312 170 10 69 366 391 691 3.90e-46 175
MsG0080047993.01.T01 MTR_3g060900 34.916 358 185 13 32 366 379 711 1.66e-45 173
MsG0080047993.01.T01 MTR_7g091290 33.628 339 196 7 47 366 341 669 1.11e-43 167
MsG0080047993.01.T01 MTR_8g104200 36.755 302 173 7 76 366 503 797 1.92e-42 164
MsG0080047993.01.T01 MTR_7g075060 35.256 312 159 9 85 366 49 347 2.84e-39 154
MsG0080047993.01.T01 MTR_7g091290 33.136 338 158 9 47 366 338 625 7.90e-39 153
MsG0080047993.01.T01 MTR_5g011500 34.185 313 162 9 85 366 54 353 8.89e-39 152
MsG0080047993.01.T01 MTR_1g067630 34.076 314 163 10 84 366 50 350 2.73e-38 151
MsG0080047993.01.T01 MTR_8g471180 34.641 306 174 9 71 369 130 416 1.15e-36 146
MsG0080047993.01.T01 MTR_4g112350 35.570 298 158 9 89 366 124 407 1.28e-36 145
MsG0080047993.01.T01 MTR_7g105030 35.197 304 169 11 88 366 9 309 4.54e-36 144
MsG0080047993.01.T01 MTR_7g105030 35.197 304 169 11 88 366 9 309 4.54e-36 144
MsG0080047993.01.T01 MTR_1g059730 33.766 308 168 10 88 366 13 313 5.76e-36 144
MsG0080047993.01.T01 MTR_1g484960 36.111 252 137 5 128 366 39 279 6.46e-36 144
MsG0080047993.01.T01 MTR_1g017540 34.921 252 140 5 128 366 46 286 3.36e-35 141
MsG0080047993.01.T01 MTR_6g084490 32.595 316 175 8 69 366 458 753 4.45e-35 141
MsG0080047993.01.T01 MTR_3g100270 33.663 303 175 11 84 366 5 301 6.15e-35 141
MsG0080047993.01.T01 MTR_2g096010 33.766 308 163 11 88 366 49 344 6.18e-35 141
MsG0080047993.01.T01 MTR_2g055910 32.609 368 198 16 30 366 1 349 1.09e-34 139
MsG0080047993.01.T01 MTR_4g094882 34.177 316 168 12 88 366 12 324 1.98e-34 139
MsG0080047993.01.T01 MTR_3g102170 33.758 314 166 13 89 366 9 316 2.35e-33 136
MsG0080047993.01.T01 MTR_7g061020 30.945 307 179 6 89 379 26 315 4.36e-33 134
MsG0080047993.01.T01 MTR_2g087840 34.868 304 160 8 88 366 88 378 1.70e-32 134
MsG0080047993.01.T01 MTR_4g071210 34.615 286 169 8 86 366 87 359 1.70e-31 130
MsG0080047993.01.T01 MTR_1g018940 32.907 313 170 12 89 366 9 316 1.73e-31 130
MsG0080047993.01.T01 MTR_4g071210 34.615 286 169 8 86 366 87 359 1.77e-31 130
MsG0080047993.01.T01 MTR_5g066320 33.113 302 169 12 89 366 18 310 5.04e-31 129
MsG0080047993.01.T01 MTR_3g084790 32.673 303 167 7 89 366 99 389 1.05e-30 128
MsG0080047993.01.T01 MTR_3g117330 34.495 287 164 10 88 366 99 369 2.05e-30 127
MsG0080047993.01.T01 MTR_4g087040 32.026 306 172 9 85 366 190 483 3.85e-30 127
MsG0080047993.01.T01 MTR_8g080910 33.333 267 142 6 126 366 89 345 1.17e-29 125
MsG0080047993.01.T01 MTR_7g093720 32.986 288 173 9 86 366 71 345 2.28e-28 121
MsG0080047993.01.T01 MTR_4g123730 32.967 273 153 6 114 366 177 439 1.96e-27 118
MsG0080047993.01.T01 MTR_6g086735 34.553 246 141 5 125 366 162 391 2.87e-27 117
MsG0080047993.01.T01 MTR_6g086735 35.081 248 137 8 125 366 162 391 3.56e-27 116
MsG0080047993.01.T01 MTR_5g094310 29.841 315 169 12 83 366 69 362 7.92e-27 116
MsG0080047993.01.T01 MTR_4g119980 33.721 258 137 9 125 366 253 492 1.87e-26 115
MsG0080047993.01.T01 MTR_2g101990 32.423 293 166 8 89 366 186 461 3.10e-26 114
MsG0080047993.01.T01 MTR_2g436650 32.308 260 140 8 125 366 165 406 7.49e-26 113
MsG0080047993.01.T01 MTR_6g082470 34.426 244 140 6 128 366 77 305 7.68e-26 113
MsG0080047993.01.T01 MTR_2g436650 32.308 260 140 8 125 366 245 486 1.67e-25 112
MsG0080047993.01.T01 MTR_4g124650 33.745 243 141 6 128 366 188 414 4.28e-25 110
MsG0080047993.01.T01 MTR_3g055940 30.872 298 155 11 89 359 76 349 1.20e-24 109
MsG0080047993.01.T01 MTR_3g113110 29.932 294 172 8 89 366 20 295 8.54e-24 107
MsG0080047993.01.T01 MTR_5g021650 29.870 308 177 10 89 379 21 306 3.48e-22 101
MsG0080047993.01.T01 MTR_8g076190 31.008 258 152 7 128 379 68 305 1.75e-21 99.8
MsG0080047993.01.T01 MTR_8g076190 31.429 245 146 6 128 366 68 296 1.90e-21 99.8
MsG0080047993.01.T01 MTR_8g076190 30.159 252 147 6 128 366 68 303 1.51e-20 96.7
MsG0080047993.01.T01 MTR_4g071900 31.048 248 143 6 128 366 71 299 1.60e-20 96.3
MsG0080047993.01.T01 MTR_3g113630 28.514 249 149 8 114 356 134 359 2.69e-18 89.7
MsG0080047993.01.T01 MTR_3g113630 28.514 249 149 8 114 356 134 359 2.86e-18 89.4
MsG0080047993.01.T01 MTR_1g075680 27.124 306 179 10 89 366 59 348 3.17e-15 79.3
MsG0080047993.01.T01 MTR_6g053680 25.862 290 185 10 89 367 6 276 6.89e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080047993.01.T01 AT5G27950 53.048 607 218 9 32 576 23 624 0.0 580
MsG0080047993.01.T01 AT5G27950 50.324 463 163 9 176 576 1 458 1.69e-131 392
MsG0080047993.01.T01 AT1G55550 45.231 325 168 7 46 366 46 364 5.50e-88 291
MsG0080047993.01.T01 AT5G27550 42.140 299 160 5 74 366 118 409 2.39e-60 214
MsG0080047993.01.T01 AT5G27550 42.140 299 160 5 74 366 118 409 2.39e-60 214
MsG0080047993.01.T01 AT2G22610 39.939 328 158 7 57 366 386 692 2.47e-59 214
MsG0080047993.01.T01 AT2G22610 39.939 328 158 7 57 366 386 692 3.34e-59 213
MsG0080047993.01.T01 AT2G22610 39.939 328 158 7 57 366 387 693 3.35e-59 213
MsG0080047993.01.T01 AT4G21270 37.015 335 193 6 49 366 392 725 3.69e-58 208
MsG0080047993.01.T01 AT5G54670 37.730 326 189 6 54 366 302 626 7.48e-58 206
MsG0080047993.01.T01 AT5G54670 37.730 326 189 6 54 366 362 686 1.66e-57 206
MsG0080047993.01.T01 AT5G54670 37.730 326 189 6 54 366 362 686 1.66e-57 206
MsG0080047993.01.T01 AT1G72250 40.446 314 170 5 62 366 465 770 2.25e-57 208
MsG0080047993.01.T01 AT1G72250 40.446 314 170 5 62 366 485 790 2.32e-57 208
MsG0080047993.01.T01 AT1G72250 40.446 314 170 5 62 366 486 791 2.43e-57 208
MsG0080047993.01.T01 AT5G65930 38.226 327 187 6 46 366 845 1162 2.68e-57 208
MsG0080047993.01.T01 AT5G65930 38.226 327 187 6 46 366 844 1161 2.88e-57 208
MsG0080047993.01.T01 AT5G65930 38.226 327 187 6 46 366 851 1168 2.95e-57 208
MsG0080047993.01.T01 AT1G72250 40.446 314 170 5 62 366 474 779 3.04e-57 208
MsG0080047993.01.T01 AT4G05190 39.159 309 170 6 75 366 402 709 5.12e-57 205
MsG0080047993.01.T01 AT4G05190 39.159 309 170 6 75 366 415 722 6.50e-57 204
MsG0080047993.01.T01 AT4G27180 38.037 326 188 6 54 366 353 677 1.36e-56 203
MsG0080047993.01.T01 AT4G27180 38.037 326 188 6 54 366 353 677 1.36e-56 203
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 5.44e-55 198
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 5.44e-55 198
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 1.46e-54 198
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 1.46e-54 198
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 1.49e-54 199
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 2.01e-54 199
MsG0080047993.01.T01 AT1G09170 39.498 319 152 10 69 366 415 713 5.84e-54 198
MsG0080047993.01.T01 AT5G27000 38.415 328 177 9 54 366 357 674 3.47e-51 190
MsG0080047993.01.T01 AT2G47500 38.436 307 169 7 70 366 381 677 1.55e-47 179
MsG0080047993.01.T01 AT2G47500 38.436 307 169 7 70 366 381 677 1.73e-47 179
MsG0080047993.01.T01 AT3G44730 35.224 335 194 8 44 366 335 658 8.41e-47 177
MsG0080047993.01.T01 AT3G44730 35.224 335 194 8 44 366 335 658 8.41e-47 177
MsG0080047993.01.T01 AT3G44730 35.224 335 194 8 44 366 380 703 1.07e-46 177
MsG0080047993.01.T01 AT3G44730 35.224 335 194 8 44 366 380 703 1.07e-46 177
MsG0080047993.01.T01 AT1G63640 38.636 308 168 9 71 366 445 743 2.11e-46 176
MsG0080047993.01.T01 AT1G63640 38.636 308 168 9 71 366 455 753 2.22e-46 176
MsG0080047993.01.T01 AT1G63640 38.636 308 168 9 71 366 455 753 2.23e-46 176
MsG0080047993.01.T01 AT1G63640 38.636 308 168 9 71 366 455 753 2.23e-46 176
MsG0080047993.01.T01 AT3G10310 36.218 312 170 8 70 366 345 642 4.84e-46 174
MsG0080047993.01.T01 AT3G10310 36.218 312 170 8 70 366 345 642 6.18e-46 174
MsG0080047993.01.T01 AT1G63640 37.987 308 163 9 71 366 455 746 1.29e-45 173
MsG0080047993.01.T01 AT1G73860 36.755 302 173 8 76 366 414 708 8.02e-45 171
MsG0080047993.01.T01 AT1G73860 36.755 302 173 8 76 366 497 791 1.35e-44 170
MsG0080047993.01.T01 AT5G41310 34.906 318 148 9 71 366 405 685 1.46e-44 170
MsG0080047993.01.T01 AT1G09170 34.783 322 127 9 69 366 415 677 4.35e-43 166
MsG0080047993.01.T01 AT1G18410 34.783 299 176 6 79 366 480 770 1.48e-42 164
MsG0080047993.01.T01 AT1G18410 34.783 299 176 6 79 366 480 770 1.48e-42 164
MsG0080047993.01.T01 AT1G18410 35.117 299 175 7 79 366 623 913 2.56e-42 164
MsG0080047993.01.T01 AT1G18410 34.448 299 169 6 79 366 470 752 4.58e-42 162
MsG0080047993.01.T01 AT1G18410 34.114 299 170 5 79 366 623 905 1.07e-41 162
MsG0080047993.01.T01 AT3G63480 36.255 251 137 6 128 366 48 287 1.18e-40 154
MsG0080047993.01.T01 AT2G28620 35.179 307 162 10 88 367 50 346 9.37e-40 155
MsG0080047993.01.T01 AT2G28620 35.179 307 162 10 88 367 50 346 9.37e-40 155
MsG0080047993.01.T01 AT2G28620 35.179 307 162 10 88 367 50 346 1.18e-39 155
MsG0080047993.01.T01 AT1G12430 34.286 315 150 10 89 366 71 365 1.96e-39 154
MsG0080047993.01.T01 AT1G12430 34.286 315 150 10 89 366 71 365 2.01e-39 154
MsG0080047993.01.T01 AT5G65460 35.430 302 169 9 71 365 122 404 3.74e-39 154
MsG0080047993.01.T01 AT5G65460 35.430 302 169 9 71 365 122 404 4.51e-39 154
MsG0080047993.01.T01 AT5G65460 35.430 302 169 9 71 365 122 404 4.72e-39 154
MsG0080047993.01.T01 AT5G65460 35.430 302 169 9 71 365 122 404 4.99e-39 154
MsG0080047993.01.T01 AT3G63480 35.686 255 137 7 128 366 48 291 1.56e-38 148
MsG0080047993.01.T01 AT1G59540 37.705 244 134 5 130 366 46 278 3.28e-38 150
MsG0080047993.01.T01 AT3G45850 33.663 303 170 9 88 366 55 350 2.60e-37 148
MsG0080047993.01.T01 AT3G45850 33.663 303 170 9 88 366 55 350 2.60e-37 148
MsG0080047993.01.T01 AT5G65460 34.628 309 169 10 71 365 122 411 1.02e-36 147
MsG0080047993.01.T01 AT3G54870 35.135 259 134 7 128 366 150 394 2.88e-36 145
MsG0080047993.01.T01 AT3G54870 35.135 259 134 7 128 366 150 394 3.07e-36 145
MsG0080047993.01.T01 AT3G54870 35.135 259 134 7 128 366 150 394 4.53e-36 144
MsG0080047993.01.T01 AT1G01950 33.333 312 165 8 85 366 57 355 7.23e-36 144
MsG0080047993.01.T01 AT1G01950 33.333 312 165 8 85 366 57 355 7.91e-36 144
MsG0080047993.01.T01 AT1G01950 33.333 312 165 8 85 366 57 355 8.39e-36 144
MsG0080047993.01.T01 AT3G10180 34.932 292 161 8 89 366 4 280 1.98e-35 143
MsG0080047993.01.T01 AT1G18550 36.047 258 139 9 115 366 197 434 2.05e-35 142
MsG0080047993.01.T01 AT3G10180 34.932 292 161 8 89 366 4 280 2.12e-35 142
MsG0080047993.01.T01 AT2G36200 33.333 303 176 8 88 366 12 312 3.10e-35 142
MsG0080047993.01.T01 AT2G37420 35.200 250 150 4 128 366 95 343 3.12e-35 142
MsG0080047993.01.T01 AT2G37420 35.200 250 150 4 128 366 95 343 3.12e-35 142
MsG0080047993.01.T01 AT2G36200 33.333 303 176 8 88 366 12 312 4.53e-35 141
MsG0080047993.01.T01 AT5G10470 31.737 334 195 10 39 365 101 408 1.26e-33 137
MsG0080047993.01.T01 AT5G10470 31.737 334 195 10 39 365 101 408 1.28e-33 137
MsG0080047993.01.T01 AT3G50240 32.808 317 165 13 89 366 26 333 2.61e-32 133
MsG0080047993.01.T01 AT3G50240 32.808 317 165 13 89 366 26 333 1.55e-31 130
MsG0080047993.01.T01 AT3G50240 32.808 317 165 13 89 366 26 333 1.57e-31 130
MsG0080047993.01.T01 AT3G19050 31.561 301 174 7 88 366 193 483 4.21e-31 130
MsG0080047993.01.T01 AT5G60930 31.833 311 175 11 89 366 7 313 4.57e-31 129
MsG0080047993.01.T01 AT5G60930 31.833 311 175 11 89 366 7 313 5.43e-31 129
MsG0080047993.01.T01 AT2G21380 34.495 287 168 9 86 366 102 374 5.86e-31 129
MsG0080047993.01.T01 AT2G21380 34.495 287 168 9 86 366 102 374 5.86e-31 129
MsG0080047993.01.T01 AT3G49650 34.959 246 144 4 126 366 64 298 7.46e-31 128
MsG0080047993.01.T01 AT5G60930 31.833 311 175 11 89 366 7 313 7.68e-31 129
MsG0080047993.01.T01 AT3G44050 32.895 304 166 8 88 366 93 383 8.70e-31 129
MsG0080047993.01.T01 AT5G47820 31.329 316 177 11 88 366 11 323 2.28e-30 127
MsG0080047993.01.T01 AT5G47820 31.329 316 177 11 88 366 11 323 2.28e-30 127
MsG0080047993.01.T01 AT4G39050 33.798 287 170 9 86 366 96 368 2.53e-30 127
MsG0080047993.01.T01 AT4G14150 34.470 264 138 6 128 366 126 379 1.50e-29 125
MsG0080047993.01.T01 AT3G17360 32.226 301 172 7 88 366 168 458 4.43e-29 124
MsG0080047993.01.T01 AT3G17360 32.226 301 172 7 88 366 168 458 4.85e-29 123
MsG0080047993.01.T01 AT3G17360 32.226 301 172 7 88 366 168 458 5.49e-29 123
MsG0080047993.01.T01 AT3G12020 33.333 288 172 9 86 366 67 341 1.78e-28 121
MsG0080047993.01.T01 AT3G12020 33.333 288 172 9 86 366 67 341 1.78e-28 121
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.44e-28 121
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.44e-28 121
MsG0080047993.01.T01 AT3G12020 33.333 288 172 9 86 366 67 341 2.56e-28 121
MsG0080047993.01.T01 AT3G12020 33.333 288 172 9 86 366 67 341 2.56e-28 121
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.62e-28 120
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.62e-28 120
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.62e-28 120
MsG0080047993.01.T01 AT5G06670 33.562 292 176 8 81 366 59 338 2.66e-28 120
MsG0080047993.01.T01 AT3G23670 33.712 264 140 6 128 366 131 384 4.51e-28 120
MsG0080047993.01.T01 AT3G23670 33.712 264 140 6 128 366 131 384 7.08e-28 119
MsG0080047993.01.T01 AT5G02370 31.783 258 148 5 128 383 74 305 1.22e-27 117
MsG0080047993.01.T01 AT1G21730 32.759 290 173 9 85 366 72 347 1.32e-27 118
MsG0080047993.01.T01 AT5G06670 32.890 301 175 9 81 366 59 347 7.54e-27 116
MsG0080047993.01.T01 AT5G06670 32.890 301 175 9 81 366 59 347 7.54e-27 116
MsG0080047993.01.T01 AT1G18370 34.836 244 139 6 128 366 78 306 7.75e-27 116
MsG0080047993.01.T01 AT3G16630 31.683 303 165 10 89 366 194 479 6.77e-26 113
MsG0080047993.01.T01 AT3G16630 31.683 303 165 10 89 366 194 479 6.77e-26 113
MsG0080047993.01.T01 AT3G16060 31.058 293 170 8 89 366 170 445 1.28e-25 112
MsG0080047993.01.T01 AT1G01950 34.361 227 113 5 163 366 1 214 3.52e-25 110
MsG0080047993.01.T01 AT1G59540 36.041 197 109 4 176 366 1 186 1.40e-24 108
MsG0080047993.01.T01 AT4G24170 32.414 290 167 9 89 366 7 279 1.16e-23 106
MsG0080047993.01.T01 AT4G24170 32.414 290 167 9 89 366 7 279 1.16e-23 106
MsG0080047993.01.T01 AT3G43210 35.039 254 124 8 128 366 74 301 1.62e-23 105
MsG0080047993.01.T01 AT3G43210 35.039 254 124 8 128 366 74 301 1.62e-23 105
MsG0080047993.01.T01 AT3G43210 35.039 254 124 8 128 366 74 301 1.62e-23 105
MsG0080047993.01.T01 AT3G43210 35.039 254 124 8 128 366 74 301 1.62e-23 105
MsG0080047993.01.T01 AT3G43210 35.039 254 124 8 128 366 74 301 1.62e-23 105
MsG0080047993.01.T01 AT5G66310 31.399 293 170 8 89 366 19 295 1.27e-22 103
MsG0080047993.01.T01 AT5G66310 31.399 293 170 8 89 366 19 295 1.27e-22 103
MsG0080047993.01.T01 AT5G66310 31.399 293 170 8 89 366 19 295 1.27e-22 103
MsG0080047993.01.T01 AT3G50240 34.188 234 115 9 167 366 3 231 8.74e-22 100
MsG0080047993.01.T01 AT3G51150 30.065 306 179 8 89 379 18 303 1.55e-21 99.8
MsG0080047993.01.T01 AT3G51150 30.065 306 179 8 89 379 18 303 1.59e-21 99.8
MsG0080047993.01.T01 AT3G51150 30.065 306 179 8 89 379 18 303 1.59e-21 99.8
MsG0080047993.01.T01 AT3G51150 30.065 306 179 8 89 379 18 303 1.59e-21 99.8
MsG0080047993.01.T01 AT5G42490 30.034 293 172 6 89 367 10 283 1.67e-21 99.8
MsG0080047993.01.T01 AT5G42490 30.034 293 172 6 89 367 10 283 1.72e-21 99.8
MsG0080047993.01.T01 AT3G20150 29.278 263 148 10 118 356 126 374 1.49e-19 93.6
MsG0080047993.01.T01 AT3G20150 29.278 263 148 10 118 356 126 374 1.92e-19 93.2
MsG0080047993.01.T01 AT4G38950 29.070 258 157 6 128 379 60 297 2.12e-19 92.8
MsG0080047993.01.T01 AT4G38950 29.070 258 157 6 128 379 60 297 2.12e-19 92.8
MsG0080047993.01.T01 AT4G38950 29.070 258 157 6 128 379 60 297 2.12e-19 92.8
MsG0080047993.01.T01 AT4G38950 29.070 258 157 6 128 379 60 297 2.12e-19 92.8
MsG0080047993.01.T01 AT4G38950 29.070 258 157 6 128 379 60 297 2.12e-19 92.8
MsG0080047993.01.T01 AT2G21300 28.682 258 158 6 128 379 71 308 5.77e-19 91.7
MsG0080047993.01.T01 AT2G21300 28.682 258 158 6 128 379 71 308 5.77e-19 91.7
MsG0080047993.01.T01 AT2G21300 28.682 258 158 6 128 379 71 308 5.77e-19 91.7
MsG0080047993.01.T01 AT2G21300 28.682 258 158 6 128 379 71 308 5.77e-19 91.7
MsG0080047993.01.T01 AT2G21300 28.682 258 158 6 128 379 71 308 5.77e-19 91.7
MsG0080047993.01.T01 AT4G14330 28.912 294 170 12 89 366 49 319 1.45e-17 87.0
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 3.81e-17 85.9
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 3.97e-17 85.9
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.05e-17 85.9
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.09e-17 85.9
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.41e-17 85.9
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.66e-17 85.5
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.81e-17 85.5
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 4.86e-17 85.5
MsG0080047993.01.T01 AT1G20060 31.780 236 137 6 130 356 165 385 5.02e-17 85.5
MsG0080047993.01.T01 AT1G20060 31.776 214 122 6 130 334 165 363 2.35e-15 80.1

Find 149 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCAACAGACACCTATTTA+TGG 0.157354 contig162end:+31038 None:intergenic
TGGAAACTGGATTGAATTTC+TGG 0.187797 contig162end:+27853 None:intergenic
ATTGCTTCTGAGCAAGAAAT+TGG 0.198491 contig162end:-27908 MsG0080047993.01.T01:CDS
CTTTCTGTATGAATGGTATT+TGG 0.211936 contig162end:+27731 None:intergenic
CAACTTACTTGTTTCGGTTT+TGG 0.226053 contig162end:+29113 None:intergenic
GTTACTAAAATTCCTATATA+AGG 0.265089 contig162end:-27249 MsG0080047993.01.T01:three_prime_UTR
GTTTGTCACGAACCTTTAAA+AGG 0.281883 contig162end:-27339 MsG0080047993.01.T01:three_prime_UTR
GCGTTATGATGAAGTTATTA+TGG 0.282638 contig162end:+31407 None:intergenic
AGGATGTCTAATCTGATCTA+AGG 0.291446 contig162end:-27605 MsG0080047993.01.T01:exon
TACTTTACTTTACCATAAAT+AGG 0.298109 contig162end:-31050 MsG0080047993.01.T01:five_prime_UTR
GTAGACTTCTTAGATGCTTT+AGG 0.304166 contig162end:+27998 None:intergenic
CATAATAATGCCCCTTATAT+AGG 0.308420 contig162end:+27237 None:intergenic
ACAAAAGGAGACGAAGATTA+TGG 0.308802 contig162end:-28206 MsG0080047993.01.T01:CDS
CAGCTGGATCCGAGAGAATT+CGG 0.314670 contig162end:-30440 MsG0080047993.01.T01:CDS
AGAAGCATTGAGTAAGATAT+TGG 0.315650 contig162end:-30660 MsG0080047993.01.T01:CDS
TTGCGAAGTTCAACTGGAAT+TGG 0.324475 contig162end:-27785 MsG0080047993.01.T01:CDS
TGTGATGAAAACTTATTTAG+TGG 0.324986 contig162end:-27380 MsG0080047993.01.T01:three_prime_UTR
ATTTGGAACGTTATTTGTTT+CGG 0.325565 contig162end:+27748 None:intergenic
TTACTAAAATTCCTATATAA+GGG 0.328762 contig162end:-27248 MsG0080047993.01.T01:three_prime_UTR
ATCATATATTGCAAATAAAT+TGG 0.329262 contig162end:+31212 None:intergenic
TTCAGCCACATATAATCTTC+AGG 0.331238 contig162end:-28083 MsG0080047993.01.T01:CDS
ACTGAATTGGAGACACTTCT+TGG 0.340869 contig162end:+27974 None:intergenic
AGTAAGATATTGGATATAAA+AGG 0.344733 contig162end:-30650 MsG0080047993.01.T01:intron
CTTAGATGCTTTAGGAGTTT+CGG 0.345571 contig162end:+28006 None:intergenic
TTCAGTTGATGGGTTGTTAC+CGG 0.346423 contig162end:-30926 MsG0080047993.01.T01:CDS
TCCCTTGTTGTACCACCATC+TGG 0.347281 contig162end:+29329 None:intergenic
CATCCACAACTTACTTGTTT+CGG 0.353786 contig162end:+29107 None:intergenic
TAATGAAGAAGAGAAGATTC+AGG 0.358782 contig162end:-30986 MsG0080047993.01.T01:CDS
ATGATTGAGAACATGGAAAC+TGG 0.367464 contig162end:+27840 None:intergenic
TTTAGGTCAGATTCAGTTGA+TGG 0.370959 contig162end:-30937 MsG0080047993.01.T01:CDS
CACATAAGCAAATTACTATA+AGG 0.373297 contig162end:+27399 None:intergenic
AAGGCCTAACTGCAATGAAT+TGG 0.375177 contig162end:-27711 MsG0080047993.01.T01:CDS
GGAGCTCGAGGAAGACATTA+AGG 0.379240 contig162end:-28185 MsG0080047993.01.T01:CDS
CCTCTTTGAAATCATCTTTG+AGG 0.380046 contig162end:+28032 None:intergenic
TACTTTGCAAATTGAATATG+AGG 0.385674 contig162end:+30842 None:intergenic
TTGCTTCTGAGCAAGAAATT+GGG 0.388664 contig162end:-27907 MsG0080047993.01.T01:CDS
TCAATTTCCACCAATCCCTT+TGG 0.388760 contig162end:+29390 None:intergenic
AAGTTTACATGGGCAGTGTC+AGG 0.399132 contig162end:-29871 MsG0080047993.01.T01:CDS
CATGAATCGAGGCACTGAAT+TGG 0.401194 contig162end:+27961 None:intergenic
GCAGTATTGCGAAGTTCAAC+TGG 0.404062 contig162end:-27791 MsG0080047993.01.T01:CDS
GTGTGATCTACAAGACTGTC+TGG 0.417366 contig162end:+29835 None:intergenic
GATTCCAATTCATTGCAGTT+AGG 0.419509 contig162end:+27707 None:intergenic
CAGTATAATACTTGCCTGTA+AGG 0.420383 contig162end:+28946 None:intergenic
GGGCAGTGTCAGGGATCTGC+TGG 0.424221 contig162end:-29861 MsG0080047993.01.T01:CDS
CTCTCGGATCCAGCTGATAC+AGG 0.426118 contig162end:+30447 None:intergenic
CATGCATATTAACACACCTT+TGG 0.428307 contig162end:+27502 None:intergenic
AGAGGTGTCATGTACCTTAC+AGG 0.432518 contig162end:-28960 MsG0080047993.01.T01:CDS
TCACACCAACCTCTAGCAAA+TGG 0.438128 contig162end:-29818 MsG0080047993.01.T01:CDS
CTTCGTCAAGTGTTAGTCCT+CGG 0.448306 contig162end:+29043 None:intergenic
CCAATCCCTTTGGATCAGTC+TGG 0.452080 contig162end:+29400 None:intergenic
TTTCACTTGTCTTTAACAAA+TGG 0.464210 contig162end:-27528 MsG0080047993.01.T01:three_prime_UTR
GTTAGGCCTTTCTGTATGAA+TGG 0.466307 contig162end:+27724 None:intergenic
GAGAGAATTCGGGTTAAGTT+CGG 0.468912 contig162end:-30429 MsG0080047993.01.T01:CDS
AAAGGGATTGGTGGAAATTG+AGG 0.469531 contig162end:-29388 MsG0080047993.01.T01:CDS
TTCGTCAAGTGTTAGTCCTC+GGG 0.472912 contig162end:+29044 None:intergenic
GAGTATGTTGGAAGTTTACA+TGG 0.477657 contig162end:-29882 MsG0080047993.01.T01:CDS
GGAAGGTGTGCTAGGGATCA+AGG 0.484519 contig162end:+31509 None:intergenic
AATTCTGAACCTGTATCAGC+TGG 0.489459 contig162end:-30456 MsG0080047993.01.T01:CDS
TTGCAGCTTTGAAGAGAAAG+AGG 0.491404 contig162end:-28978 MsG0080047993.01.T01:CDS
CACACCAACCTCTAGCAAAT+GGG 0.493745 contig162end:-29817 MsG0080047993.01.T01:intron
TCCATTGCAGATCTTAGAAT+CGG 0.500552 contig162end:+30216 None:intergenic
GACTGATCCAAAGGGATTGG+TGG 0.501949 contig162end:-29397 MsG0080047993.01.T01:CDS
AGAGAAAAGTGGATGAAAAG+AGG 0.507012 contig162end:-30685 MsG0080047993.01.T01:CDS
GCAGGAATTGAAGAAACAAA+AGG 0.507842 contig162end:-28221 MsG0080047993.01.T01:intron
TTAGGTCAGATTCAGTTGAT+GGG 0.510395 contig162end:-30936 MsG0080047993.01.T01:CDS
TCTTCAGGAAAGTGATGACT+TGG 0.511203 contig162end:-28068 MsG0080047993.01.T01:CDS
GTTTCTAGAGGTTGAAACTA+GGG 0.514776 contig162end:+31329 None:intergenic
AAGTTGTGGATGGTTGATCT+TGG 0.516461 contig162end:-29096 MsG0080047993.01.T01:CDS
AGCTGGATCCGAGAGAATTC+GGG 0.517131 contig162end:-30439 MsG0080047993.01.T01:CDS
TACCATAAATAGGTGTCTGT+TGG 0.519034 contig162end:-31040 MsG0080047993.01.T01:five_prime_UTR
CCAGACTGATCCAAAGGGAT+TGG 0.519067 contig162end:-29400 MsG0080047993.01.T01:CDS
AAAGAGAAAGATTAATAGCT+CGG 0.520587 contig162end:+29019 None:intergenic
AAAAGAAGATGAACCATCCA+TGG 0.524875 contig162end:+29916 None:intergenic
AGTTTCTAGAGGTTGAAACT+AGG 0.525554 contig162end:+31328 None:intergenic
AGACACTGATTGAACAGTAA+AGG 0.526745 contig162end:+31098 None:intergenic
AAGGGATTGGTGGAAATTGA+GGG 0.528438 contig162end:-29387 MsG0080047993.01.T01:CDS
GCTCTTTCGTCAAGCATCCA+TGG 0.528938 contig162end:-29933 MsG0080047993.01.T01:CDS
CAAATACCATTCATACAGAA+AGG 0.535907 contig162end:-27730 MsG0080047993.01.T01:CDS
GAGGTAACCTTTGTACTTCG+AGG 0.536196 contig162end:+27671 None:intergenic
CATTATGTCATCATAGAAGA+AGG 0.539034 contig162end:-27625 MsG0080047993.01.T01:CDS
GGCTTGACTATGTAGTAGCA+TGG 0.541074 contig162end:-27292 MsG0080047993.01.T01:three_prime_UTR
GGTACCCATTTGCTAGAGGT+TGG 0.541109 contig162end:+29813 None:intergenic
TAACCTTGGCTTGCTTCTTG+AGG 0.541399 contig162end:+30369 None:intergenic
CAGTGTCTGTCTTGTGTACG+AGG 0.542840 contig162end:-31083 MsG0080047993.01.T01:five_prime_UTR
ACTTTCCTGAAGATTATATG+TGG 0.545055 contig162end:+28078 None:intergenic
GGATTAGCATATTTAGACGT+GGG 0.546465 contig162end:-29149 MsG0080047993.01.T01:CDS
TGCTTCTGAGCAAGAAATTG+GGG 0.547640 contig162end:-27906 MsG0080047993.01.T01:CDS
AAGTAAAGAGAAGTTTCTAG+AGG 0.550473 contig162end:+31317 None:intergenic
GATGGTACAAATGAGCAGCC+AGG 0.552457 contig162end:-29980 MsG0080047993.01.T01:CDS
TTTCGTCAAGCATCCATGGA+TGG 0.554699 contig162end:-29929 MsG0080047993.01.T01:CDS
AGCCAGATGGTGGTACAACA+AGG 0.555597 contig162end:-29331 MsG0080047993.01.T01:CDS
TGGGTTGTTACCGGTTTCAA+CGG 0.556386 contig162end:-30917 MsG0080047993.01.T01:CDS
GCCGATTCTAAGATCTGCAA+TGG 0.560021 contig162end:-30217 MsG0080047993.01.T01:CDS
TAACTTAATGATTGAGAACA+TGG 0.561666 contig162end:+27833 None:intergenic
AAAAGTGGGAAGGTGTGCTA+GGG 0.566397 contig162end:+31502 None:intergenic
TTGTGGATGGTTGATCTTGG+AGG 0.567166 contig162end:-29093 MsG0080047993.01.T01:CDS
ATGGTACAAATGAGCAGCCA+GGG 0.567960 contig162end:-29979 MsG0080047993.01.T01:CDS
ATCATCTTTGAGGCTAGTAG+AGG 0.569786 contig162end:+28042 None:intergenic
CAACTGTTGCTAGTCGGCAT+AGG 0.575024 contig162end:-27934 MsG0080047993.01.T01:CDS
GCTTACGGTCAAACAGGCAC+AGG 0.575896 contig162end:-30171 MsG0080047993.01.T01:CDS
AGTTTACATGGGCAGTGTCA+GGG 0.576294 contig162end:-29870 MsG0080047993.01.T01:CDS
TCTCAAATTTGAATCTGATG+AGG 0.577664 contig162end:+27652 None:intergenic
AACATCCAGACTGATCCAAA+GGG 0.578684 contig162end:-29405 MsG0080047993.01.T01:CDS
GAACTTAACCCGAATTCTCT+CGG 0.580661 contig162end:+30431 None:intergenic
TGTTAATTACTTGTTTAACA+TGG 0.581626 contig162end:-27450 MsG0080047993.01.T01:three_prime_UTR
CGTAACTCCTCGAAGTACAA+AGG 0.583784 contig162end:-27678 MsG0080047993.01.T01:CDS
CAACATCCAGACTGATCCAA+AGG 0.585583 contig162end:-29406 MsG0080047993.01.T01:CDS
GGATGTCTAATCTGATCTAA+GGG 0.588193 contig162end:-27604 MsG0080047993.01.T01:exon
GACGAAGATTATGGAGCTCG+AGG 0.589607 contig162end:-28197 MsG0080047993.01.T01:CDS
TACTAAAATTCCTATATAAG+GGG 0.590979 contig162end:-27247 MsG0080047993.01.T01:three_prime_UTR
ACGTAAATGAGGCATCAAGC+AGG 0.592309 contig162end:-29278 MsG0080047993.01.T01:CDS
AGTTCACGTTACAAGAATCA+CGG 0.594806 contig162end:-31457 MsG0080047993.01.T01:five_prime_UTR
ATATTGCTAATGTTATCAAG+TGG 0.597002 contig162end:-27567 MsG0080047993.01.T01:three_prime_UTR
AAACCGAAACAAGTAAGTTG+TGG 0.597218 contig162end:-29110 MsG0080047993.01.T01:CDS
GAGGCTGAAGCAGAGAAAAG+TGG 0.597225 contig162end:-30696 MsG0080047993.01.T01:CDS
CAACTGGAATTGGAAAATCT+CGG 0.597644 contig162end:-27775 MsG0080047993.01.T01:CDS
CTTTAACAAATGGTAGCCAA+AGG 0.599038 contig162end:-27518 MsG0080047993.01.T01:three_prime_UTR
TGAGTTCAACTGTTGCTAGT+CGG 0.599110 contig162end:-27940 MsG0080047993.01.T01:CDS
AGAGCACGAGGAATAATCCC+TGG 0.600870 contig162end:+29962 None:intergenic
CGAAACAAGTAAGTTGTGGA+TGG 0.601710 contig162end:-29106 MsG0080047993.01.T01:CDS
AGGCATCAAGCAGGTCACAT+TGG 0.604737 contig162end:-29269 MsG0080047993.01.T01:intron
GGGTTAAGTTCGGAGGAACA+AGG 0.608001 contig162end:-30419 MsG0080047993.01.T01:CDS
ATTTGTTAAAGACAAGTGAA+AGG 0.611887 contig162end:+27530 None:intergenic
CCTCAAAGATGATTTCAAAG+AGG 0.614703 contig162end:-28032 MsG0080047993.01.T01:CDS
TCTTTCTCTTCAAAGCTGCA+AGG 0.617407 contig162end:+28980 None:intergenic
GTCGTGGACTAACGTAAATG+AGG 0.618864 contig162end:-29289 MsG0080047993.01.T01:CDS
TTTCCTCAAGAAGCAAGCCA+AGG 0.619382 contig162end:-30372 MsG0080047993.01.T01:intron
TTTATATATCTAGCTTGACA+AGG 0.624226 contig162end:-29170 MsG0080047993.01.T01:intron
AGAATTCGGGTTAAGTTCGG+AGG 0.625212 contig162end:-30426 MsG0080047993.01.T01:CDS
AAGAGCTCTTCGAGAGCACG+AGG 0.627570 contig162end:+29950 None:intergenic
CTGATTGTGCTAAAGCCAGA+TGG 0.630774 contig162end:-29344 MsG0080047993.01.T01:CDS
GCCAGATGGTGGTACAACAA+GGG 0.630858 contig162end:-29330 MsG0080047993.01.T01:CDS
ATTCTAAGATCTGCAATGGA+CGG 0.633136 contig162end:-30213 MsG0080047993.01.T01:CDS
AGGATTAGCATATTTAGACG+TGG 0.635209 contig162end:-29150 MsG0080047993.01.T01:CDS
AAAAGGTACCCATTTGCTAG+AGG 0.640128 contig162end:+29809 None:intergenic
TTGATCTTGGAGGCAGCGAG+CGG 0.644675 contig162end:-29083 MsG0080047993.01.T01:CDS
CTTCTGAGCAAGAAATTGGG+GGG 0.649402 contig162end:-27904 MsG0080047993.01.T01:CDS
GATTAGCATATTTAGACGTG+GGG 0.654200 contig162end:-29148 MsG0080047993.01.T01:CDS
TGTGATCTACAAGACTGTCT+GGG 0.656124 contig162end:+29836 None:intergenic
AGTATGTTGGAAGTTTACAT+GGG 0.668329 contig162end:-29881 MsG0080047993.01.T01:CDS
GCTTCTGAGCAAGAAATTGG+GGG 0.668679 contig162end:-27905 MsG0080047993.01.T01:CDS
GACGATGCAGATCTACGTCG+TGG 0.671372 contig162end:-29305 MsG0080047993.01.T01:CDS
TCTTAGATTTGTGTAGTACG+AGG 0.674931 contig162end:-31141 MsG0080047993.01.T01:five_prime_UTR
ACAGTTGAACTCATGAATCG+AGG 0.697011 contig162end:+27950 None:intergenic
CAGAAGAAGTTGAGGAACTG+AGG 0.702266 contig162end:-30715 MsG0080047993.01.T01:CDS
CACAGGAAAGACATTCACCA+TGG 0.716563 contig162end:-30154 MsG0080047993.01.T01:intron
CGAGGACTAACACTTGACGA+AGG 0.722588 contig162end:-29042 MsG0080047993.01.T01:CDS
AAAACAACGTCAGAGTTTAG+GGG 0.725459 contig162end:-28155 MsG0080047993.01.T01:CDS
ATTGTGCTAAAGCCAGATGG+TGG 0.741343 contig162end:-29341 MsG0080047993.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAATAAGAAATGA+TGG - contig162end:27760-27779 MsG0080047993.01.T01:CDS 10.0%
!! ACAAATAAAATTATAAAAAG+TGG + contig162end:27289-27308 None:intergenic 10.0%
!! CAAATAAAATTATAAAAAGT+GGG + contig162end:27288-27307 None:intergenic 10.0%
!! TCAATCAAATAATTAAAATT+GGG + contig162end:28455-28474 None:intergenic 10.0%
!! TTCAATCAAATAATTAAAAT+TGG + contig162end:28456-28475 None:intergenic 10.0%
!!! ACTTTTTATAATTTTATTTG+TGG - contig162end:27288-27307 MsG0080047993.01.T01:three_prime_UTR 10.0%
!! ATCATATATTGCAAATAAAT+TGG + contig162end:27564-27583 None:intergenic 15.0%
!! TAGAAATATTCATATAAAAG+CGG - contig162end:29101-29120 MsG0080047993.01.T01:CDS 15.0%
!!! AATTTTTATTAAGTTTACCA+TGG + contig162end:30472-30491 None:intergenic 15.0%
!!! ATAACAAATTATATTTTGCA+TGG + contig162end:30042-30061 None:intergenic 15.0%
!!! ATTTTTATTAAGTTTACCAT+GGG + contig162end:30471-30490 None:intergenic 15.0%
!!! GTAACATAAAATTATTGATT+TGG + contig162end:30102-30121 None:intergenic 15.0%
!!! TAATTTCATTTTGATATTCA+GGG - contig162end:28240-28259 MsG0080047993.01.T01:intron 15.0%
!!! TCAGACATTTTTAATATTAT+AGG + contig162end:30304-30323 None:intergenic 15.0%
!!! TTAATTTCATTTTGATATTC+AGG - contig162end:28239-28258 MsG0080047993.01.T01:intron 15.0%
!! AAATGTGCTTAAAACATAAA+CGG + contig162end:30274-30293 None:intergenic 20.0%
!! AGAAATATTCATATAAAAGC+GGG - contig162end:29102-29121 MsG0080047993.01.T01:CDS 20.0%
!! AGTAAGATATTGGATATAAA+AGG - contig162end:28123-28142 MsG0080047993.01.T01:CDS 20.0%
!! CTATTATCTAATATGTATGT+TGG - contig162end:28748-28767 MsG0080047993.01.T01:intron 20.0%
!! TAAAATTATAAAAAGTGGGA+AGG + contig162end:27284-27303 None:intergenic 20.0%
!! TAAGTTCATAACTACTTTAA+AGG - contig162end:30016-30035 MsG0080047993.01.T01:intron 20.0%
!! TACTTTACTTTACCATAAAT+AGG - contig162end:27723-27742 MsG0080047993.01.T01:CDS 20.0%
!! TCTTTATCATGAAATACTTA+AGG - contig162end:30324-30343 MsG0080047993.01.T01:intron 20.0%
!! TGTTAATTACTTGTTTAACA+TGG - contig162end:31323-31342 MsG0080047993.01.T01:five_prime_UTR 20.0%
!! TTCTATTATATGTTGATGTA+TGG - contig162end:28171-28190 MsG0080047993.01.T01:CDS 20.0%
!!! AAGTTCAAATTTGAAGTTTT+TGG + contig162end:29166-29185 None:intergenic 20.0%
!!! AATTTTGTCTTTTTCAAAAG+TGG - contig162end:29271-29290 MsG0080047993.01.T01:CDS 20.0%
!!! ATCTCAATTTTTCACTATTT+TGG + contig162end:30217-30236 None:intergenic 20.0%
!!! ATGATTTTTTATACTAACCT+TGG + contig162end:28421-28440 None:intergenic 20.0%
!!! GATTTTAAATGATTTGATGA+TGG - contig162end:29040-29059 MsG0080047993.01.T01:CDS 20.0%
!!! GTATTCATAATTCCTTTTAA+AGG + contig162end:31449-31468 None:intergenic 20.0%
!!! GTTATGTTATTTTGATCAAA+GGG - contig162end:28208-28227 MsG0080047993.01.T01:CDS 20.0%
!!! TGTTATGTTATTTTGATCAA+AGG - contig162end:28207-28226 MsG0080047993.01.T01:CDS 20.0%
! AAAGAGAAAGATTAATAGCT+CGG + contig162end:29757-29776 None:intergenic 25.0%
! ATATTGCTAATGTTATCAAG+TGG - contig162end:31206-31225 MsG0080047993.01.T01:five_prime_UTR 25.0%
! ATGTATGATTGAGTTTCTTA+GGG - contig162end:29312-29331 MsG0080047993.01.T01:CDS 25.0%
! ATTTCCACATCAGTAAATTT+CGG + contig162end:28482-28501 None:intergenic 25.0%
! CACATAAGCAAATTACTATA+AGG + contig162end:31377-31396 None:intergenic 25.0%
! GAGAAAACCATGAAAATATT+TGG + contig162end:29555-29574 None:intergenic 25.0%
! TAACTTAATGATTGAGAACA+TGG + contig162end:30943-30962 None:intergenic 25.0%
! TACTTTGCAAATTGAATATG+AGG + contig162end:27934-27953 None:intergenic 25.0%
! TATGTATGATTGAGTTTCTT+AGG - contig162end:29311-29330 MsG0080047993.01.T01:CDS 25.0%
! TGTGATGAAAACTTATTTAG+TGG - contig162end:31393-31412 MsG0080047993.01.T01:five_prime_UTR 25.0%
! TTTCACTTGTCTTTAACAAA+TGG - contig162end:31245-31264 MsG0080047993.01.T01:five_prime_UTR 25.0%
!! AAAATGAAACTGAGGTTTTT+AGG - contig162end:27819-27838 MsG0080047993.01.T01:CDS 25.0%
!! AAAGACAAAATTGATTCAAG+AGG + contig162end:29263-29282 None:intergenic 25.0%
!! AGATACTCCAAATATTTTCA+TGG - contig162end:29545-29564 MsG0080047993.01.T01:intron 25.0%
!! ATTTGGAACGTTATTTGTTT+CGG + contig162end:31028-31047 None:intergenic 25.0%
!! ATTTGTTAAAGACAAGTGAA+AGG + contig162end:31246-31265 None:intergenic 25.0%
!! CTTCTGCTATGATTAATTTT+AGG - contig162end:28771-28790 MsG0080047993.01.T01:intron 25.0%
!! GTTAATATGCATGTTTTCTT+GGG - contig162end:31281-31300 MsG0080047993.01.T01:five_prime_UTR 25.0%
!! TATGAATACAACAGTTTTTC+AGG - contig162end:31460-31479 MsG0080047993.01.T01:five_prime_UTR 25.0%
!! TGTTAATATGCATGTTTTCT+TGG - contig162end:31280-31299 MsG0080047993.01.T01:five_prime_UTR 25.0%
!! TTAATATGCATGTTTTCTTG+GGG - contig162end:31282-31301 MsG0080047993.01.T01:five_prime_UTR 25.0%
!! TTCAGAATTTCTTCTCTTTT+CGG + contig162end:28306-28325 None:intergenic 25.0%
!! TTTATATATCTAGCTTGACA+AGG - contig162end:29603-29622 MsG0080047993.01.T01:intron 25.0%
!!! AGAAATAATTTTGACGTGTT+TGG + contig162end:29237-29256 None:intergenic 25.0%
!!! GAAAGATTTTGAGTTTGATA+AGG - contig162end:28376-28395 MsG0080047993.01.T01:intron 25.0%
!!! GTTTTAGTGAAAATAGCAAA+AGG + contig162end:28984-29003 None:intergenic 25.0%
!!! TACTTTTTCAATGAGTATGT+TGG - contig162end:28879-28898 MsG0080047993.01.T01:intron 25.0%
!!! TGCTATGATTAATTTTAGGA+TGG - contig162end:28775-28794 MsG0080047993.01.T01:intron 25.0%
!!! TTGTTTAACATGGTCTTTTT+TGG - contig162end:31333-31352 MsG0080047993.01.T01:five_prime_UTR 25.0%
AAAAACAACGTCAGAGTTTA+GGG - contig162end:30617-30636 MsG0080047993.01.T01:intron 30.0%
ACTTTCCTGAAGATTATATG+TGG + contig162end:30698-30717 None:intergenic 30.0%
AGTATGTTGGAAGTTTACAT+GGG - contig162end:28892-28911 MsG0080047993.01.T01:intron 30.0%
ATATTCATATAAAAGCGGGT+TGG - contig162end:29106-29125 MsG0080047993.01.T01:CDS 30.0%
CAAATACCATTCATACAGAA+AGG - contig162end:31043-31062 MsG0080047993.01.T01:five_prime_UTR 30.0%
CATTATGTCATCATAGAAGA+AGG - contig162end:31148-31167 MsG0080047993.01.T01:five_prime_UTR 30.0%
CTTTCTGTATGAATGGTATT+TGG + contig162end:31045-31064 None:intergenic 30.0%
GCGTTATGATGAAGTTATTA+TGG + contig162end:27369-27388 None:intergenic 30.0%
GTTTAATTATGCCTCTTATG+CGG - contig162end:29865-29884 MsG0080047993.01.T01:CDS 30.0%
TAATGAAGAAGAGAAGATTC+AGG - contig162end:27787-27806 MsG0080047993.01.T01:CDS 30.0%
TCATGAAATACTTAAGGTGA+TGG - contig162end:30330-30349 MsG0080047993.01.T01:intron 30.0%
TCTCAAATTTGAATCTGATG+AGG + contig162end:31124-31143 None:intergenic 30.0%
! AAGTAAAGAGAAGTTTCTAG+AGG + contig162end:27459-27478 None:intergenic 30.0%
! GTTTTCAGAAAATGAAACTG+AGG - contig162end:27811-27830 MsG0080047993.01.T01:CDS 30.0%
! TAATATGCATGTTTTCTTGG+GGG - contig162end:31283-31302 MsG0080047993.01.T01:five_prime_UTR 30.0%
! TTGGATGTTCTAAGTAGAAT+TGG + contig162end:29218-29237 None:intergenic 30.0%
!! AATTATTGATTTGGATGCAC+TGG + contig162end:30093-30112 None:intergenic 30.0%
!! AGAAGCATTGAGTAAGATAT+TGG - contig162end:28113-28132 MsG0080047993.01.T01:CDS 30.0%
!! AGTTCTTGTAGTGTTGATTA+GGG - contig162end:28147-28166 MsG0080047993.01.T01:CDS 30.0%
!! TAGTTCTTGTAGTGTTGATT+AGG - contig162end:28146-28165 MsG0080047993.01.T01:CDS 30.0%
!!! TTCTTTTACTGACTCATCAT+AGG + contig162end:27604-27623 None:intergenic 30.0%
!!! TTTTGGTTTTTGAGCATGTT+GGG - contig162end:31350-31369 MsG0080047993.01.T01:five_prime_UTR 30.0%
!!! TTTTTGGTTTTTGAGCATGT+TGG - contig162end:31349-31368 MsG0080047993.01.T01:five_prime_UTR 30.0%
AAAACAACGTCAGAGTTTAG+GGG - contig162end:30618-30637 MsG0080047993.01.T01:intron 35.0%
AAAAGAAGATGAACCATCCA+TGG + contig162end:28860-28879 None:intergenic 35.0%
AAACCGAAACAAGTAAGTTG+TGG - contig162end:29663-29682 MsG0080047993.01.T01:intron 35.0%
AAGAGAATCTCTCAGTAGTT+GGG + contig162end:30150-30169 None:intergenic 35.0%
AATATCAACATGACTGACCA+TGG + contig162end:28639-28658 None:intergenic 35.0%
ACAAAAGGAGACGAAGATTA+TGG - contig162end:30567-30586 MsG0080047993.01.T01:intron 35.0%
ACAGTTTCCACTTAGAAACT+TGG + contig162end:30503-30522 None:intergenic 35.0%
AGAGAAAAGTGGATGAAAAG+AGG - contig162end:28088-28107 MsG0080047993.01.T01:CDS 35.0%
AGGATGTCTAATCTGATCTA+AGG - contig162end:31168-31187 MsG0080047993.01.T01:five_prime_UTR 35.0%
AGTTCACGTTACAAGAATCA+CGG - contig162end:27316-27335 MsG0080047993.01.T01:three_prime_UTR 35.0%
ATGATTGAGAACATGGAAAC+TGG + contig162end:30936-30955 None:intergenic 35.0%
ATTCCTGCATTACATGTATG+CGG + contig162end:30540-30559 None:intergenic 35.0%
ATTGCTTCTGAGCAAGAAAT+TGG - contig162end:30865-30884 MsG0080047993.01.T01:CDS 35.0%
CAACTGGAATTGGAAAATCT+CGG - contig162end:30998-31017 MsG0080047993.01.T01:CDS 35.0%
CAGTATAATACTTGCCTGTA+AGG + contig162end:29830-29849 None:intergenic 35.0%
CATCCACAACTTACTTGTTT+CGG + contig162end:29669-29688 None:intergenic 35.0%
CATGCATATTAACACACCTT+TGG + contig162end:31274-31293 None:intergenic 35.0%
CCTCAAAGATGATTTCAAAG+AGG - contig162end:30741-30760 MsG0080047993.01.T01:intron 35.0%
CTTACAGGCAAGTATTATAC+TGG - contig162end:29828-29847 MsG0080047993.01.T01:CDS 35.0%
CTTTAACAAATGGTAGCCAA+AGG - contig162end:31255-31274 MsG0080047993.01.T01:five_prime_UTR 35.0%
GAAAAACAACGTCAGAGTTT+AGG - contig162end:30616-30635 MsG0080047993.01.T01:intron 35.0%
GAGTATGTTGGAAGTTTACA+TGG - contig162end:28891-28910 MsG0080047993.01.T01:intron 35.0%
GATTAGCATATTTAGACGTG+GGG - contig162end:29625-29644 MsG0080047993.01.T01:intron 35.0%
GATTCCAATTCATTGCAGTT+AGG + contig162end:31069-31088 None:intergenic 35.0%
GCAGGAATTGAAGAAACAAA+AGG - contig162end:30552-30571 MsG0080047993.01.T01:intron 35.0%
GGATGTCTAATCTGATCTAA+GGG - contig162end:31169-31188 MsG0080047993.01.T01:five_prime_UTR 35.0%
GTAGACTTCTTAGATGCTTT+AGG + contig162end:30778-30797 None:intergenic 35.0%
GTGCATGTGCAAATGTAATA+TGG - contig162end:30247-30266 MsG0080047993.01.T01:intron 35.0%
GTTTGTCACGAACCTTTAAA+AGG - contig162end:31434-31453 MsG0080047993.01.T01:five_prime_UTR 35.0%
TACCATAAATAGGTGTCTGT+TGG - contig162end:27733-27752 MsG0080047993.01.T01:CDS 35.0%
TACCATGGGTACTTCTTTAT+TGG + contig162end:30457-30476 None:intergenic 35.0%
TCAGTAAAAACCGTTGAAAC+CGG + contig162end:27869-27888 None:intergenic 35.0%
TCCACTTAGAAACTTGGTTT+AGG + contig162end:30497-30516 None:intergenic 35.0%
TCCATTGCAGATCTTAGAAT+CGG + contig162end:28560-28579 None:intergenic 35.0%
TCCTAAACCAAGTTTCTAAG+TGG - contig162end:30493-30512 MsG0080047993.01.T01:CDS 35.0%
TCTTAGATTTGTGTAGTACG+AGG - contig162end:27632-27651 MsG0080047993.01.T01:CDS 35.0%
TGGAAACTGGATTGAATTTC+TGG + contig162end:30923-30942 None:intergenic 35.0%
TTAGGTCAGATTCAGTTGAT+GGG - contig162end:27837-27856 MsG0080047993.01.T01:CDS 35.0%
TTCAGCCACATATAATCTTC+AGG - contig162end:30690-30709 MsG0080047993.01.T01:CDS 35.0%
TTGCTTCTGAGCAAGAAATT+GGG - contig162end:30866-30885 MsG0080047993.01.T01:CDS 35.0%
TTTAATTGTCTAGCCGTCTT+AGG + contig162end:29897-29916 None:intergenic 35.0%
TTTAGGTCAGATTCAGTTGA+TGG - contig162end:27836-27855 MsG0080047993.01.T01:CDS 35.0%
! AGACACTGATTGAACAGTAA+AGG + contig162end:27678-27697 None:intergenic 35.0%
! AGGATTAGCATATTTAGACG+TGG - contig162end:29623-29642 MsG0080047993.01.T01:intron 35.0%
! AGTGTTTTGTAGAATTCGAC+CGG - contig162end:28271-28290 MsG0080047993.01.T01:intron 35.0%
! AGTTTCTAGAGGTTGAAACT+AGG + contig162end:27448-27467 None:intergenic 35.0%
! ATCTCATTCTTTTGTTGCTC+AGG + contig162end:27905-27924 None:intergenic 35.0%
! CAACTTACTTGTTTCGGTTT+TGG + contig162end:29663-29682 None:intergenic 35.0%
! GGATTAGCATATTTAGACGT+GGG - contig162end:29624-29643 MsG0080047993.01.T01:intron 35.0%
! GTTTCTAGAGGTTGAAACTA+GGG + contig162end:27447-27466 None:intergenic 35.0%
! TCAACGGTTTTTACTGATGT+TGG - contig162end:27872-27891 MsG0080047993.01.T01:CDS 35.0%
!! ATTCTAAGATCTGCAATGGA+CGG - contig162end:28560-28579 MsG0080047993.01.T01:intron 35.0%
!! CCTCTTTGAAATCATCTTTG+AGG + contig162end:30744-30763 None:intergenic 35.0%
!! CTTAGATGCTTTAGGAGTTT+CGG + contig162end:30770-30789 None:intergenic 35.0%
AACATCCAGACTGATCCAAA+GGG - contig162end:29368-29387 MsG0080047993.01.T01:CDS 40.0%
AAGGCCTAACTGCAATGAAT+TGG - contig162end:31062-31081 MsG0080047993.01.T01:five_prime_UTR 40.0%
AAGTTGTGGATGGTTGATCT+TGG - contig162end:29677-29696 MsG0080047993.01.T01:intron 40.0%
AATTCTGAACCTGTATCAGC+TGG - contig162end:28317-28336 MsG0080047993.01.T01:intron 40.0%
ACAGTTGAACTCATGAATCG+AGG + contig162end:30826-30845 None:intergenic 40.0%
ACTGAATTGGAGACACTTCT+TGG + contig162end:30802-30821 None:intergenic 40.0%
CAACTACTGAGAGATTCTCT+TGG - contig162end:30149-30168 MsG0080047993.01.T01:intron 40.0%
CAAGAGAATCTCTCAGTAGT+TGG + contig162end:30151-30170 None:intergenic 40.0%
CGAAACAAGTAAGTTGTGGA+TGG - contig162end:29667-29686 MsG0080047993.01.T01:intron 40.0%
CTCCAACAGACACCTATTTA+TGG + contig162end:27738-27757 None:intergenic 40.0%
GAACTTAACCCGAATTCTCT+CGG + contig162end:28345-28364 None:intergenic 40.0%
GACGGCTAGACAATTAAAGT+AGG - contig162end:29899-29918 MsG0080047993.01.T01:CDS 40.0%
GTTAGGCCTTTCTGTATGAA+TGG + contig162end:31052-31071 None:intergenic 40.0%
TATGCGGTTTATGCCTAAGA+CGG - contig162end:29881-29900 MsG0080047993.01.T01:CDS 40.0%
TCAATTTCCACCAATCCCTT+TGG + contig162end:29386-29405 None:intergenic 40.0%
TCGCAAACATCTTCTTCAGA+CGG + contig162end:30387-30406 None:intergenic 40.0%
TCTTCAGGAAAGTGATGACT+TGG - contig162end:30705-30724 MsG0080047993.01.T01:CDS 40.0%
TCTTTCTCTTCAAAGCTGCA+AGG + contig162end:29796-29815 None:intergenic 40.0%
TGAGTTCAACTGTTGCTAGT+CGG - contig162end:30833-30852 MsG0080047993.01.T01:intron 40.0%
TGCTTCTGAGCAAGAAATTG+GGG - contig162end:30867-30886 MsG0080047993.01.T01:CDS 40.0%
TGTGATCTACAAGACTGTCT+GGG + contig162end:28940-28959 None:intergenic 40.0%
TTACCGCATACATGTAATGC+AGG - contig162end:30534-30553 MsG0080047993.01.T01:intron 40.0%
TTAGGCATAAACCGCATAAG+AGG + contig162end:29879-29898 None:intergenic 40.0%
TTGCGAAGTTCAACTGGAAT+TGG - contig162end:30988-31007 MsG0080047993.01.T01:CDS 40.0%
! AAAGGGATTGGTGGAAATTG+AGG - contig162end:29385-29404 MsG0080047993.01.T01:CDS 40.0%
! AAGGGATTGGTGGAAATTGA+GGG - contig162end:29386-29405 MsG0080047993.01.T01:CDS 40.0%
! AATGTGTGCGTTTTCGCTTA+CGG - contig162end:28587-28606 MsG0080047993.01.T01:intron 40.0%
! AGCACCGAAATTTACTGATG+TGG - contig162end:28475-28494 MsG0080047993.01.T01:intron 40.0%
! CGGGTTGGACAATAAATTTG+AGG - contig162end:29121-29140 MsG0080047993.01.T01:CDS 40.0%
! CTCTTTTCGGTCAAATGATC+CGG + contig162end:28293-28312 None:intergenic 40.0%
! GAGAGAATTCGGGTTAAGTT+CGG - contig162end:28344-28363 MsG0080047993.01.T01:intron 40.0%
! GTTTTGTGCAGAAGAAGTTG+AGG - contig162end:28050-28069 MsG0080047993.01.T01:CDS 40.0%
!! AAAAGGTACCCATTTGCTAG+AGG + contig162end:28967-28986 None:intergenic 40.0%
!! ATCATCTTTGAGGCTAGTAG+AGG + contig162end:30734-30753 None:intergenic 40.0%
!! GGGTAATTTGTTTGAGACTC+TGG - contig162end:29332-29351 MsG0080047993.01.T01:CDS 40.0%
!! GTCCAATAAAGAAGTACCCA+TGG - contig162end:30452-30471 MsG0080047993.01.T01:CDS 40.0%
!! TTCAGTTGATGGGTTGTTAC+CGG - contig162end:27847-27866 MsG0080047993.01.T01:CDS 40.0%
!! TTGCAGCTTTGAAGAGAAAG+AGG - contig162end:29795-29814 MsG0080047993.01.T01:intron 40.0%
AAGTTTACATGGGCAGTGTC+AGG - contig162end:28902-28921 MsG0080047993.01.T01:intron 45.0%
AGTTTACATGGGCAGTGTCA+GGG - contig162end:28903-28922 MsG0080047993.01.T01:intron 45.0%
ATGGTACAAATGAGCAGCCA+GGG - contig162end:28794-28813 MsG0080047993.01.T01:intron 45.0%
ATTGTGCTAAAGCCAGATGG+TGG - contig162end:29432-29451 MsG0080047993.01.T01:intron 45.0%
CAACATCCAGACTGATCCAA+AGG - contig162end:29367-29386 MsG0080047993.01.T01:CDS 45.0%
CACACCAACCTCTAGCAAAT+GGG - contig162end:28956-28975 MsG0080047993.01.T01:intron 45.0%
CACAGGAAAGACATTCACCA+TGG - contig162end:28619-28638 MsG0080047993.01.T01:intron 45.0%
CAGAAGAAGTTGAGGAACTG+AGG - contig162end:28058-28077 MsG0080047993.01.T01:CDS 45.0%
CGCAAACATCTTCTTCAGAC+GGG + contig162end:30386-30405 None:intergenic 45.0%
CGTAACTCCTCGAAGTACAA+AGG - contig162end:31095-31114 MsG0080047993.01.T01:five_prime_UTR 45.0%
CTGATTGTGCTAAAGCCAGA+TGG - contig162end:29429-29448 MsG0080047993.01.T01:intron 45.0%
CTTCGTCAAGTGTTAGTCCT+CGG + contig162end:29733-29752 None:intergenic 45.0%
CTTCTGAGCAAGAAATTGGG+GGG - contig162end:30869-30888 MsG0080047993.01.T01:CDS 45.0%
GAGGTAACCTTTGTACTTCG+AGG + contig162end:31105-31124 None:intergenic 45.0%
GCAGTATTGCGAAGTTCAAC+TGG - contig162end:30982-31001 MsG0080047993.01.T01:CDS 45.0%
GCTTCTGAGCAAGAAATTGG+GGG - contig162end:30868-30887 MsG0080047993.01.T01:CDS 45.0%
GGCTTGACTATGTAGTAGCA+TGG - contig162end:31481-31500 MsG0080047993.01.T01:five_prime_UTR 45.0%
GTGTGATCTACAAGACTGTC+TGG + contig162end:28941-28960 None:intergenic 45.0%
TCACACCAACCTCTAGCAAA+TGG - contig162end:28955-28974 MsG0080047993.01.T01:intron 45.0%
TTCGTCAAGTGTTAGTCCTC+GGG + contig162end:29732-29751 None:intergenic 45.0%
TTGTGGATGGTTGATCTTGG+AGG - contig162end:29680-29699 MsG0080047993.01.T01:intron 45.0%
TTTCCTCAAGAAGCAAGCCA+AGG - contig162end:28401-28420 MsG0080047993.01.T01:intron 45.0%
TTTCGTCAAGCATCCATGGA+TGG - contig162end:28844-28863 MsG0080047993.01.T01:intron 45.0%
! AAAAAGTGGGAAGGTGTGCT+AGG + contig162end:27275-27294 None:intergenic 45.0%
! AAAAGTGGGAAGGTGTGCTA+GGG + contig162end:27274-27293 None:intergenic 45.0%
! ACGTAAATGAGGCATCAAGC+AGG - contig162end:29495-29514 MsG0080047993.01.T01:intron 45.0%
! AGAATTCGGGTTAAGTTCGG+AGG - contig162end:28347-28366 MsG0080047993.01.T01:intron 45.0%
! GTCGTGGACTAACGTAAATG+AGG - contig162end:29484-29503 MsG0080047993.01.T01:intron 45.0%
! GTTTTCGCTTACGGTCAAAC+AGG - contig162end:28596-28615 MsG0080047993.01.T01:intron 45.0%
! TACTTAAGGTGATGGCTCGA+AGG - contig162end:30338-30357 MsG0080047993.01.T01:intron 45.0%
!! AGAGGTGTCATGTACCTTAC+AGG - contig162end:29813-29832 MsG0080047993.01.T01:intron 45.0%
!! CATGAATCGAGGCACTGAAT+TGG + contig162end:30815-30834 None:intergenic 45.0%
!! GCCGATTCTAAGATCTGCAA+TGG - contig162end:28556-28575 MsG0080047993.01.T01:intron 45.0%
!! TAACCTTGGCTTGCTTCTTG+AGG + contig162end:28407-28426 None:intergenic 45.0%
!! TGGGTTGTTACCGGTTTCAA+CGG - contig162end:27856-27875 MsG0080047993.01.T01:CDS 45.0%
!!! ATTTTTATTTTTTTTCATTT+TGG - contig162end:27987-28006 MsG0080047993.01.T01:CDS 5.0%
AGAGCACGAGGAATAATCCC+TGG + contig162end:28814-28833 None:intergenic 50.0%
AGCGAGCGGTTGCTAAAAAC+TGG - contig162end:29704-29723 MsG0080047993.01.T01:intron 50.0%
AGCTGGATCCGAGAGAATTC+GGG - contig162end:28334-28353 MsG0080047993.01.T01:intron 50.0%
AGGCATCAAGCAGGTCACAT+TGG - contig162end:29504-29523 MsG0080047993.01.T01:intron 50.0%
CAACTGTTGCTAGTCGGCAT+AGG - contig162end:30839-30858 MsG0080047993.01.T01:intron 50.0%
CAGCTGGATCCGAGAGAATT+CGG - contig162end:28333-28352 MsG0080047993.01.T01:intron 50.0%
CAGTGTCTGTCTTGTGTACG+AGG - contig162end:27690-27709 MsG0080047993.01.T01:CDS 50.0%
CCAATCCCTTTGGATCAGTC+TGG + contig162end:29376-29395 None:intergenic 50.0%
CCAGACTGATCCAAAGGGAT+TGG - contig162end:29373-29392 MsG0080047993.01.T01:CDS 50.0%
CGAGCGGTTGCTAAAAACTG+GGG - contig162end:29706-29725 MsG0080047993.01.T01:intron 50.0%
CGAGGACTAACACTTGACGA+AGG - contig162end:29731-29750 MsG0080047993.01.T01:intron 50.0%
GACGAAGATTATGGAGCTCG+AGG - contig162end:30576-30595 MsG0080047993.01.T01:intron 50.0%
GACTGATCCAAAGGGATTGG+TGG - contig162end:29376-29395 MsG0080047993.01.T01:CDS 50.0%
GAGGCTGAAGCAGAGAAAAG+TGG - contig162end:28077-28096 MsG0080047993.01.T01:CDS 50.0%
GATGGTACAAATGAGCAGCC+AGG - contig162end:28793-28812 MsG0080047993.01.T01:intron 50.0%
GCGAGCGGTTGCTAAAAACT+GGG - contig162end:29705-29724 MsG0080047993.01.T01:intron 50.0%
GCTCTTTCGTCAAGCATCCA+TGG - contig162end:28840-28859 MsG0080047993.01.T01:intron 50.0%
GGAGCTCGAGGAAGACATTA+AGG - contig162end:30588-30607 MsG0080047993.01.T01:intron 50.0%
GGGTTAAGTTCGGAGGAACA+AGG - contig162end:28354-28373 MsG0080047993.01.T01:intron 50.0%
! AGCCAGATGGTGGTACAACA+AGG - contig162end:29442-29461 MsG0080047993.01.T01:intron 50.0%
! GCCAGATGGTGGTACAACAA+GGG - contig162end:29443-29462 MsG0080047993.01.T01:intron 50.0%
! GGTACCCATTTGCTAGAGGT+TGG + contig162end:28963-28982 None:intergenic 50.0%
! TCCCTTGTTGTACCACCATC+TGG + contig162end:29447-29466 None:intergenic 50.0%
!! GCATGTTTTCTTGGGGGTGT+TGG - contig162end:31289-31308 MsG0080047993.01.T01:five_prime_UTR 50.0%
!!! TGTTTTCTTGGGGGTGTTGG+TGG - contig162end:31292-31311 MsG0080047993.01.T01:five_prime_UTR 50.0%
CTCTCGGATCCAGCTGATAC+AGG + contig162end:28329-28348 None:intergenic 55.0%
GACGATGCAGATCTACGTCG+TGG - contig162end:29468-29487 MsG0080047993.01.T01:intron 55.0%
GCTTACGGTCAAACAGGCAC+AGG - contig162end:28602-28621 MsG0080047993.01.T01:intron 55.0%
TTGATCTTGGAGGCAGCGAG+CGG - contig162end:29690-29709 MsG0080047993.01.T01:intron 55.0%
TTGCTAAAAACTGGGGCCCG+AGG - contig162end:29713-29732 MsG0080047993.01.T01:intron 55.0%
! AAGAGCTCTTCGAGAGCACG+AGG + contig162end:28826-28845 None:intergenic 55.0%
! GGAAGGTGTGCTAGGGATCA+AGG + contig162end:27267-27286 None:intergenic 55.0%
!! TTCTTGGGGGTGTTGGTGGT+TGG - contig162end:31296-31315 MsG0080047993.01.T01:five_prime_UTR 55.0%
GGGCAGTGTCAGGGATCTGC+TGG - contig162end:28912-28931 MsG0080047993.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
contig162end gene 27237 31558 27237 ID=MsG0080047993.01;Name=MsG0080047993.01
contig162end mRNA 27237 31558 27237 ID=MsG0080047993.01.T01;Parent=MsG0080047993.01;Name=MsG0080047993.01.T01;_AED=0.22;_eAED=0.22;_QI=539|0.85|0.87|1|1|1|8|370|577
contig162end exon 27237 28239 27237 ID=MsG0080047993.01.T01:exon:8243;Parent=MsG0080047993.01.T01
contig162end exon 28957 29179 28957 ID=MsG0080047993.01.T01:exon:8242;Parent=MsG0080047993.01.T01
contig162end exon 29270 29434 29270 ID=MsG0080047993.01.T01:exon:8241;Parent=MsG0080047993.01.T01
contig162end exon 29818 30002 29818 ID=MsG0080047993.01.T01:exon:8240;Parent=MsG0080047993.01.T01
contig162end exon 30155 30261 30155 ID=MsG0080047993.01.T01:exon:8239;Parent=MsG0080047993.01.T01
contig162end exon 30373 30534 30373 ID=MsG0080047993.01.T01:exon:8238;Parent=MsG0080047993.01.T01
contig162end exon 30651 30734 30651 ID=MsG0080047993.01.T01:exon:8237;Parent=MsG0080047993.01.T01
contig162end exon 30845 31558 30845 ID=MsG0080047993.01.T01:exon:8236;Parent=MsG0080047993.01.T01
contig162end five_prime_UTR 31020 31558 31020 ID=MsG0080047993.01.T01:five_prime_utr;Parent=MsG0080047993.01.T01
contig162end CDS 30845 31019 30845 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 30651 30734 30651 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 30373 30534 30373 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 30155 30261 30155 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 29818 30002 29818 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 29270 29434 29270 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 28957 29179 28957 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end CDS 27607 28239 27607 ID=MsG0080047993.01.T01:cds;Parent=MsG0080047993.01.T01
contig162end three_prime_UTR 27237 27606 27237 ID=MsG0080047993.01.T01:three_prime_utr;Parent=MsG0080047993.01.T01
Gene Sequence

>MsG0080047993.01.T01

ATGATGGTTTGTAATGAAGAAGAGAAGATTCAGGTGTTTTCAGAAAATGAAACTGAGGTTTTTAGGTCAGATTCAGTTGATGGGTTGTTACCGGTTTCAACGGTTTTTACTGATGTTGGAGTTGTGCCTGAGCAACAAAAGAATGAGATTGAACACCTCATATTCAATTTGCAAAAAGAAGTTGAGGAACTGAGGCTGAAGCAGAGAAAAGTGGATGAAAAGAGGAGAGAAGCATTGAGTAAGATATTGGATATAAAAGGGAGCATTCGAGTGTTTTGTAGAATTCGACCGGATCATTTGACCGAAAAGAGAAGAAATTCTGAACCTGTATCAGCTGGATCCGAGAGAATTCGGGTTAAGTTCGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAAGCAAGCCAAGAAAGTGTTTTTGTTGATGTCGAGCCGATTCTAAGATCTGCAATGGACGGACACAATGTGTGCGTTTTCGCTTACGGTCAAACAGGCACAGGAAAGACATTCACCATGGATGGTACAAATGAGCAGCCAGGGATTATTCCTCGTGCTCTCGAAGAGCTCTTTCGTCAAGCATCCATGGATGGTTCATCTTCTTTTACTTTTTCAATGAGTATGTTGGAAGTTTACATGGGCAGTGTCAGGGATCTGCTGGCTCCCAGACAGTCTTGTAGATCACACCAACCTCTAGCAAATGGCAATCTCAACATCCAGACTGATCCAAAGGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCTGATTGTGCTAAAGCCAGATGGTGGTACAACAAGGGAAGACGATGCAGATCTACGTCGTGGACTAACGTAAATGAGGCATCAAGCAGGTCACATTGCTTGACAAGGATTAGCATATTTAGACGTGGGGATACTTCAGAAGCCAAAACCGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGCGAGCGGTTGCTAAAAACTGGGGCCCGAGGACTAACACTTGACGAAGGCCGAGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTACCTTACAGGCAAGAATTGAAGAAACAAAAGGAGACGAAGATTATGGAGCTCGAGGAAGACATTAAGGAAGCTGAAAAACAACGTCAGAGTTTAGGGGATCAAATACAGAATGTCGAGTTAAAGTTATGCGAGAATAAAAAGCTCTTTTCAGCCACATATAATCTTCAGGAAAGTGATGACTTGGAAACCTCTACTAGCCTCAAAGATGATTTCAAAGAGGTCACCGAAACTCCTAAAGCATCTAAGAAGTCTACTCCAAGAAGTGTCTCCAATTCAGTGCCTCGATTCATGAGTTCAACTGTTGCTAGTCGGCATAGGCAAATTGCTTCTGAGCAAGAAATTGGGGGGAGAACAAAAAGTTTAAGATCAGTAGTCACCAGAAATTCAATCCAGTTTCCATGTTCTCAATCATTAAGTTATTCAGATCTTCGCATCAAAGCAGTATTGCGAAGTTCAACTGGAATTGGAAAATCTCGGCATGCCGAAACAAATAACGTTCCAAATACCATTCATACAGAAAGGCCTAACTGCAATGAATTGGAATCAAAAGTCGTAACTCCTCGAAGTACAAAGGTTACCTCATCAGATTCAAATTTGAGAGTAACATTATGTCATCATAGAAGAAGGATGTCTAATCTGATCTAA
Protein sequence

>MsG0080047993.01.T01

MMVCNEEEKIQVFSENETEVFRSDSVDGLLPVSTVFTDVGVVPEQQKNEIEHLIFNLQKEVEELRLKQRKVDEKRREALSKILDIKGSIRVFCRIRPDHLTEKRRNSEPVSAGSERIRVKFGGTRKDFEFDKVFPQEASQESVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQASMDGSSSFTFSMSMLEVYMGSVRDLLAPRQSCRSHQPLANGNLNIQTDPKGLVEIEGLSEVQISDCAKARWWYNKGRRCRSTSWTNVNEASSRSHCLTRISIFRRGDTSEAKTETSKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRQELKKQKETKIMELEEDIKEAEKQRQSLGDQIQNVELKLCENKKLFSATYNLQESDDLETSTSLKDDFKEVTETPKASKKSTPRSVSNSVPRFMSSTVASRHRQIASEQEIGGRTKSLRSVVTRNSIQFPCSQSLSYSDLRIKAVLRSSTGIGKSRHAETNNVPNTIHTERPNCNELESKVVTPRSTKVTSSDSNLRVTLCHHRRRMSNLI*