AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049021.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049021.01.T01 MTR_7g100510 92.875 393 22 2 1 390 1 390 0.0 754
MsG0080049021.01.T01 MTR_7g100510 59.322 59 23 1 187 244 362 420 9.16e-16 79.3
MsG0080049021.01.T01 MTR_7g011820 45.992 237 95 6 171 387 213 436 1.24e-53 186
MsG0080049021.01.T01 MTR_7g011820 51.351 74 35 1 187 259 411 484 3.54e-15 77.8
MsG0080049021.01.T01 MTR_5g042920 46.256 227 96 7 171 387 136 346 2.82e-53 184
MsG0080049021.01.T01 MTR_5g042920 62.712 59 21 1 187 244 321 379 1.14e-16 82.0
MsG0080049021.01.T01 MTR_5g094430 41.509 265 132 7 132 387 6 256 2.26e-49 172
MsG0080049021.01.T01 MTR_5g094430 59.322 59 23 1 187 244 231 289 5.79e-15 76.6
MsG0080049021.01.T01 MTR_5g094430 41.509 265 132 7 132 387 140 390 2.80e-49 175
MsG0080049021.01.T01 MTR_5g094430 59.322 59 23 1 187 244 365 423 4.40e-15 77.4
MsG0080049021.01.T01 MTR_5g094430 41.509 265 132 7 132 387 28 278 3.21e-49 173
MsG0080049021.01.T01 MTR_5g094430 59.322 59 23 1 187 244 253 311 5.92e-15 76.6
MsG0080049021.01.T01 MTR_7g080020 42.460 252 103 5 168 378 263 513 2.24e-48 176
MsG0080049021.01.T01 MTR_7g080020 51.429 70 33 1 187 255 494 563 1.94e-13 72.8
MsG0080049021.01.T01 MTR_3g009470 34.903 361 165 9 71 378 172 515 1.31e-47 170
MsG0080049021.01.T01 MTR_3g031220 49.010 202 86 4 183 378 195 385 4.30e-47 166
MsG0080049021.01.T01 MTR_3g009470 34.688 369 170 10 71 387 172 521 1.24e-46 171
MsG0080049021.01.T01 MTR_3g009470 59.322 59 23 1 187 244 496 554 1.01e-13 73.6
MsG0080049021.01.T01 MTR_5g074400 45.833 216 103 4 183 390 240 449 1.28e-46 169
MsG0080049021.01.T01 MTR_5g074400 60.000 70 25 2 187 255 421 488 1.72e-17 85.1
MsG0080049021.01.T01 MTR_3g031220 49.010 202 86 4 183 378 195 385 4.56e-46 166
MsG0080049021.01.T01 MTR_3g031220 61.017 59 22 1 187 244 366 424 4.76e-15 77.4
MsG0080049021.01.T01 MTR_3g056100 47.343 207 93 5 181 387 94 284 5.69e-46 164
MsG0080049021.01.T01 MTR_3g056100 59.322 59 23 1 187 244 259 317 8.44e-15 76.3
MsG0080049021.01.T01 MTR_3g056100 47.343 207 93 5 181 387 238 428 5.81e-46 167
MsG0080049021.01.T01 MTR_3g056100 59.322 59 23 1 187 244 403 461 5.34e-15 77.4
MsG0080049021.01.T01 MTR_3g056100 44.186 215 101 5 181 387 94 297 8.12e-46 164
MsG0080049021.01.T01 MTR_3g056100 59.322 59 23 1 187 244 272 330 8.99e-15 76.3
MsG0080049021.01.T01 MTR_3g056100 44.186 215 101 5 181 387 238 441 1.05e-45 166
MsG0080049021.01.T01 MTR_3g056100 59.322 59 23 1 187 244 416 474 5.63e-15 77.4
MsG0080049021.01.T01 MTR_7g080000 41.423 239 109 5 168 378 217 452 5.02e-45 166
MsG0080049021.01.T01 MTR_7g080000 57.627 59 24 1 187 244 433 491 3.83e-13 71.6
MsG0080049021.01.T01 MTR_7g071120 46.939 196 86 3 185 378 165 344 1.72e-44 161
MsG0080049021.01.T01 MTR_7g071120 45.882 85 44 2 161 244 300 383 1.19e-13 72.8
MsG0080049021.01.T01 MTR_4g013260 40.486 247 106 7 136 378 147 356 3.60e-43 158
MsG0080049021.01.T01 MTR_4g013260 57.627 59 24 1 187 244 337 395 1.69e-13 72.4
MsG0080049021.01.T01 MTR_4g082580 43.062 209 75 7 180 387 139 304 7.79e-42 152
MsG0080049021.01.T01 MTR_4g082580 62.712 59 21 1 187 244 279 337 1.50e-16 81.3
MsG0080049021.01.T01 MTR_6g046600 95.588 68 3 0 202 269 18 85 6.24e-41 141
MsG0080049021.01.T01 MTR_5g097490 33.796 216 112 4 176 378 75 272 2.44e-28 115
MsG0080049021.01.T01 MTR_5g097490 55.932 59 25 1 187 244 253 311 3.98e-15 77.0
MsG0080049021.01.T01 MTR_4g130900 33.971 209 133 3 173 378 173 379 8.41e-27 112
MsG0080049021.01.T01 MTR_4g130900 55.224 67 29 1 185 250 358 424 4.48e-17 83.6
MsG0080049021.01.T01 MTR_5g074200 66.176 68 22 1 187 253 221 288 1.84e-24 103
MsG0080049021.01.T01 MTR_2g033820 51.250 80 29 2 187 256 204 283 1.27e-16 81.3
MsG0080049021.01.T01 MTR_8g067650 48.276 87 43 2 171 255 324 410 1.30e-16 82.0
MsG0080049021.01.T01 MTR_4g007060 50.725 69 32 2 187 253 129 197 1.73e-16 79.7
MsG0080049021.01.T01 MTR_4g094588 55.882 68 29 1 187 253 179 246 1.75e-16 80.5
MsG0080049021.01.T01 MTR_4g007060 50.725 69 32 2 187 253 163 231 2.31e-16 79.7
MsG0080049021.01.T01 MTR_5g091390 62.712 59 21 1 187 244 158 216 2.41e-16 79.7
MsG0080049021.01.T01 MTR_7g079010 56.923 65 27 1 178 241 133 197 3.00e-16 77.8
MsG0080049021.01.T01 MTR_1g099600 46.053 76 39 2 181 254 180 255 3.80e-16 79.3
MsG0080049021.01.T01 MTR_7g109800 53.425 73 32 2 187 258 146 217 4.17e-16 79.0
MsG0080049021.01.T01 MTR_1g086790 46.341 82 38 2 187 262 159 240 5.02e-16 79.0
MsG0080049021.01.T01 MTR_1g009613 47.619 84 41 3 177 258 254 336 5.73e-16 79.0
MsG0080049021.01.T01 MTR_8g007270 62.500 56 20 1 187 241 155 210 5.89e-16 77.0
MsG0080049021.01.T01 MTR_2g024380 48.276 87 43 2 171 255 236 322 6.71e-16 79.7
MsG0080049021.01.T01 MTR_4g122530 52.000 75 32 2 187 260 209 280 8.61e-16 79.3
MsG0080049021.01.T01 MTR_1g013760 52.000 75 27 4 187 259 141 208 9.12e-16 77.8
MsG0080049021.01.T01 MTR_2g024350 53.521 71 31 2 187 255 9 79 1.05e-15 76.3
MsG0080049021.01.T01 MTR_3g106060 48.052 77 36 3 173 245 123 199 1.35e-15 77.4
MsG0080049021.01.T01 MTR_8g096730 55.357 56 24 1 187 241 71 126 2.40e-15 73.2
MsG0080049021.01.T01 MTR_8g067635 48.052 77 38 2 181 255 344 420 6.14e-15 77.0
MsG0080049021.01.T01 MTR_4g094908 53.731 67 28 3 177 241 258 323 6.18e-15 75.9
MsG0080049021.01.T01 MTR_8g069935 46.988 83 35 3 182 262 327 402 7.87e-15 76.6
MsG0080049021.01.T01 MTR_2g105060 53.333 60 26 2 187 244 95 154 1.10e-14 73.6
MsG0080049021.01.T01 MTR_5g016610 51.429 70 31 3 174 241 188 256 1.23e-14 73.9
MsG0080049021.01.T01 MTR_1g070455 52.055 73 30 4 175 243 281 352 1.34e-14 75.1
MsG0080049021.01.T01 MTR_5g067680 49.275 69 29 3 176 239 192 259 1.39e-14 75.1
MsG0080049021.01.T01 MTR_8g092140 57.143 56 23 1 187 241 161 216 1.42e-14 73.2
MsG0080049021.01.T01 MTR_2g105060 53.333 60 26 2 187 244 170 229 1.53e-14 74.3
MsG0080049021.01.T01 MTR_3g095080 57.143 56 23 1 187 241 169 224 1.69e-14 73.2
MsG0080049021.01.T01 MTR_3g095080 57.143 56 23 1 187 241 145 200 2.07e-14 72.4
MsG0080049021.01.T01 MTR_5g043880 60.714 56 21 1 187 241 125 180 2.18e-14 73.6
MsG0080049021.01.T01 MTR_1g013790 47.143 70 35 2 187 254 102 171 2.71e-14 72.8
MsG0080049021.01.T01 MTR_8g098945 52.113 71 30 3 187 255 130 198 3.25e-14 72.8
MsG0080049021.01.T01 MTR_4g127040 50.725 69 31 3 177 243 237 304 3.31e-14 73.6
MsG0080049021.01.T01 MTR_2g016770 49.206 63 30 2 184 244 33 95 3.40e-14 71.6
MsG0080049021.01.T01 MTR_8g087000 50.794 63 29 2 184 244 75 137 4.14e-14 72.0
MsG0080049021.01.T01 MTR_8g099350 45.679 81 38 3 163 239 111 189 4.25e-14 73.6
MsG0080049021.01.T01 MTR_8g087000 50.794 63 29 2 184 244 74 136 4.79e-14 72.0
MsG0080049021.01.T01 MTR_2g016770 49.206 63 30 2 184 244 25 87 5.10e-14 71.2
MsG0080049021.01.T01 MTR_7g028415 53.571 56 25 1 187 241 94 149 7.99e-14 69.7
MsG0080049021.01.T01 MTR_7g028710 53.571 56 25 1 187 241 94 149 7.99e-14 69.7
MsG0080049021.01.T01 MTR_6g086555 51.515 66 30 2 187 250 207 272 8.48e-14 73.2
MsG0080049021.01.T01 MTR_3g095040 55.932 59 25 1 187 244 119 177 1.30e-13 69.7
MsG0080049021.01.T01 MTR_1g077780 52.542 59 27 1 187 244 63 121 1.48e-13 68.2
MsG0080049021.01.T01 MTR_4g107970 50.746 67 30 3 181 244 172 238 1.63e-13 72.8
MsG0080049021.01.T01 MTR_7g062220 58.929 56 22 1 187 241 125 180 1.65e-13 71.2
MsG0080049021.01.T01 MTR_4g107970 50.746 67 30 3 181 244 249 315 2.46e-13 72.0
MsG0080049021.01.T01 MTR_4g094412 53.333 60 26 2 187 244 235 294 2.62e-13 71.6
MsG0080049021.01.T01 MTR_4g094412 53.333 60 26 2 187 244 244 303 2.93e-13 71.6
MsG0080049021.01.T01 MTR_3g053330 44.000 75 40 2 187 259 252 326 3.70e-13 71.2
MsG0080049021.01.T01 MTR_8g028565 44.737 76 40 2 181 254 150 225 4.51e-13 70.5
MsG0080049021.01.T01 MTR_7g109600 53.333 60 26 2 187 244 54 113 6.09e-13 68.9
MsG0080049021.01.T01 MTR_1g015140 53.571 56 25 1 187 241 103 158 6.46e-13 66.6
MsG0080049021.01.T01 MTR_5g097500 49.153 59 30 0 187 245 84 142 8.58e-13 69.3
MsG0080049021.01.T01 MTR_5g097500 45.588 68 36 1 178 244 222 289 4.75e-12 67.0
MsG0080049021.01.T01 MTR_2g083870 47.143 70 35 2 184 251 78 147 1.39e-12 67.8
MsG0080049021.01.T01 MTR_3g108960 41.379 87 48 3 166 250 295 380 1.63e-12 68.9
MsG0080049021.01.T01 MTR_4g049790 45.833 72 37 2 187 256 313 384 1.66e-12 69.7
MsG0080049021.01.T01 MTR_7g110720 51.667 60 27 2 187 244 190 249 1.87e-12 68.9
MsG0080049021.01.T01 MTR_7g110720 51.667 60 27 2 187 244 217 276 2.10e-12 68.9
MsG0080049021.01.T01 MTR_2g032030 47.143 70 35 2 187 254 268 337 2.31e-12 68.6
MsG0080049021.01.T01 MTR_7g009730 51.562 64 28 3 181 241 213 276 2.38e-12 68.9
MsG0080049021.01.T01 MTR_7g079040 45.833 72 37 2 185 254 153 224 2.57e-12 67.8
MsG0080049021.01.T01 MTR_2g023930 51.667 60 27 2 187 244 306 365 2.77e-12 68.9
MsG0080049021.01.T01 MTR_3g090860 51.667 60 25 2 184 239 131 190 3.15e-12 67.8
MsG0080049021.01.T01 MTR_2g032030 47.143 70 35 2 187 254 268 337 3.54e-12 68.2
MsG0080049021.01.T01 MTR_2g045360 44.595 74 39 2 187 258 212 285 4.29e-12 67.8
MsG0080049021.01.T01 MTR_0117s0040 47.761 67 32 3 177 241 66 131 4.64e-12 66.2
MsG0080049021.01.T01 MTR_4g132430 50.000 60 28 2 187 244 128 187 6.32e-12 67.0
MsG0080049021.01.T01 MTR_3g104750 51.786 56 26 1 187 241 105 160 8.26e-12 63.5
MsG0080049021.01.T01 MTR_8g092010 54.237 59 26 1 187 244 109 167 8.94e-12 63.9
MsG0080049021.01.T01 MTR_4g132430 50.000 60 28 2 187 244 262 321 1.21e-11 66.6
MsG0080049021.01.T01 MTR_2g088000 50.000 60 28 2 187 244 350 409 1.48e-11 66.6
MsG0080049021.01.T01 MTR_4g049760 43.056 72 39 2 187 256 291 362 1.81e-11 66.2
MsG0080049021.01.T01 MTR_8g027860 49.123 57 25 2 187 239 137 193 1.94e-11 65.5
MsG0080049021.01.T01 MTR_1g078260 51.724 58 26 2 187 242 248 305 5.16e-11 64.7
MsG0080049021.01.T01 MTR_4g021780 46.875 64 33 1 182 245 19 81 8.23e-11 59.7
MsG0080049021.01.T01 MTR_7g117200 36.170 94 54 3 187 274 119 212 8.31e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049021.01.T01 AT2G37260 39.904 416 185 15 2 390 1 378 2.20e-80 254
MsG0080049021.01.T01 AT2G37260 58.929 56 22 1 187 241 350 405 4.31e-14 73.9
MsG0080049021.01.T01 AT2G37260 40.541 333 135 11 81 390 4 296 5.08e-62 204
MsG0080049021.01.T01 AT2G37260 58.929 56 22 1 187 241 268 323 4.60e-14 73.6
MsG0080049021.01.T01 AT2G37260 40.240 333 138 11 81 390 4 298 9.32e-61 201
MsG0080049021.01.T01 AT2G37260 58.929 56 22 1 187 241 270 325 4.54e-14 73.6
MsG0080049021.01.T01 AT2G03340 49.000 200 93 4 180 378 244 435 6.75e-55 190
MsG0080049021.01.T01 AT2G03340 61.017 59 22 1 187 244 416 474 9.74e-17 82.4
MsG0080049021.01.T01 AT1G13960 44.545 220 103 4 180 387 70 282 2.25e-52 179
MsG0080049021.01.T01 AT1G13960 61.017 59 22 1 187 244 257 315 2.09e-16 80.5
MsG0080049021.01.T01 AT1G13960 44.545 220 103 4 180 387 223 435 2.34e-51 180
MsG0080049021.01.T01 AT1G13960 61.017 59 22 1 187 244 410 468 1.76e-16 81.6
MsG0080049021.01.T01 AT2G38470 49.074 216 95 6 183 389 181 390 3.43e-47 169
MsG0080049021.01.T01 AT2G38470 61.017 59 22 1 187 244 363 421 6.98e-15 77.0
MsG0080049021.01.T01 AT4G26640 40.076 262 129 9 138 387 90 335 9.37e-46 165
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 310 368 5.28e-14 73.9
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 1.85e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.10e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.22e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.39e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.45e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.45e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.48e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.48e-45 169
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 2.88e-45 168
MsG0080049021.01.T01 AT4G26640 44.608 204 102 6 187 387 36 231 3.11e-45 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 206 264 5.45e-14 73.6
MsG0080049021.01.T01 AT4G26640 44.608 204 102 6 187 387 36 231 3.11e-45 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 206 264 5.45e-14 73.6
MsG0080049021.01.T01 AT4G26640 44.608 204 102 6 187 387 36 231 3.11e-45 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 206 264 5.45e-14 73.6
MsG0080049021.01.T01 AT4G26640 44.608 204 102 6 187 387 36 231 3.11e-45 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 206 264 5.45e-14 73.6
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 395 595 3.46e-45 168
MsG0080049021.01.T01 AT4G12020 46.117 206 100 4 180 379 462 662 5.29e-45 167
MsG0080049021.01.T01 AT4G26440 39.184 245 123 5 166 387 157 398 1.29e-44 163
MsG0080049021.01.T01 AT4G26440 46.667 90 44 3 187 275 373 459 1.83e-13 72.4
MsG0080049021.01.T01 AT4G26640 33.141 347 183 10 78 387 33 367 3.15e-44 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 342 400 4.49e-14 74.3
MsG0080049021.01.T01 AT4G26640 33.236 343 188 10 78 387 73 407 6.03e-44 161
MsG0080049021.01.T01 AT4G26640 57.627 59 24 1 187 244 382 440 4.52e-14 74.3
MsG0080049021.01.T01 AT5G56270 43.443 244 82 8 184 378 271 507 1.69e-43 161
MsG0080049021.01.T01 AT5G56270 61.017 59 22 1 187 244 488 546 8.93e-15 77.0
MsG0080049021.01.T01 AT5G07100 41.333 225 64 6 180 395 18 183 3.14e-42 148
MsG0080049021.01.T01 AT5G07100 46.250 80 41 2 166 244 122 200 4.00e-14 71.6
MsG0080049021.01.T01 AT5G07100 41.333 225 64 6 180 395 18 183 3.14e-42 148
MsG0080049021.01.T01 AT5G07100 46.250 80 41 2 166 244 122 200 4.00e-14 71.6
MsG0080049021.01.T01 AT5G07100 41.333 225 64 6 180 395 18 183 3.14e-42 148
MsG0080049021.01.T01 AT5G07100 46.250 80 41 2 166 244 122 200 4.00e-14 71.6
MsG0080049021.01.T01 AT5G07100 41.333 225 64 6 180 395 18 183 3.14e-42 148
MsG0080049021.01.T01 AT5G07100 46.250 80 41 2 166 244 122 200 4.00e-14 71.6
MsG0080049021.01.T01 AT5G07100 41.333 225 64 6 180 395 111 276 1.02e-41 150
MsG0080049021.01.T01 AT5G07100 46.250 80 41 2 166 244 215 293 5.06e-14 72.8
MsG0080049021.01.T01 AT3G01080 40.609 197 84 3 182 378 163 326 5.08e-40 148
MsG0080049021.01.T01 AT3G01080 62.712 59 21 1 187 244 307 365 6.40e-17 82.8
MsG0080049021.01.T01 AT3G01080 40.609 197 84 3 182 378 201 364 1.06e-39 148
MsG0080049021.01.T01 AT3G01080 62.712 59 21 1 187 244 345 403 6.44e-17 82.8
MsG0080049021.01.T01 AT2G30250 42.791 215 92 6 183 388 163 355 1.03e-37 141
MsG0080049021.01.T01 AT2G30250 56.923 65 27 1 187 250 329 393 2.12e-15 77.8
MsG0080049021.01.T01 AT3G01080 66.216 74 25 0 182 255 201 274 8.03e-30 118
MsG0080049021.01.T01 AT2G04880 35.821 201 111 5 187 378 112 303 1.03e-29 120
MsG0080049021.01.T01 AT2G04880 62.712 59 21 1 187 244 284 342 7.96e-18 85.5
MsG0080049021.01.T01 AT4G30935 36.275 204 103 7 184 378 166 351 1.29e-25 108
MsG0080049021.01.T01 AT4G30935 48.649 74 37 1 187 259 332 405 4.68e-17 83.2
MsG0080049021.01.T01 AT2G04880 65.517 58 20 0 187 244 112 169 5.88e-21 95.1
MsG0080049021.01.T01 AT2G04880 62.712 59 21 1 187 244 308 366 9.35e-18 85.5
MsG0080049021.01.T01 AT2G24570 48.810 84 40 3 177 258 235 317 1.23e-16 80.9
MsG0080049021.01.T01 AT1G29860 51.316 76 36 1 187 261 137 212 2.06e-16 79.7
MsG0080049021.01.T01 AT2G46130 62.500 56 20 1 187 241 31 86 2.23e-16 75.1
MsG0080049021.01.T01 AT5G49520 52.000 75 35 1 187 260 222 296 2.72e-16 80.5
MsG0080049021.01.T01 AT5G13080 57.143 56 23 1 187 241 68 123 3.95e-16 75.5
MsG0080049021.01.T01 AT2G44745 62.500 56 20 1 187 241 146 201 3.97e-16 77.4
MsG0080049021.01.T01 AT4G18170 61.017 59 22 1 187 244 173 231 7.38e-16 78.6
MsG0080049021.01.T01 AT4G31550 45.833 96 41 4 177 270 237 323 1.96e-15 77.4
MsG0080049021.01.T01 AT4G31550 45.833 96 41 4 177 270 238 324 1.98e-15 77.4
MsG0080049021.01.T01 AT4G24240 54.412 68 28 3 177 242 273 339 2.10e-15 77.4
MsG0080049021.01.T01 AT5G46350 55.556 63 27 1 187 248 184 246 3.04e-15 76.6
MsG0080049021.01.T01 AT2G47260 57.627 59 24 1 187 244 175 233 3.39e-15 76.6
MsG0080049021.01.T01 AT1G64000 57.143 56 23 1 187 241 115 170 3.60e-15 74.3
MsG0080049021.01.T01 AT1G69310 60.714 56 21 1 187 241 148 203 3.99e-15 75.9
MsG0080049021.01.T01 AT1G69310 60.714 56 21 1 187 241 148 203 3.99e-15 75.9
MsG0080049021.01.T01 AT1G69310 60.714 56 21 1 187 241 148 203 3.99e-15 75.9
MsG0080049021.01.T01 AT5G26170 55.357 56 24 1 187 241 114 169 5.47e-15 73.2
MsG0080049021.01.T01 AT5G52830 50.000 72 34 2 185 254 164 235 6.46e-15 75.9
MsG0080049021.01.T01 AT5G41570 57.143 56 23 1 187 241 99 154 8.07e-15 72.8
MsG0080049021.01.T01 AT5G43290 52.778 72 33 1 171 241 99 170 8.62e-15 74.7
MsG0080049021.01.T01 AT4G39410 48.611 72 36 1 187 257 224 295 8.66e-15 75.1
MsG0080049021.01.T01 AT1G80840 43.023 86 47 2 187 270 147 232 2.39e-14 73.9
MsG0080049021.01.T01 AT3G62340 55.932 59 25 1 187 244 119 177 3.67e-14 72.8
MsG0080049021.01.T01 AT2G30590 52.055 73 30 4 175 243 301 372 3.83e-14 73.9
MsG0080049021.01.T01 AT2G21900 50.847 59 28 1 187 244 110 168 4.32e-14 71.2
MsG0080049021.01.T01 AT3G04670 52.055 73 30 4 175 243 250 321 6.45e-14 72.8
MsG0080049021.01.T01 AT2G23320 56.140 57 23 2 187 241 241 297 7.82e-14 72.4
MsG0080049021.01.T01 AT1G55600 57.627 59 24 1 187 244 308 366 8.34e-14 73.6
MsG0080049021.01.T01 AT4G01250 46.053 76 39 2 187 260 129 204 1.38e-13 71.6
MsG0080049021.01.T01 AT4G31800 43.056 72 39 2 187 256 112 183 1.43e-13 70.5
MsG0080049021.01.T01 AT1G68150 55.000 60 25 2 187 244 236 295 1.51e-13 72.0
MsG0080049021.01.T01 AT1G29280 52.381 63 28 2 184 244 72 134 1.65e-13 70.5
MsG0080049021.01.T01 AT2G40740 43.590 78 37 3 170 240 154 231 1.70e-13 71.2
MsG0080049021.01.T01 AT3G01970 54.386 57 25 1 187 242 66 122 1.74e-13 68.2
MsG0080049021.01.T01 AT2G40740 44.156 77 36 3 170 239 163 239 2.07e-13 70.9
MsG0080049021.01.T01 AT4G31800 43.056 72 39 2 187 256 177 248 2.11e-13 71.2
MsG0080049021.01.T01 AT5G28650 50.685 73 31 4 175 243 250 321 3.32e-13 70.9
MsG0080049021.01.T01 AT2G25000 49.180 61 29 2 187 245 104 164 1.61e-12 67.0
MsG0080049021.01.T01 AT2G25000 49.180 61 29 2 187 245 104 164 1.61e-12 67.0
MsG0080049021.01.T01 AT4G04450 51.667 60 27 2 187 244 199 258 1.67e-12 69.3
MsG0080049021.01.T01 AT5G15130 50.000 66 30 3 182 244 180 245 2.21e-12 68.9
MsG0080049021.01.T01 AT2G25000 49.180 61 29 2 187 245 126 186 2.39e-12 67.0
MsG0080049021.01.T01 AT5G15130 50.000 66 30 3 182 244 222 287 2.57e-12 68.9
MsG0080049021.01.T01 AT4G04450 51.667 60 27 2 187 244 293 352 2.95e-12 68.9
MsG0080049021.01.T01 AT1G62300 51.667 60 27 2 187 244 313 372 3.29e-12 68.6
MsG0080049021.01.T01 AT4G22070 51.667 60 27 2 187 244 298 357 3.52e-12 68.6
MsG0080049021.01.T01 AT4G22070 51.667 60 27 2 187 244 298 357 3.52e-12 68.6
MsG0080049021.01.T01 AT4G22070 51.667 60 27 2 187 244 298 357 3.52e-12 68.6
MsG0080049021.01.T01 AT4G22070 51.667 60 27 2 187 244 298 357 3.52e-12 68.6
MsG0080049021.01.T01 AT2G25000 49.180 61 29 2 187 245 147 207 3.64e-12 67.0
MsG0080049021.01.T01 AT4G01720 51.667 60 27 2 187 244 240 299 4.56e-12 68.2
MsG0080049021.01.T01 AT4G11070 45.333 75 33 4 184 251 107 180 4.96e-12 66.6
MsG0080049021.01.T01 AT3G58710 50.794 63 29 2 184 244 68 130 5.04e-12 66.6
MsG0080049021.01.T01 AT3G58710 50.794 63 29 2 184 244 69 131 5.10e-12 66.6
MsG0080049021.01.T01 AT4G11070 45.333 75 33 4 184 251 139 212 5.65e-12 66.6
MsG0080049021.01.T01 AT4G23550 45.333 75 39 2 187 259 141 215 6.75e-12 66.6
MsG0080049021.01.T01 AT2G46130 57.143 56 19 2 187 241 31 82 6.78e-12 62.4
MsG0080049021.01.T01 AT5G45260 43.056 72 37 2 187 254 1209 1280 7.08e-12 68.2
MsG0080049021.01.T01 AT2G34830 47.059 68 34 2 187 252 225 292 8.59e-12 67.0
MsG0080049021.01.T01 AT2G34830 47.059 68 34 2 187 252 216 283 8.99e-12 67.0
MsG0080049021.01.T01 AT5G64810 53.448 58 22 2 187 241 111 166 1.33e-11 63.9
MsG0080049021.01.T01 AT1G18860 53.333 60 26 2 187 244 240 299 2.31e-11 65.9
MsG0080049021.01.T01 AT5G24110 46.032 63 30 2 181 239 108 170 2.42e-11 64.7
MsG0080049021.01.T01 AT4G23810 45.902 61 29 2 184 240 156 216 5.24e-11 63.9
MsG0080049021.01.T01 AT5G45050 35.862 145 83 6 141 280 1135 1274 6.22e-11 65.1
MsG0080049021.01.T01 AT5G45050 35.862 145 83 6 141 280 1107 1246 6.53e-11 65.1
MsG0080049021.01.T01 AT1G30650 45.588 68 35 2 187 252 218 285 6.59e-11 64.3
MsG0080049021.01.T01 AT5G45050 35.862 145 83 6 141 280 996 1135 6.99e-11 65.1
MsG0080049021.01.T01 AT1G69810 41.096 73 40 2 187 256 204 276 8.22e-11 63.9
MsG0080049021.01.T01 AT1G69810 41.096 73 40 2 187 256 146 218 8.52e-11 63.5

Find 92 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCTATGTACTCGATATTT+TGG 0.071036 contig614end:+28 None:intergenic
GGCTTTCGCTGGAGGAAATA+TGG 0.218614 contig614end:-185 MsG0080049021.01.T01:CDS
GGCTTGAACCTCACTGTCTT+TGG 0.252094 contig614end:+2517 None:intergenic
GGATATAACTGGAGAAAATA+TGG 0.302862 contig614end:-1210 MsG0080049021.01.T01:CDS
ATTGCAGAAATTGTTTATAA+AGG 0.309738 contig614end:-1084 MsG0080049021.01.T01:CDS
GATTGATTGGTGTCAGGTTT+CGG 0.333771 contig614end:+2249 None:intergenic
TATGGACAGAAGCAAGTAAA+AGG 0.334183 contig614end:-1192 MsG0080049021.01.T01:CDS
CCTCACTGTCTTTGGCCTAA+TGG 0.341358 contig614end:+2525 None:intergenic
AAAAGTATAAACCTGGGATA+TGG 0.347198 contig614end:+140 None:intergenic
TTGCCAAGCCAGTTGCTTCA+AGG 0.351731 contig614end:-2642 MsG0080049021.01.T01:CDS
GAATGGTTCAAGATAAAGTA+TGG 0.369467 contig614end:-990 MsG0080049021.01.T01:CDS
CGAAACTCGGGAGCAACATC+AGG 0.390734 contig614end:-1027 MsG0080049021.01.T01:CDS
CCTTCCTACAGAAACGTATC+AGG 0.400723 contig614end:-1325 MsG0080049021.01.T01:CDS
CTTCGTATGATGGATATAAC+TGG 0.406141 contig614end:-1221 MsG0080049021.01.T01:CDS
GTAGTTTGAGAAGATGCAAT+TGG 0.426919 contig614end:+2556 None:intergenic
AAAATTCTTGTGGTCTAAGC+GGG 0.435521 contig614end:-882 MsG0080049021.01.T01:CDS
TTTGTAAATAAGAGATTGAT+TGG 0.448465 contig614end:+2236 None:intergenic
ATAAGAGATTGATTGGTGTC+AGG 0.450643 contig614end:+2243 None:intergenic
AAACTACAATATCCGCCATT+AGG 0.452468 contig614end:-2540 MsG0080049021.01.T01:CDS
TCCTTGGAGATGGCTTTCGC+TGG 0.465481 contig614end:-196 MsG0080049021.01.T01:CDS
GCTGATAGACCTTCGTATGA+TGG 0.469002 contig614end:-1231 MsG0080049021.01.T01:CDS
GAACTTTGCATTACAATGCC+TGG 0.474338 contig614end:+233 None:intergenic
CAAGTAGGCCTTGAAGCAAC+TGG 0.479919 contig614end:+2634 None:intergenic
AATCAGAATGAAAGGAATGA+AGG 0.486904 contig614end:-955 MsG0080049021.01.T01:CDS
GGAAGGAAGCAAAGGATTTG+AGG 0.487549 contig614end:-851 MsG0080049021.01.T01:CDS
AGAAGATGCAATTGGAGGAG+TGG 0.488432 contig614end:+2564 None:intergenic
AAAGTTGAAAGATCATTAGA+TGG 0.489403 contig614end:-1111 MsG0080049021.01.T01:CDS
AGGTCTATCAGCATTATTTG+TGG 0.494075 contig614end:+1242 None:intergenic
ATATGGGCAGAAGGTGGTGA+AGG 0.494098 contig614end:-168 MsG0080049021.01.T01:CDS
ACAAACAACTGTCTCTCTCT+TGG 0.497528 contig614end:-2193 MsG0080049021.01.T01:CDS
TTTGATGTTGTGGCTTTCCA+TGG 0.497803 contig614end:+1052 None:intergenic
CACTGAATGTTCACCTGAGG+AGG 0.503368 contig614end:+2478 None:intergenic
GCTTTCGCTGGAGGAAATAT+GGG 0.508332 contig614end:-184 MsG0080049021.01.T01:CDS
GTGCACTTGTAGTAACTTCG+AGG 0.512042 contig614end:+1159 None:intergenic
ATGGTTAAGATGCTGAGGAT+TGG 0.515917 contig614end:+1395 None:intergenic
TGAATGTTCACCTGAGGAGG+GGG 0.516339 contig614end:+2481 None:intergenic
GATTCTGAAGTCCTTGGAGA+TGG 0.520543 contig614end:-206 MsG0080049021.01.T01:CDS
AGGGATGATTTCTGATGGAA+TGG 0.520627 contig614end:-1007 MsG0080049021.01.T01:CDS
CAACATCAAAAGCGAAACTC+GGG 0.521198 contig614end:-1039 MsG0080049021.01.T01:CDS
TGTCTCTCTCTTGGCAAACA+TGG 0.522546 contig614end:-2184 MsG0080049021.01.T01:intron
CCTGATACGTTTCTGTAGGA+AGG 0.526386 contig614end:+1325 None:intergenic
TCTTTCTCAGAGCTTCTAGC+AGG 0.531332 contig614end:-2598 MsG0080049021.01.T01:CDS
GAGGAAGGTCTAGTAGAGCC+AGG 0.532617 contig614end:-251 MsG0080049021.01.T01:CDS
GTTTGAGAAGATGCAATTGG+AGG 0.534896 contig614end:+2559 None:intergenic
CATTGTAATGCAAAGTTCTG+TGG 0.543269 contig614end:-228 MsG0080049021.01.T01:CDS
GAAGAAGAAAAGTATAAACC+TGG 0.544217 contig614end:+133 None:intergenic
AGGCCTTGAAGCAACTGGCT+TGG 0.544517 contig614end:+2639 None:intergenic
TCTGTGGATTCTGAAGTCCT+TGG 0.545629 contig614end:-212 MsG0080049021.01.T01:CDS
ACAACATCAAAAGCGAAACT+CGG 0.546405 contig614end:-1040 MsG0080049021.01.T01:CDS
TGGTCCTCCTCCATGTTCTG+TGG 0.546595 contig614end:+1279 None:intergenic
ATAATAGTAATCAGAATGAA+AGG 0.547394 contig614end:-963 MsG0080049021.01.T01:CDS
CTGAATGTTCACCTGAGGAG+GGG 0.547589 contig614end:+2480 None:intergenic
TGAGAATCAATCAAATGAAG+TGG 0.547618 contig614end:-282 MsG0080049021.01.T01:CDS
TTGGAGATGGCTTTCGCTGG+AGG 0.549285 contig614end:-193 MsG0080049021.01.T01:CDS
ATCTCTTATTTACAAACCAA+TGG 0.553401 contig614end:-2229 MsG0080049021.01.T01:CDS
TTCTAAATTCTGCTATGCAT+CGG 0.558444 contig614end:-52 MsG0080049021.01.T01:CDS
GTGGCCTGATACGTTTCTGT+AGG 0.559252 contig614end:+1321 None:intergenic
TACGATGGCACCACAGAACA+TGG 0.559539 contig614end:-1289 MsG0080049021.01.T01:CDS
CTATCAGCATTATTTGTGGA+TGG 0.565274 contig614end:+1246 None:intergenic
GAAAATTCTTGTGGTCTAAG+CGG 0.570972 contig614end:-883 MsG0080049021.01.T01:CDS
TTTGCTCTAGAAAATTCTTG+TGG 0.572340 contig614end:-892 MsG0080049021.01.T01:CDS
ACTTAGTAGTTCTTCTGACA+TGG 0.572596 contig614end:-2274 MsG0080049021.01.T01:CDS
AAGCAAAGGATTTGAGGCAG+AGG 0.578305 contig614end:-845 MsG0080049021.01.T01:CDS
AAATGAAGTGGCAGTATCAG+AGG 0.580061 contig614end:-270 MsG0080049021.01.T01:CDS
CTGATACGTTTCTGTAGGAA+GGG 0.588219 contig614end:+1326 None:intergenic
ATGACCATAGAAGTAAAAGA+AGG 0.588802 contig614end:-819 MsG0080049021.01.T01:intron
ACATCAGGGATGATTTCTGA+TGG 0.589821 contig614end:-1012 MsG0080049021.01.T01:CDS
ACTGAATGTTCACCTGAGGA+GGG 0.601339 contig614end:+2479 None:intergenic
TGGTCTAAGCGGGGAATGTG+AGG 0.601736 contig614end:-872 MsG0080049021.01.T01:CDS
TCAAGATTACTTATACAGCA+AGG 0.602283 contig614end:-75 MsG0080049021.01.T01:CDS
CTGGAGGAAATATGGGCAGA+AGG 0.603595 contig614end:-177 MsG0080049021.01.T01:CDS
GGCCACAGAATCTTGTACGA+TGG 0.604701 contig614end:-1304 MsG0080049021.01.T01:CDS
TGAAGGGAAATCCATATCCC+AGG 0.606812 contig614end:-151 MsG0080049021.01.T01:CDS
CACTGTCTTTGGCCTAATGG+CGG 0.608617 contig614end:+2528 None:intergenic
CTAAGCGGGGAATGTGAGGA+AGG 0.611933 contig614end:-868 MsG0080049021.01.T01:CDS
TATGGGCAGAAGGTGGTGAA+GGG 0.615897 contig614end:-167 MsG0080049021.01.T01:CDS
TGCCATCGTACAAGATTCTG+TGG 0.625393 contig614end:+1302 None:intergenic
GGCACCACAGAACATGGAGG+AGG 0.626068 contig614end:-1283 MsG0080049021.01.T01:CDS
AAGAAGAAAAGTATAAACCT+GGG 0.626787 contig614end:+134 None:intergenic
TATAAAGGTGAGCACAACCA+TGG 0.627504 contig614end:-1069 MsG0080049021.01.T01:CDS
TCCAGCGAAAGCCATCTCCA+AGG 0.633371 contig614end:+195 None:intergenic
GAAACTCGGGAGCAACATCA+GGG 0.638327 contig614end:-1026 MsG0080049021.01.T01:CDS
GAATGTGAGGAAGGAAGCAA+AGG 0.644540 contig614end:-859 MsG0080049021.01.T01:CDS
GAAGTGGCAGTATCAGAGGA+AGG 0.656528 contig614end:-266 MsG0080049021.01.T01:CDS
GCCCAAAATATCGAGTACAT+AGG 0.656557 contig614end:-30 None:intergenic
GAGGAAATATGGGCAGAAGG+TGG 0.666250 contig614end:-174 MsG0080049021.01.T01:CDS
GAATGTTCACCTGAGGAGGG+GGG 0.676446 contig614end:+2482 None:intergenic
AAATTCTTGTGGTCTAAGCG+GGG 0.685313 contig614end:-881 MsG0080049021.01.T01:CDS
CAGTTATATCCATCATACGA+AGG 0.693969 contig614end:+1222 None:intergenic
GATTTGTAAGAAGAACAAGT+AGG 0.708140 contig614end:+2619 None:intergenic
CCATTAGGCCAAAGACAGTG+AGG 0.725022 contig614end:-2525 MsG0080049021.01.T01:CDS
GATGGCACCACAGAACATGG+AGG 0.771341 contig614end:-1286 MsG0080049021.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATTAGAATTTTTTTATT+GGG - contig614end:1105-1124 MsG0080049021.01.T01:CDS 10.0%
!!! CATGATAAATTTTTAATTAA+AGG - contig614end:2364-2383 MsG0080049021.01.T01:intron 10.0%
!!! GATTTTTAATTTTAATTCAT+TGG - contig614end:2243-2262 MsG0080049021.01.T01:CDS 10.0%
!! AAGAATAACATTATAAATGA+CGG - contig614end:778-797 MsG0080049021.01.T01:intron 15.0%
!!! AACAAGTTTTCATTTTTTTT+TGG - contig614end:2154-2173 MsG0080049021.01.T01:intron 15.0%
!!! GACTATTAGAATTTTTTTAT+TGG - contig614end:1104-1123 MsG0080049021.01.T01:CDS 15.0%
!!! GTTTCTTTTTATTTATTTTC+AGG + contig614end:1938-1957 None:intergenic 15.0%
!! ACAAAAATGATTACAAATGA+AGG + contig614end:661-680 None:intergenic 20.0%
!! ACAAATGAAGGATTATATAT+AGG + contig614end:649-668 None:intergenic 20.0%
!! ATAATAGTAATCAGAATGAA+AGG - contig614end:1744-1763 MsG0080049021.01.T01:intron 20.0%
!! ATTGCAGAAATTGTTTATAA+AGG - contig614end:1623-1642 MsG0080049021.01.T01:intron 20.0%
!! GTAACATATTAGTGATTATA+AGG - contig614end:2325-2344 MsG0080049021.01.T01:intron 20.0%
!! TATTTGTGACATAATTTCTT+CGG - contig614end:2267-2286 MsG0080049021.01.T01:CDS 20.0%
!! TTAAAAGTTTCTCATTCTTT+AGG - contig614end:2397-2416 MsG0080049021.01.T01:intron 20.0%
!! TTTGTAAATAAGAGATTGAT+TGG + contig614end:474-493 None:intergenic 20.0%
!!! ATATAGCGGATAATTTATTT+TGG + contig614end:1074-1093 None:intergenic 20.0%
!!! TAGCTTAGTTAGTTTTATTT+CGG - contig614end:597-616 MsG0080049021.01.T01:intron 20.0%
!!! TGAAATTAGTTTATAAAGAG+AGG + contig614end:1173-1192 None:intergenic 20.0%
! AAAGTTGAAAGATCATTAGA+TGG - contig614end:1596-1615 MsG0080049021.01.T01:intron 25.0%
! AACTCATATCATTGATCAAT+TGG + contig614end:688-707 None:intergenic 25.0%
! ATCACTAATATGTTACTGTA+TGG + contig614end:2321-2340 None:intergenic 25.0%
! ATTTGCAATGTTTCAAAAAC+TGG - contig614end:2034-2053 MsG0080049021.01.T01:intron 25.0%
! CAATGTTTAGAAAACCAAAT+CGG + contig614end:342-361 None:intergenic 25.0%
!! AAGAAGAAAAGTATAAACCT+GGG + contig614end:2576-2595 None:intergenic 25.0%
!! ATAACCTTCTTTTACTTCTA+TGG + contig614end:1895-1914 None:intergenic 25.0%
!! ATCTCTTATTTACAAACCAA+TGG - contig614end:478-497 MsG0080049021.01.T01:intron 25.0%
!! CTTTACAAGTTCTTTTTGTA+AGG + contig614end:1141-1160 None:intergenic 25.0%
!! CTTTCAACTTTCTTTTTAAC+TGG + contig614end:1587-1606 None:intergenic 25.0%
!!! AGCAATATAGTGTTTTGAAA+TGG - contig614end:737-756 MsG0080049021.01.T01:intron 25.0%
!!! TACTGTTTTGAAATGCTTAT+CGG - contig614end:365-384 MsG0080049021.01.T01:intron 25.0%
!!! TTCTTTTTAACTGGACAATT+AGG + contig614end:1578-1597 None:intergenic 25.0%
!!! TTTTCTAGAGCAAAATCATT+AGG + contig614end:1809-1828 None:intergenic 25.0%
AAAAGAACTTGTAAAGTGAG+AGG - contig614end:1145-1164 MsG0080049021.01.T01:CDS 30.0%
AATCAGAATGAAAGGAATGA+AGG - contig614end:1752-1771 MsG0080049021.01.T01:intron 30.0%
AGTCACTAACACAAATATAG+CGG + contig614end:1088-1107 None:intergenic 30.0%
ATGAACAACATTTGTAAGTG+AGG - contig614end:976-995 MsG0080049021.01.T01:CDS 30.0%
ATGACCATAGAAGTAAAAGA+AGG - contig614end:1888-1907 MsG0080049021.01.T01:intron 30.0%
CTAGCTTATAGAGTTAAGTT+AGG - contig614end:819-838 MsG0080049021.01.T01:intron 30.0%
GAATGGTTCAAGATAAAGTA+TGG - contig614end:1717-1736 MsG0080049021.01.T01:intron 30.0%
GATTTGTAAGAAGAACAAGT+AGG + contig614end:91-110 None:intergenic 30.0%
GGATATAACTGGAGAAAATA+TGG - contig614end:1497-1516 MsG0080049021.01.T01:intron 30.0%
TCAAGATTACTTATACAGCA+AGG - contig614end:2632-2651 MsG0080049021.01.T01:CDS 30.0%
TGAACAACATTTGTAAGTGA+GGG - contig614end:977-996 MsG0080049021.01.T01:CDS 30.0%
TGAGAATCAATCAAATGAAG+TGG - contig614end:2425-2444 MsG0080049021.01.T01:intron 30.0%
TGGAAAACTCTGTTAGAATT+TGG + contig614end:1054-1073 None:intergenic 30.0%
TTCTAAATTCTGCTATGCAT+CGG - contig614end:2655-2674 MsG0080049021.01.T01:CDS 30.0%
TTTACATTCCTAAACATCTG+CGG + contig614end:900-919 None:intergenic 30.0%
! AAAAGTATAAACCTGGGATA+TGG + contig614end:2570-2589 None:intergenic 30.0%
! GAAGAAGAAAAGTATAAACC+TGG + contig614end:2577-2596 None:intergenic 30.0%
! GTTGTGTTATTACCAATTAC+AGG - contig614end:400-419 MsG0080049021.01.T01:intron 30.0%
! TACCTCTTTTTGTCTTCTTT+TGG - contig614end:1238-1257 MsG0080049021.01.T01:CDS 30.0%
! TCTTTTTGTAAGGTTGAGTA+AGG + contig614end:1131-1150 None:intergenic 30.0%
!! ACTCTGTTAGAATTTGGTTT+TGG + contig614end:1048-1067 None:intergenic 30.0%
!! TCTCTTTTCAATTTGAGACT+TGG - contig614end:1200-1219 MsG0080049021.01.T01:CDS 30.0%
!! TTTGCTCTAGAAAATTCTTG+TGG - contig614end:1815-1834 MsG0080049021.01.T01:intron 30.0%
!! TTTTGTCTTCTTTTGGAGAA+GGG - contig614end:1245-1264 MsG0080049021.01.T01:CDS 30.0%
!! TTTTTGTCTTCTTTTGGAGA+AGG - contig614end:1244-1263 MsG0080049021.01.T01:CDS 30.0%
!!! GTTTTTAAAACGCTGCATTA+TGG + contig614end:262-281 None:intergenic 30.0%
!!! TGTTAGCTCTAAAGTTTTCA+TGG + contig614end:1334-1353 None:intergenic 30.0%
AAAATTCTTGTGGTCTAAGC+GGG - contig614end:1825-1844 MsG0080049021.01.T01:intron 35.0%
AAACTACAATATCCGCCATT+AGG - contig614end:167-186 MsG0080049021.01.T01:CDS 35.0%
ACAACATCAAAAGCGAAACT+CGG - contig614end:1667-1686 MsG0080049021.01.T01:intron 35.0%
ACAGAGAAGAAAAACACACT+AGG - contig614end:1956-1975 MsG0080049021.01.T01:intron 35.0%
ACTTAGTAGTTCTTCTGACA+TGG - contig614end:433-452 MsG0080049021.01.T01:intron 35.0%
AGGTCTATCAGCATTATTTG+TGG + contig614end:1468-1487 None:intergenic 35.0%
ATCAGTTGGAACTTTCAGTT+CGG + contig614end:284-303 None:intergenic 35.0%
CAGTTATATCCATCATACGA+AGG + contig614end:1488-1507 None:intergenic 35.0%
CATTGTAATGCAAAGTTCTG+TGG - contig614end:2479-2498 MsG0080049021.01.T01:intron 35.0%
CTATCAGCATTATTTGTGGA+TGG + contig614end:1464-1483 None:intergenic 35.0%
CTCCAAAAGAAGACAAAAAG+AGG + contig614end:1243-1262 None:intergenic 35.0%
GAAAATTCTTGTGGTCTAAG+CGG - contig614end:1824-1843 MsG0080049021.01.T01:intron 35.0%
GAACAACATTTGTAAGTGAG+GGG - contig614end:978-997 MsG0080049021.01.T01:CDS 35.0%
GCAACAACCACAAAAATCAA+TGG - contig614end:1286-1305 MsG0080049021.01.T01:CDS 35.0%
GTAGTTTGAGAAGATGCAAT+TGG + contig614end:154-173 None:intergenic 35.0%
TATGGACAGAAGCAAGTAAA+AGG - contig614end:1515-1534 MsG0080049021.01.T01:intron 35.0%
TCAATGAAACATCCGAATCA+TGG + contig614end:2208-2227 None:intergenic 35.0%
TTACATTCCTAAACATCTGC+GGG + contig614end:899-918 None:intergenic 35.0%
! ATAAGAGATTGATTGGTGTC+AGG + contig614end:467-486 None:intergenic 35.0%
! GTGCAATATTAGCCTGTAAT+TGG + contig614end:415-434 None:intergenic 35.0%
! TGGTCGAACAAATCTAAGAT+AGG + contig614end:876-895 None:intergenic 35.0%
! TGTGACACAAATTTTGCCAT+TGG + contig614end:497-516 None:intergenic 35.0%
! TTTTCATGGTTAAGATGCTG+AGG + contig614end:1320-1339 None:intergenic 35.0%
!! CTTCGTATGATGGATATAAC+TGG - contig614end:1486-1505 MsG0080049021.01.T01:intron 35.0%
!! TTGTGGATGGTAATGCTTTT+TGG + contig614end:1451-1470 None:intergenic 35.0%
!!! TTGGTCTCCATTGATTTTTG+TGG + contig614end:1296-1315 None:intergenic 35.0%
AAATGAAGTGGCAGTATCAG+AGG - contig614end:2437-2456 MsG0080049021.01.T01:intron 40.0%
AAATTCTTGTGGTCTAAGCG+GGG - contig614end:1826-1845 MsG0080049021.01.T01:intron 40.0%
AACCAAATCGGACATCAAAC+CGG + contig614end:330-349 None:intergenic 40.0%
AACGAAACCAATCAACGAAC+TGG + contig614end:2090-2109 None:intergenic 40.0%
ACAAACAACTGTCTCTCTCT+TGG - contig614end:514-533 MsG0080049021.01.T01:intron 40.0%
ACATCAGGGATGATTTCTGA+TGG - contig614end:1695-1714 MsG0080049021.01.T01:intron 40.0%
AGGGATGATTTCTGATGGAA+TGG - contig614end:1700-1719 MsG0080049021.01.T01:intron 40.0%
ATGGTTAAGATGCTGAGGAT+TGG + contig614end:1315-1334 None:intergenic 40.0%
CAAACTCCGAAGTTAGCTAA+CGG + contig614end:1017-1036 None:intergenic 40.0%
CAACATCAAAAGCGAAACTC+GGG - contig614end:1668-1687 MsG0080049021.01.T01:intron 40.0%
CAACCAGACTATAGTATACC+CGG + contig614end:2113-2132 None:intergenic 40.0%
CATCCAGTTCAACCATGATT+CGG - contig614end:2193-2212 MsG0080049021.01.T01:CDS 40.0%
CTGATACGTTTCTGTAGGAA+GGG + contig614end:1384-1403 None:intergenic 40.0%
GAACTTTGCATTACAATGCC+TGG + contig614end:2477-2496 None:intergenic 40.0%
GAAGTTAGCTAACGGAATGA+CGG + contig614end:1009-1028 None:intergenic 40.0%
GTCATTCCGTTAGCTAACTT+CGG - contig614end:1008-1027 MsG0080049021.01.T01:CDS 40.0%
GTTTGAGAAGATGCAATTGG+AGG + contig614end:151-170 None:intergenic 40.0%
TATAAAGGTGAGCACAACCA+TGG - contig614end:1638-1657 MsG0080049021.01.T01:intron 40.0%
TTTGATGTTGTGGCTTTCCA+TGG + contig614end:1658-1677 None:intergenic 40.0%
!! GAGTTTCGCTTTTGATGTTG+TGG + contig614end:1668-1687 None:intergenic 40.0%
!! GATTGATTGGTGTCAGGTTT+CGG + contig614end:461-480 None:intergenic 40.0%
!! TTCGTTGATTGGTTTCGTTC+CGG - contig614end:2091-2110 MsG0080049021.01.T01:intron 40.0%
AAACCAATCAACGAACTGGC+TGG + contig614end:2086-2105 None:intergenic 45.0%
ACTGAATGTTCACCTGAGGA+GGG + contig614end:231-250 None:intergenic 45.0%
AGAAGATGCAATTGGAGGAG+TGG + contig614end:146-165 None:intergenic 45.0%
CATCCGAATCATGGTTGAAC+TGG + contig614end:2199-2218 None:intergenic 45.0%
CCTGATACGTTTCTGTAGGA+AGG + contig614end:1385-1404 None:intergenic 45.0%
CCTTCCTACAGAAACGTATC+AGG - contig614end:1382-1401 MsG0080049021.01.T01:CDS 45.0%
GAATGTGAGGAAGGAAGCAA+AGG - contig614end:1848-1867 MsG0080049021.01.T01:intron 45.0%
GCTGATAGACCTTCGTATGA+TGG - contig614end:1476-1495 MsG0080049021.01.T01:intron 45.0%
GCTTTCGCTGGAGGAAATAT+GGG - contig614end:2523-2542 MsG0080049021.01.T01:CDS 45.0%
GGAAGGAAGCAAAGGATTTG+AGG - contig614end:1856-1875 MsG0080049021.01.T01:intron 45.0%
GTGCACTTGTAGTAACTTCG+AGG + contig614end:1551-1570 None:intergenic 45.0%
GTTCCGGGTATACTATAGTC+TGG - contig614end:2107-2126 MsG0080049021.01.T01:intron 45.0%
TCTTTCTCAGAGCTTCTAGC+AGG - contig614end:109-128 MsG0080049021.01.T01:CDS 45.0%
TGAAGGGAAATCCATATCCC+AGG - contig614end:2556-2575 MsG0080049021.01.T01:CDS 45.0%
TGCCATCGTACAAGATTCTG+TGG + contig614end:1408-1427 None:intergenic 45.0%
TGGGTCAAGGTTCAATCAGT+TGG + contig614end:298-317 None:intergenic 45.0%
TGTCTCTCTCTTGGCAAACA+TGG - contig614end:523-542 MsG0080049021.01.T01:intron 45.0%
TTGCACTGAATGTTCACCTG+AGG + contig614end:235-254 None:intergenic 45.0%
! AAGCAAAGGATTTGAGGCAG+AGG - contig614end:1862-1881 MsG0080049021.01.T01:intron 45.0%
! CACGGTTGAAGCTGTCTTTT+TGG + contig614end:2061-2080 None:intergenic 45.0%
! GCTTTGGACATGAGCACAAT+TGG - contig614end:940-959 MsG0080049021.01.T01:CDS 45.0%
!! GATTCTGAAGTCCTTGGAGA+TGG - contig614end:2501-2520 MsG0080049021.01.T01:CDS 45.0%
!! TCGTTGATTGGTTTCGTTCC+GGG - contig614end:2092-2111 MsG0080049021.01.T01:intron 45.0%
!! TCTGTGGATTCTGAAGTCCT+TGG - contig614end:2495-2514 MsG0080049021.01.T01:CDS 45.0%
!! AATGAATTAAAATTAAAAAT+CGG + contig614end:2244-2263 None:intergenic 5.0%
ACACTCCAGATGTCGTGCTT+TGG - contig614end:924-943 MsG0080049021.01.T01:CDS 50.0%
ATATGGGCAGAAGGTGGTGA+AGG - contig614end:2539-2558 MsG0080049021.01.T01:CDS 50.0%
ATCAAACCGGTGTGACCTCT+GGG + contig614end:317-336 None:intergenic 50.0%
CAAGTAGGCCTTGAAGCAAC+TGG + contig614end:76-95 None:intergenic 50.0%
CACTGAATGTTCACCTGAGG+AGG + contig614end:232-251 None:intergenic 50.0%
CACTGTCTTTGGCCTAATGG+CGG + contig614end:182-201 None:intergenic 50.0%
CATGTCCAAAGCACGACATC+TGG + contig614end:932-951 None:intergenic 50.0%
CATTCCTAAACATCTGCGGG+TGG + contig614end:896-915 None:intergenic 50.0%
CCATTAGGCCAAAGACAGTG+AGG - contig614end:182-201 MsG0080049021.01.T01:CDS 50.0%
CCTCACTGTCTTTGGCCTAA+TGG + contig614end:185-204 None:intergenic 50.0%
CTGAATGTTCACCTGAGGAG+GGG + contig614end:230-249 None:intergenic 50.0%
CTGATTGAACCTTGACCCAG+AGG - contig614end:299-318 MsG0080049021.01.T01:intron 50.0%
CTGGAGGAAATATGGGCAGA+AGG - contig614end:2530-2549 MsG0080049021.01.T01:CDS 50.0%
GAAACTCGGGAGCAACATCA+GGG - contig614end:1681-1700 MsG0080049021.01.T01:intron 50.0%
GAACCAGCCAGTTCGTTGAT+TGG - contig614end:2080-2099 MsG0080049021.01.T01:intron 50.0%
GAAGTGGCAGTATCAGAGGA+AGG - contig614end:2441-2460 MsG0080049021.01.T01:intron 50.0%
GAGGAAATATGGGCAGAAGG+TGG - contig614end:2533-2552 MsG0080049021.01.T01:CDS 50.0%
GGCCACAGAATCTTGTACGA+TGG - contig614end:1403-1422 MsG0080049021.01.T01:CDS 50.0%
GGCTTGAACCTCACTGTCTT+TGG + contig614end:193-212 None:intergenic 50.0%
GGCTTTCGCTGGAGGAAATA+TGG - contig614end:2522-2541 MsG0080049021.01.T01:CDS 50.0%
GTGGCCTGATACGTTTCTGT+AGG + contig614end:1389-1408 None:intergenic 50.0%
TACGATGGCACCACAGAACA+TGG - contig614end:1418-1437 MsG0080049021.01.T01:CDS 50.0%
TATGGGCAGAAGGTGGTGAA+GGG - contig614end:2540-2559 MsG0080049021.01.T01:CDS 50.0%
TGAATGTTCACCTGAGGAGG+GGG + contig614end:229-248 None:intergenic 50.0%
TTGCCAAGCCAGTTGCTTCA+AGG - contig614end:65-84 MsG0080049021.01.T01:CDS 50.0%
! TCAACGAACTGGCTGGTTCA+CGG + contig614end:2079-2098 None:intergenic 50.0%
!! CACCGGTTTGATGTCCGATT+TGG - contig614end:325-344 MsG0080049021.01.T01:intron 50.0%
AATGAATCTCCCCCCTCCTC+AGG - contig614end:216-235 MsG0080049021.01.T01:CDS 55.0%
AGGCCTTGAAGCAACTGGCT+TGG + contig614end:71-90 None:intergenic 55.0%
CATCAAACCGGTGTGACCTC+TGG + contig614end:318-337 None:intergenic 55.0%
CGAAACTCGGGAGCAACATC+AGG - contig614end:1680-1699 MsG0080049021.01.T01:intron 55.0%
CTAAGCGGGGAATGTGAGGA+AGG - contig614end:1839-1858 MsG0080049021.01.T01:intron 55.0%
GAATGTTCACCTGAGGAGGG+GGG + contig614end:228-247 None:intergenic 55.0%
GAGGAAGGTCTAGTAGAGCC+AGG - contig614end:2456-2475 MsG0080049021.01.T01:intron 55.0%
GATGGCACCACAGAACATGG+AGG - contig614end:1421-1440 MsG0080049021.01.T01:CDS 55.0%
TCCAGCGAAAGCCATCTCCA+AGG + contig614end:2515-2534 None:intergenic 55.0%
TCCTTGGAGATGGCTTTCGC+TGG - contig614end:2511-2530 MsG0080049021.01.T01:CDS 55.0%
TCGACCACCCGCAGATGTTT+AGG - contig614end:889-908 MsG0080049021.01.T01:CDS 55.0%
TGGTCCTCCTCCATGTTCTG+TGG + contig614end:1431-1450 None:intergenic 55.0%
TGGTCTAAGCGGGGAATGTG+AGG - contig614end:1835-1854 MsG0080049021.01.T01:intron 55.0%
TTGGAGATGGCTTTCGCTGG+AGG - contig614end:2514-2533 MsG0080049021.01.T01:CDS 55.0%
CCTTGACCCAGAGGTCACAC+CGG - contig614end:308-327 MsG0080049021.01.T01:intron 60.0%
GGAGGGGGGAGATTCATTGC+TGG + contig614end:214-233 None:intergenic 60.0%
GGCACCACAGAACATGGAGG+AGG - contig614end:1424-1443 MsG0080049021.01.T01:CDS 60.0%
CCGGTGTGACCTCTGGGTCA+AGG + contig614end:311-330 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
contig614end gene 31 2698 31 ID=MsG0080049021.01;Name=MsG0080049021.01
contig614end mRNA 31 2698 31 ID=MsG0080049021.01.T01;Parent=MsG0080049021.01;Name=MsG0080049021.01.T01;_AED=0.36;_eAED=0.41;_QI=0|0|0|1|1|1|4|0|417
contig614end exon 2492 2698 2492 ID=MsG0080049021.01.T01:exon:17514;Parent=MsG0080049021.01.T01
contig614end exon 2185 2307 2185 ID=MsG0080049021.01.T01:exon:17513;Parent=MsG0080049021.01.T01
contig614end exon 820 1463 820 ID=MsG0080049021.01.T01:exon:17512;Parent=MsG0080049021.01.T01
contig614end exon 31 310 31 ID=MsG0080049021.01.T01:exon:17511;Parent=MsG0080049021.01.T01
contig614end CDS 2492 2698 2492 ID=MsG0080049021.01.T01:cds;Parent=MsG0080049021.01.T01
contig614end CDS 2185 2307 2185 ID=MsG0080049021.01.T01:cds;Parent=MsG0080049021.01.T01
contig614end CDS 820 1463 820 ID=MsG0080049021.01.T01:cds;Parent=MsG0080049021.01.T01
contig614end CDS 31 310 31 ID=MsG0080049021.01.T01:cds;Parent=MsG0080049021.01.T01
Gene Sequence

>MsG0080049021.01.T01

ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAGCCAGTTGCTTCAAGGCCTACTTGTTCTTCTTACAAATCTTTCTCAGAGCTTCTAGCAGGTGCAATCAACTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAATGAATCTCCCCCCTCCTCAGGCTAATATTGCACTTAGTAGTTCTTCTGACATGGATCCGAAACCTGACACCAATCAATCTCTTATTTACAAACCAATGGCAAAATTTGTGTCACAAACAACTGTCTCTCTCTTGGCAAACATGGGAATTTGCAGTACTAATCAGCAACAACCACAAAAATCAATGGAGACCAATCCTCAGCATCTTAACCATGAAAACTTTAGAGCTAACACGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACGTATCAGGCCACAGAATCTTGTACGATGGCACCACAGAACATGGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCGTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTACTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAGCACAACCATGGAAAGCCACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGGATGATTTCTGATGGAATGGTTCAAGATAAAGTATGGAGTAATAATAGTAATCAGAATGAAAGGAATGAAGGAAGAATAGAGAATAAAGTCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCTTGTGGTCTAAGCGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACCATAGAAGTAAAAGAAGGAAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTCTAGTAGAGCCAGGCATTGTAATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGGTTTATACTTTTCTTCTTCAAAGTAACTTTTATAAATGAGCTGTTTCAAGATTTTCAAGATTACTTATACAGCAAGGTTCTAAATTCTGCTATGCATCGGCCCAAAATATCGAGTACATAG
Protein sequence

>MsG0080049021.01.T01

MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVRFKPAMNLPPPQANIALSSSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTNQQQPQKSMETNPQHLNHENFRANTSSKLHQNITLPTETYQATESCTMAPQNMEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKPQHQKRNSGATSGMISDGMVQDKVWSNNSNQNERNEGRIENKVKASQPNDFALENSCGLSGECEEGSKGFEAEEDDHRSKRRKNENQSNEVAVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRFILFFFKVTFINELFQDFQDYLYSKVLNSAMHRPKISST*