AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000805.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000805.01.T01 MTR_1g008140 98.689 610 7 1 1 610 1 609 0.0 1252
MsG0180000805.01.T01 MTR_3g091380 70.049 611 170 6 1 610 1 599 0.0 888
MsG0180000805.01.T01 MTR_7g108905 43.728 574 291 8 44 609 8 557 4.55e-165 483
MsG0180000805.01.T01 MTR_8g023310 43.147 591 302 10 35 608 16 589 5.65e-160 471
MsG0180000805.01.T01 MTR_7g050870 48.262 489 216 9 125 608 98 554 2.49e-158 466
MsG0180000805.01.T01 MTR_7g050980 46.771 511 235 10 104 608 76 555 1.63e-156 461
MsG0180000805.01.T01 MTR_2g044880 45.421 535 247 12 74 608 36 525 6.00e-153 451
MsG0180000805.01.T01 MTR_7g050950 47.639 487 221 11 125 608 98 553 8.39e-153 451
MsG0180000805.01.T01 MTR_4g087980 48.498 466 208 8 144 608 82 516 2.91e-150 444
MsG0180000805.01.T01 MTR_7g112580 48.203 473 213 8 141 609 99 543 3.64e-147 436
MsG0180000805.01.T01 MTR_3g010780 42.857 560 290 10 53 608 41 574 7.06e-147 437
MsG0180000805.01.T01 MTR_4g025690 42.776 526 253 10 87 608 32 513 3.90e-143 425
MsG0180000805.01.T01 MTR_8g042900 41.667 588 303 14 33 608 22 581 1.24e-140 421
MsG0180000805.01.T01 MTR_8g104655 41.573 534 274 9 86 608 35 541 1.62e-140 419
MsG0180000805.01.T01 MTR_4g025730 42.115 539 263 12 72 608 18 509 3.55e-136 407
MsG0180000805.01.T01 MTR_4g087970 45.788 463 223 8 148 609 83 518 9.53e-136 406
MsG0180000805.01.T01 MTR_4g124520 42.832 558 260 17 60 608 14 521 9.46e-134 401
MsG0180000805.01.T01 MTR_4g025670 43.966 464 218 8 148 608 65 489 4.32e-133 399
MsG0180000805.01.T01 MTR_2g044810 41.035 541 273 13 75 608 33 534 7.15e-132 397
MsG0180000805.01.T01 MTR_7g108875 42.196 583 290 13 50 608 5 564 4.65e-131 396
MsG0180000805.01.T01 MTR_8g042910 44.239 486 232 8 147 608 142 612 1.18e-130 397
MsG0180000805.01.T01 MTR_8g023150 41.386 534 277 11 79 604 73 578 3.64e-130 394
MsG0180000805.01.T01 MTR_1g054880 45.929 479 225 8 148 608 96 558 1.00e-129 392
MsG0180000805.01.T01 MTR_3g010770 41.049 553 279 11 87 608 39 575 4.82e-129 391
MsG0180000805.01.T01 MTR_8g104645 51.541 357 163 6 256 608 22 372 4.88e-129 384
MsG0180000805.01.T01 MTR_1g088020 42.202 545 271 11 87 608 32 555 1.59e-128 389
MsG0180000805.01.T01 MTR_7g108900 39.927 551 278 12 87 610 38 562 1.49e-126 384
MsG0180000805.01.T01 MTR_1g083520 40.672 536 271 13 84 608 29 528 8.21e-126 381
MsG0180000805.01.T01 MTR_7g108890 41.682 547 283 11 79 608 35 562 1.04e-125 382
MsG0180000805.01.T01 MTR_4g035980 44.325 467 226 11 146 608 103 539 1.70e-125 381
MsG0180000805.01.T01 MTR_7g053360 43.441 465 227 10 146 608 97 527 9.40e-124 376
MsG0180000805.01.T01 MTR_1g088225 41.590 541 270 12 87 604 32 549 9.12e-123 374
MsG0180000805.01.T01 MTR_3g008640 42.184 467 230 9 146 608 97 527 9.71e-123 373
MsG0180000805.01.T01 MTR_1g083510 34.291 592 351 9 36 607 9 582 1.96e-122 374
MsG0180000805.01.T01 MTR_3g008720 42.184 467 230 9 146 608 97 527 4.38e-122 372
MsG0180000805.01.T01 MTR_3g008700 43.011 465 229 10 146 608 97 527 9.82e-122 370
MsG0180000805.01.T01 MTR_3g033690 42.275 466 231 9 146 608 96 526 1.65e-121 370
MsG0180000805.01.T01 MTR_4g124550 36.842 551 317 11 66 608 66 593 7.26e-119 365
MsG0180000805.01.T01 MTR_7g112590 35.559 599 338 15 33 607 8 582 5.56e-116 358
MsG0180000805.01.T01 MTR_1g083470 35.130 575 342 11 42 608 19 570 1.27e-114 354
MsG0180000805.01.T01 MTR_1g083500 35.130 575 342 11 42 608 19 570 1.27e-114 354
MsG0180000805.01.T01 MTR_1g083490 34.375 576 344 11 42 605 19 572 6.59e-111 345
MsG0180000805.01.T01 MTR_4g005170 34.079 581 348 11 43 608 15 575 4.50e-110 344
MsG0180000805.01.T01 MTR_0458s0030 59.176 267 107 2 342 608 50 314 1.19e-109 332
MsG0180000805.01.T01 MTR_1g088040 59.176 267 107 2 342 608 50 314 1.19e-109 332
MsG0180000805.01.T01 MTR_1g086190 34.875 562 318 13 66 609 33 564 8.24e-109 338
MsG0180000805.01.T01 MTR_1g086210 35.935 551 319 11 76 609 37 570 1.64e-107 335
MsG0180000805.01.T01 MTR_4g005180 33.910 578 348 11 43 608 2 557 4.61e-107 334
MsG0180000805.01.T01 MTR_8g104580 36.754 536 264 12 86 608 27 500 2.06e-106 330
MsG0180000805.01.T01 MTR_7g110440 35.196 537 317 11 87 608 46 566 8.33e-104 326
MsG0180000805.01.T01 MTR_2g436040 33.274 565 333 11 50 608 21 547 5.00e-102 322
MsG0180000805.01.T01 MTR_0618s0020 59.471 227 92 0 382 608 2 228 4.92e-101 306
MsG0180000805.01.T01 MTR_8g093460 35.832 547 294 15 83 609 43 552 3.74e-100 316
MsG0180000805.01.T01 MTR_7g110490 32.826 591 356 13 35 609 2 567 6.68e-100 316
MsG0180000805.01.T01 MTR_7g110510 32.826 591 356 13 35 609 2 567 6.68e-100 316
MsG0180000805.01.T01 MTR_7g110560 32.062 577 343 13 48 608 6 549 2.94e-98 311
MsG0180000805.01.T01 MTR_4g120280 34.011 541 323 13 78 607 54 571 9.06e-98 310
MsG0180000805.01.T01 MTR_4g120290 33.026 542 329 12 77 607 53 571 1.16e-97 310
MsG0180000805.01.T01 MTR_2g044810 54.183 251 114 1 358 608 216 465 9.65e-97 304
MsG0180000805.01.T01 MTR_3g095920 32.353 612 313 20 41 607 8 563 9.98e-89 286
MsG0180000805.01.T01 MTR_2g436050 33.577 548 322 11 68 607 50 563 2.87e-88 285
MsG0180000805.01.T01 MTR_2g044660 47.452 314 158 5 295 608 326 632 3.49e-88 286
MsG0180000805.01.T01 MTR_2g044660 24.779 226 134 8 36 245 22 227 3.24e-11 66.6
MsG0180000805.01.T01 MTR_7g110420 32.967 546 329 13 87 608 46 578 7.15e-88 285
MsG0180000805.01.T01 MTR_7g110430 31.657 537 302 13 87 608 46 532 2.95e-83 271
MsG0180000805.01.T01 MTR_8g088610 39.104 335 194 7 273 604 45 372 4.49e-79 255
MsG0180000805.01.T01 MTR_5g083620 38.643 339 203 4 274 610 23 358 1.96e-73 239
MsG0180000805.01.T01 MTR_0458s0010 33.761 545 272 16 87 604 32 514 1.61e-71 239
MsG0180000805.01.T01 MTR_2g105560 37.261 314 183 4 295 608 40 339 2.63e-67 223
MsG0180000805.01.T01 MTR_7g107180 38.095 315 179 5 296 608 7 307 1.68e-66 219
MsG0180000805.01.T01 MTR_7g111560 28.645 583 348 18 41 608 27 556 3.37e-62 216
MsG0180000805.01.T01 MTR_6g012800 35.390 308 170 7 296 591 5 295 2.98e-52 182
MsG0180000805.01.T01 MTR_1g086540 32.578 353 209 8 257 599 13 346 5.50e-49 174
MsG0180000805.01.T01 MTR_2g039530 37.705 305 170 10 272 573 30 317 6.42e-49 174
MsG0180000805.01.T01 MTR_6g088810 34.405 311 177 7 298 597 83 377 2.17e-48 173
MsG0180000805.01.T01 MTR_8g102380 33.968 315 179 7 298 599 81 379 3.46e-47 170
MsG0180000805.01.T01 MTR_6g024165 33.028 327 186 11 285 597 27 334 4.39e-46 166
MsG0180000805.01.T01 MTR_5g083590 30.945 307 160 5 303 608 13 268 3.86e-43 156
MsG0180000805.01.T01 MTR_5g095490 35.831 307 169 7 303 597 67 357 6.30e-43 158
MsG0180000805.01.T01 MTR_7g092780 32.776 299 178 6 309 597 102 387 6.58e-43 159
MsG0180000805.01.T01 MTR_7g011530 32.087 321 186 8 292 597 1 304 1.28e-41 153
MsG0180000805.01.T01 MTR_6g042660 32.180 289 167 7 287 570 32 296 1.36e-40 150
MsG0180000805.01.T01 MTR_7g102600 32.450 302 184 5 303 597 105 393 1.49e-40 152
MsG0180000805.01.T01 MTR_8g102380 34.615 260 143 6 298 544 81 326 1.56e-38 145
MsG0180000805.01.T01 MTR_5g093970 31.169 308 190 7 294 597 40 329 9.86e-38 143
MsG0180000805.01.T01 MTR_6g042690 33.562 292 170 7 297 581 39 313 2.12e-36 139
MsG0180000805.01.T01 MTR_4g124740 29.688 320 192 10 287 597 44 339 2.37e-36 139
MsG0180000805.01.T01 MTR_5g012600 30.284 317 193 7 296 600 62 362 2.72e-36 139
MsG0180000805.01.T01 MTR_2g033970 30.693 303 188 7 303 599 62 348 3.57e-36 139
MsG0180000805.01.T01 MTR_5g088300 29.808 312 196 6 295 605 35 324 6.09e-36 137
MsG0180000805.01.T01 MTR_2g073390 31.153 321 193 9 286 597 60 361 1.97e-33 132
MsG0180000805.01.T01 MTR_1g033050 30.743 296 181 7 285 570 3 284 2.12e-33 130
MsG0180000805.01.T01 MTR_4g051810 29.605 304 194 6 294 597 34 317 2.58e-32 127
MsG0180000805.01.T01 MTR_5g088280 29.900 301 190 6 297 597 39 318 8.52e-31 123
MsG0180000805.01.T01 MTR_4g074290 29.102 323 197 9 286 597 60 361 2.97e-29 119
MsG0180000805.01.T01 MTR_5g088290 28.904 301 194 6 297 597 48 328 8.88e-29 117
MsG0180000805.01.T01 MTR_0009s0350 32.028 281 172 8 286 560 60 327 2.71e-28 117
MsG0180000805.01.T01 MTR_0009s0340 32.028 281 172 8 286 560 60 327 2.71e-28 117
MsG0180000805.01.T01 MTR_2g436070 26.647 334 210 9 42 369 17 321 6.03e-26 110
MsG0180000805.01.T01 MTR_2g436600 27.632 304 187 10 303 599 61 338 4.20e-25 107
MsG0180000805.01.T01 MTR_8g036225 27.760 317 197 9 296 600 32 328 1.69e-24 105
MsG0180000805.01.T01 MTR_6g025590 28.962 183 119 4 285 457 35 216 1.64e-19 88.6
MsG0180000805.01.T01 MTR_6g024200 35.404 161 82 6 438 597 137 276 1.85e-18 86.3
MsG0180000805.01.T01 MTR_4g035880 32.941 170 89 5 83 244 37 189 4.06e-18 83.6
MsG0180000805.01.T01 MTR_4g035870 32.941 170 89 5 83 244 37 189 9.91e-18 82.4
MsG0180000805.01.T01 MTR_0408s0030 40.741 108 54 2 474 581 36 133 1.40e-17 80.5
MsG0180000805.01.T01 MTR_5g012000 29.762 168 106 3 79 243 45 203 7.45e-16 77.4
MsG0180000805.01.T01 MTR_4g035905 31.737 167 95 4 83 244 37 189 2.57e-15 75.1
MsG0180000805.01.T01 MTR_4g101760 27.103 214 126 7 37 243 4 194 1.96e-14 72.8
MsG0180000805.01.T01 MTR_3g008840 28.070 171 110 4 77 244 20 180 3.40e-14 71.6
MsG0180000805.01.T01 MTR_7g108790 29.744 195 107 6 66 254 26 196 4.86e-14 71.6
MsG0180000805.01.T01 MTR_3g008820 26.554 177 117 4 77 250 19 185 7.59e-14 70.9
MsG0180000805.01.T01 MTR_7g102580 35.000 120 65 4 341 452 39 153 3.91e-12 65.1
MsG0180000805.01.T01 MTR_8g104765 25.854 205 135 5 48 243 10 206 5.74e-12 65.9
MsG0180000805.01.T01 MTR_4g120825 27.108 166 112 4 83 243 36 197 9.92e-12 65.1
MsG0180000805.01.T01 MTR_4g120830 26.506 166 113 4 83 243 36 197 2.65e-11 63.9
MsG0180000805.01.T01 MTR_4g025610 27.222 180 99 7 83 246 33 196 6.48e-11 62.8
MsG0180000805.01.T01 MTR_4g025620 26.941 219 121 9 44 246 1 196 9.66e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000805.01.T01 AT5G53370 62.745 612 199 9 1 609 1 586 0.0 791
MsG0180000805.01.T01 AT5G53370 62.582 612 200 9 1 609 37 622 0.0 791
MsG0180000805.01.T01 AT3G49220 62.097 620 201 10 1 609 1 597 0.0 773
MsG0180000805.01.T01 AT3G49220 62.097 620 201 10 1 609 46 642 0.0 772
MsG0180000805.01.T01 AT3G14310 43.942 619 289 13 20 608 2 592 3.88e-164 482
MsG0180000805.01.T01 AT1G53830 44.833 600 298 10 20 604 2 583 4.98e-162 476
MsG0180000805.01.T01 AT3G43270 48.447 483 234 7 126 608 58 525 2.43e-154 454
MsG0180000805.01.T01 AT1G11580 42.295 610 288 13 15 604 9 574 2.49e-151 448
MsG0180000805.01.T01 AT1G11580 43.027 588 278 12 30 604 10 553 1.12e-150 446
MsG0180000805.01.T01 AT4G33220 47.890 474 224 6 144 608 64 523 1.74e-146 434
MsG0180000805.01.T01 AT4G02300 45.686 510 231 10 113 608 55 532 2.66e-143 426
MsG0180000805.01.T01 AT3G05620 46.996 466 224 6 144 609 100 542 5.95e-141 421
MsG0180000805.01.T01 AT5G27870 38.860 579 324 10 33 608 11 562 2.10e-140 426
MsG0180000805.01.T01 AT2G45220 45.161 527 235 13 87 608 34 511 8.45e-140 417
MsG0180000805.01.T01 AT2G43050 44.711 501 224 11 114 608 63 516 5.07e-139 415
MsG0180000805.01.T01 AT4G02320 43.385 514 239 8 113 608 39 518 5.97e-139 415
MsG0180000805.01.T01 AT3G59010 44.158 505 245 9 106 608 59 528 2.55e-138 413
MsG0180000805.01.T01 AT3G05610 37.694 581 332 10 33 608 10 565 2.29e-136 413
MsG0180000805.01.T01 AT3G10710 41.579 570 297 12 41 608 26 561 4.95e-136 409
MsG0180000805.01.T01 AT4G02330 41.228 570 270 13 79 608 27 571 6.48e-135 406
MsG0180000805.01.T01 AT1G23200 41.538 585 272 14 52 608 12 554 3.82e-134 404
MsG0180000805.01.T01 AT4G33220 49.754 406 191 4 212 608 1 402 4.80e-134 398
MsG0180000805.01.T01 AT1G02810 44.576 507 230 10 140 608 84 577 2.01e-131 397
MsG0180000805.01.T01 AT5G49180 39.555 584 319 15 36 608 10 570 2.40e-131 397
MsG0180000805.01.T01 AT1G53840 39.405 538 287 12 79 602 69 581 2.92e-131 397
MsG0180000805.01.T01 AT5G04960 38.850 574 317 10 33 604 19 560 1.82e-129 392
MsG0180000805.01.T01 AT2G26440 42.214 533 271 13 87 608 41 547 3.62e-129 390
MsG0180000805.01.T01 AT3G10720 42.077 549 275 9 87 608 83 615 1.06e-128 392
MsG0180000805.01.T01 AT2G47550 45.030 493 222 9 140 608 91 558 1.75e-127 387
MsG0180000805.01.T01 AT5G51490 41.808 531 268 13 87 608 38 536 1.05e-123 376
MsG0180000805.01.T01 AT5G04970 41.007 556 271 13 87 608 88 620 1.41e-123 379
MsG0180000805.01.T01 AT3G49220 52.442 389 151 10 1 378 46 411 4.86e-122 368
MsG0180000805.01.T01 AT3G06830 36.724 580 322 13 48 606 11 566 7.57e-121 370
MsG0180000805.01.T01 AT3G60730 40.918 501 240 10 151 608 32 519 8.49e-121 368
MsG0180000805.01.T01 AT5G51500 40.748 535 268 14 87 608 42 540 5.24e-120 367
MsG0180000805.01.T01 AT3G14300 38.679 530 296 11 76 598 452 959 1.23e-119 378
MsG0180000805.01.T01 AT3G14300 24.686 239 160 8 33 263 25 251 1.83e-13 74.3
MsG0180000805.01.T01 AT3G14300 22.346 179 114 4 79 245 267 432 7.62e-11 65.9
MsG0180000805.01.T01 AT3G47400 42.616 474 244 8 139 608 145 594 3.38e-119 366
MsG0180000805.01.T01 AT4G00190 40.840 524 251 14 87 608 8 474 9.32e-119 361
MsG0180000805.01.T01 AT2G26450 38.165 545 289 14 78 608 101 611 5.62e-116 358
MsG0180000805.01.T01 AT5G20860 39.854 547 265 16 83 608 35 538 6.42e-116 356
MsG0180000805.01.T01 AT4G33230 38.433 536 296 13 83 608 95 606 7.33e-116 358
MsG0180000805.01.T01 AT3G10720 61.923 260 98 1 349 608 1 259 5.64e-114 341
MsG0180000805.01.T01 AT4G03930 42.005 419 224 6 192 608 123 524 4.27e-111 343
MsG0180000805.01.T01 AT1G11590 38.050 523 285 13 96 608 31 524 3.53e-107 333
MsG0180000805.01.T01 AT3G27980 41.463 410 221 8 199 608 107 497 5.91e-103 321
MsG0180000805.01.T01 AT5G20860 36.484 529 242 16 83 589 35 491 2.29e-92 294
MsG0180000805.01.T01 AT5G64640 33.122 631 324 22 23 600 16 601 5.91e-90 290
MsG0180000805.01.T01 AT4G15980 44.379 338 182 6 272 606 366 700 1.93e-89 292
MsG0180000805.01.T01 AT4G15980 44.379 338 182 6 272 606 376 710 3.10e-89 291
MsG0180000805.01.T01 AT3G62170 32.113 601 347 14 46 608 11 588 1.15e-87 284
MsG0180000805.01.T01 AT5G09760 36.262 535 287 19 83 596 45 546 9.02e-87 281
MsG0180000805.01.T01 AT5G09760 36.262 535 287 19 83 596 71 572 1.93e-86 281
MsG0180000805.01.T01 AT1G11370 47.082 257 132 3 284 538 32 286 6.55e-82 259
MsG0180000805.01.T01 AT2G47030 40.055 362 197 8 261 608 233 588 1.36e-77 258
MsG0180000805.01.T01 AT2G47040 40.947 359 195 8 261 608 243 595 3.00e-77 257
MsG0180000805.01.T01 AT5G19730 33.242 364 199 10 258 597 38 381 2.97e-50 179
MsG0180000805.01.T01 AT2G36710 33.550 307 184 6 303 602 97 390 7.29e-45 164
MsG0180000805.01.T01 AT1G44980 42.105 190 106 3 274 461 54 241 1.32e-41 151
MsG0180000805.01.T01 AT5G55590 35.350 314 174 9 296 597 82 378 2.06e-41 154
MsG0180000805.01.T01 AT2G21610 31.699 306 186 7 294 597 48 332 3.54e-41 153
MsG0180000805.01.T01 AT2G21610 31.699 306 186 7 294 597 53 337 5.67e-41 152
MsG0180000805.01.T01 AT3G29090 33.214 280 161 5 303 570 13 278 4.00e-40 149
MsG0180000805.01.T01 AT1G05310 30.994 342 198 9 269 597 72 388 4.37e-40 151
MsG0180000805.01.T01 AT2G36700 32.673 303 179 6 303 597 48 333 3.18e-39 147
MsG0180000805.01.T01 AT5G55590 36.434 258 138 7 296 541 82 325 3.21e-39 147
MsG0180000805.01.T01 AT3G17060 29.870 308 194 7 297 598 46 337 2.05e-36 139
MsG0180000805.01.T01 AT3G24130 31.633 294 175 7 288 570 26 304 2.59e-35 136
MsG0180000805.01.T01 AT5G47500 29.618 314 193 8 296 597 60 357 1.40e-34 135
MsG0180000805.01.T01 AT5G07430 29.781 319 198 7 286 597 56 355 1.92e-34 134
MsG0180000805.01.T01 AT5G18990 31.707 287 170 7 295 570 28 299 6.69e-33 129
MsG0180000805.01.T01 AT5G07420 28.107 338 215 7 272 597 34 355 3.35e-32 128
MsG0180000805.01.T01 AT1G69940 29.739 306 194 8 297 597 66 355 4.14e-32 128
MsG0180000805.01.T01 AT5G61680 30.599 317 199 7 286 597 58 358 2.93e-31 125
MsG0180000805.01.T01 AT2G19150 28.834 326 200 9 290 604 35 339 1.28e-30 123
MsG0180000805.01.T01 AT5G07410 29.412 306 195 8 297 597 66 355 1.32e-30 123
MsG0180000805.01.T01 AT2G19150 30.268 261 157 7 290 541 35 279 1.91e-27 112
MsG0180000805.01.T01 AT2G47280 28.660 321 202 7 286 597 25 327 1.00e-24 106
MsG0180000805.01.T01 AT5G26810 26.603 312 206 7 297 597 34 333 3.55e-23 101
MsG0180000805.01.T01 AT5G62360 29.412 170 98 5 81 244 42 195 1.44e-13 70.5
MsG0180000805.01.T01 AT3G62820 31.638 177 91 5 50 219 5 158 2.04e-13 69.7
MsG0180000805.01.T01 AT2G47670 30.726 179 110 3 68 244 34 200 5.00e-13 68.9
MsG0180000805.01.T01 AT1G70720 29.050 179 113 4 74 249 28 195 8.14e-13 68.2
MsG0180000805.01.T01 AT1G70720 29.050 179 113 4 74 249 40 207 9.05e-13 68.2
MsG0180000805.01.T01 AT1G62760 30.460 174 109 4 83 253 148 312 1.06e-12 69.7
MsG0180000805.01.T01 AT3G47380 27.604 192 128 4 58 246 14 197 1.32e-12 67.4
MsG0180000805.01.T01 AT5G20740 25.595 168 116 4 76 241 27 187 1.40e-12 67.4
MsG0180000805.01.T01 AT5G20740 24.490 196 131 5 48 241 41 221 1.80e-12 68.2
MsG0180000805.01.T01 AT1G62770 26.425 193 118 7 59 243 15 191 3.44e-12 66.2
MsG0180000805.01.T01 AT2G01610 26.667 180 115 4 83 250 45 219 3.73e-12 66.6
MsG0180000805.01.T01 AT5G62350 28.743 167 108 4 83 246 39 197 6.21e-12 65.5

Find 212 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCGGGTCTTTCCTATTT+TGG 0.106952 1:-11406712 None:intergenic
TATGGTGAGTACATGAATTT+TGG 0.111834 1:+11406938 MsG0180000805.01.T01:CDS
TTCCGTGAATGCAACATTTA+TGG 0.121435 1:+11406590 MsG0180000805.01.T01:CDS
GGGCAGCATTGAAACATATT+TGG 0.181591 1:+11406799 MsG0180000805.01.T01:CDS
AAAACCAATATTATGTTTAT+AGG 0.202997 1:+11405149 MsG0180000805.01.T01:CDS
TGTATATATGTTGTCCTATA+TGG 0.212516 1:+11406850 MsG0180000805.01.T01:CDS
AAATGAAAATGCAAGTTATT+AGG 0.253646 1:-11403321 None:intergenic
ACAGAACAAGAGAAGATTAA+TGG 0.261023 1:+11404231 MsG0180000805.01.T01:CDS
TGCTAGTGGTCCTGGGTTCA+TGG 0.296944 1:+11406421 MsG0180000805.01.T01:CDS
TTTGGGCCGGGCGCGGCTAT+CGG 0.299861 1:+11406956 MsG0180000805.01.T01:CDS
ACACTATTACAGCCCAAAAT+AGG 0.304327 1:+11406699 MsG0180000805.01.T01:CDS
TCCAAGTATTGCACATTAGA+TGG 0.305934 1:-11403246 None:intergenic
GATGCAGCTGCTAGTGGTCC+TGG 0.320870 1:+11406413 MsG0180000805.01.T01:intron
ATCTCCTATAAACATAATAT+TGG 0.333092 1:-11405153 None:intergenic
CGGGCGCGGCTATCGGGCAG+CGG 0.346480 1:+11406963 MsG0180000805.01.T01:CDS
GGGCGCGGCTATCGGGCAGC+GGG 0.348129 1:+11406964 MsG0180000805.01.T01:CDS
TAGGAGATTATTGAGTTTAC+CGG 0.348324 1:+11404303 MsG0180000805.01.T01:CDS
CCCTTTGATGAGGCTAGATC+CGG 0.349312 1:-11406779 None:intergenic
GGAGATTGCTTGAGTTGGTT+TGG 0.356672 1:-11403690 None:intergenic
TTGGGCCGGGCGCGGCTATC+GGG 0.356817 1:+11406957 MsG0180000805.01.T01:CDS
GTCCATGGAAAATGTATTCT+AGG 0.375245 1:+11406825 MsG0180000805.01.T01:CDS
CGAGGATTGTCTTGAACTAA+TGG 0.376468 1:+11403907 MsG0180000805.01.T01:CDS
AGCCCTCCAAACACGTATCT+TGG 0.381011 1:-11404081 None:intergenic
CGCTGCCCGATAGCCGCGCC+CGG 0.382884 1:-11406962 None:intergenic
GTATGAAGAGAATAATTTAA+AGG 0.383422 1:+11405115 MsG0180000805.01.T01:CDS
CAGAACAAGAGAAGATTAAT+GGG 0.385091 1:+11404232 MsG0180000805.01.T01:CDS
TATAACAACTTTGACTTTGA+GGG 0.390688 1:-11407336 None:intergenic
TAGTCCAAACCAACCTCAAT+TGG 0.391121 1:+11407160 MsG0180000805.01.T01:three_prime_UTR
GGGTCAAATGGCCTGGATAC+CGG 0.394953 1:+11406984 MsG0180000805.01.T01:CDS
TGCCATAAATGTTGCATTCA+CGG 0.399774 1:-11406592 None:intergenic
TCCATCTAATGTGCAATACT+TGG 0.400770 1:+11403245 MsG0180000805.01.T01:five_prime_UTR
AGTCCAAACCAACCTCAATT+GGG 0.408477 1:+11407161 MsG0180000805.01.T01:three_prime_UTR
TCTTGATTCTCCGTCGTCAT+TGG 0.410168 1:-11403993 None:intergenic
CAATATTCAATATTTCATAA+TGG 0.411167 1:+11403442 MsG0180000805.01.T01:exon
GGCAGCATTGAAACATATTT+GGG 0.412543 1:+11406800 MsG0180000805.01.T01:CDS
ACTTTCCACACTGCTTCCTT+TGG 0.412588 1:+11405230 MsG0180000805.01.T01:CDS
CTATAACAACTTTGACTTTG+AGG 0.415920 1:-11407337 None:intergenic
GAGGAGGTTTGAATTATTGT+TGG 0.417057 1:-11403663 None:intergenic
AATATTATGTTTATAGGAGA+TGG 0.417259 1:+11405155 MsG0180000805.01.T01:CDS
AATATTGTAGTGAGGATTTG+AGG 0.419325 1:-11403426 None:intergenic
TGGTTTCTGATGTGTTTGTT+TGG 0.420234 1:-11403134 None:intergenic
ATCCTTTCTATATATATTTG+TGG 0.420561 1:-11407124 None:intergenic
TTGAGCCACGGTGTATCTAT+TGG 0.427857 1:-11407029 None:intergenic
ACCAACCATCTGATCCTTAA+CGG 0.441470 1:-11404122 None:intergenic
ATTATTGAGTTTACCGGTAT+CGG 0.442315 1:+11404309 MsG0180000805.01.T01:CDS
GCCACCGCTTGGTGCTTCTC+CGG 0.443835 1:-11406476 None:intergenic
GATGTGGTGGAGGGTGTTAG+AGG 0.444016 1:-11403521 None:intergenic
CTCAGTTGATCCAGCGACAT+TGG 0.451584 1:-11404023 None:intergenic
ATGTTGAACCAGGGAAATCT+AGG 0.456194 1:-11403760 None:intergenic
CTTGAGTTGGTTTGGAATGG+AGG 0.461342 1:-11403682 None:intergenic
GAGTTGGTTTGGAATGGAGG+AGG 0.461413 1:-11403679 None:intergenic
GAAAGACCCGAATCAAAATA+CGG 0.461601 1:+11406721 MsG0180000805.01.T01:CDS
AAAGCACTCTTCGCCTCCTC+AGG 0.465261 1:+11403842 MsG0180000805.01.T01:CDS
GATCAAGGCGGCGGCGAGGA+TGG 0.466779 1:-11403585 None:intergenic
TGGTAACTTAAAAGATTTGT+CGG 0.467118 1:+11404141 MsG0180000805.01.T01:CDS
GGGCAGCGGGTCAAATGGCC+TGG 0.467740 1:+11406977 MsG0180000805.01.T01:CDS
CTATCGGGCAGCGGGTCAAA+TGG 0.470261 1:+11406972 MsG0180000805.01.T01:CDS
GAAGAGAATAATTTAAAGGT+GGG 0.478911 1:+11405119 MsG0180000805.01.T01:CDS
CTGCACTGATCACCGTTGTC+CGG 0.480159 1:+11403627 MsG0180000805.01.T01:CDS
AGACACAAGCGGTACCGTTA+AGG 0.484475 1:+11404108 MsG0180000805.01.T01:CDS
GAAAATGCAAGTTATTAGGT+TGG 0.485884 1:-11403317 None:intergenic
GACAAACCAAGATACGTGTT+TGG 0.486282 1:+11404075 MsG0180000805.01.T01:CDS
TTGCTTGAGTTGGTTTGGAA+TGG 0.491625 1:-11403685 None:intergenic
GAAGTAATAACCCGGTATCC+AGG 0.492214 1:-11406995 None:intergenic
AGGGGCAAAACTGTCATCAC+AGG 0.494221 1:+11405179 MsG0180000805.01.T01:CDS
ACCGTGGCTCAATTCATCTC+TGG 0.495450 1:+11407040 MsG0180000805.01.T01:CDS
ATGCAGCTGCTAGTGGTCCT+GGG 0.496093 1:+11406414 MsG0180000805.01.T01:intron
AGAGGAATTTGATGTGGTGG+AGG 0.496127 1:-11403531 None:intergenic
GGTCAAATGGCCTGGATACC+GGG 0.497774 1:+11406985 MsG0180000805.01.T01:CDS
GATCGACGGGAGGAGCCACC+AGG 0.500114 1:-11403491 None:intergenic
AAACATATTTGGGTCGTCCA+TGG 0.500352 1:+11406810 MsG0180000805.01.T01:CDS
ATGCACATGATCACCCATAT+AGG 0.500866 1:-11406864 None:intergenic
ATTCGAGAACTACGCTGGAC+CGG 0.501618 1:+11406457 MsG0180000805.01.T01:CDS
AACTCCCTCCTAGATTTCCC+TGG 0.503508 1:+11403752 MsG0180000805.01.T01:CDS
TCAGAAGCTGATGTTGAACC+AGG 0.505409 1:-11403770 None:intergenic
CGTGGTCATGAGGGAGTCCA+TGG 0.509614 1:-11403957 None:intergenic
AGTGGCTTCAGATACGAGAT+AGG 0.510712 1:+11404284 MsG0180000805.01.T01:CDS
CACCACAAATATATATAGAA+AGG 0.511077 1:+11407122 MsG0180000805.01.T01:three_prime_UTR
GTTCGGGAGATTGCTTGAGT+TGG 0.511105 1:-11403695 None:intergenic
GATGGCGGAGGCGATGATCA+AGG 0.512134 1:-11403600 None:intergenic
GTATATATGTTGTCCTATAT+GGG 0.513267 1:+11406851 MsG0180000805.01.T01:CDS
GTATATCCATTCATGATTGT+CGG 0.516631 1:+11406744 MsG0180000805.01.T01:CDS
TCGTATGCAGCACGGACCCG+TGG 0.518768 1:-11403887 None:intergenic
ATAATGGACTTTGATAGACT+TGG 0.519372 1:+11403458 MsG0180000805.01.T01:exon
GATCATCGCCTCCGCCATCT+CGG 0.520929 1:+11403604 MsG0180000805.01.T01:CDS
AGACTTGGACCGTCTGATCC+TGG 0.521448 1:+11403473 MsG0180000805.01.T01:CDS
TCTCGTATCTGAAGCCACTT+AGG 0.522416 1:-11404280 None:intergenic
CCTTTGATGAGGCTAGATCC+GGG 0.524248 1:-11406778 None:intergenic
TGAACTAATGGACGAGTCCA+TGG 0.525307 1:+11403919 MsG0180000805.01.T01:CDS
TTTATAATTTACGTGAGGGC+AGG 0.526556 1:+11404433 MsG0180000805.01.T01:CDS
AGACAATTCTCCAATGTCGC+TGG 0.528232 1:+11404013 MsG0180000805.01.T01:CDS
GTTTCAAAGAGTGGTGGTAA+TGG 0.529115 1:+11404352 MsG0180000805.01.T01:CDS
TGTCTAAGTAATTAGCTAGC+TGG 0.531870 1:-11403283 None:intergenic
TTACTTGATGCAGCTGCTAG+TGG 0.536770 1:+11406407 MsG0180000805.01.T01:intron
GGATGATCTGATAGCATCCA+TGG 0.538421 1:-11403936 None:intergenic
AGGGAGTTGATACAAAGTGA+AGG 0.539841 1:-11403737 None:intergenic
ATCACAGGGAAAAGAAGTGT+TGG 0.540719 1:+11405194 MsG0180000805.01.T01:CDS
ATATTATGTTTATAGGAGAT+GGG 0.541114 1:+11405156 MsG0180000805.01.T01:CDS
CGTATACAGTCGCGAACCCA+CGG 0.541345 1:+11403870 MsG0180000805.01.T01:CDS
TGTGCATCCACACGGATGGT+TGG 0.542583 1:+11406880 MsG0180000805.01.T01:CDS
TGTTAGTTAGTTATGATGAG+AGG 0.543623 1:-11403393 None:intergenic
TGGAGAGGAATTTGATGTGG+TGG 0.544468 1:-11403534 None:intergenic
TTAGAGGTGCGGTGGATCGA+CGG 0.544704 1:-11403505 None:intergenic
GGTGATCAGTGCAGCCGAGA+TGG 0.544756 1:-11403618 None:intergenic
GTGTACCGCTGCAATATTGT+TGG 0.545330 1:+11406527 MsG0180000805.01.T01:CDS
TAGAGGTGCGGTGGATCGAC+GGG 0.546390 1:-11403504 None:intergenic
TCGTCGTGGTTACCGTCCAC+CGG 0.549566 1:+11407064 MsG0180000805.01.T01:CDS
TGAAGAGAATAATTTAAAGG+TGG 0.550293 1:+11405118 MsG0180000805.01.T01:CDS
CCGGATCTAGCCTCATCAAA+GGG 0.552928 1:+11406779 MsG0180000805.01.T01:CDS
TCAGCTTGTATCTCCGATAC+CGG 0.553416 1:-11404322 None:intergenic
TAGGATCCGACAATCATGAA+TGG 0.553725 1:-11406750 None:intergenic
GCGGTACACCACCGCGTGAT+CGG 0.558501 1:-11406513 None:intergenic
AAACCAAGATACGTGTTTGG+AGG 0.559159 1:+11404078 MsG0180000805.01.T01:CDS
GATATTATCGTTTCAAAGAG+TGG 0.559809 1:+11404343 MsG0180000805.01.T01:CDS
TGTTGGATGAAGCACGAGAC+CGG 0.559953 1:-11403646 None:intergenic
TATGTTTATAGGAGATGGGA+GGG 0.561324 1:+11405160 MsG0180000805.01.T01:CDS
CGGTACCGTTAAGGATCAGA+TGG 0.561610 1:+11404117 MsG0180000805.01.T01:CDS
GGATGCTATCAGATCATCCA+TGG 0.561647 1:+11403940 MsG0180000805.01.T01:CDS
CGACACGGAGGGCCACCGCT+TGG 0.565889 1:-11406487 None:intergenic
TTCAATGCTGCCCTTTGATG+AGG 0.566163 1:-11406789 None:intergenic
TTGTCGGATCCTACCTGCCC+CGG 0.567415 1:+11406760 MsG0180000805.01.T01:CDS
CAAGCGGTGGCCCTCCGTGT+CGG 0.567643 1:+11406488 MsG0180000805.01.T01:CDS
CAGTGCAGCCGAGATGGCGG+AGG 0.567794 1:-11403612 None:intergenic
AACCAAGATACGTGTTTGGA+GGG 0.569558 1:+11404079 MsG0180000805.01.T01:CDS
CCGGGTTATTACTTCAACTG+TGG 0.570199 1:+11407003 MsG0180000805.01.T01:CDS
ATAACAACTTTGACTTTGAG+GGG 0.572238 1:-11407335 None:intergenic
CCCGGATCTAGCCTCATCAA+AGG 0.573307 1:+11406778 MsG0180000805.01.T01:CDS
GTCCAAACCAACCTCAATTG+GGG 0.574188 1:+11407162 MsG0180000805.01.T01:three_prime_UTR
TAGATTTATAATTTACGTGA+GGG 0.574524 1:+11404429 MsG0180000805.01.T01:CDS
CAACTGAGGACGTGATGACA+TGG 0.576733 1:+11404038 MsG0180000805.01.T01:CDS
GGAGGCGATGATCAAGGCGG+CGG 0.577310 1:-11403594 None:intergenic
AGGCTAGATCCGGGGCAGGT+AGG 0.579770 1:-11406769 None:intergenic
GGGAGTTGATACAAAGTGAA+GGG 0.580279 1:-11403736 None:intergenic
ATGGAATCAATATATAGAAG+AGG 0.581296 1:-11403227 None:intergenic
CTTTCTATATATATTTGTGG+TGG 0.582282 1:-11407121 None:intergenic
AATCTACGATGACTATGCTC+CGG 0.584685 1:-11404412 None:intergenic
GAGGAATTTGATGTGGTGGA+GGG 0.587484 1:-11403530 None:intergenic
AAAGACCCGAATCAAAATAC+GGG 0.588447 1:+11406722 MsG0180000805.01.T01:CDS
ATCCACACGGATGGTTGGAA+TGG 0.594560 1:+11406885 MsG0180000805.01.T01:CDS
GATGAGGCTAGATCCGGGGC+AGG 0.594623 1:-11406773 None:intergenic
ACCGTTAAGGATCAGATGGT+TGG 0.594659 1:+11404121 MsG0180000805.01.T01:CDS
TCTCGCGAGAATTTCCTAAG+TGG 0.595739 1:+11404266 MsG0180000805.01.T01:CDS
AAGTTGAGGACGTGGTCATG+AGG 0.597730 1:-11403967 None:intergenic
GGGAAAAGAAGTGTTGGAGA+TGG 0.599299 1:+11405200 MsG0180000805.01.T01:CDS
ATTACATTCGAGAACTACGC+TGG 0.600423 1:+11406452 MsG0180000805.01.T01:CDS
AGTTGAGGACGTGGTCATGA+GGG 0.600467 1:-11403966 None:intergenic
CGTATCTTGGTTTGTCAGTG+CGG 0.601416 1:-11404068 None:intergenic
AAATATTGAATATTGTAGTG+AGG 0.604793 1:-11403434 None:intergenic
AAAGAGTGGTGGTAATGGTA+CGG 0.605275 1:+11404357 MsG0180000805.01.T01:CDS
AAAGGAAGCAGTGTGGAAAG+TGG 0.608148 1:-11405228 None:intergenic
GTAGATTTATAATTTACGTG+AGG 0.608963 1:+11404428 MsG0180000805.01.T01:CDS
ACGGGTCCGTGCTGCATACG+AGG 0.609433 1:+11403889 MsG0180000805.01.T01:CDS
GGTTATTACTTCAACTGTGG+AGG 0.611922 1:+11407006 MsG0180000805.01.T01:CDS
TGAAGCTATTAAGAAAGCAC+CGG 0.617561 1:+11404393 MsG0180000805.01.T01:CDS
TTATGTTTATAGGAGATGGG+AGG 0.620089 1:+11405159 MsG0180000805.01.T01:CDS
ACCGGAGAAGCACCAAGCGG+TGG 0.620754 1:+11406475 MsG0180000805.01.T01:CDS
AGAGTGCTTTGCTTATATGA+CGG 0.620772 1:-11403829 None:intergenic
CGATGATCAAGGCGGCGGCG+AGG 0.621347 1:-11403589 None:intergenic
GGAGGGTGTTAGAGGTGCGG+TGG 0.622415 1:-11403513 None:intergenic
AAGAGAATAATTTAAAGGTG+GGG 0.623602 1:+11405120 MsG0180000805.01.T01:CDS
TGGTGATCAAGTGGATAACC+CGG 0.624738 1:-11407101 None:intergenic
TATAACTAAAATATACATTG+AGG 0.625124 1:+11403157 MsG0180000805.01.T01:five_prime_UTR
TATTTGTGGTGGTGATCAAG+TGG 0.626948 1:-11407110 None:intergenic
CATTTATGCACGTAAACCCA+TGG 0.626962 1:+11406664 MsG0180000805.01.T01:CDS
CGTATGCAGCACGGACCCGT+GGG 0.627755 1:-11403886 None:intergenic
GACAATCCTCGTATGCAGCA+CGG 0.630284 1:-11403895 None:intergenic
ATTGGATAAAGTTGAGGACG+TGG 0.630313 1:-11403975 None:intergenic
GATCAGTGCAGCCGAGATGG+CGG 0.631056 1:-11403615 None:intergenic
GAGGAGCCACCAGGATCAGA+CGG 0.632234 1:-11403482 None:intergenic
TAATTTACGTGAGGGCAGGA+AGG 0.632968 1:+11404437 MsG0180000805.01.T01:CDS
CACGGATGGTTGGAATGGAA+TGG 0.633570 1:+11406890 MsG0180000805.01.T01:CDS
TCCAAACCAACCTCAATTGG+GGG 0.635188 1:+11407163 MsG0180000805.01.T01:three_prime_UTR
GTATACAGTCGCGAACCCAC+GGG 0.636315 1:+11403871 MsG0180000805.01.T01:CDS
CCGCGTGATCGGATCCGACA+CGG 0.642372 1:-11406502 None:intergenic
CCACAGTTGAAGTAATAACC+CGG 0.642586 1:-11407003 None:intergenic
ATGTTTATAGGAGATGGGAG+GGG 0.642837 1:+11405161 MsG0180000805.01.T01:CDS
TGAATGCAACATTTATGGCA+CGG 0.644116 1:+11406595 MsG0180000805.01.T01:CDS
AGGTGCGGTGGATCGACGGG+AGG 0.644676 1:-11403501 None:intergenic
GTGGTTACCGTCCACCGGAG+TGG 0.645781 1:+11407069 MsG0180000805.01.T01:CDS
TAACAACTTTGACTTTGAGG+GGG 0.647309 1:-11407334 None:intergenic
GGTGGAGGGTGTTAGAGGTG+CGG 0.650584 1:-11403516 None:intergenic
ATGTCACGTGCCATGAACCC+AGG 0.651349 1:-11406431 None:intergenic
TTGAACCAGGGAAATCTAGG+AGG 0.653276 1:-11403757 None:intergenic
GAGGGCTTTGAAGACACAAG+CGG 0.653886 1:+11404097 MsG0180000805.01.T01:CDS
CTTTGATGAGGCTAGATCCG+GGG 0.654017 1:-11406777 None:intergenic
ACCAGAGATGAATTGAGCCA+CGG 0.657222 1:-11407041 None:intergenic
CCAAACCAACCTCAATTGGG+GGG 0.658886 1:+11407164 MsG0180000805.01.T01:three_prime_UTR
CCGTGTCGGATCCGATCACG+CGG 0.659198 1:+11406502 MsG0180000805.01.T01:CDS
GTCGTCATTGGATAAAGTTG+AGG 0.661891 1:-11403981 None:intergenic
TGAAGCACGAGACCGGACAA+CGG 0.661961 1:-11403639 None:intergenic
TTCCATTCCAACCATCCGTG+TGG 0.662635 1:-11406887 None:intergenic
AATTCATCTCTGGTTCGTCG+TGG 0.663674 1:+11407050 MsG0180000805.01.T01:CDS
ATTATCGTTTCAAAGAGTGG+TGG 0.668691 1:+11404346 MsG0180000805.01.T01:CDS
TGAACCAGGGAAATCTAGGA+GGG 0.669551 1:-11403756 None:intergenic
CAGAAGCTGATGTTGAACCA+GGG 0.672245 1:-11403769 None:intergenic
CAATGTCGCTGGATCAACTG+AGG 0.678105 1:+11404024 MsG0180000805.01.T01:CDS
TGTCGGATCCGATCACGCGG+TGG 0.679356 1:+11406505 MsG0180000805.01.T01:CDS
GTGATCGGATCCGACACGGA+GGG 0.681578 1:-11406498 None:intergenic
ATCATGTGCATCCACACGGA+TGG 0.683808 1:+11406876 MsG0180000805.01.T01:CDS
GATAACCAACAATATTGCAG+CGG 0.704577 1:-11406532 None:intergenic
CTTGGACCGTCTGATCCTGG+TGG 0.704926 1:+11403476 MsG0180000805.01.T01:CDS
GACTGTATACGAGAGACCTG+AGG 0.711774 1:-11403858 None:intergenic
GGTGATCATGTGCATCCACA+CGG 0.715428 1:+11406872 MsG0180000805.01.T01:CDS
ATTTACCAAAGGAAGCAGTG+TGG 0.718446 1:-11405235 None:intergenic
GGGGCAAAACTGTCATCACA+GGG 0.718466 1:+11405180 MsG0180000805.01.T01:CDS
GGCGGAGGCGATGATCAAGG+CGG 0.725557 1:-11403597 None:intergenic
TCAACTTTATCCAATGACGA+CGG 0.731603 1:+11403983 MsG0180000805.01.T01:CDS
TGTATACGAGAGACCTGAGG+AGG 0.740153 1:-11403855 None:intergenic
CGTGATCGGATCCGACACGG+AGG 0.752952 1:-11406499 None:intergenic
ATGCAACATTTATGGCACGG+TGG 0.757898 1:+11406598 MsG0180000805.01.T01:CDS
TGGACCGGAGAAGCACCAAG+CGG 0.778784 1:+11406472 MsG0180000805.01.T01:CDS
GGAGGCCAATAGATACACCG+TGG 0.803067 1:+11407024 MsG0180000805.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTTTTTAATAGTTTTTTTT+TGG + Chr1:11404554-11404573 MsG0180000805.01.T01:intron 10.0%
!!! TAATTATGTTTTTTTATCTA+AGG + Chr1:11404824-11404843 MsG0180000805.01.T01:intron 10.0%
!! AAAACCAATATTATGTTTAT+AGG + Chr1:11405149-11405168 MsG0180000805.01.T01:CDS 15.0%
!! CAATATTCAATATTTCATAA+TGG + Chr1:11403442-11403461 MsG0180000805.01.T01:exon 15.0%
!! TATAACTAAAATATACATTG+AGG + Chr1:11403157-11403176 MsG0180000805.01.T01:five_prime_UTR 15.0%
!!! CAATGTATATTTTAGTTATA+TGG - Chr1:11403157-11403176 None:intergenic 15.0%
!!! TTTTTTTGAAGAACTATATA+TGG - Chr1:11405811-11405830 None:intergenic 15.0%
!! AAAAGACATGTCATAAAAAA+AGG + Chr1:11403180-11403199 MsG0180000805.01.T01:five_prime_UTR 20.0%
!! AAACAATTGAGAAAAATTCT+TGG - Chr1:11406175-11406194 None:intergenic 20.0%
!! AAATATTGAATATTGTAGTG+AGG - Chr1:11403437-11403456 None:intergenic 20.0%
!! AAATGAAAATGCAAGTTATT+AGG - Chr1:11403324-11403343 None:intergenic 20.0%
!! AACAATTGAGAAAAATTCTT+GGG - Chr1:11406174-11406193 None:intergenic 20.0%
!! AATAATCAAAGCATATGAAA+AGG - Chr1:11405262-11405281 None:intergenic 20.0%
!! AATAGTTGCAAATACTTAAA+CGG - Chr1:11405559-11405578 None:intergenic 20.0%
!! AATATTATGTTTATAGGAGA+TGG + Chr1:11405155-11405174 MsG0180000805.01.T01:CDS 20.0%
!! ACAGGTTAATGTTATATATT+TGG + Chr1:11404983-11405002 MsG0180000805.01.T01:intron 20.0%
!! ATATTATGTTTATAGGAGAT+GGG + Chr1:11405156-11405175 MsG0180000805.01.T01:CDS 20.0%
!! ATCCTTTCTATATATATTTG+TGG - Chr1:11407127-11407146 None:intergenic 20.0%
!! ATCTCCTATAAACATAATAT+TGG - Chr1:11405156-11405175 None:intergenic 20.0%
!! GAACTATAATTAAAGTAGAA+AGG - Chr1:11405785-11405804 None:intergenic 20.0%
!! GATTATAGTGATGAATTTAT+AGG + Chr1:11404935-11404954 MsG0180000805.01.T01:intron 20.0%
!! GTATGAAGAGAATAATTTAA+AGG + Chr1:11405115-11405134 MsG0180000805.01.T01:CDS 20.0%
!! TAATAATTAATGTGAAGTGA+AGG + Chr1:11404729-11404748 MsG0180000805.01.T01:intron 20.0%
!! TAGATTTATAATTTACGTGA+GGG + Chr1:11404429-11404448 MsG0180000805.01.T01:CDS 20.0%
!! TCCAATAAAGTCAAAATATT+CGG + Chr1:11404910-11404929 MsG0180000805.01.T01:intron 20.0%
!! TGATTGATTAATGTTAAGTA+GGG - Chr1:11405974-11405993 None:intergenic 20.0%
!! TTGATTGATTAATGTTAAGT+AGG - Chr1:11405975-11405994 None:intergenic 20.0%
!! TTTCATATGCTTTGATTATT+TGG + Chr1:11405262-11405281 MsG0180000805.01.T01:intron 20.0%
!!! ATCTAACTTTTTAATTGATG+GGG + Chr1:11405083-11405102 MsG0180000805.01.T01:intron 20.0%
!!! ATTTATCACTGTTTTCTTTT+TGG + Chr1:11404483-11404502 MsG0180000805.01.T01:intron 20.0%
!!! GATCTAACTTTTTAATTGAT+GGG + Chr1:11405082-11405101 MsG0180000805.01.T01:intron 20.0%
!!! GCTTTAAAAACTTTGTATTA+TGG + Chr1:11406920-11406939 MsG0180000805.01.T01:CDS 20.0%
!!! TGATCTAACTTTTTAATTGA+TGG + Chr1:11405081-11405100 MsG0180000805.01.T01:intron 20.0%
!!! TTATTATTGGTGTTAGAAAA+AGG + Chr1:11404655-11404674 MsG0180000805.01.T01:intron 20.0%
!!! TTCTATGCACTTTTATAATT+TGG + Chr1:11405299-11405318 MsG0180000805.01.T01:intron 20.0%
! AAAAATTTAGACCCTCTATT+TGG - Chr1:11406144-11406163 None:intergenic 25.0%
! AAGAGAATAATTTAAAGGTG+GGG + Chr1:11405120-11405139 MsG0180000805.01.T01:CDS 25.0%
! AAGCATAAATTATTCGTTGT+GGG + Chr1:11406270-11406289 MsG0180000805.01.T01:intron 25.0%
! ATGGAATCAATATATAGAAG+AGG - Chr1:11403230-11403249 None:intergenic 25.0%
! ATTGAAGAATATGACATTGT+AGG - Chr1:11406323-11406342 None:intergenic 25.0%
! CAAGAAGTGAATGATTATTT+AGG - Chr1:11405923-11405942 None:intergenic 25.0%
! CACCACAAATATATATAGAA+AGG + Chr1:11407122-11407141 MsG0180000805.01.T01:three_prime_UTR 25.0%
! CTTTCTATATATATTTGTGG+TGG - Chr1:11407124-11407143 None:intergenic 25.0%
! GAAGAGAATAATTTAAAGGT+GGG + Chr1:11405119-11405138 MsG0180000805.01.T01:CDS 25.0%
! GTAGATTTATAATTTACGTG+AGG + Chr1:11404428-11404447 MsG0180000805.01.T01:CDS 25.0%
! GTATATATGTTGTCCTATAT+GGG + Chr1:11406851-11406870 MsG0180000805.01.T01:CDS 25.0%
! GTTATATATTTGGTCAACTA+TGG + Chr1:11404993-11405012 MsG0180000805.01.T01:intron 25.0%
! TAAGTTATAGTGTACTTACT+TGG + Chr1:11405518-11405537 MsG0180000805.01.T01:intron 25.0%
! TATGAAAAGGAATTTACCAA+AGG - Chr1:11405249-11405268 None:intergenic 25.0%
! TGAAGAGAATAATTTAAAGG+TGG + Chr1:11405118-11405137 MsG0180000805.01.T01:CDS 25.0%
! TGGTAACTTAAAAGATTTGT+CGG + Chr1:11404141-11404160 MsG0180000805.01.T01:CDS 25.0%
! TGTATATATGTTGTCCTATA+TGG + Chr1:11406850-11406869 MsG0180000805.01.T01:CDS 25.0%
! TTATGCTTGCTTATTTGATT+TGG - Chr1:11406258-11406277 None:intergenic 25.0%
!! TATAACAACTTTGACTTTGA+GGG - Chr1:11407339-11407358 None:intergenic 25.0%
!! TGTAATAGTGTTCTTTTGTT+GGG - Chr1:11406690-11406709 None:intergenic 25.0%
!! TTTGTTAATTTTACCCCAAA+AGG + Chr1:11405726-11405745 MsG0180000805.01.T01:intron 25.0%
!!! ACCGAATATTTTGACTTTAT+TGG - Chr1:11404914-11404933 None:intergenic 25.0%
!!! AGAATGTTTTGTTACCTTTT+GGG - Chr1:11405743-11405762 None:intergenic 25.0%
!!! TAGAATGTTTTGTTACCTTT+TGG - Chr1:11405744-11405763 None:intergenic 25.0%
!!! TGGTAGTTCTTTTTAGTAAA+AGG + Chr1:11404503-11404522 MsG0180000805.01.T01:intron 25.0%
AAAGTCTACTTCAGTTATCT+CGG - Chr1:11404539-11404558 None:intergenic 30.0%
AATATTGTAGTGAGGATTTG+AGG - Chr1:11403429-11403448 None:intergenic 30.0%
AATTGAGAAAAATTCTTGGG+TGG - Chr1:11406171-11406190 None:intergenic 30.0%
ACAGAACAAGAGAAGATTAA+TGG + Chr1:11404231-11404250 MsG0180000805.01.T01:CDS 30.0%
AGCGTTACTAAGGTTAAAAA+TGG + Chr1:11405849-11405868 MsG0180000805.01.T01:intron 30.0%
AGTCGGTGATGAATTATTAT+TGG + Chr1:11404642-11404661 MsG0180000805.01.T01:intron 30.0%
ATGAGTGTGTGACTAAATAA+AGG - Chr1:11406036-11406055 None:intergenic 30.0%
ATGTTAAGTAGGGAGTAATA+TGG - Chr1:11405964-11405983 None:intergenic 30.0%
ATTATTGAGTTTACCGGTAT+CGG + Chr1:11404309-11404328 MsG0180000805.01.T01:CDS 30.0%
CAAGCATAAATTATTCGTTG+TGG + Chr1:11406269-11406288 MsG0180000805.01.T01:intron 30.0%
CAGAACAAGAGAAGATTAAT+GGG + Chr1:11404232-11404251 MsG0180000805.01.T01:CDS 30.0%
GAAAATGCAAGTTATTAGGT+TGG - Chr1:11403320-11403339 None:intergenic 30.0%
GATATTATCGTTTCAAAGAG+TGG + Chr1:11404343-11404362 MsG0180000805.01.T01:CDS 30.0%
GTATATCCATTCATGATTGT+CGG + Chr1:11406744-11406763 MsG0180000805.01.T01:CDS 30.0%
GTGTACTTGTAGTAGTTAAA+AGG + Chr1:11405049-11405068 MsG0180000805.01.T01:intron 30.0%
TAGGAGATTATTGAGTTTAC+CGG + Chr1:11404303-11404322 MsG0180000805.01.T01:CDS 30.0%
TGAGTGTGTGACTAAATAAA+GGG - Chr1:11406035-11406054 None:intergenic 30.0%
TGATGAATTTATAGGAGAAC+TGG + Chr1:11404943-11404962 MsG0180000805.01.T01:intron 30.0%
TGTTAGTTAGTTATGATGAG+AGG - Chr1:11403396-11403415 None:intergenic 30.0%
! AGTGGAGATAATGATTTTAC+TGG + Chr1:11404199-11404218 MsG0180000805.01.T01:CDS 30.0%
! ATAACAACTTTGACTTTGAG+GGG - Chr1:11407338-11407357 None:intergenic 30.0%
! ATGGTGAGTACATGAATTTT+GGG + Chr1:11406939-11406958 MsG0180000805.01.T01:CDS 30.0%
! CTATAACAACTTTGACTTTG+AGG - Chr1:11407340-11407359 None:intergenic 30.0%
! CTGTAATAGTGTTCTTTTGT+TGG - Chr1:11406691-11406710 None:intergenic 30.0%
! TATGGTGAGTACATGAATTT+TGG + Chr1:11406938-11406957 MsG0180000805.01.T01:CDS 30.0%
! TTAATTGATGGGGAATTTTC+AGG + Chr1:11405093-11405112 MsG0180000805.01.T01:intron 30.0%
! TTGCCCAAAAACAATGTTTT+GGG - Chr1:11407234-11407253 None:intergenic 30.0%
! TTTGCCCAAAAACAATGTTT+TGG - Chr1:11407235-11407254 None:intergenic 30.0%
!! AGTTCTAAATAGCGTTACTA+AGG + Chr1:11405839-11405858 MsG0180000805.01.T01:intron 30.0%
!! ATAATGGACTTTGATAGACT+TGG + Chr1:11403458-11403477 MsG0180000805.01.T01:exon 30.0%
!! GAATGTTTTGTTACCTTTTG+GGG - Chr1:11405742-11405761 None:intergenic 30.0%
!! TGTCCCAAAACATTGTTTTT+GGG + Chr1:11407228-11407247 MsG0180000805.01.T01:three_prime_UTR 30.0%
!!! ATATACCCGTATTTTGATTC+GGG - Chr1:11406730-11406749 None:intergenic 30.0%
!!! ATGAGCTTCTTGTTGTTTTT+TGG - Chr1:11403557-11403576 None:intergenic 30.0%
!!! GATATACCCGTATTTTGATT+CGG - Chr1:11406731-11406750 None:intergenic 30.0%
AAAGACCCGAATCAAAATAC+GGG + Chr1:11406722-11406741 MsG0180000805.01.T01:CDS 35.0%
AACCTGTATTGCACGTAATT+TGG - Chr1:11404970-11404989 None:intergenic 35.0%
ACACTACATAATTGCTGTGA+CGG + Chr1:11404608-11404627 MsG0180000805.01.T01:intron 35.0%
ACACTATTACAGCCCAAAAT+AGG + Chr1:11406699-11406718 MsG0180000805.01.T01:CDS 35.0%
AGTTGCAAATACTTAAACGG+TGG - Chr1:11405556-11405575 None:intergenic 35.0%
AGTTTACAAACCGCATTATG+TGG - Chr1:11405662-11405681 None:intergenic 35.0%
ATCAATTGTTGAGCAACTCT+TGG + Chr1:11405990-11406009 MsG0180000805.01.T01:intron 35.0%
ATTATCGTTTCAAAGAGTGG+TGG + Chr1:11404346-11404365 MsG0180000805.01.T01:CDS 35.0%
ATTGTTCTTCCCACATAATG+CGG + Chr1:11405649-11405668 MsG0180000805.01.T01:intron 35.0%
GAAAGACCCGAATCAAAATA+CGG + Chr1:11406721-11406740 MsG0180000805.01.T01:CDS 35.0%
GAGGAGGTTTGAATTATTGT+TGG - Chr1:11403666-11403685 None:intergenic 35.0%
GATAACCAACAATATTGCAG+CGG - Chr1:11406535-11406554 None:intergenic 35.0%
GTCCATGGAAAATGTATTCT+AGG + Chr1:11406825-11406844 MsG0180000805.01.T01:CDS 35.0%
GTTGCAAATACTTAAACGGT+GGG - Chr1:11405555-11405574 None:intergenic 35.0%
GTTTACAAACCGCATTATGT+GGG - Chr1:11405661-11405680 None:intergenic 35.0%
TAAGTAGGGAGTAATATGGT+AGG - Chr1:11405960-11405979 None:intergenic 35.0%
TATGTGTGTGACCAAATAGA+GGG + Chr1:11406130-11406149 MsG0180000805.01.T01:intron 35.0%
TATGTTTATAGGAGATGGGA+GGG + Chr1:11405160-11405179 MsG0180000805.01.T01:CDS 35.0%
TCAACTTTATCCAATGACGA+CGG + Chr1:11403983-11404002 MsG0180000805.01.T01:CDS 35.0%
TCAATTGTTGAGCAACTCTT+GGG + Chr1:11405991-11406010 MsG0180000805.01.T01:intron 35.0%
TCCATCTAATGTGCAATACT+TGG + Chr1:11403245-11403264 MsG0180000805.01.T01:five_prime_UTR 35.0%
TCTCTACTTTCACAGTCAAA+AGG + Chr1:11405681-11405700 MsG0180000805.01.T01:intron 35.0%
TGAATGCAACATTTATGGCA+CGG + Chr1:11406595-11406614 MsG0180000805.01.T01:CDS 35.0%
TGCATTCACGGAAAAATTGA+CGG - Chr1:11406583-11406602 None:intergenic 35.0%
TGCCATAAATGTTGCATTCA+CGG - Chr1:11406595-11406614 None:intergenic 35.0%
TGCTCTATTATATCGTGCAT+GGG - Chr1:11405409-11405428 None:intergenic 35.0%
TGGTTTCTGATGTGTTTGTT+TGG - Chr1:11403137-11403156 None:intergenic 35.0%
TGTCTAAGTAATTAGCTAGC+TGG - Chr1:11403286-11403305 None:intergenic 35.0%
TTATGTGTGTGACCAAATAG+AGG + Chr1:11406129-11406148 MsG0180000805.01.T01:intron 35.0%
TTATGTTTATAGGAGATGGG+AGG + Chr1:11405159-11405178 MsG0180000805.01.T01:CDS 35.0%
TTCCGTGAATGCAACATTTA+TGG + Chr1:11406590-11406609 MsG0180000805.01.T01:CDS 35.0%
TTTATAATTTACGTGAGGGC+AGG + Chr1:11404433-11404452 MsG0180000805.01.T01:CDS 35.0%
! AGAGTGCTTTGCTTATATGA+CGG - Chr1:11403832-11403851 None:intergenic 35.0%
! ATTCGGGTCTTTCCTATTTT+GGG - Chr1:11406714-11406733 None:intergenic 35.0%
! CTGTCCCAAAACATTGTTTT+TGG + Chr1:11407227-11407246 MsG0180000805.01.T01:three_prime_UTR 35.0%
! GGCAGCATTGAAACATATTT+GGG + Chr1:11406800-11406819 MsG0180000805.01.T01:CDS 35.0%
! GTCCTAGAATACATTTTCCA+TGG - Chr1:11406830-11406849 None:intergenic 35.0%
! TAACAACTTTGACTTTGAGG+GGG - Chr1:11407337-11407356 None:intergenic 35.0%
! TCCAAGTATTGCACATTAGA+TGG - Chr1:11403249-11403268 None:intergenic 35.0%
! TGAAGCTATTAAGAAAGCAC+CGG + Chr1:11404393-11404412 MsG0180000805.01.T01:CDS 35.0%
!! TTTTGGAGAGGAATTTGATG+TGG - Chr1:11403540-11403559 None:intergenic 35.0%
!!! CTTCTTGTTGTTTTTTGGAG+AGG - Chr1:11403552-11403571 None:intergenic 35.0%
AAACATATTTGGGTCGTCCA+TGG + Chr1:11406810-11406829 MsG0180000805.01.T01:CDS 40.0%
AAACCAAGATACGTGTTTGG+AGG + Chr1:11404078-11404097 MsG0180000805.01.T01:CDS 40.0%
AACCAAGATACGTGTTTGGA+GGG + Chr1:11404079-11404098 MsG0180000805.01.T01:CDS 40.0%
AATCTACGATGACTATGCTC+CGG - Chr1:11404415-11404434 None:intergenic 40.0%
ACCAACCATCTGATCCTTAA+CGG - Chr1:11404125-11404144 None:intergenic 40.0%
AGAGCAGTGCAAATTACACA+TGG + Chr1:11405423-11405442 MsG0180000805.01.T01:intron 40.0%
AGTCCAAACCAACCTCAATT+GGG + Chr1:11407161-11407180 MsG0180000805.01.T01:three_prime_UTR 40.0%
ATGCACATGATCACCCATAT+AGG - Chr1:11406867-11406886 None:intergenic 40.0%
ATGTTGAACCAGGGAAATCT+AGG - Chr1:11403763-11403782 None:intergenic 40.0%
ATGTTTATAGGAGATGGGAG+GGG + Chr1:11405161-11405180 MsG0180000805.01.T01:CDS 40.0%
ATTACATTCGAGAACTACGC+TGG + Chr1:11406452-11406471 MsG0180000805.01.T01:CDS 40.0%
ATTGGATAAAGTTGAGGACG+TGG - Chr1:11403978-11403997 None:intergenic 40.0%
ATTTACCAAAGGAAGCAGTG+TGG - Chr1:11405238-11405257 None:intergenic 40.0%
CATTTATGCACGTAAACCCA+TGG + Chr1:11406664-11406683 MsG0180000805.01.T01:CDS 40.0%
CCACAGTTGAAGTAATAACC+CGG - Chr1:11407006-11407025 None:intergenic 40.0%
CGAGGATTGTCTTGAACTAA+TGG + Chr1:11403907-11403926 MsG0180000805.01.T01:CDS 40.0%
CTACAAGTACACACAAGCAA+AGG - Chr1:11405041-11405060 None:intergenic 40.0%
CTGCTCTATTATATCGTGCA+TGG - Chr1:11405410-11405429 None:intergenic 40.0%
GACAAACCAAGATACGTGTT+TGG + Chr1:11404075-11404094 MsG0180000805.01.T01:CDS 40.0%
GGTTATTACTTCAACTGTGG+AGG + Chr1:11407006-11407025 MsG0180000805.01.T01:CDS 40.0%
GTCCAAATTACGTGCAATAC+AGG + Chr1:11404965-11404984 MsG0180000805.01.T01:intron 40.0%
GTCGTCATTGGATAAAGTTG+AGG - Chr1:11403984-11404003 None:intergenic 40.0%
GTTTCAAAGAGTGGTGGTAA+TGG + Chr1:11404352-11404371 MsG0180000805.01.T01:CDS 40.0%
TAGGATCCGACAATCATGAA+TGG - Chr1:11406753-11406772 None:intergenic 40.0%
TAGTCCAAACCAACCTCAAT+TGG + Chr1:11407160-11407179 MsG0180000805.01.T01:three_prime_UTR 40.0%
TTCACGGAAAAATTGACGGT+TGG - Chr1:11406579-11406598 None:intergenic 40.0%
! ATCACAGGGAAAAGAAGTGT+TGG + Chr1:11405194-11405213 MsG0180000805.01.T01:CDS 40.0%
! CATGGCATGAATCTAGAGTT+TGG + Chr1:11405441-11405460 MsG0180000805.01.T01:intron 40.0%
! GATTCGGGTCTTTCCTATTT+TGG - Chr1:11406715-11406734 None:intergenic 40.0%
! GGGCAGCATTGAAACATATT+TGG + Chr1:11406799-11406818 MsG0180000805.01.T01:CDS 40.0%
! TATTTGTGGTGGTGATCAAG+TGG - Chr1:11407113-11407132 None:intergenic 40.0%
! TGAGTACATGAATTTTGGGC+CGG + Chr1:11406943-11406962 MsG0180000805.01.T01:CDS 40.0%
!! AAAGAGTGGTGGTAATGGTA+CGG + Chr1:11404357-11404376 MsG0180000805.01.T01:CDS 40.0%
!! AGGGAGTTGATACAAAGTGA+AGG - Chr1:11403740-11403759 None:intergenic 40.0%
!! GGCACGGTGGATTTTATATT+TGG + Chr1:11406611-11406630 MsG0180000805.01.T01:CDS 40.0%
!! GGGAGTTGATACAAAGTGAA+GGG - Chr1:11403739-11403758 None:intergenic 40.0%
!! TTGCTTGAGTTGGTTTGGAA+TGG - Chr1:11403688-11403707 None:intergenic 40.0%
!!! ATCTAGTTTTGCTGCAGGTT+CGG - Chr1:11403715-11403734 None:intergenic 40.0%
AAAGGAAGCAGTGTGGAAAG+TGG - Chr1:11405231-11405250 None:intergenic 45.0%
ACCAGAGATGAATTGAGCCA+CGG - Chr1:11407044-11407063 None:intergenic 45.0%
ACCGTTAAGGATCAGATGGT+TGG + Chr1:11404121-11404140 MsG0180000805.01.T01:CDS 45.0%
ACTTTCCACACTGCTTCCTT+TGG + Chr1:11405230-11405249 MsG0180000805.01.T01:CDS 45.0%
AGACAATTCTCCAATGTCGC+TGG + Chr1:11404013-11404032 MsG0180000805.01.T01:CDS 45.0%
AGAGGAATTTGATGTGGTGG+AGG - Chr1:11403534-11403553 None:intergenic 45.0%
AGTGGCTTCAGATACGAGAT+AGG + Chr1:11404284-11404303 MsG0180000805.01.T01:CDS 45.0%
ATGCAACATTTATGGCACGG+TGG + Chr1:11406598-11406617 MsG0180000805.01.T01:CDS 45.0%
ATTGTTGAGCAACTCTTGGG+TGG + Chr1:11405994-11406013 MsG0180000805.01.T01:intron 45.0%
CAGAAGCTGATGTTGAACCA+GGG - Chr1:11403772-11403791 None:intergenic 45.0%
CCGGGTTATTACTTCAACTG+TGG + Chr1:11407003-11407022 MsG0180000805.01.T01:CDS 45.0%
CTACATAATTGCTGTGACGG+TGG + Chr1:11404611-11404630 MsG0180000805.01.T01:intron 45.0%
GAAGTAATAACCCGGTATCC+AGG - Chr1:11406998-11407017 None:intergenic 45.0%
GGATGATCTGATAGCATCCA+TGG - Chr1:11403939-11403958 None:intergenic 45.0%
GGATGCTATCAGATCATCCA+TGG + Chr1:11403940-11403959 MsG0180000805.01.T01:CDS 45.0%
GTCCAAACCAACCTCAATTG+GGG + Chr1:11407162-11407181 MsG0180000805.01.T01:three_prime_UTR 45.0%
GTGTACCGCTGCAATATTGT+TGG + Chr1:11406527-11406546 MsG0180000805.01.T01:CDS 45.0%
TAATTTACGTGAGGGCAGGA+AGG + Chr1:11404437-11404456 MsG0180000805.01.T01:CDS 45.0%
TCAGAAGCTGATGTTGAACC+AGG - Chr1:11403773-11403792 None:intergenic 45.0%
TCAGCTTGTATCTCCGATAC+CGG - Chr1:11404325-11404344 None:intergenic 45.0%
TCCAAACCAACCTCAATTGG+GGG + Chr1:11407163-11407182 MsG0180000805.01.T01:three_prime_UTR 45.0%
TCTCGCGAGAATTTCCTAAG+TGG + Chr1:11404266-11404285 MsG0180000805.01.T01:CDS 45.0%
TCTTGATTCTCCGTCGTCAT+TGG - Chr1:11403996-11404015 None:intergenic 45.0%
TGAACCAGGGAAATCTAGGA+GGG - Chr1:11403759-11403778 None:intergenic 45.0%
TGACGGTGGTGATATTGAGT+CGG + Chr1:11404625-11404644 MsG0180000805.01.T01:intron 45.0%
TGGAGAGGAATTTGATGTGG+TGG - Chr1:11403537-11403556 None:intergenic 45.0%
TGGTGATCAAGTGGATAACC+CGG - Chr1:11407104-11407123 None:intergenic 45.0%
TTACTTGATGCAGCTGCTAG+TGG + Chr1:11406407-11406426 MsG0180000805.01.T01:intron 45.0%
TTCAATGCTGCCCTTTGATG+AGG - Chr1:11406792-11406811 None:intergenic 45.0%
TTGAACCAGGGAAATCTAGG+AGG - Chr1:11403760-11403779 None:intergenic 45.0%
TTGAGCCACGGTGTATCTAT+TGG - Chr1:11407032-11407051 None:intergenic 45.0%
! AATTCATCTCTGGTTCGTCG+TGG + Chr1:11407050-11407069 MsG0180000805.01.T01:CDS 45.0%
! AGTGTTCTTTTGTTGGGCCA+TGG - Chr1:11406684-11406703 None:intergenic 45.0%
! GAGGAATTTGATGTGGTGGA+GGG - Chr1:11403533-11403552 None:intergenic 45.0%
! GAGTACATGAATTTTGGGCC+GGG + Chr1:11406944-11406963 MsG0180000805.01.T01:CDS 45.0%
! GTGTTCTTTTGTTGGGCCAT+GGG - Chr1:11406683-11406702 None:intergenic 45.0%
! TCTCGTATCTGAAGCCACTT+AGG - Chr1:11404283-11404302 None:intergenic 45.0%
! TGAACTAATGGACGAGTCCA+TGG + Chr1:11403919-11403938 MsG0180000805.01.T01:CDS 45.0%
!! CGTATCTTGGTTTGTCAGTG+CGG - Chr1:11404071-11404090 None:intergenic 45.0%
!! CTTGAGTTGGTTTGGAATGG+AGG - Chr1:11403685-11403704 None:intergenic 45.0%
!! GGAGATTGCTTGAGTTGGTT+TGG - Chr1:11403693-11403712 None:intergenic 45.0%
!! GGGAAAAGAAGTGTTGGAGA+TGG + Chr1:11405200-11405219 MsG0180000805.01.T01:CDS 45.0%
!!! AGGGTATCTAGTTTTGCTGC+AGG - Chr1:11403720-11403739 None:intergenic 45.0%
!!! TCTAGTTTTGCTGCAGGTTC+GGG - Chr1:11403714-11403733 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAGAAAA+AGG + Chr1:11404691-11404710 MsG0180000805.01.T01:intron 5.0%
AAAAATGCCACTCCGGTGGA+CGG - Chr1:11407079-11407098 None:intergenic 50.0%
AACTCCCTCCTAGATTTCCC+TGG + Chr1:11403752-11403771 MsG0180000805.01.T01:CDS 50.0%
AAGTTGAGGACGTGGTCATG+AGG - Chr1:11403970-11403989 None:intergenic 50.0%
ACCGTGGCTCAATTCATCTC+TGG + Chr1:11407040-11407059 MsG0180000805.01.T01:CDS 50.0%
AGACACAAGCGGTACCGTTA+AGG + Chr1:11404108-11404127 MsG0180000805.01.T01:CDS 50.0%
AGCCCTCCAAACACGTATCT+TGG - Chr1:11404084-11404103 None:intergenic 50.0%
AGGGGCAAAACTGTCATCAC+AGG + Chr1:11405179-11405198 MsG0180000805.01.T01:CDS 50.0%
AGTTGAGGACGTGGTCATGA+GGG - Chr1:11403969-11403988 None:intergenic 50.0%
ATCATGTGCATCCACACGGA+TGG + Chr1:11406876-11406895 MsG0180000805.01.T01:CDS 50.0%
ATCCACACGGATGGTTGGAA+TGG + Chr1:11406885-11406904 MsG0180000805.01.T01:CDS 50.0%
ATGTTCCCCCCAATTGAGGT+TGG - Chr1:11407172-11407191 None:intergenic 50.0%
ATTCGAGAACTACGCTGGAC+CGG + Chr1:11406457-11406476 MsG0180000805.01.T01:CDS 50.0%
CAACTGAGGACGTGATGACA+TGG + Chr1:11404038-11404057 MsG0180000805.01.T01:CDS 50.0%
CAATGTCGCTGGATCAACTG+AGG + Chr1:11404024-11404043 MsG0180000805.01.T01:CDS 50.0%
CACGGATGGTTGGAATGGAA+TGG + Chr1:11406890-11406909 MsG0180000805.01.T01:CDS 50.0%
CCAAACCAACCTCAATTGGG+GGG + Chr1:11407164-11407183 MsG0180000805.01.T01:three_prime_UTR 50.0%
CCATATGTTCCCCCCAATTG+AGG - Chr1:11407176-11407195 None:intergenic 50.0%
CCCTTTGATGAGGCTAGATC+CGG - Chr1:11406782-11406801 None:intergenic 50.0%
CCGGATCTAGCCTCATCAAA+GGG + Chr1:11406779-11406798 MsG0180000805.01.T01:CDS 50.0%
CCTCAATTGGGGGGAACATA+TGG + Chr1:11407173-11407192 MsG0180000805.01.T01:three_prime_UTR 50.0%
CCTTTGATGAGGCTAGATCC+GGG - Chr1:11406781-11406800 None:intergenic 50.0%
CGGTACCGTTAAGGATCAGA+TGG + Chr1:11404117-11404136 MsG0180000805.01.T01:CDS 50.0%
CTCAGTTGATCCAGCGACAT+TGG - Chr1:11404026-11404045 None:intergenic 50.0%
CTTTGATGAGGCTAGATCCG+GGG - Chr1:11406780-11406799 None:intergenic 50.0%
GACAATCCTCGTATGCAGCA+CGG - Chr1:11403898-11403917 None:intergenic 50.0%
GACTGTATACGAGAGACCTG+AGG - Chr1:11403861-11403880 None:intergenic 50.0%
GGGGCAAAACTGTCATCACA+GGG + Chr1:11405180-11405199 MsG0180000805.01.T01:CDS 50.0%
GGTGATCATGTGCATCCACA+CGG + Chr1:11406872-11406891 MsG0180000805.01.T01:CDS 50.0%
GTTCGGGAGATTGCTTGAGT+TGG - Chr1:11403698-11403717 None:intergenic 50.0%
TGTATACGAGAGACCTGAGG+AGG - Chr1:11403858-11403877 None:intergenic 50.0%
TGTTGGATGAAGCACGAGAC+CGG - Chr1:11403649-11403668 None:intergenic 50.0%
TTCCATTCCAACCATCCGTG+TGG - Chr1:11406890-11406909 None:intergenic 50.0%
! CTCGCGATATTTTCAGCGAG+TGG + Chr1:11404181-11404200 MsG0180000805.01.T01:CDS 50.0%
!! GAGGGCTTTGAAGACACAAG+CGG + Chr1:11404097-11404116 MsG0180000805.01.T01:CDS 50.0%
!! GAGTTGGTTTGGAATGGAGG+AGG - Chr1:11403682-11403701 None:intergenic 50.0%
AGACTTGGACCGTCTGATCC+TGG + Chr1:11403473-11403492 MsG0180000805.01.T01:CDS 55.0%
ATGCAGCTGCTAGTGGTCCT+GGG + Chr1:11406414-11406433 MsG0180000805.01.T01:intron 55.0%
ATGTCACGTGCCATGAACCC+AGG - Chr1:11406434-11406453 None:intergenic 55.0%
CCCGGATCTAGCCTCATCAA+AGG + Chr1:11406778-11406797 MsG0180000805.01.T01:CDS 55.0%
CGTATACAGTCGCGAACCCA+CGG + Chr1:11403870-11403889 MsG0180000805.01.T01:CDS 55.0%
GGAGGCCAATAGATACACCG+TGG + Chr1:11407024-11407043 MsG0180000805.01.T01:CDS 55.0%
GGGTCAAATGGCCTGGATAC+CGG + Chr1:11406984-11407003 MsG0180000805.01.T01:CDS 55.0%
GGTCAAATGGCCTGGATACC+GGG + Chr1:11406985-11407004 MsG0180000805.01.T01:CDS 55.0%
GTATACAGTCGCGAACCCAC+GGG + Chr1:11403871-11403890 MsG0180000805.01.T01:CDS 55.0%
TGAAGCACGAGACCGGACAA+CGG - Chr1:11403642-11403661 None:intergenic 55.0%
TGCTAGTGGTCCTGGGTTCA+TGG + Chr1:11406421-11406440 MsG0180000805.01.T01:CDS 55.0%
TGTGCATCCACACGGATGGT+TGG + Chr1:11406880-11406899 MsG0180000805.01.T01:CDS 55.0%
! AAAGCACTCTTCGCCTCCTC+AGG + Chr1:11403842-11403861 MsG0180000805.01.T01:CDS 55.0%
! CCCCCCAATTGAGGTTGGTT+TGG - Chr1:11407167-11407186 None:intergenic 55.0%
! CTGCACTGATCACCGTTGTC+CGG + Chr1:11403627-11403646 MsG0180000805.01.T01:CDS 55.0%
! GTCCACCGGAGTGGCATTTT+TGG + Chr1:11407078-11407097 MsG0180000805.01.T01:CDS 55.0%
! TTAGAGGTGCGGTGGATCGA+CGG - Chr1:11403508-11403527 None:intergenic 55.0%
!! GATGTGGTGGAGGGTGTTAG+AGG - Chr1:11403524-11403543 None:intergenic 55.0%
!!! ACCGGAGTGGCATTTTTGGC+CGG + Chr1:11407082-11407101 MsG0180000805.01.T01:CDS 55.0%
CCCGGCCAAAAATGCCACTC+CGG - Chr1:11407086-11407105 None:intergenic 60.0%
CGTGGTCATGAGGGAGTCCA+TGG - Chr1:11403960-11403979 None:intergenic 60.0%
CTATCGGGCAGCGGGTCAAA+TGG + Chr1:11406972-11406991 MsG0180000805.01.T01:CDS 60.0%
CTTGGACCGTCTGATCCTGG+TGG + Chr1:11403476-11403495 MsG0180000805.01.T01:CDS 60.0%
GAGGAGCCACCAGGATCAGA+CGG - Chr1:11403485-11403504 None:intergenic 60.0%
GATCAGTGCAGCCGAGATGG+CGG - Chr1:11403618-11403637 None:intergenic 60.0%
GATCATCGCCTCCGCCATCT+CGG + Chr1:11403604-11403623 MsG0180000805.01.T01:CDS 60.0%
GATGCAGCTGCTAGTGGTCC+TGG + Chr1:11406413-11406432 MsG0180000805.01.T01:intron 60.0%
GGCCAAAAATGCCACTCCGG+TGG - Chr1:11407083-11407102 None:intergenic 60.0%
GGTGATCAGTGCAGCCGAGA+TGG - Chr1:11403621-11403640 None:intergenic 60.0%
GTGATCGGATCCGACACGGA+GGG - Chr1:11406501-11406520 None:intergenic 60.0%
TCGTCGTGGTTACCGTCCAC+CGG + Chr1:11407064-11407083 MsG0180000805.01.T01:CDS 60.0%
TTGTCGGATCCTACCTGCCC+CGG + Chr1:11406760-11406779 MsG0180000805.01.T01:CDS 60.0%
! CATGAATTTTGGGCCGGGCG+CGG + Chr1:11406949-11406968 MsG0180000805.01.T01:CDS 60.0%
! TAGAGGTGCGGTGGATCGAC+GGG - Chr1:11403507-11403526 None:intergenic 60.0%
!! GATGGCGGAGGCGATGATCA+AGG - Chr1:11403603-11403622 None:intergenic 60.0%
!! GGTGGAGGGTGTTAGAGGTG+CGG - Chr1:11403519-11403538 None:intergenic 60.0%
!! TGGACCGGAGAAGCACCAAG+CGG + Chr1:11406472-11406491 MsG0180000805.01.T01:CDS 60.0%
!!! CCGGAGTGGCATTTTTGGCC+GGG + Chr1:11407083-11407102 MsG0180000805.01.T01:CDS 60.0%
ACGGGTCCGTGCTGCATACG+AGG + Chr1:11403889-11403908 MsG0180000805.01.T01:CDS 65.0%
AGGCTAGATCCGGGGCAGGT+AGG - Chr1:11406772-11406791 None:intergenic 65.0%
CCGCGTGATCGGATCCGACA+CGG - Chr1:11406505-11406524 None:intergenic 65.0%
CCGTGTCGGATCCGATCACG+CGG + Chr1:11406502-11406521 MsG0180000805.01.T01:CDS 65.0%
CGTATGCAGCACGGACCCGT+GGG - Chr1:11403889-11403908 None:intergenic 65.0%
CGTGATCGGATCCGACACGG+AGG - Chr1:11406502-11406521 None:intergenic 65.0%
GATGAGGCTAGATCCGGGGC+AGG - Chr1:11406776-11406795 None:intergenic 65.0%
GCGGTACACCACCGCGTGAT+CGG - Chr1:11406516-11406535 None:intergenic 65.0%
GGAGGCGATGATCAAGGCGG+CGG - Chr1:11403597-11403616 None:intergenic 65.0%
GGCGGAGGCGATGATCAAGG+CGG - Chr1:11403600-11403619 None:intergenic 65.0%
GTGGTTACCGTCCACCGGAG+TGG + Chr1:11407069-11407088 MsG0180000805.01.T01:CDS 65.0%
TCGTATGCAGCACGGACCCG+TGG - Chr1:11403890-11403909 None:intergenic 65.0%
TGTCGGATCCGATCACGCGG+TGG + Chr1:11406505-11406524 MsG0180000805.01.T01:CDS 65.0%
!! ACCGGAGAAGCACCAAGCGG+TGG + Chr1:11406475-11406494 MsG0180000805.01.T01:CDS 65.0%
!! GCCACCGCTTGGTGCTTCTC+CGG - Chr1:11406479-11406498 None:intergenic 65.0%
!! GGAGGGTGTTAGAGGTGCGG+TGG - Chr1:11403516-11403535 None:intergenic 65.0%
AGGTGCGGTGGATCGACGGG+AGG - Chr1:11403504-11403523 None:intergenic 70.0%
CAAGCGGTGGCCCTCCGTGT+CGG + Chr1:11406488-11406507 MsG0180000805.01.T01:CDS 70.0%
CGATGATCAAGGCGGCGGCG+AGG - Chr1:11403592-11403611 None:intergenic 70.0%
GATCAAGGCGGCGGCGAGGA+TGG - Chr1:11403588-11403607 None:intergenic 70.0%
GATCGACGGGAGGAGCCACC+AGG - Chr1:11403494-11403513 None:intergenic 70.0%
GGGCAGCGGGTCAAATGGCC+TGG + Chr1:11406977-11406996 MsG0180000805.01.T01:CDS 70.0%
TTTGGGCCGGGCGCGGCTAT+CGG + Chr1:11406956-11406975 MsG0180000805.01.T01:CDS 70.0%
! CAGTGCAGCCGAGATGGCGG+AGG - Chr1:11403615-11403634 None:intergenic 70.0%
CGACACGGAGGGCCACCGCT+TGG - Chr1:11406490-11406509 None:intergenic 75.0%
TTGGGCCGGGCGCGGCTATC+GGG + Chr1:11406957-11406976 MsG0180000805.01.T01:CDS 75.0%
! CGCTGCCCGATAGCCGCGCC+CGG - Chr1:11406965-11406984 None:intergenic 80.0%
! CGGGCGCGGCTATCGGGCAG+CGG + Chr1:11406963-11406982 MsG0180000805.01.T01:CDS 80.0%
! GGGCGCGGCTATCGGGCAGC+GGG + Chr1:11406964-11406983 MsG0180000805.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11403113 11407365 11403113 ID=MsG0180000805.01;Name=MsG0180000805.01
Chr1 mRNA 11403113 11407365 11403113 ID=MsG0180000805.01.T01;Parent=MsG0180000805.01;Name=MsG0180000805.01.T01;_AED=0.23;_eAED=0.23;_QI=348|1|1|1|1|1|3|248|610
Chr1 exon 11406420 11407365 11406420 ID=MsG0180000805.01.T01:exon:803;Parent=MsG0180000805.01.T01
Chr1 exon 11405115 11405251 11405115 ID=MsG0180000805.01.T01:exon:802;Parent=MsG0180000805.01.T01
Chr1 exon 11403113 11404458 11403113 ID=MsG0180000805.01.T01:exon:801;Parent=MsG0180000805.01.T01
Chr1 five_prime_UTR 11403113 11403460 11403113 ID=MsG0180000805.01.T01:five_prime_utr;Parent=MsG0180000805.01.T01
Chr1 CDS 11403461 11404458 11403461 ID=MsG0180000805.01.T01:cds;Parent=MsG0180000805.01.T01
Chr1 CDS 11405115 11405251 11405115 ID=MsG0180000805.01.T01:cds;Parent=MsG0180000805.01.T01
Chr1 CDS 11406420 11407117 11406420 ID=MsG0180000805.01.T01:cds;Parent=MsG0180000805.01.T01
Chr1 three_prime_UTR 11407118 11407365 11407118 ID=MsG0180000805.01.T01:three_prime_utr;Parent=MsG0180000805.01.T01
Gene Sequence

>MsG0180000805.01.T01

ATGGACTTTGATAGACTTGGACCGTCTGATCCTGGTGGCTCCTCCCGTCGATCCACCGCACCTCTAACACCCTCCACCACATCAAATTCCTCTCCAAAAAACAACAAGAAGCTCATCATGCTGTCCATCCTCGCCGCCGCCTTGATCATCGCCTCCGCCATCTCGGCTGCACTGATCACCGTTGTCCGGTCTCGTGCTTCATCCAACAATAATTCAAACCTCCTCCATTCCAAACCAACTCAAGCAATCTCCCGAACCTGCAGCAAAACTAGATACCCTTCACTTTGTATCAACTCCCTCCTAGATTTCCCTGGTTCAACATCAGCTTCTGAGCAAGAACTTGTTCATATCTCATTCAATATGACACACCGTCATATAAGCAAAGCACTCTTCGCCTCCTCAGGTCTCTCGTATACAGTCGCGAACCCACGGGTCCGTGCTGCATACGAGGATTGTCTTGAACTAATGGACGAGTCCATGGATGCTATCAGATCATCCATGGACTCCCTCATGACCACGTCCTCAACTTTATCCAATGACGACGGAGAATCAAGACAATTCTCCAATGTCGCTGGATCAACTGAGGACGTGATGACATGGCTCAGTGCCGCACTGACAAACCAAGATACGTGTTTGGAGGGCTTTGAAGACACAAGCGGTACCGTTAAGGATCAGATGGTTGGTAACTTAAAAGATTTGTCGGAACTCGTGAGTAATTCGCTCGCGATATTTTCAGCGAGTGGAGATAATGATTTTACTGGTGTAACGATACAGAACAAGAGAAGATTAATGGGAATGAGCGATATCTCGCGAGAATTTCCTAAGTGGCTTCAGATACGAGATAGGAGATTATTGAGTTTACCGGTATCGGAGATACAAGCTGATATTATCGTTTCAAAGAGTGGTGGTAATGGTACGGTGAAGACAATCACTGAAGCTATTAAGAAAGCACCGGAGCATAGTCATCGTAGATTTATAATTTACGTGAGGGCAGGAAGGTATGAAGAGAATAATTTAAAGGTGGGGAAGAAGAAAACCAATATTATGTTTATAGGAGATGGGAGGGGCAAAACTGTCATCACAGGGAAAAGAAGTGTTGGAGATGGCATGACCACTTTCCACACTGCTTCCTTTGCTGCTAGTGGTCCTGGGTTCATGGCACGTGACATTACATTCGAGAACTACGCTGGACCGGAGAAGCACCAAGCGGTGGCCCTCCGTGTCGGATCCGATCACGCGGTGGTGTACCGCTGCAATATTGTTGGTTATCAAGACGCATGCTATGTACATTCCAACCGTCAATTTTTCCGTGAATGCAACATTTATGGCACGGTGGATTTTATATTTGGAAATGCTGCAGTAGTTTTTCAAAAATGTAACATTTATGCACGTAAACCCATGGCCCAACAAAAGAACACTATTACAGCCCAAAATAGGAAAGACCCGAATCAAAATACGGGTATATCCATTCATGATTGTCGGATCCTACCTGCCCCGGATCTAGCCTCATCAAAGGGCAGCATTGAAACATATTTGGGTCGTCCATGGAAAATGTATTCTAGGACTGTATATATGTTGTCCTATATGGGTGATCATGTGCATCCACACGGATGGTTGGAATGGAATGGTGACTTTGCTTTAAAAACTTTGTATTATGGTGAGTACATGAATTTTGGGCCGGGCGCGGCTATCGGGCAGCGGGTCAAATGGCCTGGATACCGGGTTATTACTTCAACTGTGGAGGCCAATAGATACACCGTGGCTCAATTCATCTCTGGTTCGTCGTGGTTACCGTCCACCGGAGTGGCATTTTTGGCCGGGTTATCCACTTGA
Protein sequence

>MsG0180000805.01.T01

MDFDRLGPSDPGGSSRRSTAPLTPSTTSNSSPKNNKKLIMLSILAAALIIASAISAALITVVRSRASSNNNSNLLHSKPTQAISRTCSKTRYPSLCINSLLDFPGSTSASEQELVHISFNMTHRHISKALFASSGLSYTVANPRVRAAYEDCLELMDESMDAIRSSMDSLMTTSSTLSNDDGESRQFSNVAGSTEDVMTWLSAALTNQDTCLEGFEDTSGTVKDQMVGNLKDLSELVSNSLAIFSASGDNDFTGVTIQNKRRLMGMSDISREFPKWLQIRDRRLLSLPVSEIQADIIVSKSGGNGTVKTITEAIKKAPEHSHRRFIIYVRAGRYEENNLKVGKKKTNIMFIGDGRGKTVITGKRSVGDGMTTFHTASFAASGPGFMARDITFENYAGPEKHQAVALRVGSDHAVVYRCNIVGYQDACYVHSNRQFFRECNIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLASSKGSIETYLGRPWKMYSRTVYMLSYMGDHVHPHGWLEWNGDFALKTLYYGEYMNFGPGAAIGQRVKWPGYRVITSTVEANRYTVAQFISGSSWLPSTGVAFLAGLST*