AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001977.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001977.01.T01 MTR_1g047210 96.583 439 10 2 18 451 24 462 0.0 855
MsG0180001977.01.T01 MTR_4g022430 77.833 406 88 1 25 430 31 434 0.0 645
MsG0180001977.01.T01 MTR_4g134090 34.375 384 228 7 58 427 23 396 7.28e-59 199
MsG0180001977.01.T01 MTR_4g134090 34.375 384 228 7 58 427 30 403 7.38e-59 199
MsG0180001977.01.T01 MTR_5g098310 34.493 345 204 6 73 403 47 383 2.33e-53 184
MsG0180001977.01.T01 MTR_0449s0040 32.476 311 188 6 73 369 47 349 9.80e-39 144
MsG0180001977.01.T01 MTR_4g134090 30.942 223 132 6 73 281 38 252 1.37e-19 89.4
MsG0180001977.01.T01 MTR_0837s0020 33.913 115 76 0 45 159 804 918 8.30e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001977.01.T01 AT2G33150 84.491 432 62 2 25 451 31 462 0.0 739
MsG0180001977.01.T01 AT1G04710 82.324 413 73 0 28 440 30 442 0.0 710
MsG0180001977.01.T01 AT5G48880 74.138 406 99 2 40 439 45 450 0.0 625
MsG0180001977.01.T01 AT5G48880 74.138 406 99 2 40 439 45 450 0.0 625
MsG0180001977.01.T01 AT5G48880 74.138 406 99 2 40 439 45 450 0.0 625
MsG0180001977.01.T01 AT5G48880 74.138 406 99 2 40 439 2 407 0.0 624
MsG0180001977.01.T01 AT5G48230 36.812 345 196 6 73 403 38 374 2.58e-59 199
MsG0180001977.01.T01 AT5G48230 36.812 345 196 6 73 403 43 379 3.97e-59 199
MsG0180001977.01.T01 AT5G47720 34.595 370 216 9 73 427 52 410 1.78e-58 197
MsG0180001977.01.T01 AT5G47720 34.595 370 216 9 73 427 45 403 2.53e-58 197
MsG0180001977.01.T01 AT5G47720 34.595 370 216 9 73 427 45 403 2.53e-58 197
MsG0180001977.01.T01 AT5G47720 34.595 370 216 9 73 427 45 403 3.31e-58 197
MsG0180001977.01.T01 AT5G47720 34.595 370 216 9 73 427 45 403 3.31e-58 197

Find 127 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAAGTTCAGAATGTAAA+AGG 0.199858 1:-30158380 None:intergenic
CCATTGGAAGGAGGCAGTTT+TGG 0.225837 1:-30154964 None:intergenic
TACCCATTCTTGGTGTATTC+AGG 0.235250 1:+30155614 MsG0180001977.01.T01:CDS
ACTTTGTACTTGTTCCTATT+TGG 0.240781 1:+30158087 MsG0180001977.01.T01:three_prime_UTR
AATTTGTGTAATTCAGTAAT+AGG 0.267790 1:-30158458 None:intergenic
CTGATGTAGCTGCTGCTATA+AGG 0.320959 1:+30154625 MsG0180001977.01.T01:CDS
ATTGTTGTCGGTTCTGTATT+GGG 0.330737 1:+30154405 MsG0180001977.01.T01:CDS
GCAAATACCTTGGTGGAAAC+TGG 0.336550 1:-30155218 None:intergenic
GAAAAGGTTGTCCCCTTTGC+GGG 0.341498 1:-30158035 None:intergenic
GCGGCTGCTGCTACTGCTGC+TGG 0.346344 1:+30155173 MsG0180001977.01.T01:CDS
CGTGGCAAGGACTGCCGATA+TGG 0.352522 1:+30157831 MsG0180001977.01.T01:CDS
AATGGCAATTGGGCATCCTT+TGG 0.353600 1:+30157343 MsG0180001977.01.T01:CDS
ATCGATAATAATAACCAAAT+AGG 0.362539 1:-30158101 None:intergenic
TTTGCAGGCTTCAGCATGTT+TGG 0.365592 1:+30153949 MsG0180001977.01.T01:intron
TATCACAGGACAGCTGCATT+TGG 0.372926 1:+30153989 MsG0180001977.01.T01:CDS
AACGGAGGTGCAATGGCAAT+TGG 0.374137 1:+30157332 MsG0180001977.01.T01:CDS
GAAAATGTTGCCAATCGCTT+TGG 0.377320 1:+30154998 MsG0180001977.01.T01:CDS
CAAAAGGGGCTACCCATTCT+TGG 0.386260 1:+30155604 MsG0180001977.01.T01:CDS
TATTGTTGTCGGTTCTGTAT+TGG 0.386914 1:+30154404 MsG0180001977.01.T01:CDS
GTTAACAGACAATGTTCATC+TGG 0.392525 1:+30154588 MsG0180001977.01.T01:CDS
GCAACTGGAATTGCAGCAGC+TGG 0.394353 1:-30157104 None:intergenic
TTTAGGTATTGGTGCCGGTT+TGG 0.402358 1:+30154751 MsG0180001977.01.T01:intron
CTAAATCTAGCGAGCATCCT+TGG 0.404438 1:-30158062 None:intergenic
CCTGCAGCCTTCACAGCAAC+TGG 0.406034 1:-30157119 None:intergenic
GGGCATCCTTTGGGAGCAAC+AGG 0.407923 1:+30157353 MsG0180001977.01.T01:CDS
ATGGCAATTGGGCATCCTTT+GGG 0.407928 1:+30157344 MsG0180001977.01.T01:CDS
GGTAAAATTTATTGTATGAA+AGG 0.415498 1:+30158266 MsG0180001977.01.T01:three_prime_UTR
TTGTGAGCAGGTACTGGAAT+GGG 0.418268 1:+30157962 MsG0180001977.01.T01:intron
AGAAATAAAACCTTCAAAAC+AGG 0.419403 1:-30154249 None:intergenic
GTCACCATTTCCGTTGATGA+TGG 0.423720 1:+30155347 MsG0180001977.01.T01:CDS
AAGAAGTATTGCAATGCAAA+AGG 0.426968 1:+30155588 MsG0180001977.01.T01:CDS
GTCGGTTCTGTATTGGGAGC+TGG 0.433413 1:+30154411 MsG0180001977.01.T01:CDS
CCAATCGCTTTGGAGTTTCA+AGG 0.435048 1:+30155008 MsG0180001977.01.T01:CDS
AATTCCATCATCAACGGAAA+TGG 0.437634 1:-30155351 None:intergenic
ATCACAGGACAGCTGCATTT+GGG 0.439543 1:+30153990 MsG0180001977.01.T01:CDS
CCTTGAAACTCCAAAGCGAT+TGG 0.443317 1:-30155008 None:intergenic
CCAGTTGCTGTGAAGGCTGC+AGG 0.443727 1:+30157119 MsG0180001977.01.T01:CDS
TGGTGTTGATCCTGCCATCA+TGG 0.449169 1:+30157073 MsG0180001977.01.T01:CDS
ACACAGCTTTAAGCTTTCCT+AGG 0.450078 1:-30155397 None:intergenic
TGATGTAGCTGCTGCTATAA+GGG 0.452992 1:+30154626 MsG0180001977.01.T01:CDS
CAAAACTGCCTCCTTCCAAT+GGG 0.459453 1:+30154965 MsG0180001977.01.T01:CDS
AGCTCTGCAATGCCCGCAAA+GGG 0.465075 1:+30158023 MsG0180001977.01.T01:CDS
TTACCAGCAGAGTCTGTGTT+TGG 0.472396 1:+30158245 MsG0180001977.01.T01:three_prime_UTR
ATCCAGAGACTGTGCCGGTT+AGG 0.477289 1:+30154562 MsG0180001977.01.T01:intron
TGCCATTGGATTAGTTGTCA+TGG 0.478121 1:-30154777 None:intergenic
AACTTGAACCCAAGTGAAGT+TGG 0.479113 1:+30154378 MsG0180001977.01.T01:CDS
TGCAATTCCAGTTGCTGTGA+AGG 0.480592 1:+30157112 MsG0180001977.01.T01:CDS
ACAATATCTCCAACTTCACT+TGG 0.482345 1:-30154387 None:intergenic
AGTTGTCATGGATTCCAAAC+CGG 0.484869 1:-30154765 None:intergenic
TCACAAAAGATCAATGTTAA+CGG 0.488907 1:+30157314 MsG0180001977.01.T01:CDS
TGTCTGTTAACTGTCCTAAC+CGG 0.490107 1:-30154576 None:intergenic
GAAGTTGGAGATATTGTTGT+CGG 0.492011 1:+30154393 MsG0180001977.01.T01:CDS
GGAAAAGGTTGTCCCCTTTG+CGG 0.494408 1:-30158036 None:intergenic
AGAAGTATTGCAATGCAAAA+GGG 0.494786 1:+30155589 MsG0180001977.01.T01:CDS
CCAAAACTGCCTCCTTCCAA+TGG 0.495559 1:+30154964 MsG0180001977.01.T01:CDS
ACGGAGGTGCAATGGCAATT+GGG 0.495713 1:+30157333 MsG0180001977.01.T01:CDS
CAGGCTTCAGCATGTTTGGC+GGG 0.496859 1:+30153953 MsG0180001977.01.T01:intron
ACTGATCCATCCCATGCCAT+TGG 0.498873 1:-30154791 None:intergenic
GGGCCAACACCCATGATGGC+AGG 0.504707 1:-30157083 None:intergenic
GTACCTGAATACACCAAGAA+TGG 0.506042 1:-30155617 None:intergenic
TTACCAAACACAGACTCTGC+TGG 0.510058 1:-30158248 None:intergenic
GTAGCTGCTGCTATAAGGGC+TGG 0.512492 1:+30154630 MsG0180001977.01.T01:CDS
GCAGGCTTCAGCATGTTTGG+CGG 0.515109 1:+30153952 MsG0180001977.01.T01:intron
TGATGATCAATCTAAAAGTC+AGG 0.515114 1:+30150197 MsG0180001977.01.T01:CDS
ACATGGATATTACTCCATAT+CGG 0.516143 1:-30157845 None:intergenic
AGGTCAGATAATGATGCGTT+GGG 0.517353 1:-30155377 None:intergenic
GAGCATCCTTGGATAGGAAA+AGG 0.521317 1:-30158051 None:intergenic
TACCTGAATACACCAAGAAT+GGG 0.522492 1:-30155616 None:intergenic
AAAATAACTCAAACTAATGC+AGG 0.523778 1:-30158212 None:intergenic
TGTAGGAGTTTCGTCGCAGT+TGG 0.529855 1:+30157053 MsG0180001977.01.T01:intron
TTCAAGTTCAGAATGTAAAA+GGG 0.532376 1:-30158379 None:intergenic
GATCCTGCCATCATGGGTGT+TGG 0.532689 1:+30157080 MsG0180001977.01.T01:CDS
AATCAAGTCCTAGCTTGTTA+CGG 0.534024 1:-30157292 None:intergenic
AACTTCACTTGGGTTCAAGT+TGG 0.534134 1:-30154376 None:intergenic
AGCTGGGCCAACACCCATGA+TGG 0.538149 1:-30157087 None:intergenic
CAACTGGAATTGCAGCAGCT+GGG 0.538167 1:-30157103 None:intergenic
TGAAATGAAGCGACGTGGCA+AGG 0.538544 1:+30157818 MsG0180001977.01.T01:CDS
AATTTATTGTATGAAAGGAC+AGG 0.539721 1:+30158271 MsG0180001977.01.T01:three_prime_UTR
CAGAGGTAATCCCCATTGGA+AGG 0.540583 1:-30154976 None:intergenic
TAGGTCAGATAATGATGCGT+TGG 0.542770 1:-30155378 None:intergenic
AAAGACGGAACCACCACTGC+TGG 0.543818 1:+30155425 MsG0180001977.01.T01:CDS
GAGCTCTGCAATGCCCGCAA+AGG 0.543894 1:+30158022 MsG0180001977.01.T01:CDS
GGTGTTGATCCTGCCATCAT+GGG 0.545097 1:+30157074 MsG0180001977.01.T01:CDS
GTATATTGCCGTAACAAGCT+AGG 0.554751 1:+30157284 MsG0180001977.01.T01:CDS
TCTAGCGAGCATCCTTGGAT+AGG 0.555818 1:-30158057 None:intergenic
CTCCAGCACCATCACTCACC+TGG 0.557295 1:-30155549 None:intergenic
AAACCTTCAAAACAGGAGCT+AGG 0.557984 1:-30154242 None:intergenic
GTTGATAGGTTGAGTCTCAC+AGG 0.558743 1:+30155147 MsG0180001977.01.T01:intron
CAATGTTAACGGAGGTGCAA+TGG 0.560069 1:+30157325 MsG0180001977.01.T01:CDS
AAAGCTGTGTTTAAGAAAGA+CGG 0.562712 1:+30155410 MsG0180001977.01.T01:CDS
TGATCTTATACCAGCAGTGG+TGG 0.567622 1:-30155435 None:intergenic
AGCCAGGTGAGTGATGGTGC+TGG 0.568071 1:+30155547 MsG0180001977.01.T01:CDS
GACAACTAATCCAATGGCAT+GGG 0.568175 1:+30154781 MsG0180001977.01.T01:CDS
ATTGTGAGCAGGTACTGGAA+TGG 0.569253 1:+30157961 MsG0180001977.01.T01:intron
TGACAACTAATCCAATGGCA+TGG 0.569744 1:+30154780 MsG0180001977.01.T01:CDS
TTATGATCTTATACCAGCAG+TGG 0.573440 1:-30155438 None:intergenic
ATCCATGACAACTAATCCAA+TGG 0.583716 1:+30154775 MsG0180001977.01.T01:CDS
TTACATTCTGAACTTGAACA+TGG 0.584039 1:+30158384 MsG0180001977.01.T01:three_prime_UTR
GAGACAGTGCTGCTTATCAC+AGG 0.584230 1:+30153975 MsG0180001977.01.T01:CDS
TATGTGCTTGCAGTGCATAT+CGG 0.587519 1:+30154163 MsG0180001977.01.T01:intron
TGTGAGCAGGTACTGGAATG+GGG 0.588396 1:+30157963 MsG0180001977.01.T01:intron
AATCTATGTCCCAATGGGTG+TGG 0.588790 1:+30150134 None:intergenic
GAAATTGGCAAATACCTTGG+TGG 0.590278 1:-30155225 None:intergenic
GGAGTAATATCCATGTGCAT+TGG 0.596790 1:+30157852 MsG0180001977.01.T01:CDS
TATATACCTGTTGCTCCCAA+AGG 0.599601 1:-30157359 None:intergenic
GAAGTATTGCAATGCAAAAG+GGG 0.600485 1:+30155590 MsG0180001977.01.T01:CDS
AATTCTAGCCAGGTGAGTGA+TGG 0.600677 1:+30155541 MsG0180001977.01.T01:CDS
CAATATCTCCAACTTCACTT+GGG 0.604564 1:-30154386 None:intergenic
ACTAATCCAATGGCATGGGA+TGG 0.605555 1:+30154785 MsG0180001977.01.T01:CDS
ATAGTGAAAATGTCAATCAC+TGG 0.607016 1:+30158155 MsG0180001977.01.T01:three_prime_UTR
TCCCCATCCAGAGACTGTGC+CGG 0.611728 1:+30154557 MsG0180001977.01.T01:intron
CTTTGCAAAGCTAAACGTGG+TGG 0.621994 1:+30154192 MsG0180001977.01.T01:CDS
AAGAGCTAGTGAATGTCGAA+TGG 0.622234 1:+30154440 MsG0180001977.01.T01:CDS
TTAACAGACAATGTTCATCT+GGG 0.630670 1:+30154589 MsG0180001977.01.T01:CDS
GGGTCGAATTCCATCATCAA+CGG 0.642050 1:-30155357 None:intergenic
GTGAGCAGGTACTGGAATGG+GGG 0.647925 1:+30157964 MsG0180001977.01.T01:intron
AGTGAGTGTACCAATGCACA+TGG 0.653800 1:-30157862 None:intergenic
AGGTAATCCCCATTGGAAGG+AGG 0.656135 1:-30154973 None:intergenic
GCTCTGCAATGCCCGCAAAG+GGG 0.660072 1:+30158024 MsG0180001977.01.T01:CDS
AATCATTCCAGTTTCCACCA+AGG 0.667285 1:+30155211 MsG0180001977.01.T01:CDS
GGTTGAGTCTCACAGGCGAG+CGG 0.670559 1:+30155154 MsG0180001977.01.T01:intron
CAAAAGATCAATGTTAACGG+AGG 0.676322 1:+30157317 MsG0180001977.01.T01:CDS
GAAAGAGCAAGATGAAGCTG+CGG 0.679350 1:+30155030 MsG0180001977.01.T01:CDS
AAAACTGCCTCCTTCCAATG+GGG 0.685024 1:+30154966 MsG0180001977.01.T01:CDS
TTGCATGAAATGAAGCGACG+TGG 0.723164 1:+30157813 MsG0180001977.01.T01:CDS
AACGCATCATTATCTGACCT+AGG 0.725641 1:+30155380 MsG0180001977.01.T01:CDS
GCTCTTTGCAAAGCTAAACG+TGG 0.726080 1:+30154189 MsG0180001977.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAGGTTATAATT+TGG - Chr1:30151304-30151323 None:intergenic 10.0%
!! AAAATGTTGAAATAATTAAA+AGG + Chr1:30150665-30150684 MsG0180001977.01.T01:intron 10.0%
!! AAATAATAACAATTTGTAAT+TGG + Chr1:30151039-30151058 MsG0180001977.01.T01:intron 10.0%
!! AAATAATTAGAAATAATTTG+AGG - Chr1:30155479-30155498 None:intergenic 10.0%
!! AACAATAAAATTAGATAAAA+TGG - Chr1:30151073-30151092 None:intergenic 10.0%
!! ACTAAATTAATTAATTAATC+TGG - Chr1:30154851-30154870 None:intergenic 10.0%
!! ATAAATATATCATTCAATAT+TGG + Chr1:30152136-30152155 MsG0180001977.01.T01:intron 10.0%
!! TAAACAAAAAAAATAGTTAA+AGG - Chr1:30154735-30154754 None:intergenic 10.0%
!! TATTTCCTTAAAAAAAAATA+AGG - Chr1:30151315-30151334 None:intergenic 10.0%
!! TGAATGATATATTTATATTT+AGG - Chr1:30152132-30152151 None:intergenic 10.0%
!! TTAATTACTTACAATATTAT+GGG - Chr1:30150304-30150323 None:intergenic 10.0%
!! TTATTTAATAAGAAATAACT+GGG + Chr1:30152205-30152224 MsG0180001977.01.T01:intron 10.0%
!! TTTATTTAATAAGAAATAAC+TGG + Chr1:30152204-30152223 MsG0180001977.01.T01:intron 10.0%
!!! AAGTACAAATAATAATTTTT+TGG - Chr1:30150526-30150545 None:intergenic 10.0%
!!! ATTTTATCTAATTTTATTGT+TGG + Chr1:30151072-30151091 MsG0180001977.01.T01:intron 10.0%
!!! TATAACCTTATTTTTTTTTA+AGG + Chr1:30151307-30151326 MsG0180001977.01.T01:intron 10.0%
!!! TGAATTTAATTATTTTTGAA+AGG + Chr1:30152871-30152890 MsG0180001977.01.T01:intron 10.0%
!!! TTAATTTAGTTTTTTACTTT+TGG + Chr1:30154861-30154880 MsG0180001977.01.T01:intron 10.0%
!!! TTTAACTATTTTTTTTGTTT+AGG + Chr1:30154734-30154753 MsG0180001977.01.T01:intron 10.0%
!!! TTTTTTCTAAAAAGTAATTA+TGG + Chr1:30151219-30151238 MsG0180001977.01.T01:intron 10.0%
!! AAATGTATTATAAAATTGTG+TGG + Chr1:30156057-30156076 MsG0180001977.01.T01:intron 15.0%
!! AATAAACAATGTTAACTATA+TGG - Chr1:30157937-30157956 None:intergenic 15.0%
!! ATCAGTTTATAAATATTGTT+AGG - Chr1:30155670-30155689 None:intergenic 15.0%
!! GAATATAGTTTAATATTCAT+TGG + Chr1:30153726-30153745 MsG0180001977.01.T01:intron 15.0%
!! GATCAGAAAAAAAAAATAAT+GGG - Chr1:30152519-30152538 None:intergenic 15.0%
!! GTATTGAGAATTATTTAAAA+AGG + Chr1:30156178-30156197 MsG0180001977.01.T01:intron 15.0%
!! GTTAATTACTTACAATATTA+TGG - Chr1:30150305-30150324 None:intergenic 15.0%
!! TATTGCTTAATAATCAATTA+AGG - Chr1:30153809-30153828 None:intergenic 15.0%
!! TCAGTTTATAAATATTGTTA+GGG - Chr1:30155669-30155688 None:intergenic 15.0%
!! TGATCAGAAAAAAAAAATAA+TGG - Chr1:30152520-30152539 None:intergenic 15.0%
!! TTAATTAATTAATCTGGTAA+AGG - Chr1:30154845-30154864 None:intergenic 15.0%
!!! AATATTGAATGATTTTTTGA+AGG - Chr1:30152164-30152183 None:intergenic 15.0%
!!! ACACAATTTTATAATACATT+TGG - Chr1:30156058-30156077 None:intergenic 15.0%
!!! ATATTGAATGATTTTTTGAA+GGG - Chr1:30152163-30152182 None:intergenic 15.0%
!!! ATTTTATAATACATTTGGAT+TGG - Chr1:30156053-30156072 None:intergenic 15.0%
!!! TATTTTTGTTTTTTGTTAAG+AGG - Chr1:30152940-30152959 None:intergenic 15.0%
!!! TATTTTTTTTGTTTAGGTAT+TGG + Chr1:30154740-30154759 MsG0180001977.01.T01:intron 15.0%
!!! TTAATTATTTTTGAAAGGAT+TGG + Chr1:30152876-30152895 MsG0180001977.01.T01:intron 15.0%
!!! TTCTATAAAAGTATATGAAT+TGG + Chr1:30153694-30153713 MsG0180001977.01.T01:intron 15.0%
!!! TTTAATATGAAATGTTTTTC+TGG + Chr1:30158333-30158352 MsG0180001977.01.T01:three_prime_UTR 15.0%
!!! TTTATAAACTGATTTCAAAT+TGG + Chr1:30155677-30155696 MsG0180001977.01.T01:intron 15.0%
!!! TTTTATAATACATTTGGATT+GGG - Chr1:30156052-30156071 None:intergenic 15.0%
!! AAAAAATTCAAGAATCTTCA+AGG + Chr1:30151648-30151667 MsG0180001977.01.T01:intron 20.0%
!! AAAACATTCTTATTCACATT+TGG + Chr1:30152846-30152865 MsG0180001977.01.T01:intron 20.0%
!! AAACATTCTTATTCACATTT+GGG + Chr1:30152847-30152866 MsG0180001977.01.T01:intron 20.0%
!! AATTAAAACTAAATCCACTT+AGG - Chr1:30152416-30152435 None:intergenic 20.0%
!! AATTGAGATTATCGAAAAAA+AGG - Chr1:30152062-30152081 None:intergenic 20.0%
!! ACATATATGAATTGAAATTG+AGG + Chr1:30153576-30153595 MsG0180001977.01.T01:intron 20.0%
!! ATAAAACAGACGTTTATAAT+GGG - Chr1:30152039-30152058 None:intergenic 20.0%
!! ATCGATAATAATAACCAAAT+AGG - Chr1:30158104-30158123 None:intergenic 20.0%
!! GAAAAATACATGAATATATC+AGG - Chr1:30157624-30157643 None:intergenic 20.0%
!! GATATATTTATATTTAGGCA+AGG - Chr1:30152127-30152146 None:intergenic 20.0%
!! GGTAAAATTTATTGTATGAA+AGG + Chr1:30158266-30158285 MsG0180001977.01.T01:three_prime_UTR 20.0%
!! TATTGATGTTTATATTCATG+TGG + Chr1:30153410-30153429 MsG0180001977.01.T01:intron 20.0%
!! TGAAATAATGACATTTACTT+AGG - Chr1:30152484-30152503 None:intergenic 20.0%
!! TTCTCAATAGAATTAATCAA+AGG - Chr1:30150587-30150606 None:intergenic 20.0%
!! TTTATGGAAGAAAAAAACTT+TGG - Chr1:30156678-30156697 None:intergenic 20.0%
!!! ACAAAAAAAAACTCTTTTTG+TGG - Chr1:30152659-30152678 None:intergenic 20.0%
!!! ACAAAAAGAGTTTTTTTTTG+TGG + Chr1:30152658-30152677 MsG0180001977.01.T01:intron 20.0%
!!! ATTACAGTTTAAGATTTGTT+AGG + Chr1:30151499-30151518 MsG0180001977.01.T01:intron 20.0%
!!! CAAAAAAAAACTCTTTTTGT+GGG - Chr1:30152658-30152677 None:intergenic 20.0%
!!! CAAGATGAATTTGTTTAATT+TGG - Chr1:30150764-30150783 None:intergenic 20.0%
!!! GTTTGTTTGATAATTGATAT+AGG + Chr1:30154078-30154097 MsG0180001977.01.T01:intron 20.0%
!!! GTTTTGTTTTTTTATGGAAA+TGG - Chr1:30151121-30151140 None:intergenic 20.0%
!!! TAACTTTTTTTTATCGGAAA+TGG - Chr1:30151001-30151020 None:intergenic 20.0%
!!! TAAGGAAATAACCTTATTTT+TGG + Chr1:30151325-30151344 MsG0180001977.01.T01:intron 20.0%
!!! TACTTTTTGGTTGTTATAAA+TGG + Chr1:30156409-30156428 MsG0180001977.01.T01:intron 20.0%
!!! TAGATGAATTTTTAGTTGTT+TGG + Chr1:30156272-30156291 MsG0180001977.01.T01:intron 20.0%
!!! TATCTAATTTTATTGTTGGA+CGG + Chr1:30151076-30151095 MsG0180001977.01.T01:intron 20.0%
!!! TGATCTTTTTGAAATAAATG+AGG + Chr1:30157160-30157179 MsG0180001977.01.T01:CDS 20.0%
!!! TGTTCTCAAAATCAATTTTA+TGG - Chr1:30156694-30156713 None:intergenic 20.0%
!!! TGTTGGTTTGATAAAAATAA+AGG + Chr1:30153550-30153569 MsG0180001977.01.T01:intron 20.0%
!!! TTAATTTTAACTATCACATG+TGG + Chr1:30151751-30151770 MsG0180001977.01.T01:intron 20.0%
!!! TTATCCTTATCTTTTTGAAT+TGG + Chr1:30153612-30153631 MsG0180001977.01.T01:intron 20.0%
!!! TTATTTTATTTTTGGGATGT+AGG + Chr1:30157768-30157787 MsG0180001977.01.T01:intron 20.0%
!!! TTTGCTGTTTTGTTTTTTTA+TGG - Chr1:30151127-30151146 None:intergenic 20.0%
! AAAATAACTCAAACTAATGC+AGG - Chr1:30158215-30158234 None:intergenic 25.0%
! AAAATATCTTCTAACACAGT+AGG + Chr1:30151989-30152008 MsG0180001977.01.T01:intron 25.0%
! AAACACACATAAAATCCAAA+AGG - Chr1:30153320-30153339 None:intergenic 25.0%
! AAACCTAAAAACTAAGAACA+AGG - Chr1:30150229-30150248 None:intergenic 25.0%
! AAATGGAGAGAAAAGAAAAT+AGG - Chr1:30156901-30156920 None:intergenic 25.0%
! AACACACATAAAATCCAAAA+GGG - Chr1:30153319-30153338 None:intergenic 25.0%
! AATAGTAGAAGCCAAAAATA+AGG - Chr1:30151339-30151358 None:intergenic 25.0%
! AATTCAATATACCCTTATAG+TGG - Chr1:30155250-30155269 None:intergenic 25.0%
! AATTTATTGTATGAAAGGAC+AGG + Chr1:30158271-30158290 MsG0180001977.01.T01:three_prime_UTR 25.0%
! ACTTACAATATTATGGGTTT+GGG - Chr1:30150298-30150317 None:intergenic 25.0%
! AGAAATAAAACCTTCAAAAC+AGG - Chr1:30154252-30154271 None:intergenic 25.0%
! AGAGAAGTAAGAAACAAAAT+CGG - Chr1:30155965-30155984 None:intergenic 25.0%
! ATATCATTATGTTAAAGAGC+AGG - Chr1:30155742-30155761 None:intergenic 25.0%
! CACAGTATGTTCTATAAATA+AGG + Chr1:30155700-30155719 MsG0180001977.01.T01:intron 25.0%
! CAGATATAGGAAAGTTAATT+TGG - Chr1:30155887-30155906 None:intergenic 25.0%
! GAAAAAAGGAACATAAGATA+AGG - Chr1:30157200-30157219 None:intergenic 25.0%
! GATAAAACAGACGTTTATAA+TGG - Chr1:30152040-30152059 None:intergenic 25.0%
! GATGTTTGAAGAATTAGAAA+AGG - Chr1:30150812-30150831 None:intergenic 25.0%
! GGTAGGATAGATAATATAAT+GGG + Chr1:30156293-30156312 MsG0180001977.01.T01:intron 25.0%
! GTAGGATAGATAATATAATG+GGG + Chr1:30156294-30156313 MsG0180001977.01.T01:intron 25.0%
! GTATGTTCTATAAATAAGGA+AGG + Chr1:30155704-30155723 MsG0180001977.01.T01:intron 25.0%
! TAAACAAATGGTGAGAAAAA+AGG - Chr1:30157214-30157233 None:intergenic 25.0%
! TAAGTAAAGTGATCAGAAAT+AGG - Chr1:30151547-30151566 None:intergenic 25.0%
! TAATTGATATAGGAGATTTG+TGG + Chr1:30154088-30154107 MsG0180001977.01.T01:intron 25.0%
! TACTTACAATATTATGGGTT+TGG - Chr1:30150299-30150318 None:intergenic 25.0%
! TATCACATTAACACTTTGTT+TGG - Chr1:30156497-30156516 None:intergenic 25.0%
! TATCATTATGTTAAAGAGCA+GGG - Chr1:30155741-30155760 None:intergenic 25.0%
! TCACAAAAGATCAATGTTAA+CGG + Chr1:30157314-30157333 MsG0180001977.01.T01:CDS 25.0%
! TCAGATTCATCATTATTACA+TGG - Chr1:30150935-30150954 None:intergenic 25.0%
! TGAATATATGCAAATCATTG+AGG - Chr1:30157245-30157264 None:intergenic 25.0%
! TGGTAACTTTCAAAACAAAA+AGG - Chr1:30157475-30157494 None:intergenic 25.0%
! TGGTAGGATAGATAATATAA+TGG + Chr1:30156292-30156311 MsG0180001977.01.T01:intron 25.0%
! TGTATAGATTCAACATAAGA+AGG - Chr1:30155913-30155932 None:intergenic 25.0%
! TTAATGATGATTGGAAAACT+TGG - Chr1:30150871-30150890 None:intergenic 25.0%
! TTATCAGCAAGATTTAGTTA+TGG - Chr1:30155123-30155142 None:intergenic 25.0%
! TTCTTAAAATAATACCTCGA+GGG + Chr1:30154885-30154904 MsG0180001977.01.T01:intron 25.0%
! TTGAATACTTAAACTGTGTT+TGG + Chr1:30156217-30156236 MsG0180001977.01.T01:intron 25.0%
! TTTCTTAAAATAATACCTCG+AGG + Chr1:30154884-30154903 MsG0180001977.01.T01:intron 25.0%
!! AAATTGATGTGTTTTGCTTT+TGG - Chr1:30151733-30151752 None:intergenic 25.0%
!! ATACTTTTATGTTAAAAGCG+TGG + Chr1:30151175-30151194 MsG0180001977.01.T01:intron 25.0%
!! CATGAAATGTGTGATAATTT+TGG + Chr1:30155782-30155801 MsG0180001977.01.T01:intron 25.0%
!! GAAGTACATATTCATGTTTT+TGG - Chr1:30155863-30155882 None:intergenic 25.0%
!! GACTTATATTTGTATTTTGC+AGG + Chr1:30153934-30153953 MsG0180001977.01.T01:intron 25.0%
!! GGATTTTATGATATTGGTAA+AGG + Chr1:30154651-30154670 MsG0180001977.01.T01:intron 25.0%
!! GGTGAATTTTACATATTGTT+TGG - Chr1:30156880-30156899 None:intergenic 25.0%
!! TAAAAGCGTGGAAAAAAATT+TGG + Chr1:30151187-30151206 MsG0180001977.01.T01:intron 25.0%
!! TATAACAACCAAAAAGTATG+TGG - Chr1:30156407-30156426 None:intergenic 25.0%
!! TCAATGATTTGCATATATTC+AGG + Chr1:30157244-30157263 MsG0180001977.01.T01:intron 25.0%
!! TCATTGGAATATGAATTTTC+AGG + Chr1:30153742-30153761 MsG0180001977.01.T01:intron 25.0%
!! TGATTTGATATCTGTGTTTT+AGG + Chr1:30155517-30155536 MsG0180001977.01.T01:intron 25.0%
!! TTACATATTGTTTGGAACTT+TGG - Chr1:30156872-30156891 None:intergenic 25.0%
!! TTATTTGTTGGTTGTAATGT+AGG + Chr1:30157036-30157055 MsG0180001977.01.T01:intron 25.0%
!! TTCAAGTTCAGAATGTAAAA+GGG - Chr1:30158382-30158401 None:intergenic 25.0%
!! TTTGAGAAACTTTTCTTTTG+AGG + Chr1:30151951-30151970 MsG0180001977.01.T01:intron 25.0%
!! TTTTGTTAAGAGGACAAAAT+AGG - Chr1:30152930-30152949 None:intergenic 25.0%
!!! AAAAGAGTTTTTTTTTGTGG+TGG + Chr1:30152661-30152680 MsG0180001977.01.T01:intron 25.0%
!!! AATTTGTTTTTCCACGATTT+GGG + Chr1:30151618-30151637 MsG0180001977.01.T01:intron 25.0%
!!! ATTTGTTTAATTTGGTGTCA+AGG - Chr1:30150756-30150775 None:intergenic 25.0%
!!! CAACGAGATGATTTTTAAAA+TGG - Chr1:30156975-30156994 None:intergenic 25.0%
!!! CTCGTTTAAAGTTTTTTAAC+TGG + Chr1:30152775-30152794 MsG0180001977.01.T01:intron 25.0%
!!! GCTTTGAAATAAACTTGTTA+TGG + Chr1:30153909-30153928 MsG0180001977.01.T01:intron 25.0%
!!! TAATTTGTTTTTCCACGATT+TGG + Chr1:30151617-30151636 MsG0180001977.01.T01:intron 25.0%
!!! TATCAGGTTATTTTAGCTAT+AGG - Chr1:30157608-30157627 None:intergenic 25.0%
!!! TATTTGATTTGATGGAAATG+TGG - Chr1:30156791-30156810 None:intergenic 25.0%
!!! TGAATTTTTAGTTGTTTGGT+AGG + Chr1:30156276-30156295 MsG0180001977.01.T01:intron 25.0%
!!! TGTGTTTTTGTTATCTTGAT+TGG + Chr1:30153333-30153352 MsG0180001977.01.T01:intron 25.0%
!!! TTGAAATAAACTTGTTATGG+TGG + Chr1:30153912-30153931 MsG0180001977.01.T01:intron 25.0%
!!! TTTGTTTAATTTGGTGTCAA+GGG - Chr1:30150755-30150774 None:intergenic 25.0%
!!! TTTTTGGTTGTTATAAATGG+TGG + Chr1:30156412-30156431 MsG0180001977.01.T01:intron 25.0%
!!! TTTTTTTATGGAAATGGAGT+TGG - Chr1:30151115-30151134 None:intergenic 25.0%
AAAACTAAATCCACTTAGGT+TGG - Chr1:30152412-30152431 None:intergenic 30.0%
AAAATATGGTACGTGTTGAA+TGG + Chr1:30152234-30152253 MsG0180001977.01.T01:intron 30.0%
AAACAATCAGAGCATAAAGT+AGG - Chr1:30151786-30151805 None:intergenic 30.0%
AAAGCTGTGTTTAAGAAAGA+CGG + Chr1:30155410-30155429 MsG0180001977.01.T01:CDS 30.0%
AAATAATATCATCCACCACT+CGG + Chr1:30151675-30151694 MsG0180001977.01.T01:intron 30.0%
AAATATGGTACGTGTTGAAT+GGG + Chr1:30152235-30152254 MsG0180001977.01.T01:intron 30.0%
AACAAGAATTGTTTGAATGC+AGG - Chr1:30156942-30156961 None:intergenic 30.0%
AACGTGAACTAAAGTAGTAA+AGG - Chr1:30154286-30154305 None:intergenic 30.0%
AACTTTACTTTCTTTGAGCA+AGG - Chr1:30151875-30151894 None:intergenic 30.0%
AAGAATTAGAAAAGGCTTTC+GGG - Chr1:30150804-30150823 None:intergenic 30.0%
AATAAGAAATAACTGGGAGA+AGG + Chr1:30152211-30152230 MsG0180001977.01.T01:intron 30.0%
AATCTGGTAAAGGAGAAAAA+CGG - Chr1:30154835-30154854 None:intergenic 30.0%
ACAAATTATCTAGACATACC+AGG - Chr1:30154486-30154505 None:intergenic 30.0%
ACAAGAATTGTTTGAATGCA+GGG - Chr1:30156941-30156960 None:intergenic 30.0%
ACACAAGATTGATAAATAGC+TGG - Chr1:30151408-30151427 None:intergenic 30.0%
ACATGGATATTACTCCATAT+CGG - Chr1:30157848-30157867 None:intergenic 30.0%
ACTTTGTACTTGTTCCTATT+TGG + Chr1:30158087-30158106 MsG0180001977.01.T01:three_prime_UTR 30.0%
AGACATCTCTAAATACAAAC+GGG + Chr1:30151582-30151601 MsG0180001977.01.T01:intron 30.0%
AGCTATTTATCAATCTTGTG+TGG + Chr1:30151407-30151426 MsG0180001977.01.T01:intron 30.0%
AGTAATGGTAGGAAACAAAA+TGG - Chr1:30156918-30156937 None:intergenic 30.0%
ATAGTGAAAATGTCAATCAC+TGG + Chr1:30158155-30158174 MsG0180001977.01.T01:three_prime_UTR 30.0%
ATCTGACGAACATTATTTGT+TGG + Chr1:30157024-30157043 MsG0180001977.01.T01:intron 30.0%
ATTTAGGCAAGGAGATAATA+TGG - Chr1:30152116-30152135 None:intergenic 30.0%
ATTTGCCAATTTCCACTATA+AGG + Chr1:30155235-30155254 MsG0180001977.01.T01:intron 30.0%
CAATAATCTATTAAGCACAC+AGG + Chr1:30152599-30152618 MsG0180001977.01.T01:intron 30.0%
CACAGCTAAACAAGATAAAA+TGG - Chr1:30156608-30156627 None:intergenic 30.0%
CATAAGAAGGAAACAGATAT+AGG - Chr1:30155900-30155919 None:intergenic 30.0%
CCAATCATCATTAAAAGTAG+AGG + Chr1:30150877-30150896 MsG0180001977.01.T01:intron 30.0%
GAAAAACGGAAAATTACTCT+AGG - Chr1:30154821-30154840 None:intergenic 30.0%
GAAGAATTAGAAAAGGCTTT+CGG - Chr1:30150805-30150824 None:intergenic 30.0%
GAGACATCTCTAAATACAAA+CGG + Chr1:30151581-30151600 MsG0180001977.01.T01:intron 30.0%
GAGGTTAGTACATAAACAAA+TGG - Chr1:30157226-30157245 None:intergenic 30.0%
GCTATTTATCAATCTTGTGT+GGG + Chr1:30151408-30151427 MsG0180001977.01.T01:intron 30.0%
GTATAATTGACTGTTGTTGT+TGG + Chr1:30152306-30152325 MsG0180001977.01.T01:intron 30.0%
GTTTATTGTAAATTGTGAGC+AGG + Chr1:30157950-30157969 MsG0180001977.01.T01:intron 30.0%
TACAACATATTGCAGAAAAC+AGG - Chr1:30156090-30156109 None:intergenic 30.0%
TAGAAGCTCATGTTTATTCT+TGG + Chr1:30153498-30153517 MsG0180001977.01.T01:intron 30.0%
TATTCATGTGGATTCTATTG+TGG + Chr1:30153422-30153441 MsG0180001977.01.T01:intron 30.0%
TATTGTACTTTCTCTTGCTT+TGG + Chr1:30155837-30155856 MsG0180001977.01.T01:intron 30.0%
TCAAATCACGTTCATGTAAA+TGG - Chr1:30154328-30154347 None:intergenic 30.0%
TCATTGGATGAAAAAGAAGA+AGG - Chr1:30153192-30153211 None:intergenic 30.0%
TCCATCAAATCAAATAAGCA+AGG + Chr1:30156795-30156814 MsG0180001977.01.T01:intron 30.0%
TGATGATCAATCTAAAAGTC+AGG + Chr1:30150197-30150216 MsG0180001977.01.T01:CDS 30.0%
TGTATTCTTACATGTGATTG+TGG - Chr1:30151827-30151846 None:intergenic 30.0%
TTAACAGACAATGTTCATCT+GGG + Chr1:30154589-30154608 MsG0180001977.01.T01:CDS 30.0%
TTACATTCTGAACTTGAACA+TGG + Chr1:30158384-30158403 MsG0180001977.01.T01:three_prime_UTR 30.0%
TTATAGAACCAACACAAATC+AGG - Chr1:30153682-30153701 None:intergenic 30.0%
TTATCAAATCCTGTGAGAAA+GGG - Chr1:30156117-30156136 None:intergenic 30.0%
TTTGCCAATTTCCACTATAA+GGG + Chr1:30155236-30155255 MsG0180001977.01.T01:intron 30.0%
TTTGTTTGGTATACTGGAAA+AGG - Chr1:30156483-30156502 None:intergenic 30.0%
! AAAATTATGGGGCAATCTTT+TGG + Chr1:30151703-30151722 MsG0180001977.01.T01:intron 30.0%
! AAAGACAACTTGCTCAAAAT+AGG + Chr1:30151375-30151394 MsG0180001977.01.T01:intron 30.0%
! AAGACAACTTGCTCAAAATA+GGG + Chr1:30151376-30151395 MsG0180001977.01.T01:intron 30.0%
! AATAAAACTTTTCTCCCTGA+TGG - Chr1:30156356-30156375 None:intergenic 30.0%
! GTGATTAGAAACTCTTTTTG+TGG - Chr1:30152756-30152775 None:intergenic 30.0%
! GTTCAAGTTCAGAATGTAAA+AGG - Chr1:30158383-30158402 None:intergenic 30.0%
! TAACACTTTGTTTGGTATAC+TGG - Chr1:30156489-30156508 None:intergenic 30.0%
! TATACCCTTATAGTGGAAAT+TGG - Chr1:30155243-30155262 None:intergenic 30.0%
! TGTGTTAGAAGATATTTTCC+TGG - Chr1:30151987-30152006 None:intergenic 30.0%
! TTTCTGTTCCACATACTTTT+TGG + Chr1:30156396-30156415 MsG0180001977.01.T01:intron 30.0%
!! AAATACAAGTTGTTGACTTG+TGG - Chr1:30157385-30157404 None:intergenic 30.0%
!! AAGAAGTATTGCAATGCAAA+AGG + Chr1:30155588-30155607 MsG0180001977.01.T01:CDS 30.0%
!! AGAAGTATTGCAATGCAAAA+GGG + Chr1:30155589-30155608 MsG0180001977.01.T01:CDS 30.0%
!! ATCAGGGAGAAAAGTTTTAT+TGG + Chr1:30156355-30156374 MsG0180001977.01.T01:intron 30.0%
!! CCTCTACTTTTAATGATGAT+TGG - Chr1:30150880-30150899 None:intergenic 30.0%
!! GAATATGAATTTTCAGGAGA+GGG + Chr1:30153748-30153767 MsG0180001977.01.T01:intron 30.0%
!! GATCCTTGTTCTTAGTTTTT+AGG + Chr1:30150223-30150242 MsG0180001977.01.T01:intron 30.0%
!! GATTTTGTTTCTTACTTCTC+TGG + Chr1:30155964-30155983 MsG0180001977.01.T01:intron 30.0%
!! GTTTTGATCTTGAATCTGTT+TGG + Chr1:30153380-30153399 MsG0180001977.01.T01:intron 30.0%
!! TCCTTGCTTATTTGATTTGA+TGG - Chr1:30156799-30156818 None:intergenic 30.0%
!! TTTTGAGGAAAAAAAAAGCC+AGG + Chr1:30151966-30151985 MsG0180001977.01.T01:intron 30.0%
!!! ATCTTGATTGGTTTTTAGCT+TGG + Chr1:30153345-30153364 MsG0180001977.01.T01:intron 30.0%
!!! ATTTTAACTATCACATGTGG+TGG + Chr1:30151754-30151773 MsG0180001977.01.T01:intron 30.0%
!!! TGAATGGGGACATTTTTTTA+AGG + Chr1:30152250-30152269 MsG0180001977.01.T01:intron 30.0%
AAACAAAATCGGTACTTAGC+TGG - Chr1:30155954-30155973 None:intergenic 35.0%
AACAAAACTGTAATGTGCCT+TGG + Chr1:30157645-30157664 MsG0180001977.01.T01:intron 35.0%
AAGTATGTGGAACAGAAAAG+TGG - Chr1:30156394-30156413 None:intergenic 35.0%
AATATGGTACGTGTTGAATG+GGG + Chr1:30152236-30152255 MsG0180001977.01.T01:intron 35.0%
AATATGGTATGGGTCAAAGT+TGG - Chr1:30152100-30152119 None:intergenic 35.0%
AATTCCATCATCAACGGAAA+TGG - Chr1:30155354-30155373 None:intergenic 35.0%
ACAATATCTCCAACTTCACT+TGG - Chr1:30154390-30154409 None:intergenic 35.0%
ACAATTTATTGTTTCGCCCA+GGG + Chr1:30150690-30150709 MsG0180001977.01.T01:intron 35.0%
ACCACAATCAATACAATGCA+AGG - Chr1:30156140-30156159 None:intergenic 35.0%
ACTCGGTTGACAAAATTATG+GGG + Chr1:30151692-30151711 MsG0180001977.01.T01:intron 35.0%
AGATGTGGAAGATGAATCAT+TGG - Chr1:30153208-30153227 None:intergenic 35.0%
AGGAAATTATGTGTAGCAGA+AGG - Chr1:30153789-30153808 None:intergenic 35.0%
AGTATGTGGAACAGAAAAGT+GGG - Chr1:30156393-30156412 None:intergenic 35.0%
ATATTATGGGTTTGGGAAAG+TGG - Chr1:30150291-30150310 None:intergenic 35.0%
ATCCATGACAACTAATCCAA+TGG + Chr1:30154775-30154794 MsG0180001977.01.T01:CDS 35.0%
ATTAGAGATCAACTTCCAAG+GGG - Chr1:30150958-30150977 None:intergenic 35.0%
ATTTCTTACTTTGTCGTGAC+AGG + Chr1:30154922-30154941 MsG0180001977.01.T01:intron 35.0%
CAAAAGATCAATGTTAACGG+AGG + Chr1:30157317-30157336 MsG0180001977.01.T01:CDS 35.0%
CAAATCAAATAAGCAAGGAG+AGG + Chr1:30156800-30156819 MsG0180001977.01.T01:intron 35.0%
CAATATATCGTCTCGATCAT+TGG + Chr1:30153472-30153491 MsG0180001977.01.T01:intron 35.0%
CAATATCTCCAACTTCACTT+GGG - Chr1:30154389-30154408 None:intergenic 35.0%
CACTCGGTTGACAAAATTAT+GGG + Chr1:30151691-30151710 MsG0180001977.01.T01:intron 35.0%
CATCTCGTTGCAAAATTGTA+TGG + Chr1:30156985-30157004 MsG0180001977.01.T01:intron 35.0%
CATTAGAGATCAACTTCCAA+GGG - Chr1:30150959-30150978 None:intergenic 35.0%
GAAACAAACATTGAGAGATG+TGG - Chr1:30153223-30153242 None:intergenic 35.0%
GAACTAGCGTAACAAATAAC+TGG + Chr1:30157719-30157738 MsG0180001977.01.T01:intron 35.0%
GAAGTTGGAGATATTGTTGT+CGG + Chr1:30154393-30154412 MsG0180001977.01.T01:CDS 35.0%
GACATCTCTAAATACAAACG+GGG + Chr1:30151583-30151602 MsG0180001977.01.T01:intron 35.0%
GACCATGTGTAAAATATGCA+AGG - Chr1:30152705-30152724 None:intergenic 35.0%
GATGAGTAAAAGTGAAAGAG+TGG - Chr1:30156720-30156739 None:intergenic 35.0%
GCAAGGAGATAATATGGTAT+GGG - Chr1:30152110-30152129 None:intergenic 35.0%
GGAAATTATGTGTAGCAGAA+GGG - Chr1:30153788-30153807 None:intergenic 35.0%
GGGACCAATTCAAAAAGATA+AGG - Chr1:30153619-30153638 None:intergenic 35.0%
GTGTAAAATATGCAAGGTCT+GGG - Chr1:30152699-30152718 None:intergenic 35.0%
GTTAACAGACAATGTTCATC+TGG + Chr1:30154588-30154607 MsG0180001977.01.T01:CDS 35.0%
GTTATCAAATCCTGTGAGAA+AGG - Chr1:30156118-30156137 None:intergenic 35.0%
TAACTGGGAGAAGGAAAATA+TGG + Chr1:30152220-30152239 MsG0180001977.01.T01:intron 35.0%
TACCTGAATACACCAAGAAT+GGG - Chr1:30155619-30155638 None:intergenic 35.0%
TAGATTGTTGACCCAAAAAC+TGG + Chr1:30155311-30155330 MsG0180001977.01.T01:intron 35.0%
TATCAAATCCTGTGAGAAAG+GGG - Chr1:30156116-30156135 None:intergenic 35.0%
TGGGAAAGTGGAAAAGATAA+AGG - Chr1:30150279-30150298 None:intergenic 35.0%
TGTGTAAAATATGCAAGGTC+TGG - Chr1:30152700-30152719 None:intergenic 35.0%
TTAGCTGTGAAGAGGAAAAA+AGG + Chr1:30156619-30156638 MsG0180001977.01.T01:intron 35.0%
TTAGGCAGAAACTGAAAGAA+TGG - Chr1:30152466-30152485 None:intergenic 35.0%
TTATGATCTTATACCAGCAG+TGG - Chr1:30155441-30155460 None:intergenic 35.0%
TTGGACAAGTATCAAATCAG+TGG + Chr1:30155801-30155820 MsG0180001977.01.T01:intron 35.0%
! AATATAATGGGGCTACTGAA+TGG + Chr1:30156305-30156324 MsG0180001977.01.T01:intron 35.0%
! AATCATGACCTGATTTGTGT+TGG + Chr1:30153671-30153690 MsG0180001977.01.T01:intron 35.0%
! ACAGACGTTTATAATGGGAA+TGG - Chr1:30152034-30152053 None:intergenic 35.0%
! ACTCATCACACTTGTCTTTT+AGG + Chr1:30156567-30156586 MsG0180001977.01.T01:intron 35.0%
! AGACAACTTGCTCAAAATAG+GGG + Chr1:30151377-30151396 MsG0180001977.01.T01:intron 35.0%
! AGGGCTGGATTTTATGATAT+TGG + Chr1:30154645-30154664 MsG0180001977.01.T01:CDS 35.0%
! ATTCATAGCTCTATGTACCA+AGG - Chr1:30157665-30157684 None:intergenic 35.0%
! CAGACGTTTATAATGGGAAT+GGG - Chr1:30152033-30152052 None:intergenic 35.0%
! CGTGATTTGAGTTTCATTGT+AGG + Chr1:30154338-30154357 MsG0180001977.01.T01:intron 35.0%
! CTTGTATGCTAACTCTAAAG+TGG - Chr1:30150843-30150862 None:intergenic 35.0%
! GAATTTTCCTTTCACGTGTT+AGG + Chr1:30155265-30155284 MsG0180001977.01.T01:intron 35.0%
! GACCTTGCATATTTTACACA+TGG + Chr1:30152700-30152719 MsG0180001977.01.T01:intron 35.0%
! TAAGCTTAACTCAGTTGGTA+AGG - Chr1:30152727-30152746 None:intergenic 35.0%
! TATCTTGTTTAGCTGTGAAG+AGG + Chr1:30156611-30156630 MsG0180001977.01.T01:intron 35.0%
! TGCTCTGATTGTTTTCTTTC+TGG + Chr1:30151792-30151811 MsG0180001977.01.T01:intron 35.0%
! TGTGGAAAGGAAGTATATGA+AGG - Chr1:30156460-30156479 None:intergenic 35.0%
! TGTTTGGAACTTTGGACTTT+AGG - Chr1:30156864-30156883 None:intergenic 35.0%
! TTCGATTTTCACTCTCAACA+TGG + Chr1:30153122-30153141 MsG0180001977.01.T01:intron 35.0%
! TTGAGCAAGTTGTCTTTTGT+TGG - Chr1:30151372-30151391 None:intergenic 35.0%
!! AATCAAGTCCTAGCTTGTTA+CGG - Chr1:30157295-30157314 None:intergenic 35.0%
!! ACATGTCTTGTTGTTGTTGT+TGG + Chr1:30152282-30152301 MsG0180001977.01.T01:intron 35.0%
!! ACCTTGCATTGTATTGATTG+TGG + Chr1:30156136-30156155 MsG0180001977.01.T01:intron 35.0%
!! AGATTTGTTAGGCTTTGTCA+TGG + Chr1:30151510-30151529 MsG0180001977.01.T01:intron 35.0%
!! AGTGGTATTGGTTTGAAATC+TGG - Chr1:30152386-30152405 None:intergenic 35.0%
!! ATTGTTGTCGGTTCTGTATT+GGG + Chr1:30154405-30154424 MsG0180001977.01.T01:CDS 35.0%
!! CACACTTGTCTTTTAGGAAA+TGG + Chr1:30156573-30156592 MsG0180001977.01.T01:intron 35.0%
!! GAAGTATTGCAATGCAAAAG+GGG + Chr1:30155590-30155609 MsG0180001977.01.T01:CDS 35.0%
!! GGAATATGAATTTTCAGGAG+AGG + Chr1:30153747-30153766 MsG0180001977.01.T01:intron 35.0%
!! GTGATATTTGATGACCCTTT+TGG + Chr1:30153302-30153321 MsG0180001977.01.T01:intron 35.0%
!! GTGGTATTGGTTTGAAATCT+GGG - Chr1:30152385-30152404 None:intergenic 35.0%
!! TAACTCTAAAGTGGTTGTAG+AGG - Chr1:30150834-30150853 None:intergenic 35.0%
!! TATTGTTGTCGGTTCTGTAT+TGG + Chr1:30154404-30154423 MsG0180001977.01.T01:CDS 35.0%
!! TGTTTTAGGTAATTCTAGCC+AGG + Chr1:30155531-30155550 MsG0180001977.01.T01:intron 35.0%
!! TTAGGTTGGATTAGTGGTAT+TGG - Chr1:30152398-30152417 None:intergenic 35.0%
!! TTCCTGTTTTTCATCCATCA+GGG + Chr1:30156339-30156358 MsG0180001977.01.T01:intron 35.0%
!! TTGCATTGTATTGATTGTGG+TGG + Chr1:30156139-30156158 MsG0180001977.01.T01:intron 35.0%
!! TTGCTGTTTCACGAAGTAAT+CGG - Chr1:30153018-30153037 None:intergenic 35.0%
!!! AGGGAGAAAAGTTTTATTGG+TGG + Chr1:30156358-30156377 MsG0180001977.01.T01:intron 35.0%
!!! TCCATCAATGTCGTTTTTGT+CGG - Chr1:30150346-30150365 None:intergenic 35.0%
!!! TTTTGTTTAGGTATTGGTGC+CGG + Chr1:30154746-30154765 MsG0180001977.01.T01:intron 35.0%
AAACCTTCAAAACAGGAGCT+AGG - Chr1:30154245-30154264 None:intergenic 40.0%
AACGCATCATTATCTGACCT+AGG + Chr1:30155380-30155399 MsG0180001977.01.T01:CDS 40.0%
AACTTCACTTGGGTTCAAGT+TGG - Chr1:30154379-30154398 None:intergenic 40.0%
AACTTGAACCCAAGTGAAGT+TGG + Chr1:30154378-30154397 MsG0180001977.01.T01:CDS 40.0%
AAGAGCTAGTGAATGTCGAA+TGG + Chr1:30154440-30154459 MsG0180001977.01.T01:CDS 40.0%
AATCATTCCAGTTTCCACCA+AGG + Chr1:30155211-30155230 MsG0180001977.01.T01:CDS 40.0%
ACTGCACTTCAGAATGAACA+AGG + Chr1:30150403-30150422 MsG0180001977.01.T01:intron 40.0%
AGGTCAGATAATGATGCGTT+GGG - Chr1:30155380-30155399 None:intergenic 40.0%
AGTTGTCATGGATTCCAAAC+CGG - Chr1:30154768-30154787 None:intergenic 40.0%
ATCAGAACCTAACACGTGAA+AGG - Chr1:30155275-30155294 None:intergenic 40.0%
CACAATTTATTGTTTCGCCC+AGG + Chr1:30150689-30150708 MsG0180001977.01.T01:intron 40.0%
CCACTCGGTTGACAAAATTA+TGG + Chr1:30151690-30151709 MsG0180001977.01.T01:intron 40.0%
CCCCTAAAAATATGTTGCCT+GGG - Chr1:30150503-30150522 None:intergenic 40.0%
CTATAAATAAGGAAGGCCAG+TGG + Chr1:30155711-30155730 MsG0180001977.01.T01:intron 40.0%
CTGAATCTGATCGATGATTC+TGG + Chr1:30154510-30154529 MsG0180001977.01.T01:intron 40.0%
GAAAATGTTGCCAATCGCTT+TGG + Chr1:30154998-30155017 MsG0180001977.01.T01:CDS 40.0%
GAAATTGGCAAATACCTTGG+TGG - Chr1:30155228-30155247 None:intergenic 40.0%
GAAGAGGAAAAAAGGTGGAA+GGG + Chr1:30156627-30156646 MsG0180001977.01.T01:intron 40.0%
GAATGAGATGGTGACTTGAT+TGG + Chr1:30153527-30153546 MsG0180001977.01.T01:intron 40.0%
GACAACTAATCCAATGGCAT+GGG + Chr1:30154781-30154800 MsG0180001977.01.T01:CDS 40.0%
GATCTATCTCGCAAACACAT+TGG - Chr1:30157495-30157514 None:intergenic 40.0%
GCATTAGAGATCAACTTCCA+AGG - Chr1:30150960-30150979 None:intergenic 40.0%
GGAAAGAAAATAGAGCCAGA+GGG - Chr1:30156840-30156859 None:intergenic 40.0%
GGAGTAATATCCATGTGCAT+TGG + Chr1:30157852-30157871 MsG0180001977.01.T01:CDS 40.0%
GGCAAGGAGATAATATGGTA+TGG - Chr1:30152111-30152130 None:intergenic 40.0%
GGTGTATTCAGGTACTTCAT+TGG + Chr1:30155625-30155644 MsG0180001977.01.T01:intron 40.0%
GTACCTGAATACACCAAGAA+TGG - Chr1:30155620-30155639 None:intergenic 40.0%
GTATATTGCCGTAACAAGCT+AGG + Chr1:30157284-30157303 MsG0180001977.01.T01:CDS 40.0%
GTGGAAATTGGCAAATACCT+TGG - Chr1:30155231-30155250 None:intergenic 40.0%
TAATGATGAATCTGACCCCT+TGG + Chr1:30150940-30150959 MsG0180001977.01.T01:intron 40.0%
TACCACTAATCCAACCTAAG+TGG + Chr1:30152399-30152418 MsG0180001977.01.T01:intron 40.0%
TAGGTCAGATAATGATGCGT+TGG - Chr1:30155381-30155400 None:intergenic 40.0%
TATATACCTGTTGCTCCCAA+AGG - Chr1:30157362-30157381 None:intergenic 40.0%
TATGTGCTTGCAGTGCATAT+CGG + Chr1:30154163-30154182 MsG0180001977.01.T01:intron 40.0%
TCGAACCTGAGATCTAAAGA+AGG + Chr1:30152351-30152370 MsG0180001977.01.T01:intron 40.0%
TCTTGGTCTGATGAATGAGA+TGG + Chr1:30153515-30153534 MsG0180001977.01.T01:intron 40.0%
TGAAGAGGAAAAAAGGTGGA+AGG + Chr1:30156626-30156645 MsG0180001977.01.T01:intron 40.0%
TGACAACTAATCCAATGGCA+TGG + Chr1:30154780-30154799 MsG0180001977.01.T01:CDS 40.0%
TGACGCAAGTATTCATCTTC+AGG + Chr1:30155994-30156013 MsG0180001977.01.T01:intron 40.0%
TGATGTAGCTGCTGCTATAA+GGG + Chr1:30154626-30154645 MsG0180001977.01.T01:CDS 40.0%
TGGAAAGAAAATAGAGCCAG+AGG - Chr1:30156841-30156860 None:intergenic 40.0%
TGTAAATTGTGAGCAGGTAC+TGG + Chr1:30157956-30157975 MsG0180001977.01.T01:intron 40.0%
TGTCTGTTAACTGTCCTAAC+CGG - Chr1:30154579-30154598 None:intergenic 40.0%
TGTTTGAATGCAGGGAGTAA+TGG - Chr1:30156933-30156952 None:intergenic 40.0%
TTGGAACTTTGGACTTTAGG+TGG - Chr1:30156861-30156880 None:intergenic 40.0%
TTGGTATACTGGAAAAGGTG+TGG - Chr1:30156478-30156497 None:intergenic 40.0%
! ACATTGATGGACCATTAAGC+CGG + Chr1:30150355-30150374 MsG0180001977.01.T01:intron 40.0%
! AGCCCAGGCAACATATTTTT+AGG + Chr1:30150498-30150517 MsG0180001977.01.T01:intron 40.0%
! ATACTGGAAAAGGTGTGGAA+AGG - Chr1:30156473-30156492 None:intergenic 40.0%
! ATCTTTTTGAATTGGTCCCG+AGG + Chr1:30153620-30153639 MsG0180001977.01.T01:intron 40.0%
! ATTTCTCCTCGCCAGTTTTT+GGG - Chr1:30155325-30155344 None:intergenic 40.0%
! CCAGGGTACCAAAATACTTA+GGG + Chr1:30150707-30150726 MsG0180001977.01.T01:intron 40.0%
! CCATAATTTTGTCAACCGAG+TGG - Chr1:30151693-30151712 None:intergenic 40.0%
! CGTTTATAATGGGAATGGGA+AGG - Chr1:30152029-30152048 None:intergenic 40.0%
! CTGATGGATGAAAAACAGGA+AGG - Chr1:30156340-30156359 None:intergenic 40.0%
! GAGATGATTTTACTTCCCTC+TGG + Chr1:30156822-30156841 MsG0180001977.01.T01:intron 40.0%
! TAATTTTGTCAACCGAGTGG+TGG - Chr1:30151690-30151709 None:intergenic 40.0%
! TACCCATTCTTGGTGTATTC+AGG + Chr1:30155614-30155633 MsG0180001977.01.T01:CDS 40.0%
! TCTGATCGATGATTCTGGTT+AGG + Chr1:30154515-30154534 MsG0180001977.01.T01:intron 40.0%
! TTTTCAGAGGTAATCCCCAT+TGG - Chr1:30154983-30155002 None:intergenic 40.0%
! TTTTCTTTCCACCCAAATCG+TGG - Chr1:30151632-30151651 None:intergenic 40.0%
!! ACACAGCTTTAAGCTTTCCT+AGG - Chr1:30155400-30155419 None:intergenic 40.0%
!! ATCCACTTAGGTTGGATTAG+TGG - Chr1:30152404-30152423 None:intergenic 40.0%
!! ATTCTGAAGTGCAGTTAGAG+TGG - Chr1:30150398-30150417 None:intergenic 40.0%
!! CTTCCTGTTTTTCATCCATC+AGG + Chr1:30156338-30156357 MsG0180001977.01.T01:intron 40.0%
!! GCCCAGGCAACATATTTTTA+GGG + Chr1:30150499-30150518 MsG0180001977.01.T01:intron 40.0%
!! GTTTAATTTGGTGTCAAGGG+TGG - Chr1:30150752-30150771 None:intergenic 40.0%
!! TATCCTAGCTCCTGTTTTGA+AGG + Chr1:30154239-30154258 MsG0180001977.01.T01:CDS 40.0%
!! TGCCATTGGATTAGTTGTCA+TGG - Chr1:30154780-30154799 None:intergenic 40.0%
!! TTGTTTTTCCACGATTTGGG+TGG + Chr1:30151621-30151640 MsG0180001977.01.T01:intron 40.0%
!!! AGTTTTTTTTTGTGGTGGCC+GGG + Chr1:30152666-30152685 MsG0180001977.01.T01:intron 40.0%
!!! CCATCAATGTCGTTTTTGTC+GGG - Chr1:30150345-30150364 None:intergenic 40.0%
!!! CCCAGGCAACATATTTTTAG+GGG + Chr1:30150500-30150519 MsG0180001977.01.T01:intron 40.0%
!!! CCTAAGTATTTTGGTACCCT+GGG - Chr1:30150709-30150728 None:intergenic 40.0%
!!! GAGTTTTTTTTTGTGGTGGC+CGG + Chr1:30152665-30152684 MsG0180001977.01.T01:intron 40.0%
!!! GCATTTTATGCTGGTTTTCC+TGG + Chr1:30154465-30154484 MsG0180001977.01.T01:CDS 40.0%
AAAACTGCCTCCTTCCAATG+GGG + Chr1:30154966-30154985 MsG0180001977.01.T01:CDS 45.0%
AAAGGTGGAAGGGAAACAGT+TGG + Chr1:30156637-30156656 MsG0180001977.01.T01:intron 45.0%
AAATGGAGTTGGCCCTCAAT+TGG - Chr1:30151104-30151123 None:intergenic 45.0%
AAGGTGGAAGGGAAACAGTT+GGG + Chr1:30156638-30156657 MsG0180001977.01.T01:intron 45.0%
AATAATACCTCGAGGGCTAC+AGG + Chr1:30154892-30154911 MsG0180001977.01.T01:intron 45.0%
AATGGAGTTGGCCCTCAATT+GGG - Chr1:30151103-30151122 None:intergenic 45.0%
AATGGCAATTGGGCATCCTT+TGG + Chr1:30157343-30157362 MsG0180001977.01.T01:CDS 45.0%
AATTCTAGCCAGGTGAGTGA+TGG + Chr1:30155541-30155560 MsG0180001977.01.T01:CDS 45.0%
ACTAATCCAATGGCATGGGA+TGG + Chr1:30154785-30154804 MsG0180001977.01.T01:CDS 45.0%
AGCAATGATGCTGTAGCTCA+TGG - Chr1:30157415-30157434 None:intergenic 45.0%
AGTGAGTGTACCAATGCACA+TGG - Chr1:30157865-30157884 None:intergenic 45.0%
ATCACAGGACAGCTGCATTT+GGG + Chr1:30153990-30154009 MsG0180001977.01.T01:CDS 45.0%
ATGGCAATTGGGCATCCTTT+GGG + Chr1:30157344-30157363 MsG0180001977.01.T01:CDS 45.0%
CAAAACTGCCTCCTTCCAAT+GGG + Chr1:30154965-30154984 MsG0180001977.01.T01:CDS 45.0%
CAACAGACACATGACACTGA+AGG + Chr1:30157524-30157543 MsG0180001977.01.T01:intron 45.0%
CATGACACTGAAGGTCATGT+TGG + Chr1:30157533-30157552 MsG0180001977.01.T01:intron 45.0%
CCAACTGAGTTAAGCTTACG+AGG + Chr1:30152729-30152748 MsG0180001977.01.T01:intron 45.0%
CCCGACAAAAACGACATTGA+TGG + Chr1:30150342-30150361 MsG0180001977.01.T01:intron 45.0%
CCTCGTAAGCTTAACTCAGT+TGG - Chr1:30152732-30152751 None:intergenic 45.0%
CCTTGAAACTCCAAAGCGAT+TGG - Chr1:30155011-30155030 None:intergenic 45.0%
CTAAATCTAGCGAGCATCCT+TGG - Chr1:30158065-30158084 None:intergenic 45.0%
CTGATGTAGCTGCTGCTATA+AGG + Chr1:30154625-30154644 MsG0180001977.01.T01:CDS 45.0%
CTTTGCAAAGCTAAACGTGG+TGG + Chr1:30154192-30154211 MsG0180001977.01.T01:CDS 45.0%
GAAAGAGCAAGATGAAGCTG+CGG + Chr1:30155030-30155049 MsG0180001977.01.T01:CDS 45.0%
GAAGTGCAGTTAGAGTGGAT+GGG - Chr1:30150393-30150412 None:intergenic 45.0%
GAGCATCCTTGGATAGGAAA+AGG - Chr1:30158054-30158073 None:intergenic 45.0%
GATGGTGACTTGATTGGTGT+TGG + Chr1:30153533-30153552 MsG0180001977.01.T01:intron 45.0%
GCAAATACCTTGGTGGAAAC+TGG - Chr1:30155221-30155240 None:intergenic 45.0%
GCCCCTAAAAATATGTTGCC+TGG - Chr1:30150504-30150523 None:intergenic 45.0%
GCTCTTTGCAAAGCTAAACG+TGG + Chr1:30154189-30154208 MsG0180001977.01.T01:CDS 45.0%
GCTGTGAAGAGGAAAAAAGG+TGG + Chr1:30156622-30156641 MsG0180001977.01.T01:intron 45.0%
GGGTCGAATTCCATCATCAA+CGG - Chr1:30155360-30155379 None:intergenic 45.0%
GGTACCAAAATACTTAGGGC+CGG + Chr1:30150711-30150730 MsG0180001977.01.T01:intron 45.0%
GTATGGTAGTTTAGAGGACG+TGG + Chr1:30151434-30151453 MsG0180001977.01.T01:intron 45.0%
GTGCTCCTTCTTTAGATCTC+AGG - Chr1:30152359-30152378 None:intergenic 45.0%
TATCACAGGACAGCTGCATT+TGG + Chr1:30153989-30154008 MsG0180001977.01.T01:CDS 45.0%
TGAAGTGCAGTTAGAGTGGA+TGG - Chr1:30150394-30150413 None:intergenic 45.0%
TGAATGCAGGGAGTAATGGT+AGG - Chr1:30156929-30156948 None:intergenic 45.0%
TGATCTTATACCAGCAGTGG+TGG - Chr1:30155438-30155457 None:intergenic 45.0%
TGCAATTCCAGTTGCTGTGA+AGG + Chr1:30157112-30157131 MsG0180001977.01.T01:CDS 45.0%
TGTCCAGACTCACCTTCAAA+CGG + Chr1:30157556-30157575 MsG0180001977.01.T01:intron 45.0%
TTACCAAACACAGACTCTGC+TGG - Chr1:30158251-30158270 None:intergenic 45.0%
TTACCAGCAGAGTCTGTGTT+TGG + Chr1:30158245-30158264 MsG0180001977.01.T01:three_prime_UTR 45.0%
TTGCATGAAATGAAGCGACG+TGG + Chr1:30157813-30157832 MsG0180001977.01.T01:CDS 45.0%
TTGTAGTACCCCTTTCTCAC+AGG + Chr1:30156105-30156124 MsG0180001977.01.T01:intron 45.0%
TTTGCAGGCTTCAGCATGTT+TGG + Chr1:30153949-30153968 MsG0180001977.01.T01:intron 45.0%
! CAATCTTGTGTGGGAGTGTA+TGG + Chr1:30151417-30151436 MsG0180001977.01.T01:intron 45.0%
! CAATGTTAACGGAGGTGCAA+TGG + Chr1:30157325-30157344 MsG0180001977.01.T01:CDS 45.0%
! CATTGGAAGGAGGCAGTTTT+GGG - Chr1:30154966-30154985 None:intergenic 45.0%
! CCCAGGGTACCAAAATACTT+AGG + Chr1:30150706-30150725 MsG0180001977.01.T01:intron 45.0%
! CGAATGGCTGCATTTTATGC+TGG + Chr1:30154456-30154475 MsG0180001977.01.T01:CDS 45.0%
! CTCCCTGATGGATGAAAAAC+AGG - Chr1:30156344-30156363 None:intergenic 45.0%
! GATTTCTCCTCGCCAGTTTT+TGG - Chr1:30155326-30155345 None:intergenic 45.0%
! GCGATTGGCAACATTTTCAG+AGG - Chr1:30154996-30155015 None:intergenic 45.0%
! GGACAACCTTTTCCTATCCA+AGG + Chr1:30158045-30158064 MsG0180001977.01.T01:CDS 45.0%
! GGGAGTGTATGGTAGTTTAG+AGG + Chr1:30151428-30151447 MsG0180001977.01.T01:intron 45.0%
! GTCACCATTTCCGTTGATGA+TGG + Chr1:30155347-30155366 MsG0180001977.01.T01:CDS 45.0%
! GTTGATAGGTTGAGTCTCAC+AGG + Chr1:30155147-30155166 MsG0180001977.01.T01:intron 45.0%
! TCACCTTCAAACGGAAGTGT+TGG + Chr1:30157565-30157584 MsG0180001977.01.T01:intron 45.0%
!! AATTTGGTGTCAAGGGTGGA+AGG - Chr1:30150748-30150767 None:intergenic 45.0%
!! ATGAGAGTTTGCCGGCTTAA+TGG - Chr1:30150369-30150388 None:intergenic 45.0%
!! ATTGTGAGCAGGTACTGGAA+TGG + Chr1:30157961-30157980 MsG0180001977.01.T01:intron 45.0%
!! CCAATCGCTTTGGAGTTTCA+AGG + Chr1:30155008-30155027 MsG0180001977.01.T01:CDS 45.0%
!! TTGTGAGCAGGTACTGGAAT+GGG + Chr1:30157962-30157981 MsG0180001977.01.T01:intron 45.0%
!! TTTAGGTATTGGTGCCGGTT+TGG + Chr1:30154751-30154770 MsG0180001977.01.T01:intron 45.0%
!!! CCCTAAGTATTTTGGTACCC+TGG - Chr1:30150710-30150729 None:intergenic 45.0%
!!! ATTTCAATTTATTTTATTTT+TGG + Chr1:30157760-30157779 MsG0180001977.01.T01:intron 5.0%
!!! TAATTTTAACTTTTTTTTAT+CGG - Chr1:30151007-30151026 None:intergenic 5.0%
!!! TTTAATTTTTTATTTTGTTT+TGG - Chr1:30152988-30153007 None:intergenic 5.0%
!!! TTTCAATTTATTTTATTTTT+GGG + Chr1:30157761-30157780 MsG0180001977.01.T01:intron 5.0%
ACTGATCCATCCCATGCCAT+TGG - Chr1:30154794-30154813 None:intergenic 50.0%
AGAAGCTCGTGATTCTCCTC+GGG - Chr1:30153639-30153658 None:intergenic 50.0%
AGGGAAACAGTTGGGATGTG+TGG + Chr1:30156646-30156665 MsG0180001977.01.T01:intron 50.0%
AGGTAATCCCCATTGGAAGG+AGG - Chr1:30154976-30154995 None:intergenic 50.0%
ATCACGAGCTTCTGCTTTCG+AGG + Chr1:30153646-30153665 MsG0180001977.01.T01:intron 50.0%
CAAAAGGGGCTACCCATTCT+TGG + Chr1:30155604-30155623 MsG0180001977.01.T01:CDS 50.0%
CAACTGGAATTGCAGCAGCT+GGG - Chr1:30157106-30157125 None:intergenic 50.0%
CAAGGTCTGGGTTCAAATCC+CGG - Chr1:30152687-30152706 None:intergenic 50.0%
CAGAAGCTCGTGATTCTCCT+CGG - Chr1:30153640-30153659 None:intergenic 50.0%
CAGAGGTAATCCCCATTGGA+AGG - Chr1:30154979-30154998 None:intergenic 50.0%
CCAAAACTGCCTCCTTCCAA+TGG + Chr1:30154964-30154983 MsG0180001977.01.T01:CDS 50.0%
CTGTGTGTGCATACGTGTAC+TGG + Chr1:30157893-30157912 MsG0180001977.01.T01:intron 50.0%
CTTCCGTTTGAAGGTGAGTC+TGG - Chr1:30157562-30157581 None:intergenic 50.0%
GAAAAGGTTGTCCCCTTTGC+GGG - Chr1:30158038-30158057 None:intergenic 50.0%
GCACCAACACTTCCGTTTGA+AGG - Chr1:30157571-30157590 None:intergenic 50.0%
GGAAAAGGTTGTCCCCTTTG+CGG - Chr1:30158039-30158058 None:intergenic 50.0%
GGATGGGAATGAGAGTTTGC+CGG - Chr1:30150377-30150396 None:intergenic 50.0%
TAAAGAGCAGGGCAATCCAC+TGG - Chr1:30155730-30155749 None:intergenic 50.0%
TCTAGCGAGCATCCTTGGAT+AGG - Chr1:30158060-30158079 None:intergenic 50.0%
TGAAATGAAGCGACGTGGCA+AGG + Chr1:30157818-30157837 MsG0180001977.01.T01:CDS 50.0%
TGTAGGAGTTTCGTCGCAGT+TGG + Chr1:30157053-30157072 MsG0180001977.01.T01:intron 50.0%
TGTTGACCCAAAAACTGGCG+AGG + Chr1:30155316-30155335 MsG0180001977.01.T01:CDS 50.0%
TGTTGGACGGACCCAATTGA+GGG + Chr1:30151089-30151108 MsG0180001977.01.T01:intron 50.0%
TTGTTGGACGGACCCAATTG+AGG + Chr1:30151088-30151107 MsG0180001977.01.T01:intron 50.0%
! AACGGAGGTGCAATGGCAAT+TGG + Chr1:30157332-30157351 MsG0180001977.01.T01:CDS 50.0%
! ACGGAGGTGCAATGGCAATT+GGG + Chr1:30157333-30157352 MsG0180001977.01.T01:CDS 50.0%
! CATACGTGTACTGGTGTGTG+TGG + Chr1:30157902-30157921 MsG0180001977.01.T01:intron 50.0%
! CCATTGGAAGGAGGCAGTTT+TGG - Chr1:30154967-30154986 None:intergenic 50.0%
!! GAGACAGTGCTGCTTATCAC+AGG + Chr1:30153975-30153994 MsG0180001977.01.T01:CDS 50.0%
!! GGTGTTGATCCTGCCATCAT+GGG + Chr1:30157074-30157093 MsG0180001977.01.T01:CDS 50.0%
!! TGGTGTTGATCCTGCCATCA+TGG + Chr1:30157073-30157092 MsG0180001977.01.T01:CDS 50.0%
!! TGTGAGCAGGTACTGGAATG+GGG + Chr1:30157963-30157982 MsG0180001977.01.T01:intron 50.0%
!!! GCAGCTGCTGTTTTTGAGAG+AGG + Chr1:30157986-30158005 MsG0180001977.01.T01:CDS 50.0%
AAAGACGGAACCACCACTGC+TGG + Chr1:30155425-30155444 MsG0180001977.01.T01:CDS 55.0%
AACCGGCACAGTCTCTGGAT+GGG - Chr1:30154562-30154581 None:intergenic 55.0%
AAGGGTGGAAGGAAGGGACA+GGG - Chr1:30150737-30150756 None:intergenic 55.0%
AGCTCTGCAATGCCCGCAAA+GGG + Chr1:30158023-30158042 MsG0180001977.01.T01:CDS 55.0%
CAGGCTTCAGCATGTTTGGC+GGG + Chr1:30153953-30153972 MsG0180001977.01.T01:intron 55.0%
GATCCTGCCATCATGGGTGT+TGG + Chr1:30157080-30157099 MsG0180001977.01.T01:CDS 55.0%
GCAACTGGAATTGCAGCAGC+TGG - Chr1:30157107-30157126 None:intergenic 55.0%
GCAGGCTTCAGCATGTTTGG+CGG + Chr1:30153952-30153971 MsG0180001977.01.T01:intron 55.0%
GGTGTCAAGGGTGGAAGGAA+GGG - Chr1:30150743-30150762 None:intergenic 55.0%
GTAGCTGCTGCTATAAGGGC+TGG + Chr1:30154630-30154649 MsG0180001977.01.T01:CDS 55.0%
TAACCGGCACAGTCTCTGGA+TGG - Chr1:30154563-30154582 None:intergenic 55.0%
! AGGGCCGGCCCTAAGTATTT+TGG - Chr1:30150718-30150737 None:intergenic 55.0%
! GTCGGTTCTGTATTGGGAGC+TGG + Chr1:30154411-30154430 MsG0180001977.01.T01:CDS 55.0%
! TGGTGTCAAGGGTGGAAGGA+AGG - Chr1:30150744-30150763 None:intergenic 55.0%
!! ATCCAGAGACTGTGCCGGTT+AGG + Chr1:30154562-30154581 MsG0180001977.01.T01:intron 55.0%
!! GTGAGCAGGTACTGGAATGG+GGG + Chr1:30157964-30157983 MsG0180001977.01.T01:intron 55.0%
ACCGGCACAGTCTCTGGATG+GGG - Chr1:30154561-30154580 None:intergenic 60.0%
AGCTGGGCCAACACCCATGA+TGG - Chr1:30157090-30157109 None:intergenic 60.0%
ATCACGACCTGTAGCCCTCG+AGG - Chr1:30154902-30154921 None:intergenic 60.0%
CAAGGGTGGAAGGAAGGGAC+AGG - Chr1:30150738-30150757 None:intergenic 60.0%
CCAGTTGCTGTGAAGGCTGC+AGG + Chr1:30157119-30157138 MsG0180001977.01.T01:CDS 60.0%
CCCTGGAAGGGGAGGAAAAC+CGG - Chr1:30150448-30150467 None:intergenic 60.0%
CCTGCAGCCTTCACAGCAAC+TGG - Chr1:30157122-30157141 None:intergenic 60.0%
CGTGGCAAGGACTGCCGATA+TGG + Chr1:30157831-30157850 MsG0180001977.01.T01:CDS 60.0%
CTCCAGCACCATCACTCACC+TGG - Chr1:30155552-30155571 None:intergenic 60.0%
GAGCTCTGCAATGCCCGCAA+AGG + Chr1:30158022-30158041 MsG0180001977.01.T01:CDS 60.0%
GCTCTGCAATGCCCGCAAAG+GGG + Chr1:30158024-30158043 MsG0180001977.01.T01:CDS 60.0%
GGTTGAGTCTCACAGGCGAG+CGG + Chr1:30155154-30155173 MsG0180001977.01.T01:intron 60.0%
GTCCTAACCGGCACAGTCTC+TGG - Chr1:30154567-30154586 None:intergenic 60.0%
TCCCCATCCAGAGACTGTGC+CGG + Chr1:30154557-30154576 MsG0180001977.01.T01:intron 60.0%
TGGAAGGGGAGGAAAACCGG+AGG - Chr1:30150445-30150464 None:intergenic 60.0%
TTACCACCACCACCTGCCTC+CGG + Chr1:30150426-30150445 MsG0180001977.01.T01:intron 60.0%
! AGCCAGGTGAGTGATGGTGC+TGG + Chr1:30155547-30155566 MsG0180001977.01.T01:CDS 60.0%
! CCGGTTTTCCTCCCCTTCCA+GGG + Chr1:30150445-30150464 MsG0180001977.01.T01:intron 60.0%
! CGGTTTTCCTCCCCTTCCAG+GGG + Chr1:30150446-30150465 MsG0180001977.01.T01:intron 60.0%
! GGGCATCCTTTGGGAGCAAC+AGG + Chr1:30157353-30157372 MsG0180001977.01.T01:CDS 60.0%
! TCCGGTTTTCCTCCCCTTCC+AGG + Chr1:30150444-30150463 MsG0180001977.01.T01:intron 60.0%
! TTTTCCTCCCCTTCCAGGGG+TGG + Chr1:30150449-30150468 MsG0180001977.01.T01:intron 60.0%
AGGGGAGGAAAACCGGAGGC+AGG - Chr1:30150441-30150460 None:intergenic 65.0%
GGAAAACCGGAGGCAGGTGG+TGG - Chr1:30150435-30150454 None:intergenic 65.0%
GGAGGAAAACCGGAGGCAGG+TGG - Chr1:30150438-30150457 None:intergenic 65.0%
GGGCCAACACCCATGATGGC+AGG - Chr1:30157086-30157105 None:intergenic 65.0%
GTGGAAGGAAGGGACAGGGC+CGG - Chr1:30150733-30150752 None:intergenic 65.0%
! AAACCGGAGGCAGGTGGTGG+TGG - Chr1:30150432-30150451 None:intergenic 65.0%
CCTCAGGGCCACCCCTGGAA+GGG - Chr1:30150460-30150479 None:intergenic 70.0%
CCTTCCAGGGGTGGCCCTGA+GGG + Chr1:30150458-30150477 MsG0180001977.01.T01:intron 70.0%
CTCAGGGCCACCCCTGGAAG+GGG - Chr1:30150459-30150478 None:intergenic 70.0%
GCCCCTCAAGCCCACCCTCA+GGG - Chr1:30150475-30150494 None:intergenic 70.0%
GCGGCTGCTGCTACTGCTGC+TGG + Chr1:30155173-30155192 MsG0180001977.01.T01:CDS 70.0%
! CTGAGGGTGGGCTTGAGGGG+CGG + Chr1:30150474-30150493 MsG0180001977.01.T01:intron 70.0%
! GCCCTGAGGGTGGGCTTGAG+GGG + Chr1:30150471-30150490 MsG0180001977.01.T01:intron 70.0%
! GGCCCTGAGGGTGGGCTTGA+GGG + Chr1:30150470-30150489 MsG0180001977.01.T01:intron 70.0%
! TGGCCCTGAGGGTGGGCTTG+AGG + Chr1:30150469-30150488 MsG0180001977.01.T01:intron 70.0%
AGGGCCACCCCTGGAAGGGG+AGG - Chr1:30150456-30150475 None:intergenic 75.0%
CCAGGGGTGGCCCTGAGGGT+GGG + Chr1:30150462-30150481 MsG0180001977.01.T01:intron 75.0%
CCCTCAGGGCCACCCCTGGA+AGG - Chr1:30150461-30150480 None:intergenic 75.0%
CCCTTCCAGGGGTGGCCCTG+AGG + Chr1:30150457-30150476 MsG0180001977.01.T01:intron 75.0%
CGCCCCTCAAGCCCACCCTC+AGG - Chr1:30150476-30150495 None:intergenic 75.0%
TCCAGGGGTGGCCCTGAGGG+TGG + Chr1:30150461-30150480 MsG0180001977.01.T01:intron 75.0%
! CCCACCCTCAGGGCCACCCC+TGG - Chr1:30150465-30150484 None:intergenic 80.0%
! GGCTTGAGGGGCGGCAGCCC+AGG + Chr1:30150483-30150502 MsG0180001977.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 30150147 30158471 30150147 ID=MsG0180001977.01;Name=MsG0180001977.01
Chr1 mRNA 30150147 30158471 30150147 ID=MsG0180001977.01.T01;Parent=MsG0180001977.01;Name=MsG0180001977.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.84|0.85|1|1|1|14|393|451
Chr1 exon 30150147 30150218 30150147 ID=MsG0180001977.01.T01:exon:42508;Parent=MsG0180001977.01.T01
Chr1 exon 30153956 30154020 30153956 ID=MsG0180001977.01.T01:exon:42509;Parent=MsG0180001977.01.T01
Chr1 exon 30154176 30154260 30154176 ID=MsG0180001977.01.T01:exon:42510;Parent=MsG0180001977.01.T01
Chr1 exon 30154360 30154486 30154360 ID=MsG0180001977.01.T01:exon:42511;Parent=MsG0180001977.01.T01
Chr1 exon 30154568 30154666 30154568 ID=MsG0180001977.01.T01:exon:42512;Parent=MsG0180001977.01.T01
Chr1 exon 30154756 30154823 30154756 ID=MsG0180001977.01.T01:exon:42513;Parent=MsG0180001977.01.T01
Chr1 exon 30154944 30155051 30154944 ID=MsG0180001977.01.T01:exon:42514;Parent=MsG0180001977.01.T01
Chr1 exon 30155155 30155232 30155155 ID=MsG0180001977.01.T01:exon:42515;Parent=MsG0180001977.01.T01
Chr1 exon 30155314 30155446 30155314 ID=MsG0180001977.01.T01:exon:42516;Parent=MsG0180001977.01.T01
Chr1 exon 30155539 30155635 30155539 ID=MsG0180001977.01.T01:exon:42517;Parent=MsG0180001977.01.T01
Chr1 exon 30157058 30157181 30157058 ID=MsG0180001977.01.T01:exon:42518;Parent=MsG0180001977.01.T01
Chr1 exon 30157266 30157374 30157266 ID=MsG0180001977.01.T01:exon:42519;Parent=MsG0180001977.01.T01
Chr1 exon 30157790 30157873 30157790 ID=MsG0180001977.01.T01:exon:42520;Parent=MsG0180001977.01.T01
Chr1 exon 30157972 30158471 30157972 ID=MsG0180001977.01.T01:exon:42521;Parent=MsG0180001977.01.T01
Chr1 CDS 30150147 30150218 30150147 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30153956 30154020 30153956 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30154176 30154260 30154176 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30154360 30154486 30154360 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30154568 30154666 30154568 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30154756 30154823 30154756 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30154944 30155051 30154944 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30155155 30155232 30155155 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30155314 30155446 30155314 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30155539 30155635 30155539 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30157058 30157181 30157058 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30157266 30157374 30157266 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30157790 30157873 30157790 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 CDS 30157972 30158078 30157972 ID=MsG0180001977.01.T01:cds;Parent=MsG0180001977.01.T01
Chr1 three_prime_UTR 30158079 30158471 30158079 ID=MsG0180001977.01.T01:three_prime_utr;Parent=MsG0180001977.01.T01
Gene Sequence

>MsG0180001977.01.T01

ATGGGTGTGGCAATTTTTGACATGAAAAAATATCTCTTCACAATTGAACTTGATGATCAATCTAAAAGTCAGGCTTCAGCATGTTTGGCGGGAGACAGTGCTGCTTATCACAGGACAGCTGCATTTGGGACGATGTATGCATATCGGACTGCTCTTTGCAAAGCTAAACGTGGTGGTTTCAAAGACACTCACGCTGATGATATCCTAGCTCCTGTTTTGAAGGCTGTAATAGAGAAAACCAACTTGAACCCAAGTGAAGTTGGAGATATTGTTGTCGGTTCTGTATTGGGAGCTGGATCTCAAAGAGCTAGTGAATGTCGAATGGCTGCATTTTATGCTGGTTTTCCTGAGACTGTGCCGGTTAGGACAGTTAACAGACAATGTTCATCTGGGCTACAAGCTGTTGCTGATGTAGCTGCTGCTATAAGGGCTGGATTTTATGATATTGGTATTGGTGCCGGTTTGGAATCCATGACAACTAATCCAATGGCATGGGATGGATCAGTGAATCCTAGAGTGAAAATGTTTGAACAAGCCCAAAACTGCCTCCTTCCAATGGGGATTACCTCTGAAAATGTTGCCAATCGCTTTGGAGTTTCAAGGAAAGAGCAAGATGAAGCTGCGGTTGAGTCTCACAGGCGAGCGGCTGCTGCTACTGCTGCTGGTAGATTTAAAGATGAAATCATTCCAGTTTCCACCAAGATTGTTGACCCAAAAACTGGCGAGGAGAAATCTGTCACCATTTCCGTTGATGATGGAATTCGACCCAACGCATCATTATCTGACCTAGGAAAGCTTAAAGCTGTGTTTAAGAAAGACGGAACCACCACTGCTGGTAATTCTAGCCAGGTGAGTGATGGTGCTGGAGCTGTTCTGCTGATGAAAAGAAGTATTGCAATGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGAGTTTCGTCGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCAGCTGCTGCAATTCCAGTTGCTGTGAAGGCTGCAGGTCTAGAGCTTGATGACATTGATCTTTTTGAAATAAATGAGGCTTTTGCTTCTCAGTTCGTATATTGCCGTAACAAGCTAGGACTTGATTCACAAAAGATCAATGTTAACGGAGGTGCAATGGCAATTGGGCATCCTTTGGGAGCAACAGGTGCTCGATGTGTAGCAACTCTATTGCATGAAATGAAGCGACGTGGCAAGGACTGCCGATATGGAGTAATATCCATGTGCATTGGTACTGGAATGGGGGCAGCTGCTGTTTTTGAGAGAGGTGATTCTGTTGATGAGCTCTGCAATGCCCGCAAAGGGGACAACCTTTTCCTATCCAAGGATGCTCGCTAG
Protein sequence

>MsG0180001977.01.T01

MGVAIFDMKKYLFTIELDDQSKSQASACLAGDSAAYHRTAAFGTMYAYRTALCKAKRGGFKDTHADDILAPVLKAVIEKTNLNPSEVGDIVVGSVLGAGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMAWDGSVNPRVKMFEQAQNCLLPMGITSENVANRFGVSRKEQDEAAVESHRRAAAATAAGRFKDEIIPVSTKIVDPKTGEEKSVTISVDDGIRPNASLSDLGKLKAVFKKDGTTTAGNSSQVSDGAGAVLLMKRSIAMQKGLPILGVFRSFVAVGVDPAIMGVGPAAAIPVAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDSQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRYGVISMCIGTGMGAAAVFERGDSVDELCNARKGDNLFLSKDAR*