AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002237.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002237.01.T01 MTR_3g018770 90.376 426 9 2 63 456 6 431 0.0 783
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002237.01.T01 AT3G61710 70.118 425 89 3 70 456 13 437 0.0 583
MsG0180002237.01.T01 AT3G61710 70.118 425 89 3 70 456 13 437 0.0 582
MsG0180002237.01.T01 AT3G61710 70.732 369 101 2 70 431 13 381 3.41e-180 509
MsG0180002237.01.T01 AT3G61710 71.885 313 81 2 126 431 1 313 6.80e-149 427

Find 105 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTACGCTTACTGGAATTT+TGG 0.113471 1:-35290247 None:intergenic
GGAGGAGAGAGATGCAATTT+TGG 0.238592 1:+35290098 MsG0180002237.01.T01:intron
AAGAGGTCGAAGATGTAAAT+AGG 0.243365 1:+35288364 MsG0180002237.01.T01:CDS
GACTCTTCCATTGTCTTTCC+AGG 0.250506 1:-35287954 None:intergenic
CGCAGAATTTGCCAAGTCTA+AGG 0.266773 1:+35293562 MsG0180002237.01.T01:CDS
TGTAATAATGCTTACTTATA+AGG 0.268314 1:-35293626 None:intergenic
TTGGTCCAGTCAACTTGTTC+TGG 0.268929 1:+35293486 MsG0180002237.01.T01:CDS
ATTTCTCATGATGGAGAGTT+TGG 0.279636 1:+35290192 MsG0180002237.01.T01:CDS
GATGAGAGAGACGACGAAAA+AGG 0.286671 1:+35286310 MsG0180002237.01.T01:CDS
ATCTAGCCGCTTCAAAGAAT+TGG 0.303262 1:+35289651 MsG0180002237.01.T01:CDS
TGTGATGAGCACTACTAAAA+TGG 0.311772 1:+35287851 MsG0180002237.01.T01:CDS
TTCAACGATCCTTCTCGTTC+TGG 0.342444 1:+35286439 MsG0180002237.01.T01:CDS
AAACTCTCCATCATGAGAAA+TGG 0.352132 1:-35290190 None:intergenic
TGAGCCTGAGGTCTTTGCTT+TGG 0.359710 1:-35287894 None:intergenic
GTTTCAATTGATTTCACATC+AGG 0.393088 1:+35289900 MsG0180002237.01.T01:CDS
GCCTTTCCCATTTCTCATGA+TGG 0.402011 1:+35290183 MsG0180002237.01.T01:CDS
AGCCTCGCTGAGGACATCTT+TGG 0.404226 1:-35288433 None:intergenic
CGCATGCAGTCAAGGCATAA+AGG 0.404256 1:-35288318 None:intergenic
TTTGAAAATTTAGGTAGAAT+GGG 0.411566 1:+35292241 MsG0180002237.01.T01:intron
AACTCTCCATCATGAGAAAT+GGG 0.416418 1:-35290189 None:intergenic
CCAACTTCCTTCATCAGGAT+TGG 0.423659 1:+35285201 MsG0180002237.01.T01:CDS
GTCTGACAAACTTGATAAAG+AGG 0.426905 1:+35288347 MsG0180002237.01.T01:CDS
TGCTTGTGAAACTTCAATCT+TGG 0.428703 1:-35290121 None:intergenic
AGGGGCCAACTTCCTTCATC+AGG 0.431309 1:+35285196 MsG0180002237.01.T01:CDS
TGGATCCGAATGTTCCCCGC+TGG 0.442758 1:+35286353 MsG0180002237.01.T01:CDS
CGCAATCCACTTTGCATCGT+CGG 0.445068 1:+35286391 MsG0180002237.01.T01:CDS
AGAGGTCGAAGATGTAAATA+GGG 0.451701 1:+35288365 MsG0180002237.01.T01:CDS
CAAACCCAGCGGGGAACATT+CGG 0.454576 1:-35286358 None:intergenic
AATCTGCGTCTGATGGAGGC+GGG 0.455975 1:+35288000 MsG0180002237.01.T01:CDS
CTTCCATTGTCTTTCCAGGA+TGG 0.469552 1:-35287950 None:intergenic
CACACTGCTAGCACCATGAA+TGG 0.472744 1:-35287832 None:intergenic
GAATCTGCGTCTGATGGAGG+CGG 0.475727 1:+35287999 MsG0180002237.01.T01:CDS
TTCCATTGTCTTTCCAGGAT+GGG 0.478645 1:-35287949 None:intergenic
CAATCTCAAATGCTCGAGTC+AGG 0.481760 1:-35288103 None:intergenic
TGAAGCCTGTCTTAAACGCT+TGG 0.485526 1:+35288401 MsG0180002237.01.T01:CDS
TGACTTGGATACCAATCGTC+TGG 0.489629 1:-35285227 None:intergenic
CCCCTCCAAGCGTTTAAGAC+AGG 0.494529 1:-35288406 None:intergenic
GGATCCGAATGTTCCCCGCT+GGG 0.494809 1:+35286354 MsG0180002237.01.T01:CDS
GGTAGCTTGAAACATTTCTC+TGG 0.496750 1:-35293605 None:intergenic
TAAATGTGTGTAGGGATGCA+AGG 0.500342 1:+35287804 MsG0180002237.01.T01:intron
ATCTGCGTCTGATGGAGGCG+GGG 0.501367 1:+35288001 MsG0180002237.01.T01:CDS
CGTGGTGATACTTCCCATCC+TGG 0.503769 1:+35287936 MsG0180002237.01.T01:CDS
AAGAAGGCAAGCTTGGCCCC+AGG 0.506324 1:-35292279 None:intergenic
AGCGGATCATTACCATGACT+TGG 0.506412 1:-35285242 None:intergenic
GGGGAAACTCATTGTCTCCG+GGG 0.509988 1:+35288021 MsG0180002237.01.T01:CDS
TCTGCGTCTGATGGAGGCGG+GGG 0.514763 1:+35288002 MsG0180002237.01.T01:CDS
TATGCAGAAGAAGGCAAGCT+TGG 0.514890 1:-35292286 None:intergenic
GTTCTCTTGATCCTTAGACT+TGG 0.518682 1:-35293573 None:intergenic
CATTTGCCACCTCATAACTC+TGG 0.520812 1:+35288059 MsG0180002237.01.T01:CDS
GCAGTTCTGACAAACCCAGC+GGG 0.522870 1:-35286368 None:intergenic
GGGATGAGATAAATGCTGCC+TGG 0.524441 1:+35292261 MsG0180002237.01.T01:CDS
CCAATCCTGATGAAGGAAGT+TGG 0.526941 1:-35285201 None:intergenic
AAGTCGGAATCTGCGTCTGA+TGG 0.536084 1:+35287993 MsG0180002237.01.T01:CDS
GGATGAGATAAATGCTGCCT+GGG 0.539884 1:+35292262 MsG0180002237.01.T01:CDS
GTGCTCCAGAACAAGTTGAC+TGG 0.540441 1:-35293491 None:intergenic
TAGCCGCTTCAAAGAATTGG+AGG 0.541238 1:+35289654 MsG0180002237.01.T01:CDS
AGCCTGTCTTAAACGCTTGG+AGG 0.542097 1:+35288404 MsG0180002237.01.T01:CDS
CTGGATTCCAATCCTGATGA+AGG 0.546048 1:-35285208 None:intergenic
GCCTGTCTTAAACGCTTGGA+GGG 0.547231 1:+35288405 MsG0180002237.01.T01:CDS
ATGCAAGGGTCATCCATTCA+TGG 0.547282 1:+35287819 MsG0180002237.01.T01:CDS
AGAAGAAAGAAGACTAGAAG+CGG 0.552430 1:+35289564 MsG0180002237.01.T01:CDS
CTTTCGCCTTTGCATTCAAG+CGG 0.553300 1:-35285260 None:intergenic
AAATGTGTGTAGGGATGCAA+GGG 0.554122 1:+35287805 MsG0180002237.01.T01:intron
GAAGTATCACCACGAGGCCG+AGG 0.564401 1:-35287927 None:intergenic
GGCACATTGTATGCAGAAGA+AGG 0.565635 1:-35292295 None:intergenic
CTGTCTTAAACGCTTGGAGG+GGG 0.566042 1:+35288407 MsG0180002237.01.T01:CDS
AGGATTGGAATCCAGACGAT+TGG 0.569320 1:+35285216 MsG0180002237.01.T01:CDS
TCGACGCCGACGATGCAAAG+TGG 0.572876 1:-35286397 None:intergenic
AAGCAAAGACCTCAGGCTCA+AGG 0.574216 1:+35287897 MsG0180002237.01.T01:CDS
GCTCCTCCAATTCTTTGAAG+CGG 0.574855 1:-35289657 None:intergenic
GTTGCCAAAGCAAAGACCTC+AGG 0.579073 1:+35287890 MsG0180002237.01.T01:CDS
TGAAGTAAATGCTGAACTGA+AGG 0.581360 1:+35289615 MsG0180002237.01.T01:CDS
GACGATTGGTATCCAAGTCA+TGG 0.585591 1:+35285230 MsG0180002237.01.T01:CDS
AGGCTCAAGGAGTTCCTCCT+CGG 0.586199 1:+35287910 MsG0180002237.01.T01:CDS
TTCCCATCCTGGAAAGACAA+TGG 0.588109 1:+35287947 MsG0180002237.01.T01:CDS
GAATTGAATCCAGAGTTATG+AGG 0.590276 1:-35288068 None:intergenic
AGCTTGAAACATTTCTCTGG+TGG 0.591769 1:-35293602 None:intergenic
GCGCACCTGCGTCTGTGTAG+TGG 0.591918 1:-35288126 None:intergenic
TCGGAATCTGCGTCTGATGG+AGG 0.592390 1:+35287996 MsG0180002237.01.T01:CDS
CCTGTCTTAAACGCTTGGAG+GGG 0.597661 1:+35288406 MsG0180002237.01.T01:CDS
GGAGGAACTCCTTGAGCCTG+AGG 0.598305 1:-35287906 None:intergenic
AATTGCAATGAAAATCTCAT+CGG 0.598768 1:+35286277 MsG0180002237.01.T01:CDS
AGGGTCGGAATCGGAGCTTA+CGG 0.599293 1:+35286330 MsG0180002237.01.T01:CDS
GGAGTTCCTCCTCGGCCTCG+TGG 0.607193 1:+35287918 MsG0180002237.01.T01:CDS
ACAAAACACGCATGCAGTCA+AGG 0.616478 1:-35288326 None:intergenic
AGGATCGTTGAAGTACTTGT+CGG 0.618370 1:-35286428 None:intergenic
TGACCACCATGATCAACCCC+CGG 0.629604 1:-35288038 None:intergenic
AATGATCCGCTTGAATGCAA+AGG 0.634690 1:+35285254 MsG0180002237.01.T01:CDS
TCCATCATGAGAAATGGGAA+AGG 0.638413 1:-35290184 None:intergenic
CAAATTCTGCGAAATCCTTG+AGG 0.638626 1:-35293550 None:intergenic
CGACGATGCAAAGTGGATTG+CGG 0.640313 1:-35286390 None:intergenic
AAATCTCATCGGTGCAAGAG+AGG 0.641636 1:+35286288 MsG0180002237.01.T01:CDS
GGGAAACTCATTGTCTCCGG+GGG 0.643396 1:+35288022 MsG0180002237.01.T01:CDS
GTCGGAATCGGAGCTTACGG+TGG 0.647326 1:+35286333 MsG0180002237.01.T01:CDS
GTATCACCACGAGGCCGAGG+AGG 0.655786 1:-35287924 None:intergenic
AGGAACTAACCAGAACGAGA+AGG 0.656031 1:-35286448 None:intergenic
TTGAATCCAGAGTTATGAGG+TGG 0.665081 1:-35288065 None:intergenic
TAAGAAAATCAGCCTCGCTG+AGG 0.688641 1:-35288443 None:intergenic
GGCCAAAGATGTCCTCAGCG+AGG 0.702573 1:+35288431 MsG0180002237.01.T01:CDS
GCTTCAAAGAATTGGAGGAG+CGG 0.703613 1:+35289659 MsG0180002237.01.T01:CDS
CAGTTCTGACAAACCCAGCG+GGG 0.715378 1:-35286367 None:intergenic
GGCAGTTCTGACAAACCCAG+CGG 0.718566 1:-35286369 None:intergenic
GATTGCCACTACACAGACGC+AGG 0.718689 1:+35288121 MsG0180002237.01.T01:CDS
GATGAGATAAATGCTGCCTG+GGG 0.771422 1:+35292263 MsG0180002237.01.T01:CDS
GGATGGGAAGTATCACCACG+AGG 0.788789 1:-35287933 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTAATATTTTAATATT+TGG + Chr1:35288241-35288260 MsG0180002237.01.T01:intron 0.0%
!! AACTTATTTATATATGTATA+TGG + Chr1:35291990-35292009 MsG0180002237.01.T01:intron 10.0%
!! ATATTTGCATATTAAAAAAA+TGG - Chr1:35290528-35290547 None:intergenic 10.0%
!! TAAACTAGAAAAAAAAAAAA+AGG - Chr1:35292182-35292201 None:intergenic 10.0%
!! TAAGTAGTAAATAATTAATT+AGG - Chr1:35289522-35289541 None:intergenic 10.0%
!!! ACATTTTACATATAATTTAT+TGG + Chr1:35292846-35292865 MsG0180002237.01.T01:intron 10.0%
!!! ATGTAATTTTTAAAAGTTTT+AGG - Chr1:35286123-35286142 None:intergenic 10.0%
!!! CAATTTATTTTTGTTAAATT+TGG + Chr1:35285948-35285967 MsG0180002237.01.T01:intron 10.0%
!!! CATTTTACATATAATTTATT+GGG + Chr1:35292847-35292866 MsG0180002237.01.T01:intron 10.0%
!!! TGCAATTTTTTAAATTTATA+GGG - Chr1:35286092-35286111 None:intergenic 10.0%
!!! TGTAATTTTTAAAAGTTTTA+GGG - Chr1:35286122-35286141 None:intergenic 10.0%
!!! TGTTGTTTTTAAAATATTTA+GGG + Chr1:35293197-35293216 MsG0180002237.01.T01:intron 10.0%
!!! TTATTTTAGTTAACATTATT+GGG + Chr1:35290779-35290798 MsG0180002237.01.T01:intron 10.0%
!!! TTGCAATTTTTTAAATTTAT+AGG - Chr1:35286093-35286112 None:intergenic 10.0%
!!! TTGTTGTTTTTAAAATATTT+AGG + Chr1:35293196-35293215 MsG0180002237.01.T01:intron 10.0%
!!! TTTATTTTAGTTAACATTAT+TGG + Chr1:35290778-35290797 MsG0180002237.01.T01:intron 10.0%
!!! TTTTCATTGTTAATAATTTT+AGG - Chr1:35286224-35286243 None:intergenic 10.0%
!!! TTTTTGATTTTTGAAAATTT+AGG + Chr1:35292232-35292251 MsG0180002237.01.T01:intron 10.0%
!! AAAAAATATTGATCAAATAG+CGG - Chr1:35291144-35291163 None:intergenic 15.0%
!! AAATAAGAATTTATTCAGTT+AGG - Chr1:35286692-35286711 None:intergenic 15.0%
!! AAATAAGAGAAAAACAATAA+AGG + Chr1:35291360-35291379 MsG0180002237.01.T01:intron 15.0%
!! ATAATATAAAATGTTGCATT+AGG + Chr1:35293288-35293307 MsG0180002237.01.T01:intron 15.0%
!! ATTGCAATTTATAAAACTTA+TGG - Chr1:35286153-35286172 None:intergenic 15.0%
!! CTACAAAATAAAATTTATCA+GGG - Chr1:35285672-35285691 None:intergenic 15.0%
!! TAATATAAAATGTTGCATTA+GGG + Chr1:35293289-35293308 MsG0180002237.01.T01:intron 15.0%
!! TCTACAAAATAAAATTTATC+AGG - Chr1:35285673-35285692 None:intergenic 15.0%
!! TTGAAAATATAATGTTGTTA+AGG - Chr1:35289707-35289726 None:intergenic 15.0%
!! TTGCAATTTATAAAACTTAT+GGG - Chr1:35286152-35286171 None:intergenic 15.0%
!!! AACTGATTAAATCTTTAAAA+TGG + Chr1:35285587-35285606 MsG0180002237.01.T01:intron 15.0%
!!! ATAACATTAAAATTTAAAGC+AGG - Chr1:35289364-35289383 None:intergenic 15.0%
!!! ATTCATAGAAAGTTTATTTT+GGG - Chr1:35289786-35289805 None:intergenic 15.0%
!!! CTATTTGATCAATATTTTTT+TGG + Chr1:35291144-35291163 MsG0180002237.01.T01:intron 15.0%
!!! GTAATTTTTAAAAGTTTTAG+GGG - Chr1:35286121-35286140 None:intergenic 15.0%
!!! GTTTTTTAATATAAATTTCG+TGG + Chr1:35287414-35287433 MsG0180002237.01.T01:intron 15.0%
!!! TAAGTTTTATAAATTGCAAT+TGG + Chr1:35286153-35286172 MsG0180002237.01.T01:intron 15.0%
!!! TAATTTTAAAACCATTTTGA+GGG - Chr1:35291681-35291700 None:intergenic 15.0%
!!! TACAACAATTTATTTTATGA+AGG - Chr1:35292070-35292089 None:intergenic 15.0%
!!! TATTAATTTTCTCAAGTATA+TGG + Chr1:35293025-35293044 MsG0180002237.01.T01:intron 15.0%
!!! TCAAAATGGTTTTAAAATTA+GGG + Chr1:35291681-35291700 MsG0180002237.01.T01:intron 15.0%
!!! TCTTTGTTTACAAAAATATT+AGG + Chr1:35291956-35291975 MsG0180002237.01.T01:intron 15.0%
!!! TGCTATTTTAACTTTTTTTT+TGG + Chr1:35287639-35287658 MsG0180002237.01.T01:intron 15.0%
!!! TGCTTTAAATTTTAATGTTA+TGG + Chr1:35289363-35289382 MsG0180002237.01.T01:intron 15.0%
!!! TGTATCAAAAATGAATTTTA+TGG + Chr1:35286584-35286603 MsG0180002237.01.T01:intron 15.0%
!!! TTTTTGAAATTTTTCCATAT+CGG - Chr1:35290435-35290454 None:intergenic 15.0%
!! AAATAATTCCAAATTAACTG+TGG - Chr1:35292712-35292731 None:intergenic 20.0%
!! AAGATTCTGAATAAAATGTA+AGG - Chr1:35289956-35289975 None:intergenic 20.0%
!! AAGTTTAACAACAATTCTAA+AGG - Chr1:35293427-35293446 None:intergenic 20.0%
!! ATCTAAAAAGTAATGAGTTA+AGG - Chr1:35292890-35292909 None:intergenic 20.0%
!! ATGTTTGATTCAACTTAAAT+TGG + Chr1:35288163-35288182 MsG0180002237.01.T01:intron 20.0%
!! ATTAACAATGAAAATCTCAT+TGG + Chr1:35286230-35286249 MsG0180002237.01.T01:intron 20.0%
!! CCATTCTTACTAAAAAAAAT+GGG - Chr1:35287357-35287376 None:intergenic 20.0%
!! CGAATAAAAATAATTCCTAT+GGG + Chr1:35292912-35292931 MsG0180002237.01.T01:intron 20.0%
!! GTAAAATGTAAAATGAAATG+TGG - Chr1:35292835-35292854 None:intergenic 20.0%
!! TAACATTATTGGGAAATATT+GGG + Chr1:35290789-35290808 MsG0180002237.01.T01:intron 20.0%
!! TACATATAATTTATTGGGAA+TGG + Chr1:35292852-35292871 MsG0180002237.01.T01:intron 20.0%
!! TATAGTTTATTCGATTGATT+TGG + Chr1:35286650-35286669 MsG0180002237.01.T01:intron 20.0%
!! TCCATTCTTACTAAAAAAAA+TGG - Chr1:35287358-35287377 None:intergenic 20.0%
!! TCGAATAAAAATAATTCCTA+TGG + Chr1:35292911-35292930 MsG0180002237.01.T01:intron 20.0%
!! TCTAAAAAGTAATGAGTTAA+GGG - Chr1:35292889-35292908 None:intergenic 20.0%
!! TGCAATTTATAAAACTTATG+GGG - Chr1:35286151-35286170 None:intergenic 20.0%
!! TTAACATTATTGGGAAATAT+TGG + Chr1:35290788-35290807 MsG0180002237.01.T01:intron 20.0%
!! TTCAAAATCAAAATTAGCAA+TGG - Chr1:35287669-35287688 None:intergenic 20.0%
!! TTTAATTATGTGTTAGCAAT+AGG + Chr1:35289036-35289055 MsG0180002237.01.T01:intron 20.0%
!! TTTCTTAATTCATATGAAAG+CGG + Chr1:35285546-35285565 MsG0180002237.01.T01:intron 20.0%
!! TTTGAAAATTTAGGTAGAAT+GGG + Chr1:35292241-35292260 MsG0180002237.01.T01:intron 20.0%
!! TTTGAATAGTATTAACAGAA+TGG + Chr1:35287683-35287702 MsG0180002237.01.T01:intron 20.0%
!!! AAGTTTTTGACAATATGTAT+CGG + Chr1:35285456-35285475 MsG0180002237.01.T01:intron 20.0%
!!! ATTCTAATTTTTGAAAACAC+TGG + Chr1:35289443-35289462 MsG0180002237.01.T01:intron 20.0%
!!! ATTGGAAATATACTAGTTTA+TGG + Chr1:35288181-35288200 MsG0180002237.01.T01:intron 20.0%
!!! ATTTCAAATTCTTAGCTTTT+TGG - Chr1:35285990-35286009 None:intergenic 20.0%
!!! CTAATTTTAAAACCATTTTG+AGG - Chr1:35291682-35291701 None:intergenic 20.0%
!!! CTCAAAATGGTTTTAAAATT+AGG + Chr1:35291680-35291699 MsG0180002237.01.T01:intron 20.0%
!!! GATTCATAGAAAGTTTATTT+TGG - Chr1:35289787-35289806 None:intergenic 20.0%
!!! GCATCAATTTTTAATAGATA+TGG - Chr1:35288995-35289014 None:intergenic 20.0%
!!! GTTTGAATGTTTTATGTATA+TGG + Chr1:35288280-35288299 MsG0180002237.01.T01:intron 20.0%
!!! TGTGAATATTTGTTATGATT+AGG + Chr1:35287603-35287622 MsG0180002237.01.T01:intron 20.0%
!!! TTCATAGAAAGTTTATTTTG+GGG - Chr1:35289785-35289804 None:intergenic 20.0%
!!! TTGGAACAATTAACAATTTT+CGG + Chr1:35290211-35290230 MsG0180002237.01.T01:CDS 20.0%
!!! TTTAAAATTAGGGTCAATTT+AGG + Chr1:35291691-35291710 MsG0180002237.01.T01:intron 20.0%
!!! TTTTGAAAATTTAGGTAGAA+TGG + Chr1:35292240-35292259 MsG0180002237.01.T01:intron 20.0%
! AAAAAAGGATACTGAAACTT+CGG - Chr1:35292332-35292351 None:intergenic 25.0%
! AAAAAAGTAATGAAGAACAG+AGG + Chr1:35291494-35291513 MsG0180002237.01.T01:intron 25.0%
! AAAAAGTAATGAAGAACAGA+GGG + Chr1:35291495-35291514 MsG0180002237.01.T01:intron 25.0%
! AAAAGTTTAGGTGAAATTTG+AGG - Chr1:35286181-35286200 None:intergenic 25.0%
! AAAATATTTCAATCAACAGG+AGG + Chr1:35290080-35290099 MsG0180002237.01.T01:intron 25.0%
! AAAATCCAAAGAGAGTAATA+AGG - Chr1:35286471-35286490 None:intergenic 25.0%
! AAACAGATTTCTACATTTGA+CGG + Chr1:35292452-35292471 MsG0180002237.01.T01:intron 25.0%
! AAAGTCATAAATATCATGCA+TGG + Chr1:35293061-35293080 MsG0180002237.01.T01:intron 25.0%
! AAAGTTAAAAAACAGAACAG+AGG + Chr1:35291398-35291417 MsG0180002237.01.T01:intron 25.0%
! AAAGTTTAGGTGAAATTTGA+GGG - Chr1:35286180-35286199 None:intergenic 25.0%
! AACATTATTGGGAAATATTG+GGG + Chr1:35290790-35290809 MsG0180002237.01.T01:intron 25.0%
! AAGATTTAATCAGTTGCATT+AGG - Chr1:35285582-35285601 None:intergenic 25.0%
! AATAAAGCTAACACAACTTT+GGG - Chr1:35289104-35289123 None:intergenic 25.0%
! AATTATAACCACATCAAATG+AGG - Chr1:35292114-35292133 None:intergenic 25.0%
! AATTGCAATGAAAATCTCAT+CGG + Chr1:35286277-35286296 MsG0180002237.01.T01:CDS 25.0%
! ACAAAAGACAAATATAAGGA+TGG + Chr1:35291307-35291326 MsG0180002237.01.T01:intron 25.0%
! ACTGCTATATTATATCCAAA+AGG + Chr1:35290674-35290693 MsG0180002237.01.T01:intron 25.0%
! AGATTTAATCAGTTGCATTA+GGG - Chr1:35285581-35285600 None:intergenic 25.0%
! AGTATTATACCAACATAGTT+TGG + Chr1:35287265-35287284 MsG0180002237.01.T01:intron 25.0%
! ATATAGCAAGAAACACATAA+CGG - Chr1:35288595-35288614 None:intergenic 25.0%
! ATTATAACCACATCAAATGA+GGG - Chr1:35292113-35292132 None:intergenic 25.0%
! ATTTCACAACAGATTACTTA+TGG - Chr1:35288705-35288724 None:intergenic 25.0%
! CAAGACAAATTAAAACATGA+CGG - Chr1:35288921-35288940 None:intergenic 25.0%
! CTGATATACTTGATGAAAAA+AGG - Chr1:35292347-35292366 None:intergenic 25.0%
! GCAAAAATATTTCAATCAAC+AGG + Chr1:35290077-35290096 MsG0180002237.01.T01:intron 25.0%
! GGATTTAATAAATGTGTGTA+GGG + Chr1:35287796-35287815 MsG0180002237.01.T01:intron 25.0%
! TAAAACTTCGAGATTGAAAA+GGG - Chr1:35289020-35289039 None:intergenic 25.0%
! TATAATGTTGTTAAGGACAA+AGG - Chr1:35289700-35289719 None:intergenic 25.0%
! TATGTATATGGATAACTAAC+TGG + Chr1:35292002-35292021 MsG0180002237.01.T01:intron 25.0%
! TCAAAAATCAAGATACGATA+CGG + Chr1:35290448-35290467 MsG0180002237.01.T01:intron 25.0%
! TCCAAATTCAAAGAAAGAAT+CGG - Chr1:35286520-35286539 None:intergenic 25.0%
! TCCAACAAAAGACAAATATA+AGG + Chr1:35291303-35291322 MsG0180002237.01.T01:intron 25.0%
! TCTACAATATGTATCAACAT+AGG + Chr1:35285329-35285348 MsG0180002237.01.T01:intron 25.0%
! TGATTTCAATCACTATAACT+CGG - Chr1:35292501-35292520 None:intergenic 25.0%
! TGTATCAACATAGGATTAAA+TGG + Chr1:35285338-35285357 MsG0180002237.01.T01:intron 25.0%
! TTAAAACTTCGAGATTGAAA+AGG - Chr1:35289021-35289040 None:intergenic 25.0%
! TTTATCAGGGAAAAATATTG+TGG - Chr1:35285659-35285678 None:intergenic 25.0%
!! ATTTGTCTTTTGTTGGAATT+CGG - Chr1:35291300-35291319 None:intergenic 25.0%
!! ATTTTCTAGACACTATAATG+TGG + Chr1:35292663-35292682 MsG0180002237.01.T01:intron 25.0%
!! GAGATTTTCATTGCAATTTA+AGG - Chr1:35286275-35286294 None:intergenic 25.0%
!! GTGAAATACTTTTGTGTTTT+TGG - Chr1:35285768-35285787 None:intergenic 25.0%
!! TCCTTATATTTGTCTTTTGT+TGG - Chr1:35291307-35291326 None:intergenic 25.0%
!! TGTTTTATGTATATGGTTTC+AGG + Chr1:35288287-35288306 MsG0180002237.01.T01:intron 25.0%
!! TTATGTGTTTCTTGCTATAT+TGG + Chr1:35288595-35288614 MsG0180002237.01.T01:intron 25.0%
!! TTTTCAGTATCTTGAACTAT+GGG - Chr1:35289740-35289759 None:intergenic 25.0%
!! TTTTCTTAAGGAGAAATTGA+AGG + Chr1:35288458-35288477 MsG0180002237.01.T01:CDS 25.0%
!!! AACAGAATGGTTTTATTTTC+TGG + Chr1:35287696-35287715 MsG0180002237.01.T01:intron 25.0%
!!! ATACTTTTGTGTTTTTGGAT+TGG - Chr1:35285763-35285782 None:intergenic 25.0%
!!! ATTTGTTAGTTTCTTTTGGA+GGG + Chr1:35289231-35289250 MsG0180002237.01.T01:intron 25.0%
!!! CAAGTTGGTTATTTCAAATT+TGG - Chr1:35285397-35285416 None:intergenic 25.0%
!!! CCCATTTTTTTTAGTAAGAA+TGG + Chr1:35287354-35287373 MsG0180002237.01.T01:intron 25.0%
!!! CTTTTTTCTTATAGTGTGTA+CGG + Chr1:35289806-35289825 MsG0180002237.01.T01:intron 25.0%
!!! GAAGTAAAGTGTCTTATTTT+TGG - Chr1:35285790-35285809 None:intergenic 25.0%
!!! GAATATGATTTTTTCTTGCA+TGG + Chr1:35292560-35292579 MsG0180002237.01.T01:intron 25.0%
!!! GGTTATAATTTTTTATCCTG+AGG + Chr1:35292124-35292143 MsG0180002237.01.T01:intron 25.0%
!!! GGTTATTTGTTAGTTTCTTT+TGG + Chr1:35289227-35289246 MsG0180002237.01.T01:intron 25.0%
!!! GTTTGCTTTGTTTGAATTTA+TGG + Chr1:35288569-35288588 MsG0180002237.01.T01:intron 25.0%
!!! TATTACTTAACTGTTGCTTT+AGG + Chr1:35288512-35288531 MsG0180002237.01.T01:intron 25.0%
!!! TATTTGTTAGTTTCTTTTGG+AGG + Chr1:35289230-35289249 MsG0180002237.01.T01:intron 25.0%
!!! TCATAGAAAGTTTATTTTGG+GGG - Chr1:35289784-35289803 None:intergenic 25.0%
!!! TGGATATAGTGTTTCTTTTT+TGG - Chr1:35290728-35290747 None:intergenic 25.0%
!!! TGTTATTGTTGATTCACTAT+CGG + Chr1:35287548-35287567 MsG0180002237.01.T01:intron 25.0%
!!! TTGTTGATTTAGTAGACAAA+GGG + Chr1:35287390-35287409 MsG0180002237.01.T01:intron 25.0%
!!! TTTGTTGATTTAGTAGACAA+AGG + Chr1:35287389-35287408 MsG0180002237.01.T01:intron 25.0%
!!! TTTTTCAGTATCTTGAACTA+TGG - Chr1:35289741-35289760 None:intergenic 25.0%
AAAAAGAGAACAATGAACAG+AGG + Chr1:35291521-35291540 MsG0180002237.01.T01:intron 30.0%
AAAACCGAAGCCATTAATAA+TGG - Chr1:35293460-35293479 None:intergenic 30.0%
AAACATACACATCCCTAATT+GGG - Chr1:35289064-35289083 None:intergenic 30.0%
AAATCACATATTTCCTACAG+AGG - Chr1:35288964-35288983 None:intergenic 30.0%
AAATTGTATCCGAGTGAATT+TGG - Chr1:35288781-35288800 None:intergenic 30.0%
AACCATAAATGAAAAGACAG+AGG + Chr1:35291427-35291446 MsG0180002237.01.T01:intron 30.0%
AATTCAAACAAAGCAAACAG+AGG - Chr1:35288567-35288586 None:intergenic 30.0%
AATTCCAAATTAACTGTGGT+TGG - Chr1:35292708-35292727 None:intergenic 30.0%
ACAGAGGTTATGAATACTTA+TGG - Chr1:35288551-35288570 None:intergenic 30.0%
AGATGGAGTTGAGAAAATTT+AGG + Chr1:35291633-35291652 MsG0180002237.01.T01:intron 30.0%
ATCAACATAGGATTAAATGG+AGG + Chr1:35285341-35285360 MsG0180002237.01.T01:intron 30.0%
ATCTATAACTCGATACCAAA+GGG - Chr1:35289264-35289283 None:intergenic 30.0%
ATGAAGTGAAACTTACAAGA+TGG + Chr1:35292794-35292813 MsG0180002237.01.T01:intron 30.0%
ATGATTTATTCATGACGAAG+AGG + Chr1:35287474-35287493 MsG0180002237.01.T01:intron 30.0%
CAAAGAAAAAAAGAGAACAG+AGG + Chr1:35291452-35291471 MsG0180002237.01.T01:intron 30.0%
CAATAAAGCTAACACAACTT+TGG - Chr1:35289105-35289124 None:intergenic 30.0%
CATAATATATGTAGCGTTTG+GGG - Chr1:35285928-35285947 None:intergenic 30.0%
CATACCATTATTAATGGCTT+CGG + Chr1:35293453-35293472 MsG0180002237.01.T01:intron 30.0%
CATTGTTTGTTTGGAGATTT+GGG + Chr1:35289390-35289409 MsG0180002237.01.T01:intron 30.0%
CTGATGTTGGATATAAATAG+AGG + Chr1:35289176-35289195 MsG0180002237.01.T01:intron 30.0%
CTTCCAAATCAAATATGTCA+TGG - Chr1:35288848-35288867 None:intergenic 30.0%
GAATAACAGAAAGAGAACAT+GGG - Chr1:35289304-35289323 None:intergenic 30.0%
GATGGAGTTGAGAAAATTTA+GGG + Chr1:35291634-35291653 MsG0180002237.01.T01:intron 30.0%
GCATAATATATGTAGCGTTT+GGG - Chr1:35285929-35285948 None:intergenic 30.0%
GGACAACAGTTAATAAACTT+TGG - Chr1:35292594-35292613 None:intergenic 30.0%
GGCTTTCAAAGAAAACATAA+TGG - Chr1:35289501-35289520 None:intergenic 30.0%
GGGATTTAATAAATGTGTGT+AGG + Chr1:35287795-35287814 MsG0180002237.01.T01:intron 30.0%
GTCTACCATACCATTATTAA+TGG + Chr1:35293447-35293466 MsG0180002237.01.T01:intron 30.0%
TAGTTCCTTATTACTCTCTT+TGG + Chr1:35286463-35286482 MsG0180002237.01.T01:intron 30.0%
TATGGCTATCATTGTTTGTT+TGG + Chr1:35289381-35289400 MsG0180002237.01.T01:intron 30.0%
TCATTGTTTGTTTGGAGATT+TGG + Chr1:35289389-35289408 MsG0180002237.01.T01:intron 30.0%
TCTTCAAATCCAAACTATGT+TGG - Chr1:35287277-35287296 None:intergenic 30.0%
TGATTAAGACATGTGAATGT+TGG - Chr1:35291260-35291279 None:intergenic 30.0%
TGCATAATATATGTAGCGTT+TGG - Chr1:35285930-35285949 None:intergenic 30.0%
TTAAACACCAGAGTAAACTT+TGG + Chr1:35293163-35293182 MsG0180002237.01.T01:intron 30.0%
TTCCTGCTAAAATTCAATAG+CGG + Chr1:35291718-35291737 MsG0180002237.01.T01:intron 30.0%
TTTGAAAACACATTCCATGT+TGG + Chr1:35288636-35288655 MsG0180002237.01.T01:intron 30.0%
! AACACTAACAATGTTCCTTT+TGG - Chr1:35290692-35290711 None:intergenic 30.0%
! ACAATTAACAATTTTCGGCT+TGG + Chr1:35290216-35290235 MsG0180002237.01.T01:CDS 30.0%
! ACTTCTGATCATGTGTTTTA+TGG + Chr1:35291599-35291618 MsG0180002237.01.T01:intron 30.0%
! ATGCGAAGATGTTGTTTATA+AGG + Chr1:35291847-35291866 MsG0180002237.01.T01:intron 30.0%
! ATTTCAATTTGTCTGCGTTT+TGG + Chr1:35293121-35293140 MsG0180002237.01.T01:intron 30.0%
! GATTTTTCCAAAAAATCGAC+AGG - Chr1:35290031-35290050 None:intergenic 30.0%
! GTTTCAATTGATTTCACATC+AGG + Chr1:35289900-35289919 MsG0180002237.01.T01:CDS 30.0%
! TAGTGTGCTGATATAGAATT+GGG + Chr1:35287775-35287794 MsG0180002237.01.T01:intron 30.0%
! TGTCTTTTCATTTATGGTTC+TGG - Chr1:35291426-35291445 None:intergenic 30.0%
! TTAGTGTGCTGATATAGAAT+TGG + Chr1:35287774-35287793 MsG0180002237.01.T01:intron 30.0%
! TTCCTCTGTCTTTTCATTTA+TGG - Chr1:35291432-35291451 None:intergenic 30.0%
! TTCTGTTATTCGCTAGTTTA+TGG + Chr1:35289313-35289332 MsG0180002237.01.T01:intron 30.0%
! TTTTCCAACCACAGTTAATT+TGG + Chr1:35292701-35292720 MsG0180002237.01.T01:intron 30.0%
! TTTTGGTCAAGTAACTTAGT+GGG + Chr1:35285886-35285905 MsG0180002237.01.T01:intron 30.0%
!! CAAAGTTGTGTTAGCTTTAT+TGG + Chr1:35289103-35289122 MsG0180002237.01.T01:intron 30.0%
!! TTGTGTTAGCTTTATTGGTT+AGG + Chr1:35289108-35289127 MsG0180002237.01.T01:intron 30.0%
!! TTTTTGGTCAAGTAACTTAG+TGG + Chr1:35285885-35285904 MsG0180002237.01.T01:intron 30.0%
!!! AGTACTGATGTGTTCTTTTT+TGG - Chr1:35290748-35290767 None:intergenic 30.0%
AAAAGAACACATCAGTACTC+AGG + Chr1:35290749-35290768 MsG0180002237.01.T01:intron 35.0%
AAACTCTCCATCATGAGAAA+TGG - Chr1:35290193-35290212 None:intergenic 35.0%
AACTCTCCATCATGAGAAAT+GGG - Chr1:35290192-35290211 None:intergenic 35.0%
AAGAGGTCGAAGATGTAAAT+AGG + Chr1:35288364-35288383 MsG0180002237.01.T01:CDS 35.0%
AATATGTCATGGCTCTTGAA+AGG - Chr1:35288837-35288856 None:intergenic 35.0%
AATCAGATGTACTAGCTGAT+TGG + Chr1:35293089-35293108 MsG0180002237.01.T01:intron 35.0%
AATGAACAGAGGAAGATAGA+TGG + Chr1:35291532-35291551 MsG0180002237.01.T01:intron 35.0%
ACCAAATAGAATATCACCAC+AGG - Chr1:35293347-35293366 None:intergenic 35.0%
AGAAGAAAGAAGACTAGAAG+CGG + Chr1:35289564-35289583 MsG0180002237.01.T01:CDS 35.0%
AGAGGTAATCGATGCATTTA+AGG + Chr1:35287084-35287103 MsG0180002237.01.T01:intron 35.0%
AGAGGTCGAAGATGTAAATA+GGG + Chr1:35288365-35288384 MsG0180002237.01.T01:CDS 35.0%
ATAACCAACTTGAGCAACAT+AGG + Chr1:35285405-35285424 MsG0180002237.01.T01:intron 35.0%
ATACAATGTGCCAGTATTTC+CGG + Chr1:35292306-35292325 MsG0180002237.01.T01:intron 35.0%
ATACTCTTCTGATACGTATC+GGG + Chr1:35290910-35290929 MsG0180002237.01.T01:intron 35.0%
ATAGAGGCAGAGAATGTAAA+TGG + Chr1:35289192-35289211 MsG0180002237.01.T01:intron 35.0%
ATAGGATTAAATGGAGGAAG+TGG + Chr1:35285347-35285366 MsG0180002237.01.T01:intron 35.0%
ATGGTCCAGTTCTATCAAAA+TGG + Chr1:35289332-35289351 MsG0180002237.01.T01:intron 35.0%
CAAACATACACATCCCTAAT+TGG - Chr1:35289065-35289084 None:intergenic 35.0%
CATCTATAACTCGATACCAA+AGG - Chr1:35289265-35289284 None:intergenic 35.0%
CATGACGAAGAGGTAAATAA+TGG + Chr1:35287484-35287503 MsG0180002237.01.T01:intron 35.0%
CCTTCTACAAAAATGCAAGA+GGG + Chr1:35285177-35285196 MsG0180002237.01.T01:CDS 35.0%
CGAAGCCATTAATAATGGTA+TGG - Chr1:35293455-35293474 None:intergenic 35.0%
CGAATAACAGAAAGAGAACA+TGG - Chr1:35289305-35289324 None:intergenic 35.0%
CTTCTACAAAAATGCAAGAG+GGG + Chr1:35285178-35285197 MsG0180002237.01.T01:CDS 35.0%
CTTGAGATTAAGAACAACAG+AGG - Chr1:35292158-35292177 None:intergenic 35.0%
GAATTGAATCCAGAGTTATG+AGG - Chr1:35288071-35288090 None:intergenic 35.0%
GAGCCATGACATATTTGATT+TGG + Chr1:35288842-35288861 MsG0180002237.01.T01:intron 35.0%
GATACTCTTCTGATACGTAT+CGG + Chr1:35290909-35290928 MsG0180002237.01.T01:intron 35.0%
GCGTATGCATAAGCTATATT+TGG + Chr1:35286732-35286751 MsG0180002237.01.T01:intron 35.0%
GGTTAAGGCAAAAAAGATAG+AGG + Chr1:35287066-35287085 MsG0180002237.01.T01:intron 35.0%
GTAAAGACCGATGTTCTATT+TGG - Chr1:35286938-35286957 None:intergenic 35.0%
GTCTGACAAACTTGATAAAG+AGG + Chr1:35288347-35288366 MsG0180002237.01.T01:CDS 35.0%
GTTTGCATTTATGTGTGCAA+GGG + Chr1:35287029-35287048 MsG0180002237.01.T01:intron 35.0%
TACAGATCCAAAGTTTACTC+TGG - Chr1:35293173-35293192 None:intergenic 35.0%
TACTCTACGTTAGTACAAGA+TGG + Chr1:35292747-35292766 MsG0180002237.01.T01:intron 35.0%
TAGAGGCAGAGAATGTAAAT+GGG + Chr1:35289193-35289212 MsG0180002237.01.T01:intron 35.0%
TCCTCAAAATACCCTCAAAA+TGG + Chr1:35291667-35291686 MsG0180002237.01.T01:intron 35.0%
TGAAGTAAATGCTGAACTGA+AGG + Chr1:35289615-35289634 MsG0180002237.01.T01:CDS 35.0%
TGCTTGTGAAACTTCAATCT+TGG - Chr1:35290124-35290143 None:intergenic 35.0%
TGGTCCAGTTCTATCAAAAT+GGG + Chr1:35289333-35289352 MsG0180002237.01.T01:intron 35.0%
TGGTGATATGTTCAACTTCA+TGG + Chr1:35292022-35292041 MsG0180002237.01.T01:intron 35.0%
TGTAGTGCAATTCAACACAA+GGG - Chr1:35292615-35292634 None:intergenic 35.0%
TGTGATGAGCACTACTAAAA+TGG + Chr1:35287851-35287870 MsG0180002237.01.T01:CDS 35.0%
TGTTTGCATTTATGTGTGCA+AGG + Chr1:35287028-35287047 MsG0180002237.01.T01:intron 35.0%
TTCTAGACACTATAATGTGG+TGG + Chr1:35292666-35292685 MsG0180002237.01.T01:intron 35.0%
TTGTAGTGCAATTCAACACA+AGG - Chr1:35292616-35292635 None:intergenic 35.0%
TTTACATGTCTATGTGTAGC+AGG + Chr1:35289851-35289870 MsG0180002237.01.T01:intron 35.0%
TTTGGTCAAGTAACTTAGTG+GGG + Chr1:35285887-35285906 MsG0180002237.01.T01:intron 35.0%
! AACAACATTTTCGCATATGC+TGG - Chr1:35291022-35291041 None:intergenic 35.0%
! ATGTGCTGTTAAGCTCAATA+TGG + Chr1:35290300-35290319 MsG0180002237.01.T01:intron 35.0%
! ATTTCTCATGATGGAGAGTT+TGG + Chr1:35290192-35290211 MsG0180002237.01.T01:CDS 35.0%
! ATTTTTCCATATCGGCGTAT+CGG - Chr1:35290427-35290446 None:intergenic 35.0%
! CCTCTTGCATTTTTGTAGAA+GGG - Chr1:35285179-35285198 None:intergenic 35.0%
! CTTTGGTATCGAGTTATAGA+TGG + Chr1:35289263-35289282 MsG0180002237.01.T01:intron 35.0%
! GCCGATTCTTTCTTTGAATT+TGG + Chr1:35286516-35286535 MsG0180002237.01.T01:intron 35.0%
! TGTAAATGGGTTCAGTTAGT+TGG + Chr1:35289206-35289225 MsG0180002237.01.T01:intron 35.0%
! TTGCATTTTTGTAGAAGGGA+GGG - Chr1:35285175-35285194 None:intergenic 35.0%
!! ATCCGCTATTGAATTTTAGC+AGG - Chr1:35291723-35291742 None:intergenic 35.0%
!! GTAACCCATTTTGATAGAAC+TGG - Chr1:35289340-35289359 None:intergenic 35.0%
!! TTTTGTGGTAGTGTACAAGT+CGG + Chr1:35287977-35287996 MsG0180002237.01.T01:CDS 35.0%
!!! AAAGTTTATTTTGGGGGTTG+AGG - Chr1:35289778-35289797 None:intergenic 35.0%
!!! AAGCGTAGCATGTTGTTTTA+TGG + Chr1:35290260-35290279 MsG0180002237.01.T01:intron 35.0%
!!! AAGTTTATTTTGGGGGTTGA+GGG - Chr1:35289777-35289796 None:intergenic 35.0%
!!! ACCATTTTGAGGGTATTTTG+AGG - Chr1:35291671-35291690 None:intergenic 35.0%
!!! AGCGTAGCATGTTGTTTTAT+GGG + Chr1:35290261-35290280 MsG0180002237.01.T01:intron 35.0%
!!! ATTGTTTTTAGCATGCCTCA+AGG + Chr1:35293535-35293554 MsG0180002237.01.T01:CDS 35.0%
!!! GTGTTTTTGGATTGGATTTG+TGG - Chr1:35285755-35285774 None:intergenic 35.0%
AAACAACATGCTACGCTTAC+TGG - Chr1:35290258-35290277 None:intergenic 40.0%
AAATGTGTGTAGGGATGCAA+GGG + Chr1:35287805-35287824 MsG0180002237.01.T01:intron 40.0%
AACAGAGGAGAAAATTCCTC+AGG - Chr1:35292143-35292162 None:intergenic 40.0%
AACATCGGTCTTTACTAGCT+GGG + Chr1:35286943-35286962 MsG0180002237.01.T01:intron 40.0%
AATGATCCGCTTGAATGCAA+AGG + Chr1:35285254-35285273 MsG0180002237.01.T01:CDS 40.0%
ACATCAGCTACCAAAGTTAG+AGG - Chr1:35289163-35289182 None:intergenic 40.0%
AGCATTTCACCTCATAACTC+TGG + Chr1:35288660-35288679 MsG0180002237.01.T01:intron 40.0%
AGCTTGAAACATTTCTCTGG+TGG - Chr1:35293605-35293624 None:intergenic 40.0%
ATACGAGATACGATACGGAT+AGG + Chr1:35290393-35290412 MsG0180002237.01.T01:intron 40.0%
ATACTCTCCTGATACGTATC+GGG + Chr1:35290840-35290859 MsG0180002237.01.T01:intron 40.0%
ATCTAGCCGCTTCAAAGAAT+TGG + Chr1:35289651-35289670 MsG0180002237.01.T01:CDS 40.0%
ATGAGAGAGACGACGAAAAA+GGG + Chr1:35286311-35286330 MsG0180002237.01.T01:CDS 40.0%
CAAATTCTGCGAAATCCTTG+AGG - Chr1:35293553-35293572 None:intergenic 40.0%
CAGAAGTGAAAACACGATCT+GGG - Chr1:35291586-35291605 None:intergenic 40.0%
CAGATTTCTACATTTGACGG+TGG + Chr1:35292455-35292474 MsG0180002237.01.T01:intron 40.0%
CAGCATCTTGAGCAAATGTT+TGG + Chr1:35288204-35288223 MsG0180002237.01.T01:intron 40.0%
CATACCAGACCAAATTCACT+CGG + Chr1:35288769-35288788 MsG0180002237.01.T01:intron 40.0%
CATCAGCTACCAAAGTTAGA+GGG - Chr1:35289162-35289181 None:intergenic 40.0%
CCAAAAGATGATTCCTCTGT+AGG + Chr1:35288948-35288967 MsG0180002237.01.T01:intron 40.0%
CCCTTCTACAAAAATGCAAG+AGG + Chr1:35285176-35285195 MsG0180002237.01.T01:CDS 40.0%
CGTCATCCCTATTGAAGTAT+CGG + Chr1:35290978-35290997 MsG0180002237.01.T01:intron 40.0%
GATACTCTCCTGATACGTAT+CGG + Chr1:35290839-35290858 MsG0180002237.01.T01:intron 40.0%
GCCTGTGGTGATATTCTATT+TGG + Chr1:35293343-35293362 MsG0180002237.01.T01:intron 40.0%
GCTATCATAGTAGTCAATCC+TGG + Chr1:35291057-35291076 MsG0180002237.01.T01:intron 40.0%
GCTGTTAAGCTCAATATGGA+TGG + Chr1:35290304-35290323 MsG0180002237.01.T01:intron 40.0%
GGTAGCTTGAAACATTTCTC+TGG - Chr1:35293608-35293627 None:intergenic 40.0%
GTAGACAAGTTCACATAAGC+CGG + Chr1:35286911-35286930 MsG0180002237.01.T01:intron 40.0%
GTTAGTTAGCCCTCTAACTT+TGG + Chr1:35289150-35289169 MsG0180002237.01.T01:intron 40.0%
GTTCTCTTGATCCTTAGACT+TGG - Chr1:35293576-35293595 None:intergenic 40.0%
TAAATGTGTGTAGGGATGCA+AGG + Chr1:35287804-35287823 MsG0180002237.01.T01:intron 40.0%
TAACCACATCAAATGAGGGA+AGG - Chr1:35292109-35292128 None:intergenic 40.0%
TACTGCTATAGCAGCTATAG+TGG + Chr1:35291753-35291772 MsG0180002237.01.T01:intron 40.0%
TAGCAATAGGTGCCCAATTA+GGG + Chr1:35289049-35289068 MsG0180002237.01.T01:intron 40.0%
TAGTCAATAGTGCGCTATAG+CGG - Chr1:35291810-35291829 None:intergenic 40.0%
TAGTGAAACATGAAGTGACG+AGG + Chr1:35285696-35285715 MsG0180002237.01.T01:intron 40.0%
TATAGCTGCTATAGCAGTAG+CGG - Chr1:35291752-35291771 None:intergenic 40.0%
TCAGAAGTGAAAACACGATC+TGG - Chr1:35291587-35291606 None:intergenic 40.0%
TCCATCATGAGAAATGGGAA+AGG - Chr1:35290187-35290206 None:intergenic 40.0%
TCGAGGAGGAGAAAAAATAG+CGG + Chr1:35287000-35287019 MsG0180002237.01.T01:intron 40.0%
TGAATGCAAAGGCGAAAGTT+CGG + Chr1:35285265-35285284 MsG0180002237.01.T01:intron 40.0%
TGACGAGGAAAGTTGAAGAA+TGG + Chr1:35285711-35285730 MsG0180002237.01.T01:intron 40.0%
TGTCTATGTGTAGCAGGTAT+TGG + Chr1:35289857-35289876 MsG0180002237.01.T01:intron 40.0%
TTAGCAATAGGTGCCCAATT+AGG + Chr1:35289048-35289067 MsG0180002237.01.T01:intron 40.0%
TTAGCAGGATAGCGTATAGT+GGG + Chr1:35291114-35291133 MsG0180002237.01.T01:intron 40.0%
TTATGCCTGTGGTGATATTG+TGG + Chr1:35293247-35293266 MsG0180002237.01.T01:intron 40.0%
TTATTGGGAAATATTGGGGC+AGG + Chr1:35290794-35290813 MsG0180002237.01.T01:intron 40.0%
TTCCATTGTCTTTCCAGGAT+GGG - Chr1:35287952-35287971 None:intergenic 40.0%
TTGAATCCAGAGTTATGAGG+TGG - Chr1:35288068-35288087 None:intergenic 40.0%
TTGATACGCCTGAAAATGCA+CGG - Chr1:35285438-35285457 None:intergenic 40.0%
TTTAGCAGGATAGCGTATAG+TGG + Chr1:35291113-35291132 MsG0180002237.01.T01:intron 40.0%
! AAACCCAAACAAGCGTTTTG+TGG + Chr1:35285625-35285644 MsG0180002237.01.T01:intron 40.0%
! AACCCAAACAAGCGTTTTGT+GGG + Chr1:35285626-35285645 MsG0180002237.01.T01:intron 40.0%
! AATATTTAGGGTTGTGCCCT+TGG + Chr1:35293209-35293228 MsG0180002237.01.T01:intron 40.0%
! ACATTTTCGCATATGCTGGT+AGG - Chr1:35291018-35291037 None:intergenic 40.0%
! AGGATCGTTGAAGTACTTGT+CGG - Chr1:35286431-35286450 None:intergenic 40.0%
! ATTAATGGCTTCGGTTTTGC+AGG + Chr1:35293462-35293481 MsG0180002237.01.T01:intron 40.0%
! CCCTCTTGCATTTTTGTAGA+AGG - Chr1:35285180-35285199 None:intergenic 40.0%
! CCTACAGAGGAATCATCTTT+TGG - Chr1:35288951-35288970 None:intergenic 40.0%
! CTAACTTTGGTAGCTGATGT+TGG + Chr1:35289163-35289182 MsG0180002237.01.T01:intron 40.0%
! CTACGCTTACTGGAATTTTG+GGG - Chr1:35290248-35290267 None:intergenic 40.0%
! CTTGCATTTTTGTAGAAGGG+AGG - Chr1:35285176-35285195 None:intergenic 40.0%
! GACAATGGAAGAGTCTTTTG+TGG + Chr1:35287962-35287981 MsG0180002237.01.T01:CDS 40.0%
! GCTACGCTTACTGGAATTTT+GGG - Chr1:35290249-35290268 None:intergenic 40.0%
! GGATGGTTTGATTTCATCGT+TGG + Chr1:35290321-35290340 MsG0180002237.01.T01:intron 40.0%
! GTCATCCCTATTGAAGTATC+GGG + Chr1:35290979-35290998 MsG0180002237.01.T01:intron 40.0%
! TATCCTGCTAAACCCCTTTT+GGG - Chr1:35291105-35291124 None:intergenic 40.0%
! TGATACGTATCGGGAAGTAT+CGG + Chr1:35290849-35290868 MsG0180002237.01.T01:intron 40.0%
! TGCTACGCTTACTGGAATTT+TGG - Chr1:35290250-35290269 None:intergenic 40.0%
!! ACTTTTTCCCTGTGAATTCG+AGG + Chr1:35286983-35287002 MsG0180002237.01.T01:intron 40.0%
!! AGAAATTGAAGGTGCTCATC+AGG + Chr1:35288469-35288488 MsG0180002237.01.T01:intron 40.0%
!! AGCAGTGATGATGCTCTTTT+TGG - Chr1:35290660-35290679 None:intergenic 40.0%
!! GCAGTGATGATGCTCTTTTT+GGG - Chr1:35290659-35290678 None:intergenic 40.0%
!! TCATCCCTATTGAAGTATCG+GGG + Chr1:35290980-35290999 MsG0180002237.01.T01:intron 40.0%
!! TCGGTGTTGCTTCAATTGTA+CGG + Chr1:35287567-35287586 MsG0180002237.01.T01:intron 40.0%
!!! AGTTTATTTTGGGGGTTGAG+GGG - Chr1:35289776-35289795 None:intergenic 40.0%
!!! TCTGTGTCCTGTCGATTTTT+TGG + Chr1:35290021-35290040 MsG0180002237.01.T01:intron 40.0%
AAAGAATCGGCGAATTGCAG+AGG - Chr1:35286507-35286526 None:intergenic 45.0%
AAATCTCATCGGTGCAAGAG+AGG + Chr1:35286288-35286307 MsG0180002237.01.T01:CDS 45.0%
AACCGTTCTCCAGAGTTATG+AGG - Chr1:35288672-35288691 None:intergenic 45.0%
AAGGATACTGAAACTTCGGC+CGG - Chr1:35292328-35292347 None:intergenic 45.0%
ACAAAACACGCATGCAGTCA+AGG - Chr1:35288329-35288348 None:intergenic 45.0%
ACCAACCACAATATCACCAC+AGG - Chr1:35293255-35293274 None:intergenic 45.0%
AGAGGAAGATAGATGGAAGC+AGG + Chr1:35291539-35291558 MsG0180002237.01.T01:intron 45.0%
AGCCGGTCCAAATAGAACAT+CGG + Chr1:35286928-35286947 MsG0180002237.01.T01:intron 45.0%
AGCGGATCATTACCATGACT+TGG - Chr1:35285245-35285264 None:intergenic 45.0%
AGGAACTAACCAGAACGAGA+AGG - Chr1:35286451-35286470 None:intergenic 45.0%
AGGATGGAGAGAGAAGCAAA+TGG + Chr1:35291323-35291342 MsG0180002237.01.T01:intron 45.0%
AGGATTGGAATCCAGACGAT+TGG + Chr1:35285216-35285235 MsG0180002237.01.T01:CDS 45.0%
ATGCAAGGGTCATCCATTCA+TGG + Chr1:35287819-35287838 MsG0180002237.01.T01:CDS 45.0%
ATGTGCTACGAGTCTATGAC+TGG - Chr1:35290569-35290588 None:intergenic 45.0%
CAATCTCAAATGCTCGAGTC+AGG - Chr1:35288106-35288125 None:intergenic 45.0%
CATTTGCCACCTCATAACTC+TGG + Chr1:35288059-35288078 MsG0180002237.01.T01:CDS 45.0%
CCAACTTCCTTCATCAGGAT+TGG + Chr1:35285201-35285220 MsG0180002237.01.T01:CDS 45.0%
CCAATCCTGATGAAGGAAGT+TGG - Chr1:35285204-35285223 None:intergenic 45.0%
CGCAGAATTTGCCAAGTCTA+AGG + Chr1:35293562-35293581 MsG0180002237.01.T01:CDS 45.0%
CTGGATTCCAATCCTGATGA+AGG - Chr1:35285211-35285230 None:intergenic 45.0%
CTTCCATTGTCTTTCCAGGA+TGG - Chr1:35287953-35287972 None:intergenic 45.0%
CTTTCGCCTTTGCATTCAAG+CGG - Chr1:35285263-35285282 None:intergenic 45.0%
GAACATCGGTCTTTACTAGC+TGG + Chr1:35286942-35286961 MsG0180002237.01.T01:intron 45.0%
GAAGCCCCGATACTTCAATA+GGG - Chr1:35290987-35291006 None:intergenic 45.0%
GACCGATGTTCTATTTGGAC+CGG - Chr1:35286933-35286952 None:intergenic 45.0%
GACGATTGGTATCCAAGTCA+TGG + Chr1:35285230-35285249 MsG0180002237.01.T01:CDS 45.0%
GACTCTTCCATTGTCTTTCC+AGG - Chr1:35287957-35287976 None:intergenic 45.0%
GAGGTGAAATGCTTCCAACA+TGG - Chr1:35288653-35288672 None:intergenic 45.0%
GATACTTCCCGATACGTATC+AGG - Chr1:35290850-35290869 None:intergenic 45.0%
GATGAGAGAGACGACGAAAA+AGG + Chr1:35286310-35286329 MsG0180002237.01.T01:CDS 45.0%
GATGAGATAAATGCTGCCTG+GGG + Chr1:35292263-35292282 MsG0180002237.01.T01:CDS 45.0%
GCCTTTCCCATTTCTCATGA+TGG + Chr1:35290183-35290202 MsG0180002237.01.T01:CDS 45.0%
GCTTCAAAGAATTGGAGGAG+CGG + Chr1:35289659-35289678 MsG0180002237.01.T01:CDS 45.0%
GCTTCAATTGTACGGTTCAC+TGG + Chr1:35287575-35287594 MsG0180002237.01.T01:intron 45.0%
GGATGAGATAAATGCTGCCT+GGG + Chr1:35292262-35292281 MsG0180002237.01.T01:CDS 45.0%
GGCACATTGTATGCAGAAGA+AGG - Chr1:35292298-35292317 None:intergenic 45.0%
GTATCCGAGTGAATTTGGTC+TGG - Chr1:35288776-35288795 None:intergenic 45.0%
GTCATCTGTTTGGAGGGTTA+AGG + Chr1:35287051-35287070 MsG0180002237.01.T01:intron 45.0%
GTCATGGCTCTTGAAAGGTT+TGG - Chr1:35288832-35288851 None:intergenic 45.0%
GTCCCACAAAACGCTTGTTT+GGG - Chr1:35285631-35285650 None:intergenic 45.0%
TAAGAAAATCAGCCTCGCTG+AGG - Chr1:35288446-35288465 None:intergenic 45.0%
TAGCCGCTTCAAAGAATTGG+AGG + Chr1:35289654-35289673 MsG0180002237.01.T01:CDS 45.0%
TATGCAGAAGAAGGCAAGCT+TGG - Chr1:35292289-35292308 None:intergenic 45.0%
TCCGTATCGTATCTCGTATC+CGG - Chr1:35290392-35290411 None:intergenic 45.0%
TGAAGCCCCGATACTTCAAT+AGG - Chr1:35290988-35291007 None:intergenic 45.0%
TGAAGCCTGTCTTAAACGCT+TGG + Chr1:35288401-35288420 MsG0180002237.01.T01:CDS 45.0%
TGATACGCCTGAAAATGCAC+GGG - Chr1:35285437-35285456 None:intergenic 45.0%
TGTCCTTCCCTCATTTGATG+TGG + Chr1:35292103-35292122 MsG0180002237.01.T01:intron 45.0%
TTAAGGCTCTGTTTGCGAGT+TGG + Chr1:35287101-35287120 MsG0180002237.01.T01:intron 45.0%
TTATGGCGTGAGAAGAGAGA+TGG + Chr1:35291616-35291635 MsG0180002237.01.T01:intron 45.0%
TTCAACGATCCTTCTCGTTC+TGG + Chr1:35286439-35286458 MsG0180002237.01.T01:CDS 45.0%
TTCCCATCCTGGAAAGACAA+TGG + Chr1:35287947-35287966 MsG0180002237.01.T01:CDS 45.0%
TTCTCCTCCTCGAATTCACA+GGG - Chr1:35286993-35287012 None:intergenic 45.0%
TTGGAAGTTGCACTCTCTCA+TGG + Chr1:35288861-35288880 MsG0180002237.01.T01:intron 45.0%
TTTCGCATATGCTGGTAGGT+AGG - Chr1:35291014-35291033 None:intergenic 45.0%
TTTCTCCTCCTCGAATTCAC+AGG - Chr1:35286994-35287013 None:intergenic 45.0%
! AGCGTTTGGGGTTTCAATCT+CGG - Chr1:35285916-35285935 None:intergenic 45.0%
! ATCCTGCTAAACCCCTTTTG+GGG - Chr1:35291104-35291123 None:intergenic 45.0%
! CACCTCATAACTCTGGAGAA+CGG + Chr1:35288667-35288686 MsG0180002237.01.T01:intron 45.0%
! CAGCTCATAAGTACTGTTGC+TGG - Chr1:35292961-35292980 None:intergenic 45.0%
! CTATCCTGCTAAACCCCTTT+TGG - Chr1:35291106-35291125 None:intergenic 45.0%
! GCTCCTCCAATTCTTTGAAG+CGG - Chr1:35289660-35289679 None:intergenic 45.0%
! GGAGGAGAGAGATGCAATTT+TGG + Chr1:35290098-35290117 MsG0180002237.01.T01:intron 45.0%
! TGACTTGGATACCAATCGTC+TGG - Chr1:35285230-35285249 None:intergenic 45.0%
! TTGGTCCAGTCAACTTGTTC+TGG + Chr1:35293486-35293505 MsG0180002237.01.T01:CDS 45.0%
! TTTTCCCTGTGAATTCGAGG+AGG + Chr1:35286986-35287005 MsG0180002237.01.T01:intron 45.0%
!! CAGCGAGGCTGATTTTCTTA+AGG + Chr1:35288446-35288465 MsG0180002237.01.T01:CDS 45.0%
!! GATACGTATCGGGAAGTATC+GGG + Chr1:35290850-35290869 MsG0180002237.01.T01:intron 45.0%
!! AAAAAATATAATTTAATCTT+TGG + Chr1:35290887-35290906 MsG0180002237.01.T01:intron 5.0%
!!! ATTATAAATTTTAAAAGTTT+AGG - Chr1:35286193-35286212 None:intergenic 5.0%
!!! ATTTAAAAAGTTTTATTTTT+TGG + Chr1:35285869-35285888 MsG0180002237.01.T01:intron 5.0%
!!! ATTTTTTTTTTTTTTTTTTG+AGG + Chr1:35292537-35292556 MsG0180002237.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG + Chr1:35292538-35292557 MsG0180002237.01.T01:intron 5.0%
AACCCCAAAAGGGGTTTAGC+AGG + Chr1:35291099-35291118 MsG0180002237.01.T01:intron 50.0%
AAGCAAAGACCTCAGGCTCA+AGG + Chr1:35287897-35287916 MsG0180002237.01.T01:CDS 50.0%
AAGTCGGAATCTGCGTCTGA+TGG + Chr1:35287993-35288012 MsG0180002237.01.T01:CDS 50.0%
AGCCTGTCTTAAACGCTTGG+AGG + Chr1:35288404-35288423 MsG0180002237.01.T01:CDS 50.0%
AGGCATAAAAAACCCGAGCC+AGG - Chr1:35293235-35293254 None:intergenic 50.0%
ATTCGAGGGTAGCTACCCAT+AGG - Chr1:35292930-35292949 None:intergenic 50.0%
CACACTGCTAGCACCATGAA+TGG - Chr1:35287835-35287854 None:intergenic 50.0%
CCCGGATACGAGATACGATA+CGG + Chr1:35290388-35290407 MsG0180002237.01.T01:intron 50.0%
CCGTATCGTATCTCGTATCC+GGG - Chr1:35290391-35290410 None:intergenic 50.0%
CCTGTCTTAAACGCTTGGAG+GGG + Chr1:35288406-35288425 MsG0180002237.01.T01:CDS 50.0%
CGACGAAAAAGGGTCGGAAT+CGG + Chr1:35286321-35286340 MsG0180002237.01.T01:CDS 50.0%
CGCAATCCACTTTGCATCGT+CGG + Chr1:35286391-35286410 MsG0180002237.01.T01:CDS 50.0%
CGCATGCAGTCAAGGCATAA+AGG - Chr1:35288321-35288340 None:intergenic 50.0%
CGTCCCACAAAACGCTTGTT+TGG - Chr1:35285632-35285651 None:intergenic 50.0%
CTGTCTTAAACGCTTGGAGG+GGG + Chr1:35288407-35288426 MsG0180002237.01.T01:CDS 50.0%
GAAACTTCGGCCGGAAATAC+TGG - Chr1:35292319-35292338 None:intergenic 50.0%
GAGAGACGACGAAAAAGGGT+CGG + Chr1:35286315-35286334 MsG0180002237.01.T01:CDS 50.0%
GCAAGGGTCATCTGTTTGGA+GGG + Chr1:35287045-35287064 MsG0180002237.01.T01:intron 50.0%
GCCTGTCTTAAACGCTTGGA+GGG + Chr1:35288405-35288424 MsG0180002237.01.T01:CDS 50.0%
GCCTGTGGTGATATTGTGGT+TGG + Chr1:35293251-35293270 MsG0180002237.01.T01:intron 50.0%
GCTGCCTATGTTGCTCAAGT+TGG - Chr1:35285412-35285431 None:intergenic 50.0%
GGGATGAGATAAATGCTGCC+TGG + Chr1:35292261-35292280 MsG0180002237.01.T01:CDS 50.0%
GTGTGCAAGGGTCATCTGTT+TGG + Chr1:35287041-35287060 MsG0180002237.01.T01:intron 50.0%
GTTGCCAAAGCAAAGACCTC+AGG + Chr1:35287890-35287909 MsG0180002237.01.T01:CDS 50.0%
TATCGGTGCAGGATACACAG+GGG + Chr1:35290947-35290966 MsG0180002237.01.T01:intron 50.0%
TGAGCCTGAGGTCTTTGCTT+TGG - Chr1:35287897-35287916 None:intergenic 50.0%
TGCAAGGGTCATCTGTTTGG+AGG + Chr1:35287044-35287063 MsG0180002237.01.T01:intron 50.0%
TGCTGGTGTCTGTGATTCGA+GGG - Chr1:35292944-35292963 None:intergenic 50.0%
TGGAAGCAGGTTGTGTGAGA+AGG + Chr1:35291552-35291571 MsG0180002237.01.T01:intron 50.0%
TTGCTGGTGTCTGTGATTCG+AGG - Chr1:35292945-35292964 None:intergenic 50.0%
! GTATCGGTGCAGGATACACA+GGG + Chr1:35290946-35290965 MsG0180002237.01.T01:intron 50.0%
! GTGCTCCAGAACAAGTTGAC+TGG - Chr1:35293494-35293513 None:intergenic 50.0%
! TGGCTTCGGTTTTGCAGGTT+TGG + Chr1:35293467-35293486 MsG0180002237.01.T01:intron 50.0%
! TGTTTGCGAGTTGGAGACGA+CGG + Chr1:35287110-35287129 MsG0180002237.01.T01:intron 50.0%
!! CGACGATGCAAAGTGGATTG+CGG - Chr1:35286393-35286412 None:intergenic 50.0%
!!! GCTCGGGTTTTTTATGCCTG+TGG + Chr1:35293236-35293255 MsG0180002237.01.T01:intron 50.0%
!!! TGCTAAACCCCTTTTGGGGT+TGG - Chr1:35291100-35291119 None:intergenic 50.0%
AAAAAACCCGAGCCAGGCCA+AGG - Chr1:35293229-35293248 None:intergenic 55.0%
AAAAACCCGAGCCAGGCCAA+GGG - Chr1:35293228-35293247 None:intergenic 55.0%
AATCTGCGTCTGATGGAGGC+GGG + Chr1:35288000-35288019 MsG0180002237.01.T01:CDS 55.0%
ACGACGGAAAGGGATGGCTT+TGG + Chr1:35287126-35287145 MsG0180002237.01.T01:intron 55.0%
AGCCTCGCTGAGGACATCTT+TGG - Chr1:35288436-35288455 None:intergenic 55.0%
AGGCATACATAACCCGAGCC+AGG - Chr1:35293327-35293346 None:intergenic 55.0%
AGGCTCAAGGAGTTCCTCCT+CGG + Chr1:35287910-35287929 MsG0180002237.01.T01:CDS 55.0%
AGGGGCCAACTTCCTTCATC+AGG + Chr1:35285196-35285215 MsG0180002237.01.T01:CDS 55.0%
AGGGTCGGAATCGGAGCTTA+CGG + Chr1:35286330-35286349 MsG0180002237.01.T01:CDS 55.0%
ATAGTGCGCTATAGCGGCGT+AGG - Chr1:35291804-35291823 None:intergenic 55.0%
ATTGGGGCAGGTATCAGTGC+AGG + Chr1:35290806-35290825 MsG0180002237.01.T01:intron 55.0%
CAAACCCAGCGGGGAACATT+CGG - Chr1:35286361-35286380 None:intergenic 55.0%
CATAACCCGAGCCAGGGTAA+AGG - Chr1:35293320-35293339 None:intergenic 55.0%
CGACGGAAAGGGATGGCTTT+GGG + Chr1:35287127-35287146 MsG0180002237.01.T01:intron 55.0%
CGGGGGAAACTCATTGTCTC+CGG + Chr1:35288019-35288038 MsG0180002237.01.T01:CDS 55.0%
CGTAACGGCCAACCCCAAAA+GGG + Chr1:35291089-35291108 MsG0180002237.01.T01:intron 55.0%
CGTGGTGATACTTCCCATCC+TGG + Chr1:35287936-35287955 MsG0180002237.01.T01:CDS 55.0%
GAATCTGCGTCTGATGGAGG+CGG + Chr1:35287999-35288018 MsG0180002237.01.T01:CDS 55.0%
GAGCTACCTTCTGTGAAGCC+CGG + Chr1:35290370-35290389 MsG0180002237.01.T01:intron 55.0%
GATTGCCACTACACAGACGC+AGG + Chr1:35288121-35288140 MsG0180002237.01.T01:CDS 55.0%
GCTCGGGTTATGTATGCCTG+TGG + Chr1:35293328-35293347 MsG0180002237.01.T01:intron 55.0%
GGCATACATAACCCGAGCCA+GGG - Chr1:35293326-35293345 None:intergenic 55.0%
GGGAAACTCATTGTCTCCGG+GGG + Chr1:35288022-35288041 MsG0180002237.01.T01:CDS 55.0%
GGGGAAACTCATTGTCTCCG+GGG + Chr1:35288021-35288040 MsG0180002237.01.T01:CDS 55.0%
GGGGGAAACTCATTGTCTCC+GGG + Chr1:35288020-35288039 MsG0180002237.01.T01:CDS 55.0%
GTAACGGCCAACCCCAAAAG+GGG + Chr1:35291090-35291109 MsG0180002237.01.T01:intron 55.0%
TAGTGCGCTATAGCGGCGTA+GGG - Chr1:35291803-35291822 None:intergenic 55.0%
TCCTGGATTGCAGCGCGTAA+CGG + Chr1:35291074-35291093 MsG0180002237.01.T01:intron 55.0%
TCGGAATCTGCGTCTGATGG+AGG + Chr1:35287996-35288015 MsG0180002237.01.T01:CDS 55.0%
TCGTATCCGGGCTTCACAGA+AGG - Chr1:35290379-35290398 None:intergenic 55.0%
TCTTAAACGCTTGGAGGGGG+AGG + Chr1:35288410-35288429 MsG0180002237.01.T01:CDS 55.0%
TGACCACCATGATCAACCCC+CGG - Chr1:35288041-35288060 None:intergenic 55.0%
TTAGGGCTGTGCCTTTACCC+TGG + Chr1:35293306-35293325 MsG0180002237.01.T01:intron 55.0%
TTGGAGACGACGGAAAGGGA+TGG + Chr1:35287120-35287139 MsG0180002237.01.T01:intron 55.0%
TTGGAGGGTGACACACCCTT+TGG + Chr1:35289246-35289265 MsG0180002237.01.T01:intron 55.0%
! ACTGCACCGATACGCCGATA+TGG + Chr1:35290418-35290437 MsG0180002237.01.T01:intron 55.0%
! CAGTTCTGACAAACCCAGCG+GGG - Chr1:35286370-35286389 None:intergenic 55.0%
! CCCCTCCAAGCGTTTAAGAC+AGG - Chr1:35288409-35288428 None:intergenic 55.0%
! CGAGTTGGAGACGACGGAAA+GGG + Chr1:35287116-35287135 MsG0180002237.01.T01:intron 55.0%
! GACGGAAAGGGATGGCTTTG+GGG + Chr1:35287128-35287147 MsG0180002237.01.T01:intron 55.0%
! GCAGCTACCCGTGCATTTTC+AGG + Chr1:35285427-35285446 MsG0180002237.01.T01:intron 55.0%
! GCAGTTCTGACAAACCCAGC+GGG - Chr1:35286371-35286390 None:intergenic 55.0%
! GGCAGTTCTGACAAACCCAG+CGG - Chr1:35286372-35286391 None:intergenic 55.0%
! TTGTCTCCGGGGGTTGATCA+TGG + Chr1:35288032-35288051 MsG0180002237.01.T01:CDS 55.0%
!! ATTTTGGGGGTTGAGGGGTG+AGG - Chr1:35289771-35289790 None:intergenic 55.0%
!! GAAAGGGATGGCTTTGGGGA+GGG + Chr1:35287132-35287151 MsG0180002237.01.T01:intron 55.0%
!! GGATGGGAAGTATCACCACG+AGG - Chr1:35287936-35287955 None:intergenic 55.0%
!! GGGAAGTATCGGGCAGGTAT+CGG + Chr1:35290930-35290949 MsG0180002237.01.T01:intron 55.0%
!! GGTATCGGTGCAGGATACAC+AGG + Chr1:35290945-35290964 MsG0180002237.01.T01:intron 55.0%
AAGAAGGCAAGCTTGGCCCC+AGG - Chr1:35292282-35292301 None:intergenic 60.0%
ATCTGCGTCTGATGGAGGCG+GGG + Chr1:35288001-35288020 MsG0180002237.01.T01:CDS 60.0%
CTGTGCCTTTACCCTGGCTC+GGG + Chr1:35293312-35293331 MsG0180002237.01.T01:intron 60.0%
GAGGGAAGGGAGGAGTAGAG+GGG + Chr1:35287150-35287169 MsG0180002237.01.T01:intron 60.0%
GCGTAACGGCCAACCCCAAA+AGG + Chr1:35291088-35291107 MsG0180002237.01.T01:intron 60.0%
GCTATAGCGGCGTAGGGTAG+CGG - Chr1:35291797-35291816 None:intergenic 60.0%
GCTGTGCCTTTACCCTGGCT+CGG + Chr1:35293311-35293330 MsG0180002237.01.T01:intron 60.0%
GGAGGAACTCCTTGAGCCTG+AGG - Chr1:35287909-35287928 None:intergenic 60.0%
GGAGGGAAGGGAGGAGTAGA+GGG + Chr1:35287149-35287168 MsG0180002237.01.T01:intron 60.0%
GGATCCGAATGTTCCCCGCT+GGG + Chr1:35286354-35286373 MsG0180002237.01.T01:CDS 60.0%
GGCCAAAGATGTCCTCAGCG+AGG + Chr1:35288431-35288450 MsG0180002237.01.T01:CDS 60.0%
GTCGGAATCGGAGCTTACGG+TGG + Chr1:35286333-35286352 MsG0180002237.01.T01:CDS 60.0%
TCGACGCCGACGATGCAAAG+TGG - Chr1:35286400-35286419 None:intergenic 60.0%
TGGATCCGAATGTTCCCCGC+TGG + Chr1:35286353-35286372 MsG0180002237.01.T01:CDS 60.0%
TTAGGGTTGTGCCCTTGGCC+TGG + Chr1:35293214-35293233 MsG0180002237.01.T01:intron 60.0%
! GAAGTATCACCACGAGGCCG+AGG - Chr1:35287930-35287949 None:intergenic 60.0%
! GCGAGTTGGAGACGACGGAA+AGG + Chr1:35287115-35287134 MsG0180002237.01.T01:intron 60.0%
! TCTCCGGGGGTTGATCATGG+TGG + Chr1:35288035-35288054 MsG0180002237.01.T01:CDS 60.0%
!! CGTATCGGGAAGTATCGGGC+AGG + Chr1:35290924-35290943 MsG0180002237.01.T01:intron 60.0%
!! GGAAAGGGATGGCTTTGGGG+AGG + Chr1:35287131-35287150 MsG0180002237.01.T01:intron 60.0%
!! GGATGGCTTTGGGGAGGGAA+GGG + Chr1:35287137-35287156 MsG0180002237.01.T01:intron 60.0%
!! TATCGGGCAGGTATCGGTGC+AGG + Chr1:35290936-35290955 MsG0180002237.01.T01:intron 60.0%
GCCGTTACGCGCTGCAATCC+AGG - Chr1:35291078-35291097 None:intergenic 65.0%
GCGCACCTGCGTCTGTGTAG+TGG - Chr1:35288129-35288148 None:intergenic 65.0%
GGGAGGGAAGGGAGGAGTAG+AGG + Chr1:35287148-35287167 MsG0180002237.01.T01:intron 65.0%
GTATCACCACGAGGCCGAGG+AGG - Chr1:35287927-35287946 None:intergenic 65.0%
GTTGTGCCCTTGGCCTGGCT+CGG + Chr1:35293219-35293238 MsG0180002237.01.T01:intron 65.0%
TCTGCGTCTGATGGAGGCGG+GGG + Chr1:35288002-35288021 MsG0180002237.01.T01:CDS 65.0%
TTGTGCCCTTGGCCTGGCTC+GGG + Chr1:35293220-35293239 MsG0180002237.01.T01:intron 65.0%
!! GGGATGGCTTTGGGGAGGGA+AGG + Chr1:35287136-35287155 MsG0180002237.01.T01:intron 65.0%
!! TGGCTTTGGGGAGGGAAGGG+AGG + Chr1:35287140-35287159 MsG0180002237.01.T01:intron 65.0%
GGAGTTCCTCCTCGGCCTCG+TGG + Chr1:35287918-35287937 MsG0180002237.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 35285149 35293637 35285149 ID=MsG0180002237.01;Name=MsG0180002237.01
Chr1 mRNA 35285149 35293637 35285149 ID=MsG0180002237.01.T01;Parent=MsG0180002237.01;Name=MsG0180002237.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0.75|0.55|0.88|1|1|9|0|456
Chr1 exon 35285149 35285281 35285149 ID=MsG0180002237.01.T01:exon:2141;Parent=MsG0180002237.01.T01
Chr1 exon 35286272 35286460 35286272 ID=MsG0180002237.01.T01:exon:2142;Parent=MsG0180002237.01.T01
Chr1 exon 35287817 35288142 35287817 ID=MsG0180002237.01.T01:exon:2143;Parent=MsG0180002237.01.T01
Chr1 exon 35288309 35288479 35288309 ID=MsG0180002237.01.T01:exon:2144;Parent=MsG0180002237.01.T01
Chr1 exon 35289556 35289680 35289556 ID=MsG0180002237.01.T01:exon:2145;Parent=MsG0180002237.01.T01
Chr1 exon 35289873 35289921 35289873 ID=MsG0180002237.01.T01:exon:2146;Parent=MsG0180002237.01.T01
Chr1 exon 35290099 35290257 35290099 ID=MsG0180002237.01.T01:exon:2147;Parent=MsG0180002237.01.T01
Chr1 exon 35292254 35292318 35292254 ID=MsG0180002237.01.T01:exon:2148;Parent=MsG0180002237.01.T01
Chr1 exon 35293484 35293637 35293484 ID=MsG0180002237.01.T01:exon:2149;Parent=MsG0180002237.01.T01
Chr1 CDS 35285149 35285281 35285149 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35286272 35286460 35286272 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35287817 35288142 35287817 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35288309 35288479 35288309 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35289556 35289680 35289556 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35289873 35289921 35289873 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35290099 35290257 35290099 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35292254 35292318 35292254 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Chr1 CDS 35293484 35293637 35293484 ID=MsG0180002237.01.T01:cds;Parent=MsG0180002237.01.T01
Gene Sequence

>MsG0180002237.01.T01

ATGGGTGTCAGAAGACAAGTCATCCCTCCCTTCTACAAAAATGCAAGAGGGGCCAACTTCCTTCATCAGGATTGGAATCCAGACGATTGGTATCCAAGTCATGGTAATGATCCGCTTGAATGCAAAGGCGAAACCTTAAATTGCAATGAAAATCTCATCGGTGCAAGAGAGGATGAGAGAGACGACGAAAAAGGGTCGGAATCGGAGCTTACGGTGGATCCGAATGTTCCCCGCTGGGTTTGTCAGAACTGCCGCAATCCACTTTGCATCGTCGGCGTCGATTCTTACGCCGACAAGTACTTCAACGATCCTTCTCGTTCTGGGATGCAAGGGTCATCCATTCATGGTGCTAGCAGTGTGATGAGCACTACTAAAATGGACAACTCATATGTTGTGTTGCCAAAGCAAAGACCTCAGGCTCAAGGAGTTCCTCCTCGGCCTCGTGGTGATACTTCCCATCCTGGAAAGACAATGGAAGAGTCTTTTGTGGTAGTGTACAAGTCGGAATCTGCGTCTGATGGAGGCGGGGGAAACTCATTGTCTCCGGGGGTTGATCATGGTGGTCATTTGCCACCTCATAACTCTGGATTCAATTCAACTATTACTGTCCTGACTCGAGCATTTGAGATTGCCACTACACAGACGCAGGTTGAACAGCCTTTATGCCTTGACTGCATGCGTGTTTTGTCTGACAAACTTGATAAAGAGGTCGAAGATGTAAATAGGGACATTGAAGCATATGAAGCCTGTCTTAAACGCTTGGAGGGGGAGGCCAAAGATGTCCTCAGCGAGGCTGATTTTCTTAAGGAGAAATTGAAGATTGAAGAAGAAGAAAGAAGACTAGAAGCGGCAATTGAAGAAACAGAGAGACAGAATACTGAAGTAAATGCTGAACTGAAGGAACTTGAGTTAAAATCTAGCCGCTTCAAAGAATTGGAGGAGCGGTATTGGCATGAGTTCAATAATTTTCAGTTTCAATTGATTTCACATCAGGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTAGAATTGTTGAAGAGAACAAATGTGCTCAATGATGCCTTTCCCATTTCTCATGATGGAGAGTTTGGAACAATTAACAATTTTCGGCTTGGAAGACTCCCCAAAATTCCAGTAGAATGGGATGAGATAAATGCTGCCTGGGGCCAAGCTTGCCTTCTTCTGCATACAATGTGCCAGTTTGGTCCAGTCAACTTGTTCTGGAGCACTCGCTATGACAAAGCAATGACATTGTTTTTAGCATGCCTCAAGGATTTCGCAGAATTTGCCAAGTCTAAGGATCAAGAGAACAACATACCACCAGAGAAATGTTTCAAGCTACCTTATAAGTAA
Protein sequence

>MsG0180002237.01.T01

MGVRRQVIPPFYKNARGANFLHQDWNPDDWYPSHGNDPLECKGETLNCNENLIGAREDERDDEKGSESELTVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQGSSIHGASSVMSTTKMDNSYVVLPKQRPQAQGVPPRPRGDTSHPGKTMEESFVVVYKSESASDGGGGNSLSPGVDHGGHLPPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRVLSDKLDKEVEDVNRDIEAYEACLKRLEGEAKDVLSEADFLKEKLKIEEEERRLEAAIEETERQNTEVNAELKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQFGPVNLFWSTRYDKAMTLFLACLKDFAEFAKSKDQENNIPPEKCFKLPYK*