Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002270.01.T01 | XP_003623199.1 | 95.968 | 124 | 5 | 0 | 1 | 124 | 1 | 124 | 1.40E-80 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002270.01.T01 | P32110 | 76.415 | 106 | 25 | 0 | 19 | 124 | 1 | 106 | 8.99E-54 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002270.01.T01 | G7L6H3 | 95.968 | 124 | 5 | 0 | 1 | 124 | 1 | 124 | 6.68e-81 | 249 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002270.01 | MsG0180004099.01 | 0.819701 | 1.011242e-52 | 7.839341e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002270.01.T01 | MTR_7g065630 | 95.968 | 124 | 5 | 0 | 1 | 124 | 1 | 124 | 1.69e-84 | 249 |
| MsG0180002270.01.T01 | MTR_7g065680 | 84.545 | 110 | 16 | 1 | 19 | 127 | 1 | 110 | 2.61e-62 | 192 |
| MsG0180002270.01.T01 | MTR_7g065700 | 84.906 | 106 | 16 | 0 | 19 | 124 | 1 | 106 | 4.13e-61 | 189 |
| MsG0180002270.01.T01 | MTR_7g065710 | 84.848 | 99 | 15 | 0 | 26 | 124 | 5 | 103 | 2.84e-58 | 182 |
| MsG0180002270.01.T01 | MTR_7g065230 | 77.358 | 106 | 24 | 0 | 19 | 124 | 1 | 106 | 7.76e-56 | 175 |
| MsG0180002270.01.T01 | MTR_7g065720 | 74.312 | 109 | 28 | 0 | 19 | 127 | 1 | 109 | 1.85e-55 | 174 |
| MsG0180002270.01.T01 | MTR_7g065590 | 72.727 | 110 | 29 | 1 | 19 | 127 | 1 | 110 | 9.37e-55 | 172 |
| MsG0180002270.01.T01 | MTR_7g065265 | 74.528 | 106 | 27 | 0 | 19 | 124 | 1 | 106 | 1.10e-53 | 170 |
| MsG0180002270.01.T01 | MTR_7g065640 | 72.477 | 109 | 30 | 0 | 19 | 127 | 1 | 109 | 3.30e-53 | 168 |
| MsG0180002270.01.T01 | MTR_7g065600 | 72.642 | 106 | 29 | 0 | 19 | 124 | 1 | 106 | 1.65e-52 | 167 |
| MsG0180002270.01.T01 | MTR_7g065660 | 71.560 | 109 | 31 | 0 | 19 | 127 | 1 | 109 | 2.45e-52 | 167 |
| MsG0180002270.01.T01 | MTR_7g065290 | 71.698 | 106 | 30 | 0 | 19 | 124 | 1 | 106 | 9.79e-52 | 165 |
| MsG0180002270.01.T01 | MTR_7g065270 | 71.698 | 106 | 30 | 0 | 19 | 124 | 1 | 106 | 2.94e-51 | 164 |
| MsG0180002270.01.T01 | MTR_7g065260 | 68.807 | 109 | 34 | 0 | 19 | 127 | 8 | 116 | 6.96e-51 | 163 |
| MsG0180002270.01.T01 | MTR_7g065750 | 69.811 | 106 | 32 | 0 | 19 | 124 | 1 | 106 | 3.63e-50 | 161 |
| MsG0180002270.01.T01 | MTR_7g065740 | 66.972 | 109 | 36 | 0 | 19 | 127 | 1 | 109 | 9.04e-49 | 157 |
| MsG0180002270.01.T01 | MTR_4g019780 | 65.421 | 107 | 37 | 0 | 18 | 124 | 1 | 107 | 4.01e-48 | 155 |
| MsG0180002270.01.T01 | MTR_4g019790 | 66.981 | 106 | 35 | 0 | 19 | 124 | 1 | 106 | 5.37e-46 | 150 |
| MsG0180002270.01.T01 | MTR_3g099757 | 60.526 | 114 | 41 | 1 | 22 | 131 | 2 | 115 | 3.88e-44 | 145 |
| MsG0180002270.01.T01 | MTR_6g080440 | 57.798 | 109 | 45 | 1 | 25 | 132 | 3 | 111 | 5.54e-37 | 127 |
| MsG0180002270.01.T01 | MTR_8g087425 | 58.416 | 101 | 42 | 0 | 23 | 123 | 3 | 103 | 3.80e-36 | 125 |
| MsG0180002270.01.T01 | MTR_1g090070 | 56.863 | 102 | 44 | 0 | 25 | 126 | 9 | 110 | 4.02e-35 | 122 |
| MsG0180002270.01.T01 | MTR_1g090150 | 54.455 | 101 | 46 | 0 | 24 | 124 | 2 | 102 | 2.22e-34 | 120 |
| MsG0180002270.01.T01 | MTR_5g040430 | 50.909 | 110 | 53 | 1 | 19 | 127 | 1 | 110 | 2.55e-34 | 120 |
| MsG0180002270.01.T01 | MTR_0186s0030 | 54.902 | 102 | 45 | 1 | 23 | 123 | 2 | 103 | 5.45e-34 | 117 |
| MsG0180002270.01.T01 | MTR_4g059730 | 52.336 | 107 | 51 | 0 | 23 | 129 | 2 | 108 | 7.05e-34 | 119 |
| MsG0180002270.01.T01 | MTR_4g124130 | 58.252 | 103 | 41 | 2 | 24 | 124 | 3 | 105 | 1.83e-33 | 118 |
| MsG0180002270.01.T01 | MTR_8g056940 | 55.882 | 102 | 44 | 1 | 23 | 123 | 2 | 103 | 2.01e-33 | 118 |
| MsG0180002270.01.T01 | MTR_8g087410 | 56.190 | 105 | 46 | 0 | 24 | 128 | 5 | 109 | 2.03e-33 | 118 |
| MsG0180002270.01.T01 | MTR_1g115195 | 57.426 | 101 | 43 | 0 | 25 | 125 | 3 | 103 | 3.39e-33 | 117 |
| MsG0180002270.01.T01 | MTR_1g090060 | 52.381 | 105 | 50 | 0 | 25 | 129 | 3 | 107 | 2.60e-32 | 115 |
| MsG0180002270.01.T01 | MTR_2g070150 | 52.941 | 102 | 47 | 1 | 23 | 123 | 2 | 103 | 7.95e-32 | 114 |
| MsG0180002270.01.T01 | MTR_2g070130 | 50.000 | 110 | 54 | 1 | 23 | 131 | 2 | 111 | 8.58e-32 | 114 |
| MsG0180002270.01.T01 | MTR_1g090100 | 54.545 | 99 | 45 | 0 | 26 | 124 | 3 | 101 | 1.70e-31 | 113 |
| MsG0180002270.01.T01 | MTR_2g070210 | 54.808 | 104 | 44 | 2 | 23 | 123 | 2 | 105 | 3.64e-31 | 112 |
| MsG0180002270.01.T01 | MTR_2g070070 | 50.000 | 102 | 50 | 1 | 23 | 123 | 2 | 103 | 5.44e-31 | 112 |
| MsG0180002270.01.T01 | MTR_8g061950 | 46.763 | 139 | 69 | 3 | 25 | 160 | 5 | 141 | 5.58e-31 | 112 |
| MsG0180002270.01.T01 | MTR_2g070180 | 50.980 | 102 | 49 | 1 | 23 | 123 | 2 | 103 | 1.18e-30 | 111 |
| MsG0180002270.01.T01 | MTR_2g070200 | 51.961 | 102 | 48 | 1 | 23 | 123 | 2 | 103 | 2.92e-30 | 110 |
| MsG0180002270.01.T01 | MTR_5g037380 | 48.113 | 106 | 52 | 1 | 22 | 124 | 2 | 107 | 5.95e-30 | 109 |
| MsG0180002270.01.T01 | MTR_3g467420 | 52.525 | 99 | 46 | 1 | 26 | 123 | 10 | 108 | 2.18e-29 | 108 |
| MsG0180002270.01.T01 | MTR_2g070120 | 50.980 | 102 | 49 | 1 | 23 | 123 | 2 | 103 | 4.66e-29 | 107 |
| MsG0180002270.01.T01 | MTR_1g090090 | 52.525 | 99 | 47 | 0 | 25 | 123 | 3 | 101 | 4.72e-29 | 107 |
| MsG0180002270.01.T01 | MTR_2g070140 | 52.874 | 87 | 40 | 1 | 38 | 123 | 1 | 87 | 4.63e-28 | 103 |
| MsG0180002270.01.T01 | MTR_3g467430 | 49.515 | 103 | 51 | 1 | 22 | 123 | 6 | 108 | 6.13e-28 | 104 |
| MsG0180002270.01.T01 | MTR_5g076900 | 50.000 | 104 | 51 | 1 | 21 | 123 | 2 | 105 | 2.70e-27 | 102 |
| MsG0180002270.01.T01 | MTR_2g070060 | 47.059 | 102 | 53 | 1 | 23 | 123 | 2 | 103 | 4.30e-27 | 102 |
| MsG0180002270.01.T01 | MTR_2g070110 | 48.039 | 102 | 52 | 1 | 23 | 123 | 2 | 103 | 7.64e-27 | 101 |
| MsG0180002270.01.T01 | MTR_2g072120 | 42.857 | 56 | 31 | 1 | 69 | 123 | 2 | 57 | 3.41e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002270.01.T01 | AT2G29420 | 61.538 | 104 | 40 | 0 | 21 | 124 | 5 | 108 | 1.32e-44 | 147 |
| MsG0180002270.01.T01 | AT2G29490 | 55.372 | 121 | 53 | 1 | 19 | 139 | 1 | 120 | 9.53e-41 | 137 |
| MsG0180002270.01.T01 | AT2G29450 | 61.468 | 109 | 42 | 0 | 21 | 129 | 2 | 110 | 3.24e-39 | 133 |
| MsG0180002270.01.T01 | AT2G29480 | 55.372 | 121 | 53 | 1 | 19 | 139 | 1 | 120 | 1.10e-38 | 132 |
| MsG0180002270.01.T01 | AT2G29460 | 56.604 | 106 | 46 | 0 | 19 | 124 | 1 | 106 | 1.39e-37 | 129 |
| MsG0180002270.01.T01 | AT3G09270 | 58.333 | 108 | 43 | 2 | 24 | 129 | 5 | 112 | 1.84e-37 | 129 |
| MsG0180002270.01.T01 | AT2G29440 | 53.279 | 122 | 56 | 1 | 24 | 145 | 5 | 125 | 3.42e-37 | 128 |
| MsG0180002270.01.T01 | AT2G29470 | 52.459 | 122 | 56 | 2 | 19 | 139 | 1 | 121 | 3.61e-37 | 128 |
| MsG0180002270.01.T01 | AT1G10370 | 42.484 | 153 | 85 | 2 | 22 | 171 | 2 | 154 | 6.85e-35 | 122 |
| MsG0180002270.01.T01 | AT5G62480 | 56.566 | 99 | 42 | 1 | 25 | 122 | 8 | 106 | 4.00e-34 | 120 |
| MsG0180002270.01.T01 | AT1G59670 | 56.075 | 107 | 44 | 2 | 24 | 127 | 5 | 111 | 8.04e-34 | 119 |
| MsG0180002270.01.T01 | AT1G59700 | 58.654 | 104 | 40 | 2 | 24 | 124 | 5 | 108 | 1.01e-33 | 119 |
| MsG0180002270.01.T01 | AT1G78340 | 53.922 | 102 | 46 | 1 | 23 | 123 | 2 | 103 | 1.09e-33 | 119 |
| MsG0180002270.01.T01 | AT1G10360 | 41.830 | 153 | 86 | 2 | 22 | 171 | 2 | 154 | 1.98e-32 | 115 |
| MsG0180002270.01.T01 | AT1G69930 | 49.123 | 114 | 56 | 2 | 20 | 131 | 7 | 120 | 6.24e-32 | 115 |
| MsG0180002270.01.T01 | AT1G17170 | 52.941 | 102 | 47 | 1 | 23 | 123 | 2 | 103 | 1.04e-31 | 114 |
| MsG0180002270.01.T01 | AT1G74590 | 50.926 | 108 | 52 | 1 | 25 | 131 | 7 | 114 | 1.25e-31 | 114 |
| MsG0180002270.01.T01 | AT1G78380 | 53.922 | 102 | 46 | 1 | 23 | 123 | 2 | 103 | 1.66e-31 | 113 |
| MsG0180002270.01.T01 | AT1G78320 | 52.475 | 101 | 47 | 1 | 24 | 123 | 3 | 103 | 5.25e-31 | 112 |
| MsG0180002270.01.T01 | AT1G17180 | 51.961 | 102 | 48 | 1 | 23 | 123 | 2 | 103 | 7.58e-31 | 111 |
| MsG0180002270.01.T01 | AT1G27130 | 48.673 | 113 | 54 | 3 | 21 | 129 | 2 | 114 | 2.30e-29 | 108 |
| MsG0180002270.01.T01 | AT1G78370 | 48.000 | 100 | 51 | 1 | 28 | 126 | 7 | 106 | 4.71e-29 | 107 |
| MsG0180002270.01.T01 | AT1G27140 | 48.649 | 111 | 52 | 3 | 21 | 126 | 2 | 112 | 1.73e-28 | 106 |
| MsG0180002270.01.T01 | AT1G53680 | 52.174 | 92 | 43 | 1 | 33 | 123 | 15 | 106 | 2.51e-28 | 105 |
| MsG0180002270.01.T01 | AT1G78360 | 51.456 | 103 | 48 | 2 | 23 | 123 | 2 | 104 | 4.12e-28 | 104 |
| MsG0180002270.01.T01 | AT1G17190 | 47.115 | 104 | 54 | 1 | 24 | 126 | 4 | 107 | 2.35e-27 | 102 |
| MsG0180002270.01.T01 | AT1G69920 | 47.170 | 106 | 53 | 2 | 21 | 123 | 30 | 135 | 7.52e-27 | 102 |
| MsG0180002270.01.T01 | AT3G43800 | 48.113 | 106 | 51 | 2 | 22 | 123 | 2 | 107 | 2.09e-26 | 100 |
| MsG0180002270.01.T01 | AT5G62480 | 38.776 | 98 | 35 | 1 | 25 | 122 | 8 | 80 | 1.07e-16 | 74.7 |
| MsG0180002270.01.T01 | AT5G62480 | 38.776 | 98 | 34 | 1 | 25 | 122 | 8 | 79 | 1.56e-16 | 74.3 |
| MsG0180002270.01.T01 | AT1G78320 | 38.000 | 100 | 36 | 1 | 24 | 123 | 3 | 76 | 3.74e-15 | 70.1 |
Find 34 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCTTTGGCTCGTTTC+TGG | 0.167309 | 1:+36037770 | MsG0180002270.01.T01:CDS |
| GTTCCTGTCTTTGTTCATAA+TGG | 0.256856 | 1:+36037661 | MsG0180002270.01.T01:CDS |
| TCAAATACAATCCAGTTTAC+AGG | 0.271484 | 1:+36037635 | MsG0180002270.01.T01:CDS |
| AAGAGCTTTGGCTCGTTTCT+GGG | 0.368856 | 1:+36037771 | MsG0180002270.01.T01:CDS |
| ACAGGAACCATCCTGTAAAC+TGG | 0.379945 | 1:-36037646 | None:intergenic |
| TAAGGATCATTCGGTAAGAT+TGG | 0.380645 | 1:-36037745 | None:intergenic |
| TTTCGCTACGGGAAGGTGTT+AGG | 0.390074 | 1:+36037939 | MsG0180002270.01.T01:CDS |
| TTGCAACACTCTCTTGACTT+TGG | 0.438225 | 1:-36037458 | None:intergenic |
| TACGTTTGAACCTTTCAAAC+CGG | 0.442960 | 1:+36037846 | MsG0180002270.01.T01:CDS |
| CGAGCCAAAGCTCTTTGATA+AGG | 0.454417 | 1:-36037763 | None:intergenic |
| TTTGAACTCTAATGACAAAC+GGG | 0.454463 | 1:-36037540 | None:intergenic |
| GCTCTTTGATAAGGATCATT+CGG | 0.455855 | 1:-36037754 | None:intergenic |
| TGATCCTTATCAAAGAGCTT+TGG | 0.457027 | 1:+36037759 | MsG0180002270.01.T01:CDS |
| AACCCTTGAGAATCGAGGTC+CGG | 0.462024 | 1:+36037909 | MsG0180002270.01.T01:CDS |
| ATTTGAACTCTAATGACAAA+CGG | 0.463318 | 1:-36037541 | None:intergenic |
| TCAAATTGCGCTGGAATTGA+AGG | 0.463855 | 1:+36037558 | MsG0180002270.01.T01:CDS |
| AAGAGAGTGTTGCAAGGCTA+TGG | 0.471351 | 1:+36037466 | MsG0180002270.01.T01:CDS |
| ACCCTTGAGAATCGAGGTCC+GGG | 0.505758 | 1:+36037910 | MsG0180002270.01.T01:CDS |
| TAAGATATCACCGGTTTGAA+AGG | 0.506314 | 1:-36037856 | None:intergenic |
| CATTAGAGTTCAAATTGCGC+TGG | 0.507403 | 1:+36037549 | MsG0180002270.01.T01:CDS |
| TTTCCATTATGAACAAAGAC+AGG | 0.513163 | 1:-36037664 | None:intergenic |
| TTGAGTACATCGATGAGACT+TGG | 0.528066 | 1:+36037713 | MsG0180002270.01.T01:CDS |
| CTCCCGGACCTCGATTCTCA+AGG | 0.537806 | 1:-36037912 | None:intergenic |
| AAAACAGTCATCAATGAACT+TGG | 0.540012 | 1:-36037794 | None:intergenic |
| CCCGTAGCGAAAACAACTCC+CGG | 0.563638 | 1:-36037928 | None:intergenic |
| GATTGCTGCATCTGCAGAAG+AGG | 0.571501 | 1:+36037492 | MsG0180002270.01.T01:CDS |
| CAAATTGCGCTGGAATTGAA+GGG | 0.575623 | 1:+36037559 | MsG0180002270.01.T01:CDS |
| ATCACACGAGACTCCGAGAT+GGG | 0.589789 | 1:-36037688 | None:intergenic |
| TCCCGGACCTCGATTCTCAA+GGG | 0.595882 | 1:-36037911 | None:intergenic |
| AATCACACGAGACTCCGAGA+TGG | 0.605388 | 1:-36037689 | None:intergenic |
| TCATAATGGAAATCCCATCT+CGG | 0.646463 | 1:+36037675 | MsG0180002270.01.T01:CDS |
| AGCAAAACCCTTGAGAATCG+AGG | 0.652812 | 1:+36037904 | MsG0180002270.01.T01:CDS |
| ATACAATCCAGTTTACAGGA+TGG | 0.668642 | 1:+36037639 | MsG0180002270.01.T01:CDS |
| AAAGTCAAGAGAGTGTTGCA+AGG | 0.688685 | 1:+36037460 | MsG0180002270.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTCCGAAGAAAAATT+GGG | + | Chr1:36037592-36037611 | MsG0180002270.01.T01:CDS | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | Chr1:36037868-36037887 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | Chr1:36037868-36037887 | MsG0180002270.01.T01:CDS | 20.0% |
| ! | ATTTGAACTCTAATGACAAA+CGG | - | Chr1:36037544-36037563 | None:intergenic | 25.0% |
| ! | CAAATATTCCGAAGAAAAAT+TGG | + | Chr1:36037591-36037610 | MsG0180002270.01.T01:CDS | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | Chr1:36037873-36037892 | MsG0180002270.01.T01:CDS | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | Chr1:36037867-36037886 | MsG0180002270.01.T01:CDS | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | Chr1:36037872-36037891 | MsG0180002270.01.T01:CDS | 25.0% |
| AAAACAGTCATCAATGAACT+TGG | - | Chr1:36037797-36037816 | None:intergenic | 30.0% | |
| TCAAATACAATCCAGTTTAC+AGG | + | Chr1:36037635-36037654 | MsG0180002270.01.T01:CDS | 30.0% | |
| TTTCCATTATGAACAAAGAC+AGG | - | Chr1:36037667-36037686 | None:intergenic | 30.0% | |
| TTTGAACTCTAATGACAAAC+GGG | - | Chr1:36037543-36037562 | None:intergenic | 30.0% | |
| ! | CAAGTTACCCAATTTTTCTT+CGG | - | Chr1:36037602-36037621 | None:intergenic | 30.0% |
| !! | ACTGTTTTATCTTGGTTTTC+GGG | + | Chr1:36037809-36037828 | MsG0180002270.01.T01:CDS | 30.0% |
| !! | CATTGATGACTGTTTTATCT+TGG | + | Chr1:36037801-36037820 | MsG0180002270.01.T01:CDS | 30.0% |
| !! | GACTGTTTTATCTTGGTTTT+CGG | + | Chr1:36037808-36037827 | MsG0180002270.01.T01:CDS | 30.0% |
| ATACAATCCAGTTTACAGGA+TGG | + | Chr1:36037639-36037658 | MsG0180002270.01.T01:CDS | 35.0% | |
| GCTCTTTGATAAGGATCATT+CGG | - | Chr1:36037757-36037776 | None:intergenic | 35.0% | |
| GTTCCTGTCTTTGTTCATAA+TGG | + | Chr1:36037661-36037680 | MsG0180002270.01.T01:CDS | 35.0% | |
| TAAGGATCATTCGGTAAGAT+TGG | - | Chr1:36037748-36037767 | None:intergenic | 35.0% | |
| TACGTTTGAACCTTTCAAAC+CGG | + | Chr1:36037846-36037865 | MsG0180002270.01.T01:CDS | 35.0% | |
| TGATCCTTATCAAAGAGCTT+TGG | + | Chr1:36037759-36037778 | MsG0180002270.01.T01:CDS | 35.0% | |
| ! | TCATAATGGAAATCCCATCT+CGG | + | Chr1:36037675-36037694 | MsG0180002270.01.T01:CDS | 35.0% |
| !! | TAAGATATCACCGGTTTGAA+AGG | - | Chr1:36037859-36037878 | None:intergenic | 35.0% |
| CAAATTGCGCTGGAATTGAA+GGG | + | Chr1:36037559-36037578 | MsG0180002270.01.T01:CDS | 40.0% | |
| CATTAGAGTTCAAATTGCGC+TGG | + | Chr1:36037549-36037568 | MsG0180002270.01.T01:CDS | 40.0% | |
| TCAAATTGCGCTGGAATTGA+AGG | + | Chr1:36037558-36037577 | MsG0180002270.01.T01:CDS | 40.0% | |
| TTGAGTACATCGATGAGACT+TGG | + | Chr1:36037713-36037732 | MsG0180002270.01.T01:CDS | 40.0% | |
| TTGCAACACTCTCTTGACTT+TGG | - | Chr1:36037461-36037480 | None:intergenic | 40.0% | |
| !! | AAAGTCAAGAGAGTGTTGCA+AGG | + | Chr1:36037460-36037479 | MsG0180002270.01.T01:CDS | 40.0% |
| !!! | GTGAAGCTTTTAGGTTCTGT+GGG | + | Chr1:36037514-36037533 | MsG0180002270.01.T01:CDS | 40.0% |
| ACAGGAACCATCCTGTAAAC+TGG | - | Chr1:36037649-36037668 | None:intergenic | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | Chr1:36037904-36037923 | MsG0180002270.01.T01:CDS | 45.0% | |
| CGAGCCAAAGCTCTTTGATA+AGG | - | Chr1:36037766-36037785 | None:intergenic | 45.0% | |
| ! | AAAGAGCTTTGGCTCGTTTC+TGG | + | Chr1:36037770-36037789 | MsG0180002270.01.T01:CDS | 45.0% |
| ! | AAGAGCTTTGGCTCGTTTCT+GGG | + | Chr1:36037771-36037790 | MsG0180002270.01.T01:CDS | 45.0% |
| ! | GCAGAAGAGGTGAAGCTTTT+AGG | + | Chr1:36037505-36037524 | MsG0180002270.01.T01:CDS | 45.0% |
| !! | AAGAGAGTGTTGCAAGGCTA+TGG | + | Chr1:36037466-36037485 | MsG0180002270.01.T01:CDS | 45.0% |
| !!! | GGTGAAGCTTTTAGGTTCTG+TGG | + | Chr1:36037513-36037532 | MsG0180002270.01.T01:CDS | 45.0% |
| AACCCTTGAGAATCGAGGTC+CGG | + | Chr1:36037909-36037928 | MsG0180002270.01.T01:CDS | 50.0% | |
| AATCACACGAGACTCCGAGA+TGG | - | Chr1:36037692-36037711 | None:intergenic | 50.0% | |
| ATCACACGAGACTCCGAGAT+GGG | - | Chr1:36037691-36037710 | None:intergenic | 50.0% | |
| GATTGCTGCATCTGCAGAAG+AGG | + | Chr1:36037492-36037511 | MsG0180002270.01.T01:CDS | 50.0% | |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | Chr1:36037932-36037951 | MsG0180002270.01.T01:CDS | 50.0% |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | Chr1:36037927-36037946 | MsG0180002270.01.T01:CDS | 50.0% |
| ACCCTTGAGAATCGAGGTCC+GGG | + | Chr1:36037910-36037929 | MsG0180002270.01.T01:CDS | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | Chr1:36037931-36037950 | None:intergenic | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | Chr1:36037914-36037933 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | Chr1:36037928-36037947 | MsG0180002270.01.T01:CDS | 55.0% |
| CTCCCGGACCTCGATTCTCA+AGG | - | Chr1:36037915-36037934 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 36037439 | 36037960 | 36037439 | ID=MsG0180002270.01;Name=MsG0180002270.01 |
| Chr1 | mRNA | 36037439 | 36037960 | 36037439 | ID=MsG0180002270.01.T01;Parent=MsG0180002270.01;Name=MsG0180002270.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|173 |
| Chr1 | exon | 36037439 | 36037960 | 36037439 | ID=MsG0180002270.01.T01:exon:3281;Parent=MsG0180002270.01.T01 |
| Chr1 | CDS | 36037439 | 36037960 | 36037439 | ID=MsG0180002270.01.T01:cds;Parent=MsG0180002270.01.T01 |
| Gene Sequence |
| Protein sequence |
